-
3
-
-
0027976675
-
The solution structure of the four-way DNA junction at low-salt conditions: A fluorescence resonance energy transfer analysis
-
Clegg, R.M., Murchie, A.I. and Lilley, D.M. (1994). The solution structure of the four-way DNA junction at low-salt conditions: a fluorescence resonance energy transfer analysis. Biophys. J. 66, 99-109. (Pubitemid 24016489)
-
(1994)
Biophysical Journal
, vol.66
, Issue.1
, pp. 99-109
-
-
Clegg, R.M.1
Murchie, A.I.H.2
Lilley, D.M.J.3
-
4
-
-
0027751968
-
Conformational distributions of a four-way DNA junction revealed by time- resolved fluorescence resonance energy transfer
-
DOI 10.1021/bi00213a014
-
Eis, P.S. and Millar, D.P. (1993). Conformational distributions of a four-way DNA junction revealed by time-resolved fluorescence resonance energy transfer. Biochemistry. 32, 13852-13860. (Pubitemid 24018236)
-
(1993)
Biochemistry
, vol.32
, Issue.50
, pp. 13852-13860
-
-
Eis, P.S.1
Millar, D.P.2
-
5
-
-
33645101318
-
SRY and human sex determination: The basic tail of the HMG box functions as a kinetic clamp to augment DNA bending
-
Phillips, N.B., Jancso-Radek, A., Ittah, V., Singh, R., Chan, G., Haas, E. and Weiss, M.A. (2006). SRY and human sex determination: the basic tail of the HMG box functions as a kinetic clamp to augment DNA bending. J. Mol. Biol. 358, 172-192.
-
(2006)
J. Mol. Biol.
, vol.358
, pp. 172-192
-
-
Phillips, N.B.1
Jancso-Radek, A.2
Ittah, V.3
Singh, R.4
Chan, G.5
Haas, E.6
Weiss, M.A.7
-
6
-
-
0022426192
-
Time resolved fluorescence of the Pf1 bacteriophage DNA binding protein: Determination of oligo- and polynucleotide binding parameters
-
Kneale, G.G. and Wijnaendts van Resandt, R.W. (1985). Time resolved fluorescence of the Pf1 bacteriophage DNA binding protein: determination of oligo- and polynucleotide binding parameters. Eur. J. Biochem. 149, 85-93.
-
(1985)
Eur. J. Biochem.
, vol.149
, pp. 85-93
-
-
Kneale, G.G.1
Wijnaendts Van Resandt, R.W.2
-
7
-
-
0021104392
-
Correction for light absorption in fluorescence studies of protein-ligand interactions
-
Birdsall, B., King, R.W., Wheeler, M.R., Lewis, C.A. Jr., Goode, S.R., Dunlap, R.B. and Roberts, G.C. (1983). Correction for light absorption in fluorescence studies of protein-ligand interactions. Anal. Biochem. 132, 353-361.
-
(1983)
Anal. Biochem.
, vol.132
, pp. 353-361
-
-
Birdsall, B.1
King, R.W.2
Wheeler, M.R.3
Lewis, Jr.C.A.4
Goode, S.R.5
Dunlap, R.B.6
Roberts, G.C.7
-
8
-
-
0028955753
-
Binding of the HIV-1 nucleocapsid protein to the primer tRNA-3 Lys in vitro, is essentially not specific
-
Mély, Y., de Rocquigny, H., Sorinas-Jimeno, M., Keith, G., Roques, B.P., Marquet, R. and Gérard, D. (1995). Binding of the HIV-1 nucleocapsid protein to the primer tRNA-3 Lys in vitro, is essentially not specific. J. Biol. Chem. 270, 1650-1656.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 1650-1656
-
-
Mély, Y.1
De Rocquigny, H.2
Sorinas-Jimeno, M.3
Keith, G.4
Roques, B.P.5
Marquet, R.6
Gérard, D.7
-
9
-
-
0028957756
-
Recombinant human replication protein A binds to polynu-cleotides with low cooperativity
-
Kim, C. and Wold, M.S. (1995). Recombinant human replication protein A binds to polynu-cleotides with low cooperativity. Biochemistry. 34, 2058-2064.
-
(1995)
Biochemistry.
, vol.34
, pp. 2058-2064
-
-
Kim, C.1
Wold, M.S.2
-
10
-
-
0033544727
-
The energetics of HMG box interactions with DNA: Thermodynamics of the DNA binding of the HMG box from mouse Sox-5
-
DOI 10.1006/jmbi.1999.3285
-
Privalov, P.L., Jelesarov, I., Read, C.M., Dragan, A.I. and Crane-Robinson, C. (1999). The energetics of HMG box interactions with DNA. Thermodynamics of the DNA binding of the HMG box from mouse Sox-5. J. Mol. Biol. 294, 997-1013. (Pubitemid 30000390)
-
(1999)
Journal of Molecular Biology
, vol.294
, Issue.4
, pp. 997-1013
-
-
Privalov, P.L.1
Jelesarov, I.2
Read, C.M.3
Dragan, A.I.4
Crane-Robinson, C.5
-
11
-
-
0037459241
-
The energetics of specific binding of AT-hooks from HMGA1 to target DNA
-
DOI 10.1016/S0022-2836(03)00050-0
-
Dragan, A.I., Liggins, J.R., Crane-Robinson, C. and Privalov, P.L. (2003). The energetics of specific binding of AT-hooks from HMGA1 to target DNA. J. Mol. Biol. 327, 393-411. (Pubitemid 36298710)
-
(2003)
Journal of Molecular Biology
, vol.327
, Issue.2
, pp. 393-411
-
-
Dragan, A.I.1
Liggins, J.R.2
Crane-Robinson, C.3
Privalov, P.L.4
-
12
-
-
5144227739
-
Thermodynamic signature of GCN4-bZIP binding to DNA indicates the role of water in discriminating between the AP-1 and ATF/CREB sites
-
DOI 10.1016/j.jmb.2004.08.101, PII S002228360401112X
-
Dragan, A.I., Frank, L., Liu, Y., Makeyeva, E.N., Crane-Robinson, C. and Privalov, P.L. (2004). Thermodynamic signature of GCN4-bZIP binding to DNA indicates the role of water in discriminating between the AP-1 and ATF/CREB sites. J. Mol. Biol. 343, 865-878. (Pubitemid 39345949)
-
(2004)
Journal of Molecular Biology
, vol.343
, Issue.4
, pp. 865-878
-
-
Dragan, A.I.1
Frank, L.2
Liu, Y.3
Makeyeva, E.N.4
Crane-Robinson, C.5
Privalov, P.L.6
-
13
-
-
27444436325
-
Stability and DNA binding ability of the DNA binding domains of interferon regulatory factors 1 and 3
-
DOI 10.1021/bi051115o
-
Hargreaves, V. V., Makeyeva, E.N., Dragan, A.I. and Privalov, P.L. (2005). Stability and DNA binding ability of the DNA binding domains of interferon regulatory factors 1 and 3. Biochemistry. 44, 14202-14209. (Pubitemid 41533045)
-
(2005)
Biochemistry
, vol.44
, Issue.43
, pp. 14202-14209
-
-
Hargreaves, V.V.1
Makeyeva, E.N.2
Dragan, A.I.3
Privalov, P.L.4
-
14
-
-
30144441074
-
Forces driving the binding of homeodomains to DNA
-
DOI 10.1021/bi051705m
-
Dragan, A.I., Li, Z., Makeyeva, E.N., Milgotina, E.I., Liu, Y., Crane-Robinson, C. and Privalov, P.L. (2006). Forces driving the binding of homeodomains to DNA. Biochemistry. 45, 141-51. (Pubitemid 43054091)
-
(2006)
Biochemistry
, vol.45
, Issue.1
, pp. 141-151
-
-
Dragan, A.I.1
Li, Z.2
Makeyeva, E.N.3
Milgotina, E.I.4
Liu, Y.5
Crane-Robinson, C.6
Privalov, P.L.7
-
15
-
-
0042166066
-
DNA binding of a non-sequence-specific HMG-D protein is entropy driven with a substantial non-electrostatic contribution
-
DOI 10.1016/S0022-2836(03)00785-X
-
Dragan, A.I., Klass, J., Read, C., Churchill, M.E., Crane-Robinson, C. and Privalov, P.L. (2003). DNA binding of a non-sequence-specific HMG-D protein is entropy driven with a substantial non-electrostatic contribution. J. Mol. Biol. 331, 795-813. (Pubitemid 36945438)
-
(2003)
Journal of Molecular Biology
, vol.331
, Issue.4
, pp. 795-813
-
-
Dragan, A.I.1
Klass, J.2
Read, C.3
Churchill, M.E.A.4
Crane-Robinson, C.5
Privalov, P.L.6
-
16
-
-
4644219557
-
DNA binding and bending by HMG boxes: Energetic determinants of specificity
-
DOI 10.1016/j.jmb.2004.08.035, PII S0022283604010150
-
Dragan, A.I., Read, C.M., Makeyeva, E.N., Milgotina, E.I., Churchill, M.E., Crane-Robinson, C. and Privalov, P.L. (2004). DNA binding and bending by HMG boxes: energetic determinants of specificity. J. Mol. Biol. 343, 371-393. (Pubitemid 39296872)
-
(2004)
Journal of Molecular Biology
, vol.343
, Issue.2
, pp. 371-393
-
-
Dragan, A.I.1
Read, C.M.2
Makeyeva, E.N.3
Milgotina, E.I.4
Churchill, M.E.A.5
Crane-Robinson, C.6
Privalov, P.L.7
-
17
-
-
4944226045
-
DNA-binding domain of GCN4 induces bending of both the ATF-CREB and AP-1 binding sites of DNA
-
DOI 10.1093/nar/gkh854
-
Dragan, A.I., Liu, Y., Makeyeva, E.N. and Privalov, P.L. (2004). DNA-binding domain of GCN4 induces bending of both the ATF/CREB and AP-1 binding sites of DNA. Nucleic Acids Res. 32, 5192-5197. (Pubitemid 39445506)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.17
, pp. 5192-5197
-
-
Dragan, A.I.1
Liu, Y.2
Mekeyeva, E.N.3
Privalov, P.L.4
-
18
-
-
0026705922
-
An Sry-related gene expressed during spermatogenesis in the mouse encodes a sequence-specific DNA-binding protein
-
Denny, P., Swift, S., Connor, F. and Ashwor th, A. (1992). An Sry-related gene expressed during spermatogenesis in the mouse encodes a sequence-specific DNA-binding protein. EMBO J. 11, 3705-3712.
-
(1992)
EMBO J.
, vol.11
, pp. 3705-3712
-
-
Denny, P.1
Swift, S.2
Connor, F.3
Ashworth, A.4
-
19
-
-
0034081137
-
Mechanism for specificity by HMG-1 in enhanceosome assembly
-
DOI 10.1128/MCB.20.12.4359-4370.2000
-
Ellwood, K.B., Yen, Y.M., Johnson, R.C. and Carey, M. (2000). Mechanism for specificity by HMG-1 in enhanceosome assembly. Mol. Cell. Biol. 20, 4359-4370. (Pubitemid 30346630)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.12
, pp. 4359-4370
-
-
Ellwood, K.B.1
Yen, Y.-M.2
Johnson, R.C.3
Carey, M.4
-
20
-
-
0027993040
-
The DNA sequence specificity of HMG boxes lies in the minor wing of the structure
-
Read, C.M., Cary, P.D., Preston, N.S., Lnenicek-Allen, M. and Crane-Robinson, C. (1994). The DNA sequence specificity of HMG boxes lies in the minor wing of the structure. EMBO J. 13, 5639-5646. (Pubitemid 24363032)
-
(1994)
EMBO Journal
, vol.13
, Issue.23
, pp. 5639-5646
-
-
Read, C.M.1
Cary, P.D.2
Preston, N.S.3
Lnenicek-Allen, M.4
Crane-Robinson, C.5
-
21
-
-
0028999513
-
Differences in the DNA binding properties of the HMG-box domains of HMG1 and the sex-determining factor SRY
-
Teo, S.H., Grasser, K.D. and Thomas, J.O. (1995). Differences in the DNA binding properties of the HMG-box domains of HMG1 and the sex-determining factor SRY. Eur. J. Biochem. 230, 943-950.
-
(1995)
Eur. J. Biochem.
, vol.230
, pp. 943-950
-
-
Teo, S.H.1
Grasser, K.D.2
Thomas, J.O.3
-
22
-
-
0017077538
-
Fluorescence measurements of binding parameters for bacteriophage T4 gene 32 protein to mono-, oligo-, and polynucleotides
-
Kelly, R.C., Jensen, D.E. and von Hippel, P.H. (1976). Fluorescence measurements of binding parameters for bacteriophage T4 gene 32 protein to mono-, oligo-, and polynucleotides. J. Biol. Chem. 251, 7240-7250.
-
(1976)
J. Biol. Chem.
, vol.251
, pp. 7240-7250
-
-
Kelly, R.C.1
Jensen, D.E.2
Von Hippel, P.H.3
-
23
-
-
0016175370
-
Theoretical aspects of DNA-protein interactions: Cooperative and non-cooperative binding of large ligands to a one-dimensional homogeneous lattice
-
McGhee, J.D. and von Hippel, P.H. (1974). Theoretical aspects of DNA-protein interactions: cooperative and non-cooperative binding of large ligands to a one-dimensional homogeneous lattice. J. Mol. Biol. 86, 469-489.
-
(1974)
J. Mol. Biol.
, vol.86
, pp. 469-489
-
-
McGhee, J.D.1
Von Hippel, P.H.2
-
24
-
-
0032575767
-
The energetics of HMG box interactions with DNA. Thermodynamic description of the box from mouse Sox-5
-
DOI 10.1006/jmbi.1998.1895
-
Crane-Robinson, C., Read, C.M., Cary, P.D., Driscoll, P.C., Dragan, A.I. and Privalov, P.L. (1998). The energetics of HMG box interactions with DNA. Thermodynamic description of the box from mouse Sox-5. J. Mol. Biol. 281, 705-717. (Pubitemid 28383141)
-
(1998)
Journal of Molecular Biology
, vol.281
, Issue.4
, pp. 705-717
-
-
Crane-Robinson, C.1
Read, C.M.2
Cary, P.D.3
Driscoll, P.C.4
Dragan, A.I.5
Privalov, P.L.6
-
25
-
-
78049331363
-
-
Integrated DNA Technologies Research Report
-
Behlke, M.A., Huang, L., Bogh, L., Rose, S. and Devor, E.J. (2005). Fluorescence quenching by proximal G-bases. Integrated DNA Technologies Research Report. http://www. idtdna.com.
-
(2005)
Fluorescence Quenching by Proximal G-bases
-
-
Behlke, M.A.1
Huang, L.2
Bogh, L.3
Rose, S.4
Devor, E.J.5
-
27
-
-
0025975541
-
Circular dichroism and fluorescence analysis of the interaction of Pf1 gene 5 protein with poly(dT)
-
Carpenter, M.L. and Kneale, G.G. (1991). Circular dichroism and fluorescence: analysis of the interaction of Pf1 gene 5 protein with poly(dT). J. Mol. Biol. 217, 681-689. (Pubitemid 121003314)
-
(1991)
Journal of Molecular Biology
, vol.217
, Issue.4
, pp. 681-689
-
-
Carpenter, M.L.1
Kneale, G.G.2
|