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Volumn 18, Issue 4, 2012, Pages 729-737

RNA:RNA interaction can enhance RNA localization in Drosophila oocytes

Author keywords

Drosophila oocyte; Gurken; I factor; RNA localization; RNA:RNA interaction

Indexed keywords

MESSENGER RNA;

EID: 84858674837     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.026674.111     Document Type: Article
Times cited : (7)

References (45)
  • 1
    • 69049101215 scopus 로고    scopus 로고
    • Lighting up mRNA localization in Drosophila oogenesis
    • Becalska AN, Gavis ER. 2009. Lighting up mRNA localization in Drosophila oogenesis. Development 136: 2493-2503.
    • (2009) Development , vol.136 , pp. 2493-2503
    • Becalska, A.N.1    Gavis, E.R.2
  • 2
    • 58849127937 scopus 로고    scopus 로고
    • Drosophila PTB promotes formation of high-order RNP particles and represses oskar translation
    • Besse F, Lopez de Quinto S, Marchand V, Trucco A, Ephrussi A. 2009. Drosophila PTB promotes formation of high-order RNP particles and represses oskar translation. Genes Dev 23: 195-207.
    • (2009) Genes Dev , vol.23 , pp. 195-207
    • Besse, F.1    Lopez De Quinto, S.2    Marchand, V.3    Trucco, A.4    Ephrussi, A.5
  • 3
    • 85158027637 scopus 로고    scopus 로고
    • I elements in Drosophila melanogaster
    • (ed. NL Craig et al.), ASM Press, Washington, DC
    • Bucheton A, Busseau I, Teninges D. 2002. I elements in Drosophila melanogaster. In Mobile DNA II (ed. NL Craig et al.), pp. 796-812. ASM Press, Washington, DC.
    • (2002) Mobile DNA II , pp. 796-812
    • Bucheton, A.1    Busseau, I.2    Teninges, D.3
  • 4
    • 34248531149 scopus 로고    scopus 로고
    • Translocation of mRNAs by molecular motors: Think complex?
    • DOI 10.1016/j.semcdb.2007.01.004, PII S1084952107000262, Mechanisms and biological significance of RNA localization AND Development of ectodermal appendages
    • Bullock SL. 2007. Translocation of mRNAs by molecular motors: think complex? Semin Cell Dev Biol 18: 194-201. (Pubitemid 46756362)
    • (2007) Seminars in Cell and Developmental Biology , vol.18 , Issue.2 , pp. 194-201
    • Bullock, S.L.1
  • 5
    • 0035819004 scopus 로고    scopus 로고
    • Conserved signals and machinery for RNA transport in Drosophila oogenesis and embryogenesis
    • DOI 10.1038/414611a
    • Bullock SL, Ish-Horowicz D. 2001. Conserved signals and machinery for RNA transport in Drosophila oogenesis and embryogenesis. Nature 414: 611-616. (Pubitemid 33151251)
    • (2001) Nature , vol.414 , Issue.6864 , pp. 611-616
    • Bullock, S.L.1    Ish-Horowicz, D.2
  • 6
    • 33745152363 scopus 로고    scopus 로고
    • Exploring the dynamics of adaptation with evolutionary activity plots
    • Bullock S, Bedau MA. 2006. Exploring the dynamics of adaptation with evolutionary activity plots. Artif Life 12: 193-197. (Pubitemid 44178177)
    • (2006) Artificial Life , vol.12 , Issue.2 , pp. 193-197
    • Bullock, S.1    Bedau, M.A.2
  • 7
    • 0037900898 scopus 로고    scopus 로고
    • The Drosophila hairy RNA localization signal modulates the kinetics of cytoplasmic mRNA transport
    • DOI 10.1093/emboj/cdg230
    • Bullock SL, Zicha D, Ish-Horowicz D. 2003. The Drosophila hairy RNA localization signal modulates the kinetics of cytoplasmic mRNA transport. EMBO J 22: 2484-2494. (Pubitemid 36604987)
    • (2003) EMBO Journal , vol.22 , Issue.10 , pp. 2484-2494
    • Bullock, S.L.1    Zicha, D.2    Ish-Horowicz, D.3
  • 8
    • 0025367254 scopus 로고
    • Self-splicing of group I introns
    • Cech TR. 1990. Self-splicing of group I introns. Annu Rev Biochem 59: 543-568.
    • (1990) Annu Rev Biochem , vol.59 , pp. 543-568
    • Cech, T.R.1
  • 9
    • 34250625213 scopus 로고    scopus 로고
    • A Dynein-dependent shortcut rapidly delivers axis determination transcripts into the Drosophila oocyte
    • DOI 10.1242/dev.02832
    • Clark A, Meignin C, Davis I. 2007. A Dynein-dependent shortcut rapidly delivers axis determination transcripts into the Drosophila oocyte. Development 134: 1955-1965. (Pubitemid 46939240)
    • (2007) Development , vol.134 , Issue.10 , pp. 1955-1965
    • Clark, A.1    Meignin, C.2    Davis, I.3
  • 10
    • 22244448405 scopus 로고    scopus 로고
    • The positional, structural, and sequence requirements of the Drosophila TLS RNA localization element
    • DOI 10.1261/rna.7218905
    • Cohen RS, Zhang S, Dollar GL. 2005. The positional, structural, and sequence requirements of the Drosophila TLS RNA localization element. RNA 11: 1017-1029. (Pubitemid 40994183)
    • (2005) RNA , vol.11 , Issue.7 , pp. 1017-1029
    • Cohen, R.S.1    Zhang, S.2    Dollar, G.L.3
  • 11
    • 0025838323 scopus 로고
    • Apical localization of pair-rule transcripts requires 3′ sequences and limits protein diffusion in the Drosophila blastoderm embryo
    • Davis I, Ish-Horowicz D. 1991. Apical localization of pair-rule transcripts requires 3′ sequences and limits protein diffusion in the Drosophila blastoderm embryo. Cell 67: 927-940. (Pubitemid 121001507)
    • (1991) Cell , vol.67 , Issue.5 , pp. 927-940
    • Davis, I.1    Ish-Horowicz, D.2
  • 12
    • 0029088132 scopus 로고
    • A nuclear GFP that marks nuclei in living Drosophila embryos; maternal supply overcomes a delay in the appearance of zygotic fluorescence
    • Davis I, Girdham CH, O'Farrell PH. 1995. A nuclear GFP that marks nuclei in living Drosophila embryos; maternal supply overcomes a delay in the appearance of zygotic fluorescence. Dev Biol 170: 726-729.
    • (1995) Dev Biol , vol.170 , pp. 726-729
    • Davis, I.1    Girdham, C.H.2    O'Farrell, P.H.3
  • 13
    • 34848827439 scopus 로고    scopus 로고
    • Drosophila Squid/hnRNP Helps Dynein Switch from a gurken mRNA Transport Motor to an Ultrastructural Static Anchor in Sponge Bodies
    • DOI 10.1016/j.devcel.2007.08.022, PII S1534580707003449
    • Delanoue R, Herpers B, Soetaert J, Davis I, Rabouille C. 2007. Drosophila Squid/hnRNP helps Dynein switch from a gurken mRNA transport motor to an ultrastructural static anchor in sponge bodies. Dev Cell 13: 523-538. (Pubitemid 47500811)
    • (2007) Developmental Cell , vol.13 , Issue.4 , pp. 523-538
    • Delanoue, R.1    Herpers, B.2    Soetaert, J.3    Davis, I.4    Rabouille, C.5
  • 14
    • 67649662047 scopus 로고    scopus 로고
    • Egalitarian is a selective RNA-binding protein linking mRNA localization signals to the dynein motor
    • Dienstbier M, Boehl F, Li X, Bullock SL. 2009. Egalitarian is a selective RNA-binding protein linking mRNA localization signals to the dynein motor. Genes Dev 23: 1546-1558.
    • (2009) Genes Dev , vol.23 , pp. 1546-1558
    • Dienstbier, M.1    Boehl, F.2    Li, X.3    Bullock, S.L.4
  • 15
    • 0025826161 scopus 로고
    • Oskar organizes the germ plasm and directs localization of the posterior determinant nanos
    • Ephrussi A, Dickinson LK, Lehmann R. 1991. Oskar organizes the germ plasm and directs localization of the posterior determinant nanos. Cell 66: 37-50. (Pubitemid 121001345)
    • (1991) Cell , vol.66 , Issue.1 , pp. 37-50
    • Ephrussi, A.1    Dickinson, L.K.2    Lehmann, R.3
  • 16
    • 0022904750 scopus 로고
    • Transposable elements controlling I-R hybrid dysgenesis in D. melanogaster are similar to mammalian LINEs
    • Fawcett DH, Lister CK, Kellett E, Finnegan DJ. 1986. Transposable elements controlling I-R hybrid dysgenesis in D. melanogaster are similar to mammalian LINEs. Cell 47: 1007-1015. (Pubitemid 17005073)
    • (1986) Cell , vol.47 , Issue.6 , pp. 1007-1015
    • Fawcett, D.H.1    Lister, C.K.2    Kellett, E.3    Finnegan, D.J.4
  • 17
    • 0028639195 scopus 로고
    • Staufen protein associates with the 3′UTR of bicoid mRNA to form particles that move in a microtubule-dependent manner
    • Ferrandon D, Elphick L, Nusslein-Volhard C, St Johnston D. 1994. Staufen protein associates with the 3′UTR of bicoid mRNA to form particles that move in a microtubule-dependent manner. Cell 79: 1221-1232.
    • (1994) Cell , vol.79 , pp. 1221-1232
    • Ferrandon, D.1    Elphick, L.2    Nusslein-Volhard, C.3    St Johnston, D.4
  • 18
    • 0030939498 scopus 로고    scopus 로고
    • RNA-RNA interaction is required for the formation of specific bicoid mRNA 3' UTR-STAUFEN ribonucleoprotein particles
    • DOI 10.1093/emboj/16.7.1751
    • Ferrandon D, Koch I, Westhof E, Nusslein-Volhard C. 1997. RNARNA interaction is required for the formation of specific bicoid mRNA 3′ UTR-STAUFEN ribonucleoprotein particles. EMBO J 16: 1751-1758. (Pubitemid 27161638)
    • (1997) EMBO Journal , vol.16 , Issue.7 , pp. 1751-1758
    • Ferrandon, D.1    Koch, I.2    Westhof, E.3    Nusslein-Volhard, C.4
  • 19
    • 0347156907 scopus 로고    scopus 로고
    • Single mRNA molecules demonstrate probabilistic movement in living mammalian cells
    • DOI 10.1016/S0960-9822(02)01436-7, PII S0960982202014367
    • Fusco D, Accornero N, Lavoie B, Shenoy SM, Blanchard JM, Singer RH, Bertrand E. 2003. Single mRNA molecules demonstrate probabilistic movement in living mammalian cells. Curr Biol 13: 161-167. (Pubitemid 36154346)
    • (2003) Current Biology , vol.13 , Issue.2 , pp. 161-167
    • Fusco, D.1    Accornero, N.2    Lavoie, B.3    Shenoy, S.M.4    Blanchard, J.-M.5    Singer, R.H.6    Bertrand, E.7
  • 20
    • 0035975970 scopus 로고    scopus 로고
    • Drosophila Y14 shuttles to the posterior of the oocyte and is required for oskar mRNA transport
    • DOI 10.1016/S0960-9822(01)00508-5
    • Hachet O, Ephrussi A. 2001. Drosophila Y14 shuttles to the posterior of the oocyte and is required for oskar mRNA transport. Curr Biol 11: 1666-1674. (Pubitemid 33037777)
    • (2001) Current Biology , vol.11 , Issue.21 , pp. 1666-1674
    • Hachet, O.1    Ephrussi, A.2
  • 21
    • 2342439151 scopus 로고    scopus 로고
    • Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localization
    • DOI 10.1038/nature02521
    • Hachet O, Ephrussi A. 2004. Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localization. Nature 428: 959-963. (Pubitemid 38560311)
    • (2004) Nature , vol.428 , Issue.6986 , pp. 959-963
    • Hachet, O.1    Ephrussi, A.2
  • 22
    • 58249104519 scopus 로고    scopus 로고
    • A bioinformatics search pipeline, RNA2DSearch, identifies RNA localization elements in Drosophila retrotransposons
    • Hamilton RS, Hartswood E, Vendra G, Jones C, Van De Bor V, Finnegan D, Davis I. 2009. A bioinformatics search pipeline, RNA2DSearch, identifies RNA localization elements in Drosophila retrotransposons. RNA 15: 200-207.
    • (2009) RNA , vol.15 , pp. 200-207
    • Hamilton, R.S.1    Hartswood, E.2    Vendra, G.3    Jones, C.4    Van De Bor, V.5    Finnegan, D.6    Davis, I.7
  • 24
    • 1042304206 scopus 로고    scopus 로고
    • Prediction of locally stable RNA secondary structures for genome-wide surveys
    • DOI 10.1093/bioinformatics/btg388
    • Hofacker IL, Priwitzer B, Stadler PF. 2004. Prediction of locally stable RNA secondary structures for genome-wide surveys. Bioinformatics 20: 186-190. (Pubitemid 38195676)
    • (2004) Bioinformatics , vol.20 , Issue.2 , pp. 186-190
    • Hofacker, I.L.1    Priwitzer, B.2    Stadler, P.F.3
  • 25
    • 0035863772 scopus 로고    scopus 로고
    • TectoRNA: Modular assembly units for the construction of RNA nano-objects
    • Jaeger L, Westhof E, Leontis NB. 2001. TectoRNA: modular assembly units for the construction of RNA nano-objects. Nucleic Acids Res 29: 455-463. (Pubitemid 32060932)
    • (2001) Nucleic Acids Research , vol.29 , Issue.2 , pp. 455-463
    • Jaeger, L.1    Westhof, E.2    Leontis, N.B.3
  • 26
    • 81755161580 scopus 로고    scopus 로고
    • Dimerization of oskar 3′ UTRs promotes hitchhiking for RNA localization in the Drosophila oocyte
    • Jambor H, Brunel C, Ephrussi A. 2011. Dimerization of oskar 3′ UTRs promotes hitchhiking for RNA localization in the Drosophila oocyte. RNA 17: 2049-2057.
    • (2011) RNA , vol.17 , pp. 2049-2057
    • Jambor, H.1    Brunel, C.2    Ephrussi, A.3
  • 27
    • 70849135366 scopus 로고    scopus 로고
    • Beanplot: A boxplot alternative for visual comparison of distributions
    • Kampstra P. 2008. Beanplot: A boxplot alternative for visual comparison of distributions. J Stat Softw 28: 1-9.
    • (2008) J Stat Softw , vol.28 , pp. 1-9
    • Kampstra, P.1
  • 28
    • 0025814789 scopus 로고
    • Oskar mRNA is localized to the posterior pole of the Drosophila oocyte
    • Kim-Ha J, Smith JL, Macdonald PM. 1991. oskar mRNA is localized to the posterior pole of the Drosophila oocyte. Cell 66: 23-35. (Pubitemid 121001344)
    • (1991) Cell , vol.66 , Issue.1 , pp. 23-35
    • Kim-Ha, J.1    Smith, J.L.2    Macdonald, P.M.3
  • 29
    • 78649728813 scopus 로고    scopus 로고
    • Evidence for a transport-trap mode of Drosophila melanogaster gurken mRNA localization
    • doi: 10.1371/journal.pone.0015448
    • Lan L, Lin S, Zhang S, Cohen RS. 2010. Evidence for a transport-trap mode of Drosophila melanogaster gurken mRNA localization. PLoS ONE 5: e15448. doi: 10.1371/journal.pone.0015448.
    • (2010) PLoS ONE , vol.5
    • Lan, L.1    Lin, S.2    Zhang, S.3    Cohen, R.S.4
  • 30
    • 0037332453 scopus 로고    scopus 로고
    • Drosophila gurken (TGFα) mRNA localizes as particles that move within the oocyte in two dynein-dependent steps
    • DOI 10.1016/S1534-5807(03)00058-3, PII S1534580703000583
    • MacDougall N, Clark A, MacDougall E, Davis I. 2003. Drosophila gurken (TGFα) mRNA localizes as particles that move within the oocyte in two dynein-dependent steps. Dev Cell 4: 307-319. (Pubitemid 36342357)
    • (2003) Developmental Cell , vol.4 , Issue.3 , pp. 307-319
    • MacDougall, N.1    Clark, A.2    MacDougall, E.3    Davis, I.4
  • 31
    • 0031032805 scopus 로고    scopus 로고
    • An egalitarian-BicaudalD complex is essential for oocyte specification and axis determination in Drosophila
    • Mach JM, Lehmann R. 1997. An Egalitarian-BicaudalD complex is essential for oocyte specification and axis determination in Drosophila. Genes Dev 11: 423-435. (Pubitemid 27097642)
    • (1997) Genes and Development , vol.11 , Issue.4 , pp. 423-435
    • Mach, J.M.1    Lehmann, R.2
  • 32
    • 39049153905 scopus 로고    scopus 로고
    • A minimal WLE2 element is not sufficient to direct apical localization in the absence of RNAs containing the full length wingless 3′UTR
    • Najand N, Simmonds AJ. 2007. A minimal WLE2 element is not sufficient to direct apical localization in the absence of RNAs containing the full length wingless 3′UTR. RNA Biol 4: 138-146. (Pubitemid 351246249)
    • (2007) RNA Biology , vol.4 , Issue.3 , pp. 138-146
    • Najand, N.1    Simmonds, A.J.2
  • 33
    • 2342549289 scopus 로고    scopus 로고
    • Egalitarian binds dynein light chain to establish oocyte polarity and maintain oocyte fate
    • DOI 10.1038/ncb1122
    • Navarro C, Puthalakath H, Adams JM, Strasser A, Lehmann R. 2004. Egalitarian binds dynein light chain to establish oocyte polarity and maintain oocyte fate. Nat Cell Biol 6: 427-435. (Pubitemid 38607503)
    • (2004) Nature Cell Biology , vol.6 , Issue.5 , pp. 427-435
    • Navarro, C.1    Puthalakath, H.2    Adams, J.M.3    Strasser, A.4    Lehmann, R.5
  • 34
    • 0027368350 scopus 로고
    • The Drosophila dorsoventral patterning gene gurken produces a dorsally localized RNA and encodes a TGFα-like protein
    • DOI 10.1016/0092-8674(93)90688-M
    • Neuman-Silberberg FS, Schupbach T. 1993. The Drosophila dorsoventral patterning gene gurken produces a dorsally localized RNA and encodes a TGF α-like protein. Cell 75: 165-174. (Pubitemid 23306030)
    • (1993) Cell , vol.75 , Issue.1 , pp. 165-174
    • Neuman-Silberberg, F.S.1    Schupbach, T.2
  • 37
    • 0029085434 scopus 로고
    • Localization of oskar RNA regulates oskar translation and requires Oskar protein
    • Rongo C, Gavis ER, Lehmann R. 1995. Localization of oskar RNA regulates oskar translation and requires Oskar protein. Development 121: 2737-2746.
    • (1995) Development , vol.121 , pp. 2737-2746
    • Rongo, C.1    Gavis, E.R.2    Lehmann, R.3
  • 38
    • 14944374254 scopus 로고    scopus 로고
    • In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein
    • DOI 10.1093/nar/gki221
    • Seleme MC, Disson O, Robin S, Brun C, Teninges D, Bucheton A. 2005. In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein. Nucleic Acids Res 33: 776-785. (Pubitemid 40361007)
    • (2005) Nucleic Acids Research , vol.33 , Issue.2 , pp. 776-785
    • Del, C.S.M.1    Disson, O.2    Robin, S.3    Brun, C.4    Teninges, D.5    Bucheton, A.6
  • 39
    • 0002031074 scopus 로고
    • Developmental genentics of oogenesis
    • (ed. M Bate, AMartinez Arias), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Spradling AC. 1993. Developmental genentics of oogenesis. In The development of Drosophila melanogaster, Vol. 1 (ed. M Bate, AMartinez Arias), pp. 1-70. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1993) The Development of Drosophila Melanogaster , vol.1 , pp. 1-70
    • Spradling, A.C.1
  • 40
    • 0024786410 scopus 로고
    • Multiple steps in the localization of bicoid RNA to the anterior pole of the Drosophila oocyte
    • St Johnston D, Driever W, Berleth T, Richstein S, Nusslein-Volhard C. 1989. Multiple steps in the localization of bicoid RNA to the anterior pole of the Drosophila oocyte. Development 107: 13-19.
    • (1989) Development , vol.107 , pp. 13-19
    • St Johnston, D.1    Driever, W.2    Berleth, T.3    Richstein, S.4    Nusslein-Volhard, C.5
  • 41
    • 0031832688 scopus 로고    scopus 로고
    • Oocyte polarity depends on regulation of gurken by Vasa
    • Tomancak P, Guichet A, Zavorszky P, Ephrussi A. 1998. Oocyte polarity depends on regulation of gurken by Vasa. Development 125: 1723-1732. (Pubitemid 28256740)
    • (1998) Development , vol.125 , Issue.9 , pp. 1723-1732
    • Tomancak, P.1    Guichet, A.2    Zavorszky, P.3    Ephrussi, A.4
  • 42
    • 2342628401 scopus 로고    scopus 로고
    • mRNA localisation gets more complex
    • DOI 10.1016/j.ceb.2004.03.008, PII S0955067404000468
    • Van de Bor V, Davis I. 2004. mRNA localisation gets more complex. Curr Opin Cell Biol 16: 300-307. (Pubitemid 38610411)
    • (2004) Current Opinion in Cell Biology , vol.16 , Issue.3 , pp. 300-307
    • Van De, B.V.1    Davis, I.2
  • 43
    • 21344451867 scopus 로고    scopus 로고
    • gurken and the I factor retrotransposon RNAs share common localization signals and machinery
    • DOI 10.1016/j.devcel.2005.04.012, PII S153458070500167X
    • Van De Bor V, Hartswood E, Jones C, Finnegan D, Davis I. 2005. gurken and the I factor retrotransposon RNAs share common localization signals and machinery. Dev Cell 9: 51-62. (Pubitemid 40903659)
    • (2005) Developmental Cell , vol.9 , Issue.1 , pp. 51-62
    • Van De, B.V.1    Hartswood, E.2    Jones, C.3    Finnegan, D.4    Davis, I.5
  • 45
    • 0035675140 scopus 로고    scopus 로고
    • Small bristles, the Drosophila ortholog of NXF-1, is essential for mRNA export throughout development
    • Wilkie GS, Zimyanin V, Kirby R, Korey C, Francis-Lang H, Van Vactor D, Davis I. 2001. Small bristles, the Drosophila ortholog of NXF-1, is essential for mRNA export throughout development. RNA 7: 1781-1792. (Pubitemid 34042292)
    • (2001) RNA , vol.7 , Issue.12 , pp. 1781-1792
    • Wilkie, G.S.1    Zimyanin, V.2    Kirby, R.3    Korey, C.4    Francis-Lang, H.5    Van Vactor, D.6    Davis, I.7


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