-
1
-
-
84873377444
-
Autozygome-guided exome sequencing in retinal dystrophy patients reveals pathogenetic mutations and novel candidate disease genes
-
Abu-Safieh, L., M. Alrashed, S. Anazi, H. Alkuraya, A.O. Khan, M. Al-Owain, J. Al-Zahrani, L. Al-Abdi, M. Hashem, S. Al-Tarimi, et al. 2013. Autozygome-guided exome sequencing in retinal dystrophy patients reveals pathogenetic mutations and novel candidate disease genes. Genome Res. 23:236-247. http://dx.doi.org/10.1101/gr.144105.112
-
(2013)
Genome Res
, vol.23
, pp. 236-247
-
-
Abu-Safieh, L.1
Alrashed, M.2
Anazi, S.3
Alkuraya, H.4
Khan, A.O.5
Al-Owain, M.6
Al-Zahrani, J.7
Al-Abdi, L.8
Hashem, M.9
Al-Tarimi, S.10
-
2
-
-
0034615921
-
A stretch of positively charged amino acids at the N terminus of Hansenula polymorpha Pex3p is involved in incorporation of the protein into the peroxisomal membrane
-
Baerends, R.J., K.N. Faber, A.M. Kram, J.A. Kiel, I.J. van der Klei, and M. Veenhuis. 2000. A stretch of positively charged amino acids at the N terminus of Hansenula polymorpha Pex3p is involved in incorporation of the protein into the peroxisomal membrane. J. Biol. Chem. 275:9986- 9995. http://dx.doi.org/10.1074/jbc.275.14.9986
-
(2000)
J. Biol. Chem
, vol.275
-
-
Baerends, R.J.1
Faber, K.N.2
Kram, A.M.3
Kiel, J.A.4
van der Klei, I.J.5
Veenhuis, M.6
-
3
-
-
27944504351
-
p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtininduced cell death
-
Bjørkøy, G., T. Lamark, A. Brech, H. Outzen, M. Perander, A. Overvatn, H. Stenmark, and T. Johansen. 2005. p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtininduced cell death. J. Cell Biol. 171:603-614. http://dx.doi.org/10.1083/jcb.200507002
-
(2005)
J. Cell Biol
, vol.171
, pp. 603-614
-
-
Bjørkøy, G.1
Lamark, T.2
Brech, A.3
Outzen, H.4
Perander, M.5
Overvatn, A.6
Stenmark, H.7
Johansen, T.8
-
4
-
-
33845792555
-
CellProfiler: image analysis software for identifying and quantifying cell phenotypes
-
Carpenter, A.E., T.R. Jones, M.R. Lamprecht, C. Clarke, I.H. Kang, O. Friman, D.A. Guertin, J.H. Chang, R.A. Lindquist, J. Moffat, et al. 2006. CellProfiler: image analysis software for identifying and quantifying cell phenotypes. Genome Biol. 7:R100. http://dx.doi.org/10.1186/gb-2006-7-10-r100
-
(2006)
Genome Biol
, vol.7
-
-
Carpenter, A.E.1
Jones, T.R.2
Lamprecht, M.R.3
Clarke, C.4
Kang, I.H.5
Friman, O.6
Guertin, D.A.7
Chang, J.H.8
Lindquist, R.A.9
Moffat, J.10
-
5
-
-
84875124248
-
Autophagy protects the retina from light-induced degeneration
-
Chen, Y., O. Sawada, H. Kohno, Y.Z. Le, C. Subauste, T. Maeda, and A. Maeda. 2013. Autophagy protects the retina from light-induced degeneration. J. Biol. Chem. 288:7506-7518. http://dx.doi.org/10.1074/jbc.M112.439935
-
(2013)
J. Biol. Chem
, vol.288
, pp. 7506-7518
-
-
Chen, Y.1
Sawada, O.2
Kohno, H.3
Le, Y.Z.4
Subauste, C.5
Maeda, T.6
Maeda, A.7
-
7
-
-
84876345355
-
NBR1 acts as an autophagy receptor for peroxisomes
-
Deosaran, E., K.B. Larsen, R. Hua, G. Sargent, Y. Wang, S. Kim, T. Lamark, M. Jauregui, K. Law, J. Lippincott-Schwartz, et al. 2013. NBR1 acts as an autophagy receptor for peroxisomes. J. Cell Sci. 126:939-952. http://dx.doi.org/10.1242/jcs.114819
-
(2013)
J. Cell Sci
, vol.126
, pp. 939-952
-
-
Deosaran, E.1
Larsen, K.B.2
Hua, R.3
Sargent, G.4
Wang, Y.5
Kim, S.6
Lamark, T.7
Jauregui, M.8
Law, K.9
Lippincott-Schwartz, J.10
-
8
-
-
77956128041
-
Identification of an unusual variant peroxisome biogenesis disorder caused by mutations in the PEX16 gene
-
Ebberink, M.S., B. Csanyi, W.K. Chong, S. Denis, P. Sharp, P.A. Mooijer, C.J. Dekker, C. Spooner, L.H. Ngu, C. De Sousa, et al. 2010. Identification of an unusual variant peroxisome biogenesis disorder caused by mutations in the PEX16 gene. J. Med. Genet. 47:608-615. http://dx.doi.org/10.1136/jmg.2009.074302
-
(2010)
J. Med. Genet
, vol.47
, pp. 608-615
-
-
Ebberink, M.S.1
Csanyi, B.2
Chong, W.K.3
Denis, S.4
Sharp, P.5
Mooijer, P.A.6
Dekker, C.J.7
Spooner, C.8
Ngu, L.H.9
De Sousa, C.10
-
9
-
-
84864035725
-
A novel defect of peroxisome division due to a homozygous non-sense mutation in the PEX11? gene
-
Ebberink, M.S., J. Koster, G. Visser, F. Spronsen, I. Stolte-Dijkstra, G.P. Smit, J.M. Fock, S. Kemp, R.J. Wanders, and H.R. Waterham. 2012. A novel defect of peroxisome division due to a homozygous non-sense mutation in the PEX11? gene. J. Med. Genet. 49:307-313. http://dx.doi.org/10.1136/jmedgenet-2012-100778
-
(2012)
J. Med. Genet
, vol.49
, pp. 307-313
-
-
Ebberink, M.S.1
Koster, J.2
Visser, G.3
Spronsen, F.4
Stolte-Dijkstra, I.5
Smit, G.P.6
Fock, J.M.7
Kemp, S.8
Wanders, R.J.9
Waterham, H.R.10
-
11
-
-
42049094041
-
PpAtg30 tags peroxisomes for turnover by selective autophagy
-
Farré, J.C., R. Manjithaya, R.D. Mathewson, and S. Subramani. 2008. PpAtg30 tags peroxisomes for turnover by selective autophagy. Dev. Cell. 14:365- 376. http://dx.doi.org/10.1016/j.devcel.2007.12.011
-
(2008)
Dev. Cell
, vol.14
-
-
Farré, J.C.1
Manjithaya, R.2
Mathewson, R.D.3
Subramani, S.4
-
12
-
-
75149143548
-
Roles of Pichia pastoris Uvrag in vacuolar protein sorting and the phosphatidylinositol 3-kinase complex in phagophore elongation in autophagy pathways
-
Farré, J.C., R.D. Mathewson, R. Manjithaya, and S. Subramani. 2010. Roles of Pichia pastoris Uvrag in vacuolar protein sorting and the phosphatidylinositol 3-kinase complex in phagophore elongation in autophagy pathways. Autophagy. 6:86-99. http://dx.doi.org/10.4161/auto.6.1.10535
-
(2010)
Autophagy
, vol.6
, pp. 86-99
-
-
Farré, J.C.1
Mathewson, R.D.2
Manjithaya, R.3
Subramani, S.4
-
13
-
-
84877579321
-
Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11
-
Farré, J.C., A. Burkenroad, S.F. Burnett, and S. Subramani. 2013. Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11. EMBO Rep. 14:441-449. http://dx.doi.org/10.1038/embor.2013.40
-
(2013)
EMBO Rep
, vol.14
, pp. 441-449
-
-
Farré, J.C.1
Burkenroad, A.2
Burnett, S.F.3
Subramani, S.4
-
14
-
-
0034654053
-
Alpha-synuclein overexpression promotes aggregation of mutant huntingtin
-
Furlong, R.A., Y. Narain, J. Rankin, A. Wyttenbach, and D.C. Rubinsztein. 2000. Alpha-synuclein overexpression promotes aggregation of mutant huntingtin. Biochem. J. 346:577-581. http://dx.doi.org/10.1042/0264-6021:3460577
-
(2000)
Biochem. J
, vol.346
, pp. 577-581
-
-
Furlong, R.A.1
Narain, Y.2
Rankin, J.3
Wyttenbach, A.4
Rubinsztein, D.C.5
-
15
-
-
78650812302
-
Antibacterial autophagy occurs at PI(3)P-enriched domains of the endoplasmic reticulum and requires Rab1 GTPase
-
Huang, J., C.L. Birmingham, S. Shahnazari, J. Shiu, Y.T. Zheng, A.C. Smith, K.G. Campellone, W.D. Heo, S. Gruenheid, T. Meyer, et al. 2011. Antibacterial autophagy occurs at PI(3)P-enriched domains of the endoplasmic reticulum and requires Rab1 GTPase. Autophagy. 7:17-26. http://dx.doi.org/10.4161/auto.7.1.13840
-
(2011)
Autophagy
, vol.7
, pp. 17-26
-
-
Huang, J.1
Birmingham, C.L.2
Shahnazari, S.3
Shiu, J.4
Zheng, Y.T.5
Smith, A.C.6
Campellone, K.G.7
Heo, W.D.8
Gruenheid, S.9
Meyer, T.10
-
16
-
-
84873625462
-
Peroxisome proliferators reduce spatial memory impairment, synaptic failure, and neurodegeneration in brains of a double transgenic mice model of Alzheimer's disease
-
Inestrosa, N.C., F.J. Carvajal, J.M. Zolezzi, C. Tapia-Rojas, F. Serrano, D. Karmelic, E.M. Toledo, A. Toro, J. Toro, and M.J. Santos. 2013. Peroxisome proliferators reduce spatial memory impairment, synaptic failure, and neurodegeneration in brains of a double transgenic mice model of Alzheimer's disease. J. Alzheimers Dis. 33:941-959
-
(2013)
J. Alzheimers Dis
, vol.33
, pp. 941-959
-
-
Inestrosa, N.C.1
Carvajal, F.J.2
Zolezzi, J.M.3
Tapia-Rojas, C.4
Serrano, F.5
Karmelic, D.6
Toledo, E.M.7
Toro, A.8
Toro, J.9
Santos, M.J.10
-
17
-
-
33645221489
-
Excess peroxisomes are degraded by autophagic machinery in mammals
-
Iwata, J., J. Ezaki, M. Komatsu, S. Yokota, T. Ueno, I. Tanida, T. Chiba, K. Tanaka, and E. Kominami. 2006. Excess peroxisomes are degraded by autophagic machinery in mammals. J. Biol. Chem. 281:4035-4041. http://dx.doi.org/10.1074/jbc.M512283200
-
(2006)
J. Biol. Chem
, vol.281
, pp. 4035-4041
-
-
Iwata, J.1
Ezaki, J.2
Komatsu, M.3
Yokota, S.4
Ueno, T.5
Tanida, I.6
Chiba, T.7
Tanaka, K.8
Kominami, E.9
-
18
-
-
0034989953
-
Pichia pastoris Pex14p, a phosphorylated peroxisomal membrane protein, is part of a PTS-receptor docking complex and interacts with many peroxins
-
Johnson, M.A., W.B. Snyder, J.L. Cereghino, M. Veenhuis, S. Subramani, and J.M. Cregg. 2001. Pichia pastoris Pex14p, a phosphorylated peroxisomal membrane protein, is part of a PTS-receptor docking complex and interacts with many peroxins. Yeast. 18:621-641. http://dx.doi.org/10.1002/yea.711
-
(2001)
Yeast
, vol.18
, pp. 621-641
-
-
Johnson, M.A.1
Snyder, W.B.2
Cereghino, J.L.3
Veenhuis, M.4
Subramani, S.5
Cregg, J.M.6
-
19
-
-
0030054393
-
Characterization of a novel component of the peroxisomal protein import apparatus using fluorescent peroxisomal proteins
-
Kalish, J.E., G.A. Keller, J.C. Morrell, S.J. Mihalik, B. Smith, J.M. Cregg, and S.J. Gould. 1996. Characterization of a novel component of the peroxisomal protein import apparatus using fluorescent peroxisomal proteins. EMBO J. 15:3275-3285.
-
(1996)
EMBO J.
, vol.15
, pp. 3275-3285
-
-
Kalish, J.E.1
Keller, G.A.2
Morrell, J.C.3
Mihalik, S.J.4
Smith, B.5
Cregg, J.M.6
Gould, S.J.7
-
20
-
-
78650823745
-
A quantitative assay for the monitoring of autophagosome accumulation in different phases of the cell cycle
-
Kaminskyy, V., A. Abdi, and B. Zhivotovsky. 2011. A quantitative assay for the monitoring of autophagosome accumulation in different phases of the cell cycle. Autophagy. 7:83-90. http://dx.doi.org/10.4161/auto.7.1.13893
-
(2011)
Autophagy
, vol.7
, pp. 83-90
-
-
Kaminskyy, V.1
Abdi, A.2
Zhivotovsky, B.3
-
21
-
-
0345791524
-
Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease
-
Kikuchi, M., N. Hatano, S. Yokota, N. Shimozawa, T. Imanaka, and H. Taniguchi. 2004. Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease. J. Biol. Chem. 279:421-428. http://dx.doi.org/10.1074/jbc.M305623200
-
(2004)
J. Biol. Chem
, vol.279
, pp. 421-428
-
-
Kikuchi, M.1
Hatano, N.2
Yokota, S.3
Shimozawa, N.4
Imanaka, T.5
Taniguchi, H.6
-
22
-
-
60849099049
-
A role for NBR1 in autophagosomal degradation of ubiquitinated substrates
-
Kirkin, V., T. Lamark, Y.S. Sou, G. Bjørkøy, J.L. Nunn, J.A. Bruun, E. Shvets, D.G. McEwan, T.H. Clausen, P. Wild, et al. 2009. A role for NBR1 in autophagosomal degradation of ubiquitinated substrates. Mol. Cell. 33:505-516. http://dx.doi.org/10.1016/j.molcel.2009.01.020
-
(2009)
Mol. Cell
, vol.33
, pp. 505-516
-
-
Kirkin, V.1
Lamark, T.2
Sou, Y.S.3
Bjørkøy, G.4
Nunn, J.L.5
Bruun, J.A.6
Shvets, E.7
McEwan, D.G.8
Clausen, T.H.9
Wild, P.10
-
23
-
-
84862295360
-
Guidelines for the use and interpretation of assays for monitoring autophagy
-
Klionsky, D.J., F.C. Abdalla, H. Abeliovich, R.T. Abraham, A. Acevedo-Arozena, K. Adeli, L. Agholme, M. Agnello, P. Agostinis, J.A. Aguirre-Ghiso, et al. 2012. Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy. 8:445-544. http://dx.doi.org/10.4161/auto.19496
-
(2012)
Autophagy
, vol.8
, pp. 445-544
-
-
Klionsky, D.J.1
Abdalla, F.C.2
Abeliovich, H.3
Abraham, R.T.4
Acevedo-Arozena, A.5
Adeli, K.6
Agholme, L.7
Agnello, M.8
Agostinis, P.9
Aguirre-Ghiso, J.A.10
-
24
-
-
0037371332
-
The Hansenula polymorpha PDD7 gene is essential for macropexophagy and microautophagy
-
Komduur, J.A., M. Veenhuis, and J.A. Kiel. 2003. The Hansenula polymorpha PDD7 gene is essential for macropexophagy and microautophagy. FEMS Yeast Res. 3:27-34
-
(2003)
FEMS Yeast Res
, vol.3
, pp. 27-34
-
-
Komduur, J.A.1
Veenhuis, M.2
Kiel, J.A.3
-
25
-
-
80054704470
-
Peroxisomal alterations in Alzheimer's disease
-
Kou, J., G.G. Kovacs, R. Höftberger, W. Kulik, A. Brodde, S. Forss-Petter, S. Hönigschnabl, A. Gleiss, B. Brügger, R. Wanders, et al. 2011. Peroxisomal alterations in Alzheimer's disease. Acta Neuropathol. 122:271-283. http://dx.doi.org/10.1007/s00401-011-0836-9
-
(2011)
Acta Neuropathol
, vol.122
, pp. 271-283
-
-
Kou, J.1
Kovacs, G.G.2
Höftberger, R.3
Kulik, W.4
Brodde, A.5
Forss-Petter, S.6
Hönigschnabl, S.7
Gleiss, A.8
Brügger, B.9
Wanders, R.10
-
26
-
-
69349102568
-
Selective types of autophagy in yeast
-
Kraft, C., F. Reggiori, and M. Peter. 2009. Selective types of autophagy in yeast. Biochim. Biophys. Acta. 1793:1404-1412. http://dx.doi.org/10.1016/j.bbamcr.2009.02.006
-
(2009)
Biochim. Biophys. Acta
, vol.1793
, pp. 1404-1412
-
-
Kraft, C.1
Reggiori, F.2
Peter, M.3
-
27
-
-
80053564250
-
Midbody accumulation through evasion of autophagy contributes to cellular reprogramming and tumorigenicity
-
Kuo, T.C., C.T. Chen, D. Baron, T.T. Onder, S. Loewer, S. Almeida, C.M. Weismann, P. Xu, J.M. Houghton, F.B. Gao, et al. 2011. Midbody accumulation through evasion of autophagy contributes to cellular reprogramming and tumorigenicity. Nat. Cell Biol. 13:1214-1223. http://dx.doi.org/10.1038/ncb2332
-
(2011)
Nat. Cell Biol
, vol.13
, pp. 1214-1223
-
-
Kuo, T.C.1
Chen, C.T.2
Baron, D.3
Onder, T.T.4
Loewer, S.5
Almeida, S.6
Weismann, C.M.7
Xu, P.8
Houghton, J.M.9
Gao, F.B.10
-
28
-
-
70449728467
-
Spred2 interaction with the late endosomal protein NBR1 down-regulates fibroblast growth factor receptor signaling
-
Mardakheh, F.K., M. Yekezare, L.M. Machesky, and J.K. Heath. 2009. Spred2 interaction with the late endosomal protein NBR1 down-regulates fibroblast growth factor receptor signaling. J. Cell Biol. 187:265-277. http:// dx.doi.org/10.1083/jcb.200905118
-
(2009)
J. Cell Biol
, vol.187
, pp. 265-277
-
-
Mardakheh, F.K.1
Yekezare, M.2
Machesky, L.M.3
Heath, J.K.4
-
29
-
-
80053405720
-
Nbr1 is a novel inhibitor of ligand-mediated receptor tyrosine kinase degradation
-
Mardakheh, F.K., G. Auciello, T.R. Dafforn, J.Z. Rappoport, and J.K. Heath. 2010. Nbr1 is a novel inhibitor of ligand-mediated receptor tyrosine kinase degradation. Mol. Cell. Biol. 30:5672-5685. http://dx.doi.org/10.1128/MCB.00878-10
-
(2010)
Mol. Cell. Biol
, vol.30
, pp. 5672-5685
-
-
Mardakheh, F.K.1
Auciello, G.2
Dafforn, T.R.3
Rappoport, J.Z.4
Heath, J.K.5
-
30
-
-
84869472835
-
Receptor protein complexes are in control of autophagy
-
Mijaljica, D., T.Y. Nazarko, J.H. Brumell, W.P. Huang, M. Komatsu, M. Prescott, A. Simonsen, A. Yamamoto, H. Zhang, D.J. Klionsky, and R.J. Devenish. 2012. Receptor protein complexes are in control of autophagy. Autophagy. 8:1701-1705. http://dx.doi.org/10.4161/auto.21332
-
(2012)
Autophagy
, vol.8
, pp. 1701-1705
-
-
Mijaljica, D.1
Nazarko, T.Y.2
Brumell, J.H.3
Huang, W.P.4
Komatsu, M.5
Prescott, M.6
Simonsen, A.7
Yamamoto, A.8
Zhang, H.9
Klionsky, D.J.10
Devenish, R.J.11
-
31
-
-
84863843241
-
Pex3-anchored Atg36 tags peroxisomes for degradation in Saccharomyces cerevisiae
-
Motley, A.M., J.M. Nuttall, and E.H. Hettema. 2012. Pex3-anchored Atg36 tags peroxisomes for degradation in Saccharomyces cerevisiae. EMBO J. 31:2852-2868. http://dx.doi.org/10.1038/emboj.2012.151
-
(2012)
EMBO J
, vol.31
, pp. 2852-2868
-
-
Motley, A.M.1
Nuttall, J.M.2
Hettema, E.H.3
-
32
-
-
0036163982
-
Paz2 and 13 other PAZ gene products regulate vacuolar engulfment of peroxisomes during micropexophagy
-
Mukaiyama, H., M. Oku, M. Baba, T. Samizo, A.T. Hammond, B.S. Glick, N. Kato, and Y. Sakai. 2002. Paz2 and 13 other PAZ gene products regulate vacuolar engulfment of peroxisomes during micropexophagy. Genes Cells. 7:75-90. http://dx.doi.org/10.1046/j.1356-9597.2001.00499.x
-
(2002)
Genes Cells
, vol.7
, pp. 75-90
-
-
Mukaiyama, H.1
Oku, M.2
Baba, M.3
Samizo, T.4
Hammond, A.T.5
Glick, B.S.6
Kato, N.7
Sakai, Y.8
-
33
-
-
0141964578
-
Modification of a ubiquitin-like protein Paz2 conducted micropexophagy through formation of a novel membrane structure
-
Mukaiyama, H., M. Baba, M. Osumi, S. Aoyagi, N. Kato, Y. Ohsumi, and Y. Sakai. 2004. Modification of a ubiquitin-like protein Paz2 conducted micropexophagy through formation of a novel membrane structure. Mol. Biol. Cell. 15:58-70. http://dx.doi.org/10.1091/mbc.E03- 05-0340
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 58-70
-
-
Mukaiyama, H.1
Baba, M.2
Osumi, M.3
Aoyagi, S.4
Kato, N.5
Ohsumi, Y.6
Sakai, Y.7
-
34
-
-
67649467294
-
Dynamics and diversity in autophagy mechanisms: lessons from yeast
-
Nakatogawa, H., K. Suzuki, Y. Kamada, and Y. Ohsumi. 2009. Dynamics and diversity in autophagy mechanisms: lessons from yeast. Nat. Rev. Mol. Cell Biol. 10:458-467. http://dx.doi.org/10.1038/nrm2708
-
(2009)
Nat. Rev. Mol. Cell Biol
, vol.10
, pp. 458-467
-
-
Nakatogawa, H.1
Suzuki, K.2
Kamada, Y.3
Ohsumi, Y.4
-
35
-
-
70349334586
-
Peroxisome size provides insights into the function of autophagy-related proteins
-
Nazarko, T.Y., J.C. Farré, and S. Subramani. 2009. Peroxisome size provides insights into the function of autophagy-related proteins. Mol. Biol. Cell. 20:3828-3839. http://dx.doi.org/10.1091/mbc.E09-03-0221
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 3828-3839
-
-
Nazarko, T.Y.1
Farré, J.C.2
Subramani, S.3
-
36
-
-
84884536709
-
Peroxisome degradation in mammals: mechanisms of action, recent advances, and perspectives
-
Nordgren, M., B. Wang, O. Apanasets, and M. Fransen. 2013. Peroxisome degradation in mammals: mechanisms of action, recent advances, and perspectives. Front Physiol. 4:145. http://dx.doi.org/10.3389/fphys.2013 .00145
-
(2013)
Front Physiol.
, vol.4
, pp. 145
-
-
Nordgren, M.1
Wang, B.2
Apanasets, O.3
Fransen, M.4
-
37
-
-
0038263977
-
Peroxisome degradation requires catalytically active sterol glucosyltransferase with a GRAM domain
-
Oku, M., D. Warnecke, T. Noda, F. Müller, E. Heinz, H. Mukaiyama, N. Kato, and Y. Sakai. 2003. Peroxisome degradation requires catalytically active sterol glucosyltransferase with a GRAM domain. EMBO J. 22:3231- 3241. http://dx.doi.org/10.1093/emboj/cdg331
-
(2003)
EMBO J
, vol.22
, pp. 3231-3241
-
-
Oku, M.1
Warnecke, D.2
Noda, T.3
Müller, F.4
Heinz, E.5
Mukaiyama, H.6
Kato, N.7
Sakai, Y.8
-
38
-
-
33645564736
-
Principles and applications of multidimensional protein identification technology
-
Paoletti, A.C., B. Zybailov, and M.P. Washburn. 2004. Principles and applications of multidimensional protein identification technology. Expert Rev. Proteomics. 1:275-282. http://dx.doi.org/10.1586/14789450.1.3.275
-
(2004)
Expert Rev. Proteomics
, vol.1
, pp. 275-282
-
-
Paoletti, A.C.1
Zybailov, B.2
Washburn, M.P.3
-
39
-
-
78650879044
-
Mutations in the 5 UTR of ANKRD26, the ankirin repeat domain 26 gene, cause an autosomaldominant form of inherited thrombocytopenia, THC2
-
Pippucci, T., A. Savoia, S. Perrotta, N. Pujol-Moix, P. Noris, G. Castegnaro, A. Pecci, C. Gnan, F. Punzo, C. Marconi, et al. 2011. Mutations in the 5 UTR of ANKRD26, the ankirin repeat domain 26 gene, cause an autosomaldominant form of inherited thrombocytopenia, THC2. Am. J. Hum. Genet. 88:115-120. http://dx.doi.org/10.1016/j.ajhg.2010.12.006
-
(2011)
Am. J. Hum. Genet
, vol.88
, pp. 115-120
-
-
Pippucci, T.1
Savoia, A.2
Perrotta, S.3
Pujol-Moix, N.4
Noris, P.5
Castegnaro, G.6
Pecci, A.7
Gnan, C.8
Punzo, F.9
Marconi, C.10
-
40
-
-
77956492055
-
A mutation in the acylcoenzyme A binding domain-containing protein 5 gene (ACBD5) identified in autosomal dominant thrombocytopenia
-
Punzo, F., E.J. Mientjes, C.F. Rohe, S. Scianguetta, G. Amendola, B.A. Oostra, A.M. Bertoli-Avella, and S. Perrotta. 2010. A mutation in the acylcoenzyme A binding domain-containing protein 5 gene (ACBD5) identified in autosomal dominant thrombocytopenia. J. Thromb. Haemost. 8:2085-2087. http://dx.doi.org/10.1111/j.1538-7836.2010.03979.x
-
(2010)
J. Thromb. Haemost
, vol.8
, pp. 2085-2087
-
-
Punzo, F.1
Mientjes, E.J.2
Rohe, C.F.3
Scianguetta, S.4
Amendola, G.5
Oostra, B.A.6
Bertoli-Avella, A.M.7
Perrotta, S.8
-
41
-
-
28844467909
-
Peroxisomal proliferation protects from beta-amyloid neurodegeneration
-
Santos, M.J., R.A. Quintanilla, A. Toro, R. Grandy, M.C. Dinamarca, J.A. Godoy, and N.C. Inestrosa. 2005. Peroxisomal proliferation protects from beta-amyloid neurodegeneration. J. Biol. Chem. 280:41057-41068. http://dx.doi.org/10.1074/jbc.M505160200
-
(2005)
J. Biol. Chem
, vol.280
, pp. 41057-41068
-
-
Santos, M.J.1
Quintanilla, R.A.2
Toro, A.3
Grandy, R.4
Dinamarca, M.C.5
Godoy, J.A.6
Inestrosa, N.C.7
-
42
-
-
84864067919
-
Fission and proliferation of peroxisomes
-
Schrader, M., N.A. Bonekamp, and M. Islinger. 2012. Fission and proliferation of peroxisomes. Biochim. Biophys. Acta. 1822:1343-1357. http://dx.doi.org/10.1016/j.bbadis.2011.12.014
-
(2012)
Biochim. Biophys. Acta
, vol.1822
, pp. 1343-1357
-
-
Schrader, M.1
Bonekamp, N.A.2
Islinger, M.3
-
43
-
-
0033015535
-
Pex19p interacts with Pex3p and Pex10p and is essential for peroxisome biogenesis in Pichia pastoris
-
Snyder, W.B., K.N. Faber, T.J. Wenzel, A. Koller, G.H. Lüers, L. Rangell, G.A. Keller, and S. Subramani. 1999. Pex19p interacts with Pex3p and Pex10p and is essential for peroxisome biogenesis in Pichia pastoris. Mol. Biol. Cell. 10:1745-1761. http://dx.doi.org/10.1091/mbc.10.6.1745
-
(1999)
Mol. Biol. Cell
, vol.10
, pp. 1745-1761
-
-
Snyder, W.B.1
Faber, K.N.2
Wenzel, T.J.3
Koller, A.4
Lüers, G.H.5
Rangell, L.6
Keller, G.A.7
Subramani, S.8
-
44
-
-
61949097359
-
Methods of plate pexophagy monitoring and positive selection for ATG gene cloning in yeasts
-
Stasyk, O.V., T.Y. Nazarko, and A.A. Sibirny. 2008. Methods of plate pexophagy monitoring and positive selection for ATG gene cloning in yeasts. Methods Enzymol. 451:229-239.
-
(2008)
Methods Enzymol.
, vol.451
, pp. 229-239
-
-
Stasyk, O.V.1
Nazarko, T.Y.2
Sibirny, A.A.3
-
45
-
-
0242695642
-
GSA11 encodes a unique 208-kDa protein required for pexophagy and autophagy in Pichia pastoris
-
Strømhaug, P.E., A. Bevan, and W.A. Dunn Jr. 2001. GSA11 encodes a unique 208-kDa protein required for pexophagy and autophagy in Pichia pastoris. J. Biol. Chem. 276:42422-42435. http://dx.doi.org/10.1074/jbc.M104087200
-
(2001)
J. Biol. Chem
, vol.276
, pp. 42422-42435
-
-
Strømhaug, P.E.1
Bevan, A.2
Dunn Jr., W.A.3
-
46
-
-
4344624322
-
LC3 conjugation system in mammalian autophagy
-
Tanida, I., T. Ueno, and E. Kominami. 2004. LC3 conjugation system in mammalian autophagy. Int. J. Biochem. Cell Biol. 36:2503-2518. http://dx.doi.org/10.1016/j.biocel.2004.05.009
-
(2004)
Int. J. Biochem. Cell Biol
, vol.36
, pp. 2503-2518
-
-
Tanida, I.1
Ueno, T.2
Kominami, E.3
-
47
-
-
84859741506
-
Pexophagy: the selective degradation of peroxisomes
-
Till, A., R. Lakhani, S.F. Burnett, and S. Subramani. 2012. Pexophagy: the selective degradation of peroxisomes. Int. J. Cell Biol. 2012:512721. http://dx.doi.org/10.1155/2012/512721
-
(2012)
Int. J. Cell Biol
, vol.2012
, pp. 512721
-
-
Till, A.1
Lakhani, R.2
Burnett, S.F.3
Subramani, S.4
-
48
-
-
79751472085
-
Peroxisome metabolism and cellular aging
-
Titorenko, V.I., and S.R. Terlecky. 2011. Peroxisome metabolism and cellular aging. Traffic. 12:252-259. http://dx.doi.org/10.1111/j.1600-0854.2010.01144.x
-
(2011)
Traffic
, vol.12
, pp. 252-259
-
-
Titorenko, V.I.1
Terlecky, S.R.2
-
49
-
-
0028855325
-
Divergent modes of autophagy in the methylotrophic yeast Pichia pastoris
-
Tuttle, D.L., and W.A. Dunn Jr. 1995. Divergent modes of autophagy in the methylotrophic yeast Pichia pastoris. J. Cell Sci. 108:25-35.
-
(1995)
J. Cell Sci.
, vol.108
, pp. 25-35
-
-
Tuttle, D.L.1
Dunn Jr., W.A.2
-
50
-
-
76349092667
-
Peroxisomes, lipid metabolism and lipotoxicity
-
Wanders, R.J., S. Ferdinandusse, P. Brites, and S. Kemp. 2010. Peroxisomes, lipid metabolism and lipotoxicity. Biochim. Biophys. Acta. 1801:272- 280. http://dx.doi.org/10.1016/j.bbalip.2010.01.001
-
(2010)
Biochim. Biophys. Acta
, vol.1801
-
-
Wanders, R.J.1
Ferdinandusse, S.2
Brites, P.3
Kemp, S.4
-
51
-
-
0029744977
-
Isolation and characterization of Pas2p, a peroxisomal membrane protein essential for peroxisome biogenesis in the methylotrophic yeast Pichia pastoris
-
Wiemer, E.A., G.H. Lüers, K.N. Faber, T. Wenzel, M. Veenhuis, and S. Subramani. 1996. Isolation and characterization of Pas2p, a peroxisomal membrane protein essential for peroxisome biogenesis in the methylotrophic yeast Pichia pastoris. J. Biol. Chem. 271:18973-18980. http://dx.doi.org/10.1074/jbc.271.31.18973
-
(1996)
J. Biol. Chem
, vol.271
, pp. 18973-18980
-
-
Wiemer, E.A.1
Lüers, G.H.2
Faber, K.N.3
Wenzel, T.4
Veenhuis, M.5
Subramani, S.6
-
52
-
-
38349082663
-
Proteomics characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling
-
Wiese, S., T. Gronemeyer, R. Ofman, M. Kunze, C.P. Grou, J.A. Almeida, M. Eisenacher, C. Stephan, H. Hayen, L. Schollenberger, et al. 2007. Proteomics characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling. Mol. Cell. Proteomics. 6:2045-2057. http://dx.doi.org/10.1074/mcp.M700169-MCP200
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 2045-2057
-
-
Wiese, S.1
Gronemeyer, T.2
Ofman, R.3
Kunze, M.4
Grou, C.P.5
Almeida, J.A.6
Eisenacher, M.7
Stephan, C.8
Hayen, H.9
Schollenberger, L.10
-
53
-
-
74949090299
-
An overview of the molecular mechanism of autophagy
-
Yang, Z., and D.J. Klionsky. 2009. An overview of the molecular mechanism of autophagy. Curr. Top. Microbiol. Immunol. 335:1-32.
-
(2009)
Curr. Top. Microbiol. Immunol.
, vol.335
, pp. 1-32
-
-
Yang, Z.1
Klionsky, D.J.2
-
54
-
-
77951214016
-
Mammalian autophagy: core molecular machinery and signaling regulation
-
Yang, Z., and D.J. Klionsky. 2010. Mammalian autophagy: core molecular machinery and signaling regulation. Curr. Opin. Cell Biol. 22:124-131. http://dx.doi.org/10.1016/j.ceb.2009.11.014
-
(2010)
Curr. Opin. Cell Biol
, vol.22
, pp. 124-131
-
-
Yang, Z.1
Klionsky, D.J.2
-
55
-
-
31944451252
-
Two independent pathways traffic the intraperoxisomal peroxin PpPex8p into peroxisomes: mechanism and evolutionary implications
-
Zhang, L., S. Léon, and S. Subramani. 2006. Two independent pathways traffic the intraperoxisomal peroxin PpPex8p into peroxisomes: mechanism and evolutionary implications. Mol. Biol. Cell. 17:690-699. http://dx.doi.org/10.1091/mbc.E05-08-0758
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 690-699
-
-
Zhang, L.1
Léon, S.2
Subramani, S.3
-
56
-
-
84862273857
-
Monitoring autophagic flux by an improved tandem fluorescent-tagged LC3 (mTagRFP-mWasabi-LC3) reveals that high-dose rapamycin impairs autophagic flux in cancer cells
-
Zhou, C., W. Zhong, J. Zhou, F. Sheng, Z. Fang, Y. Wei, Y. Chen, X. Deng, B. Xia, and J. Lin. 2012. Monitoring autophagic flux by an improved tandem fluorescent-tagged LC3 (mTagRFP-mWasabi-LC3) reveals that high-dose rapamycin impairs autophagic flux in cancer cells. Autophagy. 8:1215-1226. http://dx.doi.org/10.4161/auto.20284
-
(2012)
Autophagy
, vol.8
, pp. 1215-1226
-
-
Zhou, C.1
Zhong, W.2
Zhou, J.3
Sheng, F.4
Fang, Z.5
Wei, Y.6
Chen, Y.7
Deng, X.8
Xia, B.9
Lin, J.10
|