Isolation and identification of endophytic bacteria from root tissues of Salvia miltiorrhiza Bge. and determination of their bioactivities

Annals of Microbiology

Volumn 63, Issue 4, 2013, Pages 1501-1512

  Duan, Jia Li ^a   Li, Xiao Jun ^b   Gao, Jin Ming ^a   Wang, Dong Sheng ^a   Yan, Yan ^a   Xue, Quan Hong ^a  

^a NORTHWEST A F UNIVERSITY   (China)

^b NORTH UNIVERSITY OF CHINA   (China)

Author keywords

Bacillus; Endophytic bacteria; Pseudomonas; Rhizobium; Salvia miltiorrhiza Bge.

Indexed keywords

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); CUCUMIS MELO; FUNGI; FUSARIUM SOLANI; NOVOSPHINGOBIUM; PSEUDOMONAS; RHIZOBIUM; SALVIA MILTIORRHIZA;

EID: 84893726645     PISSN: 15904261     EISSN: 18692044     Source Type: Journal    
DOI: 10.1007/s13213-013-0614-0     Document Type: Article

References (49)

1. Andersen SM, Johnsen K, Nielsen P, Jacobsen C (2000) Pseudomonas frederiksbergensis sp. nov., isolated from soil at a coal gasification site. Int J Syst Evol Microbiol 50(6):1957-1964
2. Andrews JH (1990) Biological control in the phyllosphere: realistic goal or false hope? Can J Plant Pathol 12(3):300-307
3. Bulgari D, Casati P, Crepaldi P, Daffonchio D, Quaglino F, Brusetti L Bianco P (2011) Restructuring of endophytic bacterial communities in grapevine yellows-diseased and recovered Vitis vinifera L. plants. Appl Environ Microbiol 77(14):5018-5022
4. Cho KM, Hong SY, Lee SM, Kim YH, Kahng GG, Lim YP, Kim H, Yun HD (2007) Endophytic bacterial communities in Ginseng and their antifungal activity against pathogens. Microb Ecol 54(2):341-351
5. Clay K, Holah J (1999) Fungal endophyte symbiosis and plant diversity in successional fields. Science 285(5434):1742-1744
6. Compant S, Mitter B, Colli-Mull JG, Gangl H, Sessitsch A (2011) Endophytes of Grapevine flowers, berries, and seeds: identification of cultivable bacteria, comparison with other plant parts, and visualization of niches of colonization. Microb Ecol 62:188-197
7. Cottyn B, Debode J, Regalado E, Mew T, Swings J (2009) Phenotypic and genetic diversity of rice seed-associated bacteria and their role in pathogenicity and biological control. J Appl Microbiol 107(3):885-897
8. De Boer AH, Volkov V (2003) Logistics of water and salt transport through the plant: structure and functioning of the xylem. Plant Cell Environ 26(1):87-101
9. Feng C, Ma Y (2010) Isolation and anti-phytopathogenic activity of secondary metabolites from Alternaria sp. FL25, an endophytic fungus in Ficus carica. Chin J Appl Environ Biol 16:76-78
10. Furtado NAJC, Pupo MT, Carvalho I, Campo VL, Duarte MCT, Bastos JK (2005) Diketopiperazines produced by an Aspergillus fumigatus Brazilian strain. J Braz Chem Soc 16(6B):1448-1453
11. Geromel V, Darin N, Chrétien D, Bénit P, DeLonlay P, Rötig A Munnich A, Rustin P (2002) Coenzyme Q10 and idebenone in the therapy of respiratory chain diseases: rationale and comparative benefits. Mol Genet Metab 77(1-2):21-30
12. Hallmann J, Quadt-Hallmann A,MahaffeeW, Kloepper J (1997) Bacterial endophytes in agricultural crops. Can J Microbiol 43(10):895-914
13. He Q, Liu J, Du Z, Wang G (2011) Chemical constituents of Trametes Cervina. Chin J Anhui TCM College 30(2):73-76
14. Ivanova EP, Christen R, Bizet C, Clermont D, Motreff L, Bouchier C Zhukova NV, Crawford RJ, Kiprianova EA (2009) Pseudomonas brassicacearum subsp neoaurantiaca subsp nov., orangepigmented bacteria isolated from soil and the rhizosphere of agricultural plants. Int J Syst Evol Microbiol 59(10):2476-2481
15. Jha P, Kumar A (2007) Endophytic colonization of Typha australis by a plant growth-promoting bacterium Klebsiella oxytoca strain GR-3. J Appl Microbiol 103(4):1311-1320
16. Kloepper JW, Ryu CM, Zhang S (2004) Induced systemic resistance and promotion of plant growth by Bacillus spp. Phytopathology 94(11):1259-1266
17. Lata H, Li X, Silva B, Moraes R, Halda-Alija L (2006) Identification of IAA-producing endophytic bacteria from micropropagated Echinacea plants using 16S rRNA sequencing. Plant Cell Tissue Organ Cult 85(3):353-359
18. Lee K, Paek K, Ju WT, Lee Y (2006) Sterilization of bacteria, yeast and bacterial endospores by atmospheric-pressure cold plasma using helium and oxygen. J Microbiol 44(3):269-275
19. Lee S, Ka JO, Song HG (2012) Growth promotion of Xanthium italicum by application of rhizobacterial isolates of Bacillus aryabhattai in microcosm soil. J Microbiol 50(1):45-49
20. Li XL, Yuan HM, Qi SS, Feng ML, Liu HW, Zhang XP (2010) Isolation and genetic diversity of the endophytic actinomycetes from Salvia miltiorrhiza Bge. and Polygonatum sibiricum Red. Chin J Microbiol 37(9):1341-1346
21. Li XJ, Tang HY, Duan JL, Gao JM, Xue QH (2012a) Bioactive alkaloids produced by Pseudomonas brassicacearum subsp neoaurantiaca an endophytic bacterium isolated from Salvia miltiorrhiza. Nat Prod Res. doi:10.1080/14786419. 2012.701215
22. Li XJ, Zhang Q, Zhang AL, Gao JM (2012b) Metabolites from Aspergillus fumigatus, an endophytic fungus associated with Melia azedarach, and their antifungal, antifeedant, and toxic activities. J Agric Food Chem 60(13):3424
23. Lodewyckx C, Vangronsveld J, Porteous F, Moore ERB, Taghavi S Mezgeay M, van der Lelie D (2002) Endophytic bacteria and their potential applications. CRC Crit Rev Plant Sci 21(6):583-606
24. Mendes R, Pizzirani-Kleiner AA, Araujo WL, Raaijmakers JM (2007) Diversity of cultivated endophytic bacteria from sugarcane: genetic and biochemical characterization of Burkholderia cepacia complex isolates. Appl Environ Microbiol 73(22):7259-7267
25. Mitova M, Popov S, De Rosa S (2004) Cyclic peptides from a Ruegeria strain of bacteria associated with the sponge Suberites domuncula. J Nat Prod 67(7):1178-1181
26. Nakatsuka S, Miyazaki H, Goto T (1980) Total synthesis of (±)-neoechinulin A, an indole alkaloid containing oxidized diketopiperazine. Tetrahedron Lett 21(29):2817-2820
27. Petrini O (1991) Fungal endophytes of tree leaves. Microb Ecol Leaves 179:197
28. Rao XL, Shen DL, Li J, Jang X, Li L, Zhang M, Feng RH (2007) Isolation of endophytic bacteria from Glycyrrhiza and identifying of antagonistic bacteria. Chin J Microbiol 34:04
29. Ray S, Datta R, Bhadra P, Mitra BCAK (2012) From space to earth: Bacillus aryabhttai found in the Indian Sub-continent. Biosci Discov 3(1):138-145
30. Rosenblueth M, Martínez-Romero E (2006) Bacterial endophytes and their interactions with hosts. Mol Plant Microbe Interact 19(8):827-837
31. Ross IL, Alami Y, Harvey PR, Achouak W, Ryder MH (2000) Genetic diversity and biological control activity of novel species of closely related pseudomonads isolated from wheat field soils in South Australia. Appl Environ Microbiol 66(4):1609-1616
32. Ryan RP, Germaine K, Franks A, Ryan DJ, Dowling DN (2008) Bacterial endophytes: recent developments and applications. FEMS Microbiol Lett 278(1):1-9
33. Saito H, Miura KI (1963) Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta (BBA)-Specialized Sect Nucleic Acids Relat Subj 72:619-629
34. Sarter B (2002) Coenzyme Q10 and cardiovascular disease: a review. J Cardiovasc Nurs 16(4):9
35. Shen GH, Xue QH, Tang M, Chen Q, Wang LN, Duan CM, Xue L, Zhao J (2011) Inhibitory effects of potassium silicate on five soil-borne phytopathogenic fungi in vitro. J Plant Dis Prot 4(117):180-184
36. Shi Y, Tian L, Pei Y (2005) The chemical constituents from the mycelia of marine fungus Rhizopus sp. Chin J Med Chem 15(4):221-223
37. Shivaji S, Chaturvedi P, Begum Z, Pindi PK, Manorama R, Padmanaban DA, Shouche YS, Pawar S, Vaishampayan P, Dutt C (2009) Janibacter hoylei sp. nov., Bacillus isronensis sp. nov. and Bacillus aryabhattai sp. nov., isolated from cryotubes used for collecting air from the upper atmosphere. Int J Syst Evol Microbiol 59(12):2977-2986
38. Siciliano S, Germida J (1999) Taxonomic diversity of bacteria associated with the roots of field-grown transgenic Brassica napus cv. Quest, compared to the non-transgenic B. napus cv. Excel and B. rapa cv. Parkland. FEMS Microbiol Ecol 29(3):263-272
39. Strobel GA (2003) Endophytes as sources of bioactive products. Microbes Infect 5(6):535-544
40. Sturz A, Christie B, Matheson B, Nowak J (1997) Biodiversity of endophytic bacteria which colonize red clover nodules, roots stems and foliage and their influence on host growth. Biol Fert Soils 25(1):13-19
41. Sturz A, Christie B, Nowak J (2000) Bacterial endophytes: potential role in developing sustainable systems of crop production. CRC Crit Rev Plant Sci 19(1):1-30
42. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24(8):1596-1599
43. Van Buren AM, Andre C, Ishimaru CA (1993) Biological control of the bacterial ring rot pathogen by endophytic bacteria isolated from potato. Phytopathology 83(2):140-146
44. Van Loon LC, Bakker P, Pieterse CMJ (1998) Systemic resistance induced by rhizosphere bacteria. Annu Rev Phytopathol 36(1):453-483
45. Wang F, Ji MS, Gu ZM, Zhang Y, Wang JK (2009) Effect of antifungal substances from endophytic bacteria B36 on Fulvia fulva. Chin J BioControl 25(3):250-254
46. Wei XY, Jing MB, Wang JC, Yang XJ (2010) Preliminary study on Salvia miltiorrhiza bung endophytic fungus. Acad J Xi'an Jiaotong Univ 22(4):241-246
47. Yang H, Guo C, Liu G, Rao L, Peng G (2009) Effect of endophytic Aspergillus flavus on activity of oxidases in cell suspension culture of Salvia miltiorrhiza Bunge. Chin J Prog Mod Biomed 9(2):312-314
48. Zhong J, Kenneth GB, Andrew MS, David RA, Phillip CW, Burgess JG (2000) Two diketopiperazines and one halogenated phenol from cultures of the marine bacterium, Pseudoalteromonas luteoviolacea. Nat Prod Lett 14(6):435-440
49. Zhou L, Zuo Z, Chow MSS (2005) Danshen: an overview of its chemistry, pharmacology, pharmacokinetics, and clinical use. J Clin Pharmacol 45(12):1345-1359