메뉴 건너뛰기




Volumn 539, Issue 1, 2014, Pages 82-90

Ensemble docking and molecular dynamics identify knoevenagel curcumin derivatives with potent anti-EGFR activity

Author keywords

Curcumin; EGFR; Ensemble docking; Molecular dynamics; Tyrosine kinase

Indexed keywords

CURCUMIN; EGFR; ENSEMBLE DOCKING; MOLECULAR DYNAMICS; TYROSINE KINASE;

EID: 84894312360     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2014.01.056     Document Type: Article
Times cited : (64)

References (41)
  • 2
    • 77957191467 scopus 로고    scopus 로고
    • Curcumin and its analogues: potential anticancer agents
    • Agrawal D.K., Mishra P.K. Curcumin and its analogues: potential anticancer agents. Med. Res. Rev. 2010, 30:818-860.
    • (2010) Med. Res. Rev. , vol.30 , pp. 818-860
    • Agrawal, D.K.1    Mishra, P.K.2
  • 3
    • 84884847948 scopus 로고    scopus 로고
    • Synthesis, characterisation, and in vitro anticancer activity of curcumin analogues bearing pyrazole/pyrimidine ring targeting EGFR tyrosine kinase
    • Ahsan M.J., Khalilullah H., Yasmin S., Jadav S.S., Govindasamy J. Synthesis, characterisation, and in vitro anticancer activity of curcumin analogues bearing pyrazole/pyrimidine ring targeting EGFR tyrosine kinase. Biomed. Res. Int. 2013, 2013:239354.
    • (2013) Biomed. Res. Int. , vol.2013 , pp. 239354
    • Ahsan, M.J.1    Khalilullah, H.2    Yasmin, S.3    Jadav, S.S.4    Govindasamy, J.5
  • 4
    • 0041989751 scopus 로고    scopus 로고
    • CASTp: computed atlas of surface topography of proteins
    • Binkowski T.A., Naghibzadeh S., Liang J. CASTp: computed atlas of surface topography of proteins. Nucleic Acids Res. 2003, 31:3352-3355.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3352-3355
    • Binkowski, T.A.1    Naghibzadeh, S.2    Liang, J.3
  • 5
    • 23444454552 scopus 로고    scopus 로고
    • The Amber biomolecular simulation programs
    • Case D.A., et al. The Amber biomolecular simulation programs. J. Comput. Chem. 2005, 26:1668-1688.
    • (2005) J. Comput. Chem. , vol.26 , pp. 1668-1688
    • Case, D.A.1
  • 6
    • 14644436385 scopus 로고    scopus 로고
    • Biodiversity: a continuing source of novel drug leads
    • Cragg G.M., Newman D.J. Biodiversity: a continuing source of novel drug leads. Pure Appl. Chem. 2005, 77:7-24.
    • (2005) Pure Appl. Chem. , vol.77 , pp. 7-24
    • Cragg, G.M.1    Newman, D.J.2
  • 7
    • 0038275923 scopus 로고    scopus 로고
    • Lead times and overdetection due to prostate-specific antigen screening: estimates from the European Randomized Study of Screening for Prostate Cancer
    • Draisma G., et al. Lead times and overdetection due to prostate-specific antigen screening: estimates from the European Randomized Study of Screening for Prostate Cancer. J. Natl. Cancer Inst. 2003, 95:868-878.
    • (2003) J. Natl. Cancer Inst. , vol.95 , pp. 868-878
    • Draisma, G.1
  • 8
    • 39149098194 scopus 로고    scopus 로고
    • Natural products as leads to anticancer drugs
    • Gordaliza M. Natural products as leads to anticancer drugs. Clin. Transl. Oncol. 2007, 9:767-776.
    • (2007) Clin. Transl. Oncol. , vol.9 , pp. 767-776
    • Gordaliza, M.1
  • 9
    • 33846034078 scopus 로고    scopus 로고
    • Synthesis of novel curcumin analogues and their evaluation as selective cyclooxygenase-1 (COX-1) inhibitors
    • Handler N., Jaeger W., Puschacher H., Leisser K., Erker T. Synthesis of novel curcumin analogues and their evaluation as selective cyclooxygenase-1 (COX-1) inhibitors. Chem. Pharm. Bull. 2007, 55:64-71.
    • (2007) Chem. Pharm. Bull. , vol.55 , pp. 64-71
    • Handler, N.1    Jaeger, W.2    Puschacher, H.3    Leisser, K.4    Erker, T.5
  • 10
    • 1342323632 scopus 로고    scopus 로고
    • ErbB receptors: directing key signaling networks throughout life
    • Holbro T., Hynes N.E. ErbB receptors: directing key signaling networks throughout life. Annu. Rev. Pharmacol. Toxicol. 2004, 44:195-217.
    • (2004) Annu. Rev. Pharmacol. Toxicol. , vol.44 , pp. 195-217
    • Holbro, T.1    Hynes, N.E.2
  • 12
    • 0036836671 scopus 로고    scopus 로고
    • Antitumor agents. Part 214: synthesis and evaluation of curcumin analogues as cytotoxic agents
    • Ishida J., et al. Antitumor agents. Part 214: synthesis and evaluation of curcumin analogues as cytotoxic agents. Bioorg. Med. Chem. 2002, 10:3481-3487.
    • (2002) Bioorg. Med. Chem. , vol.10 , pp. 3481-3487
    • Ishida, J.1
  • 13
    • 84865980048 scopus 로고    scopus 로고
    • Mechanistic insights into PEPT1-mediated transport of a novel antiepileptic, NP-647
    • Khomane K.S., et al. Mechanistic insights into PEPT1-mediated transport of a novel antiepileptic, NP-647. Mol. Pharm. 2012, 9:2458-2468.
    • (2012) Mol. Pharm. , vol.9 , pp. 2458-2468
    • Khomane, K.S.1
  • 14
    • 0031581852 scopus 로고    scopus 로고
    • Molecular docking to ensembles of protein structures
    • Knegtel R.M.A., Kuntz I.D., Oshiro C.M. Molecular docking to ensembles of protein structures. J. Mol. Biol. 1997, 266:424-440.
    • (1997) J. Mol. Biol. , vol.266 , pp. 424-440
    • Knegtel, R.M.A.1    Kuntz, I.D.2    Oshiro, C.M.3
  • 15
    • 0028556758 scopus 로고
    • Inhibitory effect of curcumin on epidermal growth factor receptor kinase activity in A431 cells
    • Korutla L., Kumar R. Inhibitory effect of curcumin on epidermal growth factor receptor kinase activity in A431 cells. Biochim. Biophys. Acta (BBA) Mol. Cell Res. 1994, 1224:597-600.
    • (1994) Biochim. Biophys. Acta (BBA) Mol. Cell Res. , vol.1224 , pp. 597-600
    • Korutla, L.1    Kumar, R.2
  • 17
    • 84876560772 scopus 로고    scopus 로고
    • NPACT: naturally occurring plant-based anti-cancer compound-activity-target database
    • Mangal M., Sagar P., Singh H., Raghava G.P.S., Agarwal S.M. NPACT: naturally occurring plant-based anti-cancer compound-activity-target database. Nucleic Acids Res. 2013, 41:D1124-D1129.
    • (2013) Nucleic Acids Res. , vol.41
    • Mangal, M.1    Sagar, P.2    Singh, H.3    Raghava, G.P.S.4    Agarwal, S.M.5
  • 18
    • 80052028983 scopus 로고    scopus 로고
    • Potential applications of curcumin and its novel synthetic analogs and nanotechnology-based formulations in cancer prevention and therapy
    • Mimeault M., Batra S.K. Potential applications of curcumin and its novel synthetic analogs and nanotechnology-based formulations in cancer prevention and therapy. Chin. Med. 2011, 6:31.
    • (2011) Chin. Med. , vol.6 , pp. 31
    • Mimeault, M.1    Batra, S.K.2
  • 19
    • 40949164269 scopus 로고    scopus 로고
    • Synthesis and exploration of novel curcumin analogues as anti-malarial agents
    • Mishra S., Karmodiya K., Surolia N., Surolia A. Synthesis and exploration of novel curcumin analogues as anti-malarial agents. Bioorg. Med. Chem. 2008, 16:2894-2902.
    • (2008) Bioorg. Med. Chem. , vol.16 , pp. 2894-2902
    • Mishra, S.1    Karmodiya, K.2    Surolia, N.3    Surolia, A.4
  • 20
    • 48149099777 scopus 로고    scopus 로고
    • Curcumin derived pyrazoles and isoxazoles: Swiss Army knives or blunt tools for Alzheimer's disease?
    • Narlawar R., et al. Curcumin derived pyrazoles and isoxazoles: Swiss Army knives or blunt tools for Alzheimer's disease?. ChemMedChem 2007, 3:165-172.
    • (2007) ChemMedChem , vol.3 , pp. 165-172
    • Narlawar, R.1
  • 21
    • 33750489699 scopus 로고    scopus 로고
    • Synthesis and biological analysis of new curcumin analogues bearing an enhanced potential for the medicinal treatment of cancer
    • Ohori H., et al. Synthesis and biological analysis of new curcumin analogues bearing an enhanced potential for the medicinal treatment of cancer. Mol. Cancer Ther. 2006, 5:2563-2571.
    • (2006) Mol. Cancer Ther. , vol.5 , pp. 2563-2571
    • Ohori, H.1
  • 22
    • 0037038324 scopus 로고    scopus 로고
    • Antitumor agents. 217. Curcumin analogues as novel androgen receptor antagonists with potential as anti-prostate cancer agents
    • Ohtsu H., et al. Antitumor agents. 217. Curcumin analogues as novel androgen receptor antagonists with potential as anti-prostate cancer agents. J. Med. Chem. 2002, 45:5037-5042.
    • (2002) J. Med. Chem. , vol.45 , pp. 5037-5042
    • Ohtsu, H.1
  • 23
    • 84865977079 scopus 로고    scopus 로고
    • University of California, San Francisco
    • Paesani F., et al. AMBER 10 2008, University of California, San Francisco.
    • (2008) AMBER 10
    • Paesani, F.1
  • 25
    • 27144529488 scopus 로고    scopus 로고
    • Curcumin derivatives inhibit the formation of Jun-Fos-DNA complex independently of their conserved cysteine residues
    • Park C.H., Lee J.H., Yang C.H. Curcumin derivatives inhibit the formation of Jun-Fos-DNA complex independently of their conserved cysteine residues. J. Biochem. Mol. Biol. 2005, 38:474.
    • (2005) J. Biochem. Mol. Biol. , vol.38 , pp. 474
    • Park, C.H.1    Lee, J.H.2    Yang, C.H.3
  • 26
    • 35148850631 scopus 로고    scopus 로고
    • The antitumor activities of curcumin and of its isoxazole analogue are not affected by multiple gene expression changes in an MDR model of the MCF-7 breast cancer cell line: analysis of the possible molecular basis
    • Poma P., et al. The antitumor activities of curcumin and of its isoxazole analogue are not affected by multiple gene expression changes in an MDR model of the MCF-7 breast cancer cell line: analysis of the possible molecular basis. Int. J. Mol. Med. 2007, 20:329.
    • (2007) Int. J. Mol. Med. , vol.20 , pp. 329
    • Poma, P.1
  • 27
    • 84879501878 scopus 로고    scopus 로고
    • Chem-bioinformatics and in vitro approaches for candidate optimization: a case study of NSC745689 as a promising antitumor agent
    • Nandekar Prajwal P., et al. Chem-bioinformatics and in vitro approaches for candidate optimization: a case study of NSC745689 as a promising antitumor agent. Med. Chem. Res. 2013, 22:3728-3742.
    • (2013) Med. Chem. Res. , vol.22 , pp. 3728-3742
    • Nandekar, P.P.1
  • 28
    • 84881372875 scopus 로고    scopus 로고
    • Exploring pyrimidine-substituted curcumin analogues: design, synthesis and effects on EGFR signaling
    • Qiu P., et al. Exploring pyrimidine-substituted curcumin analogues: design, synthesis and effects on EGFR signaling. Bioorg. Med. Chem. 2013, 21:5012-5020.
    • (2013) Bioorg. Med. Chem. , vol.21 , pp. 5012-5020
    • Qiu, P.1
  • 29
    • 78649893567 scopus 로고    scopus 로고
    • Synthesis and identification of new 4-arylidene curcumin analogues as potential anticancer agents targeting nuclear factor-kappaB signaling pathway
    • Qiu X., et al. Synthesis and identification of new 4-arylidene curcumin analogues as potential anticancer agents targeting nuclear factor-kappaB signaling pathway. J. Med. Chem. 2010, 53:8260-8273.
    • (2010) J. Med. Chem. , vol.53 , pp. 8260-8273
    • Qiu, X.1
  • 30
    • 84883293448 scopus 로고    scopus 로고
    • Structural investigation of deleterious non-synonymous SNPs of EGFR gene
    • Raghav D., Sharma V., Agarwal S.M. Structural investigation of deleterious non-synonymous SNPs of EGFR gene. Interdiscip. Sci. 2013, 5:60-68.
    • (2013) Interdiscip. Sci. , vol.5 , pp. 60-68
    • Raghav, D.1    Sharma, V.2    Agarwal, S.M.3
  • 31
    • 15044362170 scopus 로고    scopus 로고
    • Design, synthesis, biological evaluation and molecular docking of curcumin analogues as antioxidant, cyclooxygenase inhibitory and anti-inflammatory agents
    • Selvam C., Jachak S.M., Thilagavathi R., Chakraborti A.K. Design, synthesis, biological evaluation and molecular docking of curcumin analogues as antioxidant, cyclooxygenase inhibitory and anti-inflammatory agents. Bioorg. Med. Chem. Lett. 2005, 15:1793-1797.
    • (2005) Bioorg. Med. Chem. Lett. , vol.15 , pp. 1793-1797
    • Selvam, C.1    Jachak, S.M.2    Thilagavathi, R.3    Chakraborti, A.K.4
  • 32
    • 0141599428 scopus 로고    scopus 로고
    • Structure of the epidermal growth factor receptor kinase domain alone and in complex with a 4-anilinoquinazoline inhibitor
    • Stamos J., Sliwkowski M.X., Eigenbrot C. Structure of the epidermal growth factor receptor kinase domain alone and in complex with a 4-anilinoquinazoline inhibitor. J. Biol. Chem. 2002, 277:46265-46272.
    • (2002) J. Biol. Chem. , vol.277 , pp. 46265-46272
    • Stamos, J.1    Sliwkowski, M.X.2    Eigenbrot, C.3
  • 33
    • 19044369667 scopus 로고    scopus 로고
    • Hydrazinocurcumin, a novel synthetic curcumin derivative, is a potent inhibitor of endothelial cell proliferation
    • Sup Shim J., et al. Hydrazinocurcumin, a novel synthetic curcumin derivative, is a potent inhibitor of endothelial cell proliferation. Bioorg. Med. Chem. 2002, 10:2439-2444.
    • (2002) Bioorg. Med. Chem. , vol.10 , pp. 2439-2444
    • Sup Shim, J.1
  • 34
    • 0347949637 scopus 로고    scopus 로고
    • Revisiting free energy calculations: a theoretical connection to MM/PBSA and direct calculation of the association free energy
    • Swanson J.M.J., Henchman R.H., McCammon J.A. Revisiting free energy calculations: a theoretical connection to MM/PBSA and direct calculation of the association free energy. Biophys. J. 2004, 86:67-74.
    • (2004) Biophys. J. , vol.86 , pp. 67-74
    • Swanson, J.M.J.1    Henchman, R.H.2    McCammon, J.A.3
  • 35
    • 84875397668 scopus 로고    scopus 로고
    • Perspectives on new synthetic curcumin analogs and their potential anticancer properties
    • Vyas A., Dandawate P., Padhye S., Ahmad A., Sarkar F. Perspectives on new synthetic curcumin analogs and their potential anticancer properties. Curr. Pharm. Des. 2013, 19:2047-2069.
    • (2013) Curr. Pharm. Des. , vol.19 , pp. 2047-2069
    • Vyas, A.1    Dandawate, P.2    Padhye, S.3    Ahmad, A.4    Sarkar, F.5
  • 36
    • 0028922586 scopus 로고
    • LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions
    • Wallace A.C., Laskowski R.A., Thornton J.M. LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng. 1995, 8:127-134.
    • (1995) Protein Eng. , vol.8 , pp. 127-134
    • Wallace, A.C.1    Laskowski, R.A.2    Thornton, J.M.3
  • 37
    • 84871631060 scopus 로고    scopus 로고
    • Design, synthesis and molecular docking of α, β-unsaturated cyclohexanone analogous of curcumin as potent EGFR inhibitors with antiproliferative activity
    • Xu Y.-Y., Cao Y., Ma H., Li H.-Q., Ao G.-Z. Design, synthesis and molecular docking of α, β-unsaturated cyclohexanone analogous of curcumin as potent EGFR inhibitors with antiproliferative activity. Bioorg. Med. Chem. 2013, 21:388-394.
    • (2013) Bioorg. Med. Chem. , vol.21 , pp. 388-394
    • Xu, Y.-Y.1    Cao, Y.2    Ma, H.3    Li, H.-Q.4    Ao, G.-Z.5
  • 39
    • 84858951714 scopus 로고    scopus 로고
    • Curcumin: updated molecular mechanisms and intervention targets in human lung cancer
    • Ye M.X., Li Y., Yin H., Zhang J. Curcumin: updated molecular mechanisms and intervention targets in human lung cancer. Int. J. Mol. Sci. 2012, 13:3959-3978.
    • (2012) Int. J. Mol. Sci. , vol.13 , pp. 3959-3978
    • Ye, M.X.1    Li, Y.2    Yin, H.3    Zhang, J.4
  • 40
    • 33847406095 scopus 로고    scopus 로고
    • Structures of lung cancer-derived EGFR mutants and inhibitor complexes: mechanism of activation and insights into differential inhibitor sensitivity
    • Yun C.H., et al. Structures of lung cancer-derived EGFR mutants and inhibitor complexes: mechanism of activation and insights into differential inhibitor sensitivity. Cancer Cell 2007, 11:217-227.
    • (2007) Cancer Cell , vol.11 , pp. 217-227
    • Yun, C.H.1
  • 41
    • 84865800786 scopus 로고    scopus 로고
    • Synthesis, cytotoxicity of new 4-arylidene curcumin analogues and their multi-functions in inhibition of both NF-kappaB and Akt signalling
    • Zuo Y., et al. Synthesis, cytotoxicity of new 4-arylidene curcumin analogues and their multi-functions in inhibition of both NF-kappaB and Akt signalling. Eur. J. Med. Chem. 2012, 55:346-357.
    • (2012) Eur. J. Med. Chem. , vol.55 , pp. 346-357
    • Zuo, Y.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.