SCOPUS 정보 검색 플랫폼

Methods

Volumn 65, Issue 3, 2014, Pages 333-341

Production of pure and functional RNA for in vitro reconstitution experiments

(3) Edelmann, Franziska Theresia a Niedner, Annika a Niessing, Dierk a

a INSTITUTE OF EPIDEMIOLOGY (Germany)

Author keywords

RNA; RNA folding; RNA purification; RNA quality; RNA protein interactions; RNP reconstitution

Indexed keywords

RNA; RNA FOLDING; RNA PURIFICATION; RNA QUALITY; RNA-PROTEIN INTERACTIONS; RNP RECONSTITUTION;

MOLECULAR BIOLOGY; NUCLEIC ACID CONFORMATION; RIBONUCLEOPROTEINS; RNA STABILITY; RNA, TRANSFER; RNA-BINDING PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION, GENETIC;

EID: 84894267646 PISSN: 10462023 EISSN: 10959130 Source Type: Journal
DOI: 10.1016/j.ymeth.2013.08.034 Document Type: Article

Times cited : (31)

References (72)

1
- 0000998426
- Kornberg A. Science 1960, 131:1503-1508.
- (1960) Science , vol.131 , pp. 1503-1508
- Kornberg, A.¹

2
- 0004952211
- Higgins N.P., Peebles C.L., Sugino A., Cozzarelli N.R. Proc. Natl. Acad. Sci. USA 1978, 75:1773-1777.
- (1978) Proc. Natl. Acad. Sci. USA , vol.75 , pp. 1773-1777
- Higgins, N.P.¹ Peebles, C.L.² Sugino, A.³ Cozzarelli, N.R.⁴

3
- 38449123748
- Pisarev A.V., Unbehaun A., Hellen C.U., Pestova T.V. Methods Enzymol. 2007, 430:147-177.
- (2007) Methods Enzymol. , vol.430 , pp. 147-177
- Pisarev, A.V.¹ Unbehaun, A.² Hellen, C.U.³ Pestova, T.V.⁴

4
- 0003903343
- Cold Spring Harbor Laboratory Press, Cold Spring Harbor
- Sambrook J., Russell D.W. Molecular Cloning: A Laboratory Manual 2001, Cold Spring Harbor Laboratory Press, Cold Spring Harbor. 3rd ed.
- (2001) Molecular Cloning: A Laboratory Manual
- Sambrook, J.¹ Russell, D.W.²

5
- 73249115808
- Graebsch A., Roche S., Niessing D. Proc. Natl. Acad. Sci. USA 2009, 106:18521-18526.
- (2009) Proc. Natl. Acad. Sci. USA , vol.106 , pp. 18521-18526
- Graebsch, A.¹ Roche, S.² Niessing, D.³

6
- 0027488624
- Bartel D.P., Szostak J.W. Science 1993, 261:1411-1418.
- (1993) Science , vol.261 , pp. 1411-1418
- Bartel, D.P.¹ Szostak, J.W.²

7
- 0023583232
- Wallace D.M. Methods Enzymol. 1987, 152:41-48.
- (1987) Methods Enzymol. , vol.152 , pp. 41-48
- Wallace, D.M.¹

8
- 0029258928
- Uhlenbeck O.C. RNA 1995, 1:4-6.
- (1995) RNA , vol.1 , pp. 4-6
- Uhlenbeck, O.C.¹

9
- 0003925330
- Oxford University Press, Oxford
- Smith C.W.J. RNA: Protein Interactions - A Practical Approach 1998, Oxford University Press, Oxford.
- (1998) RNA: Protein Interactions - A Practical Approach
- Smith, C.W.J.¹

10
- 0023651444
- Milligan J.F., Groebe D.R., Witherell G.W., Uhlenbeck O.C. Nucleic Acids Res. 1987, 15:8783-8798.
- (1987) Nucleic Acids Res. , vol.15 , pp. 8783-8798
- Milligan, J.F.¹ Groebe, D.R.² Witherell, G.W.³ Uhlenbeck, O.C.⁴

11
- 0029020003
- Price S.R., Ito N., Oubridge C., Avis J.M., Nagai K. J. Mol. Biol. 1995, 249:398-408.
- (1995) J. Mol. Biol. , vol.249 , pp. 398-408
- Price, S.R.¹ Ito, N.² Oubridge, C.³ Avis, J.M.⁴ Nagai, K.⁵

12
- 0029919746
- Ferre-D'Amare A.R., Doudna J.A. Nucleic Acids Res. 1996, 24:977-978.
- (1996) Nucleic Acids Res. , vol.24 , pp. 977-978
- Ferre-D'Amare, A.R.¹ Doudna, J.A.²

13
- 84934444641
- Cheong H.K., Hwang E., Cheong C. Methods Mol. Biol. 2012, 941:113-121.
- (2012) Methods Mol. Biol. , vol.941 , pp. 113-121
- Cheong, H.K.¹ Hwang, E.² Cheong, C.³

14
- 84879323584
- Salvail-Lacoste A., Di Tomasso G., Piette B.L., Legault P. RNA 2013, 19:1003-1014.
- (2013) RNA , vol.19 , pp. 1003-1014
- Salvail-Lacoste, A.¹ Di Tomasso, G.² Piette, B.L.³ Legault, P.⁴

15
- 2442638925
- Kieft J.S., Batey R.T. RNA 2004, 10:988-995.
- (2004) RNA , vol.10 , pp. 988-995
- Kieft, J.S.¹ Batey, R.T.²

16
- 34447527363
- Batey R.T., Kieft J.S. RNA 2007, 13:1384-1389.
- (2007) RNA , vol.13 , pp. 1384-1389
- Batey, R.T.¹ Kieft, J.S.²

17
- 79951569027
- Keel A.Y., Easton L.E., Lukavsky P.J., Kieft J.S. Methods Enzymol. 2009, 469:3-25.
- (2009) Methods Enzymol. , vol.469 , pp. 3-25
- Keel, A.Y.¹ Easton, L.E.² Lukavsky, P.J.³ Kieft, J.S.⁴

18
- 79951574779
- Di Tomasso G., Lampron P., Dagenais P., Omichinski J.G., Legault P. Nucleic Acids Res. 2011, 39:e18.
- (2011) Nucleic Acids Res. , vol.39
- Di Tomasso, G.¹ Lampron, P.² Dagenais, P.³ Omichinski, J.G.⁴ Legault, P.⁵

19
- 2942558637
- Marshall W.S., Kaiser R.J. Curr. Opin. Chem. Biol. 2004, 8:222-229.
- (2004) Curr. Opin. Chem. Biol. , vol.8 , pp. 222-229
- Marshall, W.S.¹ Kaiser, R.J.²

20
- 34547659860
- Ponchon L., Dardel F. Nat. Methods 2007, 4:571-576.
- (2007) Nat. Methods , vol.4 , pp. 571-576
- Ponchon, L.¹ Dardel, F.²

21
- 66749152587
- Ponchon L., Beauvais G., Nonin-Lecomte S., Dardel F. Nat. Protoc. 2009, 4:947-959.
- (2009) Nat. Protoc. , vol.4 , pp. 947-959
- Ponchon, L.¹ Beauvais, G.² Nonin-Lecomte, S.³ Dardel, F.⁴

22
- 32644435694
- Deutscher M.P. Nucleic Acids Res. 2006, 34:659-666.
- (2006) Nucleic Acids Res. , vol.34 , pp. 659-666
- Deutscher, M.P.¹

23
- 0036500552
- Li Z., Reimers S., Pandit S., Deutscher M.P. EMBO J. 2002, 21:1132-1138.
- (2002) EMBO J. , vol.21 , pp. 1132-1138
- Li, Z.¹ Reimers, S.² Pandit, S.³ Deutscher, M.P.⁴

24
- 79955517599
- Müller M., Heym R.G., Mayer A., Kramer K., Schmid M., Cramer P., Urlaub H., Jansen R.P., Niessing D. PLoS Biol. 2011, 9:e1000611.
- (2011) PLoS Biol. , vol.9
- Müller, M.¹ Heym, R.G.² Mayer, A.³ Kramer, K.⁴ Schmid, M.⁵ Cramer, P.⁶ Urlaub, H.⁷ Jansen, R.P.⁸ Niessing, D.⁹

25
- 84883480063
- Ponchon L., Catala M., Seijo B., El Khouri M., Dardel F., Nonin-Lecomte S., Tisne C. Nucleic Acids Res. 2013, 41:e150.
- (2013) Nucleic Acids Res. , vol.41
- Ponchon, L.¹ Catala, M.² Seijo, B.³ El Khouri, M.⁴ Dardel, F.⁵ Nonin-Lecomte, S.⁶ Tisne, C.⁷

26
- 84934437053
- Ponchon L., Beauvais G., Nonin-Lecomte S., Dardel F. Methods Mol. Biol. 2012, 941:9-18.
- (2012) Methods Mol. Biol. , vol.941 , pp. 9-18
- Ponchon, L.¹ Beauvais, G.² Nonin-Lecomte, S.³ Dardel, F.⁴

27
- 84864474486
- Nelissen F.H., Leunissen E.H., van de Laar L., Tessari M., Heus H.A., Wijmenga S.S. Nucleic Acids Res. 2012, 40:e102.
- (2012) Nucleic Acids Res. , vol.40
- Nelissen, F.H.¹ Leunissen, E.H.² van de Laar, L.³ Tessari, M.⁴ Heus, H.A.⁵ Wijmenga, S.S.⁶

28
- 77955289619
- Liu Y., Stepanov V.G., Strych U., Willson R.C., Jackson G.W., Fox G.E. BMC Biotechnol. 2010, 10:85.
- (2010) BMC Biotechnol. , vol.10 , pp. 85
- Liu, Y.¹ Stepanov, V.G.² Strych, U.³ Willson, R.C.⁴ Jackson, G.W.⁵ Fox, G.E.⁶

29
- 63449140909
- Zhang X., Potty A.S., Jackson G.W., Stepanov V., Tang A., Liu Y., Kourentzi K., Strych U., Fox G.E., Willson R.C. JMR 2009, 22:154-161.
- (2009) JMR , vol.22 , pp. 154-161
- Zhang, X.¹ Potty, A.S.² Jackson, G.W.³ Stepanov, V.⁴ Tang, A.⁵ Liu, Y.⁶ Kourentzi, K.⁷ Strych, U.⁸ Fox, G.E.⁹ Willson, R.C.¹⁰

30
- 0030163814
- Hengen P.N. Trends Biochem. Sci. 1996, 21:224-225.
- (1996) Trends Biochem. Sci. , vol.21 , pp. 224-225
- Hengen, P.N.¹

31
- 0013614320
- Barlow J.J., Mathias A.P., Williamson R., Gammack D.B. Biochem. Biophys. Res. Commun. 1963, 13:61-66.
- (1963) Biochem. Biophys. Res. Commun. , vol.13 , pp. 61-66
- Barlow, J.J.¹ Mathias, A.P.² Williamson, R.³ Gammack, D.B.⁴

32
- 0020949591
- Cathala G., Savouret J.F., Mendez B., West B.L., Karin M., Martial J.A., Baxter J.D. DNA 1983, 2:329-335.
- (1983) DNA , vol.2 , pp. 329-335
- Cathala, G.¹ Savouret, J.F.² Mendez, B.³ West, B.L.⁴ Karin, M.⁵ Martial, J.A.⁶ Baxter, J.D.⁷

33
- 0025021505
- Cathala G., Brunel C. Nucleic Acids Res. 1990, 18:201.
- (1990) Nucleic Acids Res. , vol.18 , pp. 201
- Cathala, G.¹ Brunel, C.²

34
- 0025848932
- Jahn M.J., Jahn D., Kumar A.M., Soll D. Nucleic Acids Res. 1991, 19:2786.
- (1991) Nucleic Acids Res. , vol.19 , pp. 2786
- Jahn, M.J.¹ Jahn, D.² Kumar, A.M.³ Soll, D.⁴

35
- 84884677702
- [epub ahead of print]
- Koubek J., Lin K.F., Chen Y.R., Cheng R.P., Huang J.J. RNA 2013, [epub ahead of print]. 10.1261/rna.038117.113.
- (2013) RNA
- Koubek, J.¹ Lin, K.F.² Chen, Y.R.³ Cheng, R.P.⁴ Huang, J.J.⁵

36
- 0032855035
- Shields T.P., Mollova E., Ste Marie L., Hansen M.R., Pardi A. RNA 1999, 5:1259-1267.
- (1999) RNA , vol.5 , pp. 1259-1267
- Shields, T.P.¹ Mollova, E.² Ste Marie, L.³ Hansen, M.R.⁴ Pardi, A.⁵

37
- 78651286184
- Duss O., Maris C., von Schroetter C., Allain F.H. Nucleic Acids Res. 2010, 38:e188.
- (2010) Nucleic Acids Res. , vol.38
- Duss, O.¹ Maris, C.² von Schroetter, C.³ Allain, F.H.⁴

38
- 77149143215
- Easton L.E., Shibata Y., Lukavsky P.J. RNA 2010, 16:647-653.
- (2010) RNA , vol.16 , pp. 647-653
- Easton, L.E.¹ Shibata, Y.² Lukavsky, P.J.³

39
- 1942501609
- Lukavsky P.J., Puglisi J.D. RNA 2004, 10:889-893.
- (2004) RNA , vol.10 , pp. 889-893
- Lukavsky, P.J.¹ Puglisi, J.D.²

40
- 39149123507
- McKenna S.A., Kim I., Puglisi E.V., Lindhout D.A., Aitken C.E., Marshall R.A., Puglisi J.D. Nat. Protoc. 2007, 2:3270-3277.
- (2007) Nat. Protoc. , vol.2 , pp. 3270-3277
- McKenna, S.A.¹ Kim, I.² Puglisi, E.V.³ Lindhout, D.A.⁴ Aitken, C.E.⁵ Marshall, R.A.⁶ Puglisi, J.D.⁷

41
- 33846446409
- Kim I., McKenna S.A., Viani Puglisi E., Puglisi J.D. RNA 2007, 13:289-294.
- (2007) RNA , vol.13 , pp. 289-294
- Kim, I.¹ McKenna, S.A.² Viani Puglisi, E.³ Puglisi, J.D.⁴

42
- 0037155223
- Paillart J.C., Skripkin E., Ehresmann B., Ehresmann C., Marquet R. J. Biol. Chem. 2002, 277:5995-6004.
- (2002) J. Biol. Chem. , vol.277 , pp. 5995-6004
- Paillart, J.C.¹ Skripkin, E.² Ehresmann, B.³ Ehresmann, C.⁴ Marquet, R.⁵

43
- 84894237449
- Elsevier, J.N. Abelson, M.I. Simon (Eds.)
- Woodson S.A., Koculi E. Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding: Part B 2009, 190-208. Elsevier. J.N. Abelson, M.I. Simon (Eds.).
- (2009) Biophysical, Chemical, and Functional Probes of RNA Structure, Interactions and Folding: Part B , pp. 190-208
- Woodson, S.A.¹ Koculi, E.²

44
- 0016169270
- Hassur S.M., Whitlock H.W. Anal. Biochem. 1974, 59:162-164.
- (1974) Anal. Biochem. , vol.59 , pp. 162-164
- Hassur, S.M.¹ Whitlock, H.W.²

45
- 80355124302
- Zarzosa-Alvarez A.L., Sandoval-Cabrera A., Torres-Huerta A.L., Bermudez-Cruz R.M. JoVE 2010, 43:e2136.
- (2010) JoVE , vol.43
- Zarzosa-Alvarez, A.L.¹ Sandoval-Cabrera, A.² Torres-Huerta, A.L.³ Bermudez-Cruz, R.M.⁴

46
- 0003428645
- Humana Press, Totowa, New Jersey
- Mitchelson K.R., Cheng J. Capillary Electrophoresis of Nucleic Acids 2001, Humana Press, Totowa, New Jersey.
- (2001) Capillary Electrophoresis of Nucleic Acids
- Mitchelson, K.R.¹ Cheng, J.²

47
- 0003428645
- Humana Press, Totowa, New Jersey
- Mitchelson K.R., Cheng J. Capillary Electrophoresis of Nucleic Acids 2010, Humana Press, Totowa, New Jersey.
- (2010) Capillary Electrophoresis of Nucleic Acids
- Mitchelson, K.R.¹ Cheng, J.²

48
- 70349274336
- Walter N.G. Methods 2009, 49:85-86.
- (2009) Methods , vol.49 , pp. 85-86
- Walter, N.G.¹

49
- 0038170063
- Leontis N.B., Westhof E. Curr. Opin. Struct. Biol. 2003, 13:300-308.
- (2003) Curr. Opin. Struct. Biol. , vol.13 , pp. 300-308
- Leontis, N.B.¹ Westhof, E.²

50
- 0035073865
- Doherty E.A., Batey R.T., Masquida B., Doudna J.A. Nat. Struct. Biol. 2001, 8:339-343.
- (2001) Nat. Struct. Biol. , vol.8 , pp. 339-343
- Doherty, E.A.¹ Batey, R.T.² Masquida, B.³ Doudna, J.A.⁴

51
- 33744807172
- Leontis N.B., Lescoute A., Westhof E. Curr. Opin. Struct. Biol. 2006, 16:279-287.
- (2006) Curr. Opin. Struct. Biol. , vol.16 , pp. 279-287
- Leontis, N.B.¹ Lescoute, A.² Westhof, E.³

52
- 0017745570
- Weidner H., Crothers D.M. Nucleic Acids Res. 1977, 4:3401-3414.
- (1977) Nucleic Acids Res. , vol.4 , pp. 3401-3414
- Weidner, H.¹ Crothers, D.M.²

53
- 84858674837
- Hartswood E., Brodie J., Vendra G., Davis I., Finnegan D.J. RNA 2012, 18:729-737.
- (2012) RNA , vol.18 , pp. 729-737
- Hartswood, E.¹ Brodie, J.² Vendra, G.³ Davis, I.⁴ Finnegan, D.J.⁵

54
- 81755161580
- Jambor H., Brunel C., Ephrussi A. RNA 2011, 17:2049-2057.
- (2011) RNA , vol.17 , pp. 2049-2057
- Jambor, H.¹ Brunel, C.² Ephrussi, A.³

55
- 68049085518
- Moore M.D., Hu W.S. AIDS Rev. 2009, 11:91-102.
- (2009) AIDS Rev. , vol.11 , pp. 91-102
- Moore, M.D.¹ Hu, W.S.²

56
- 78149492329
- Graebsch A., Roche S., Kostrewa D., Soding J., Niessing D. PLoS One 2010, 5:e13402.
- (2010) PLoS One , vol.5
- Graebsch, A.¹ Roche, S.² Kostrewa, D.³ Soding, J.⁴ Niessing, D.⁵

57
- 70350120574
- Müller M., Richter K., Heuck A., Kremmer E., Buchner J., Jansen R.P., Niessing D. RNA 2009, 15:2002-2012.
- (2009) RNA , vol.15 , pp. 2002-2012
- Müller, M.¹ Richter, K.² Heuck, A.³ Kremmer, E.⁴ Buchner, J.⁵ Jansen, R.P.⁶ Niessing, D.⁷

58
- 0034615698
- Tan S., Hunziker Y., Pellegrini L., Richmond T.J. J. Mol. Biol. 2000, 297:947-959.
- (2000) J. Mol. Biol. , vol.297 , pp. 947-959
- Tan, S.¹ Hunziker, Y.² Pellegrini, L.³ Richmond, T.J.⁴

59
- 84934441299
- Ryder S.P., Recht M.I., Williamson J.R. Methods Mol. Biol. 2008, 488:99-115.
- (2008) Methods Mol. Biol. , vol.488 , pp. 99-115
- Ryder, S.P.¹ Recht, M.I.² Williamson, J.R.³

60
- 79952593136
- Gagnon K.T., Maxwell E.S. Methods Mol. Biol. 2011, 703:275-291.
- (2011) Methods Mol. Biol. , vol.703 , pp. 275-291
- Gagnon, K.T.¹ Maxwell, E.S.²

61
- 8344245254
- Niessing D., Hüttelmaier S., Zenklusen D., Singer R.H., Burley S.K. Cell 2004, 119:491-502.
- (2004) Cell , vol.119 , pp. 491-502
- Niessing, D.¹ Hüttelmaier, S.² Zenklusen, D.³ Singer, R.H.⁴ Burley, S.K.⁵

62
- 0027172789
- Wong I., Lohman T.M. Proc. Natl. Acad. Sci. USA 1993, 90:5428-5432.
- (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 5428-5432
- Wong, I.¹ Lohman, T.M.²

63
- 78650110707
- Feig A.L. Methods Enzymol. 2009, 468:409-422.
- (2009) Methods Enzymol. , vol.468 , pp. 409-422
- Feig, A.L.¹

64
- 55949092847
- Yang Y., Wang Q., Guo D. Mol. Biotechnol. 2008, 40:87-93.
- (2008) Mol. Biotechnol. , vol.40 , pp. 87-93
- Yang, Y.¹ Wang, Q.² Guo, D.³

65
- 84865232445
- Ritzefeld M., Sewald N. J. Amino Acids 2012, 2012:816032.
- (2012) J. Amino Acids , vol.2012 , pp. 816032
- Ritzefeld, M.¹ Sewald, N.²

66
- 78650944082
- Wong C.J., Launer-Felty K., Cole J.L. Methods Enzymol. 2011, 488:59-79.
- (2011) Methods Enzymol. , vol.488 , pp. 59-79
- Wong, C.J.¹ Launer-Felty, K.² Cole, J.L.³

67
- 84555178817
- Zillner K., Jerabek-Willemsen M., Duhr S., Braun D., Langst G., Baaske P. Methods Mol. Biol. 2012, 815:241-252.
- (2012) Methods Mol. Biol. , vol.815 , pp. 241-252
- Zillner, K.¹ Jerabek-Willemsen, M.² Duhr, S.³ Braun, D.⁴ Langst, G.⁵ Baaske, P.⁶

68
- 77949382968
- Baaske P., Wienken C.J., Reineck P., Duhr S., Braun D. Angew. Chem. Int. Ed. Engl. 2010, 49:2238-2241.
- (2010) Angew. Chem. Int. Ed. Engl. , vol.49 , pp. 2238-2241
- Baaske, P.¹ Wienken, C.J.² Reineck, P.³ Duhr, S.⁴ Braun, D.⁵

69
- 67649109223
- Favicchio R., Dragan A.I., Kneale G.G., Read C.M. Methods Mol. Biol. 2009, 543:589-611.
- (2009) Methods Mol. Biol. , vol.543 , pp. 589-611
- Favicchio, R.¹ Dragan, A.I.² Kneale, G.G.³ Read, C.M.⁴

70
- 77149170364
- Rambo R.P., Tainer J.A. RNA 2010, 16:638-646.
- (2010) RNA , vol.16 , pp. 638-646
- Rambo, R.P.¹ Tainer, J.A.²

71
- 0032824051
- Reed R., Chiara M.D. Methods 1999, 18:3-12.
- (1999) Methods , vol.18 , pp. 3-12
- Reed, R.¹ Chiara, M.D.²

72
- 84862219287
- Schmidt C., Kramer K., Urlaub H. J. Proteomics 2012, 75:3478-3494.
- (2012) J. Proteomics , vol.75 , pp. 3478-3494
- Schmidt, C.¹ Kramer, K.² Urlaub, H.³

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.