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Volumn 75, Issue 11, 2013, Pages 2028-2058

Multistationarity in Sequential Distributed Multisite Phosphorylation Networks

Author keywords

Mass action kinetics; Multistationarity; Rate constants; Sequential distributed phosphorylation; Sign condition

Indexed keywords

PROTEIN;

EID: 84892847601     PISSN: 00928240     EISSN: 15229602     Source Type: Journal    
DOI: 10.1007/s11538-013-9878-6     Document Type: Article
Times cited : (40)

References (31)
  • 1
    • 77956238040 scopus 로고    scopus 로고
    • A model of yeast cell-cycle regulation based on multisite phosphorylation
    • Barik, D., Baumann, W. T., Paul, M. R., Novak, B., & Tyson, J. J. (2010). A model of yeast cell-cycle regulation based on multisite phosphorylation. Mol. Syst. Biol., 6, 1-18.
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 1-18
    • Barik, D.1    Baumann, W.T.2    Paul, M.R.3    Novak, B.4    Tyson, J.J.5
  • 3
    • 84860916876 scopus 로고    scopus 로고
    • Multistationarity in mass action networks with applications to ERK activation
    • Conradi, C., & Flockerzi, D. (2012). Multistationarity in mass action networks with applications to ERK activation. J. Math. Biol., 65(1), 107-156.
    • (2012) J. Math. Biol. , vol.65 , Issue.1 , pp. 107-156
    • Conradi, C.1    Flockerzi, D.2
  • 4
    • 31144454273 scopus 로고    scopus 로고
    • Using chemical reaction network theory to discard a kinetic mechanism hypothesis
    • Conradi, C., Saez-Rodriguez, J., Gilles, E.-D., & Raisch, J. (2005). Using chemical reaction network theory to discard a kinetic mechanism hypothesis. IET Syst. Biol., 152(4), 243-248.
    • (2005) IET Syst. Biol. , vol.152 , Issue.4 , pp. 243-248
    • Conradi, C.1    Saez-Rodriguez, J.2    Gilles, E.-D.3    Raisch, J.4
  • 6
    • 37549009180 scopus 로고    scopus 로고
    • Multistationarity in the activation of a MAPK: parametrizing the relevant region in parameter space
    • 05-131
    • Conradi, C., Flockerzi, D., & Raisch, J. (2008). Multistationarity in the activation of a MAPK: parametrizing the relevant region in parameter space. Math. Biosci., 211, 05-131.
    • (2008) Math. Biosci. , vol.211
    • Conradi, C.1    Flockerzi, D.2    Raisch, J.3
  • 7
    • 66149095852 scopus 로고    scopus 로고
    • Sensitivity of NFAT cycling to cytosolic calcium concentration: implications for hypertrophic signals in cardiac myocytes
    • Cooling, M. T., Hunter, P., & Crampin, E. J. (2009). Sensitivity of NFAT cycling to cytosolic calcium concentration: implications for hypertrophic signals in cardiac myocytes. Biophys. J., 96, 2095-2104.
    • (2009) Biophys. J. , vol.96 , pp. 2095-2104
    • Cooling, M.T.1    Hunter, P.2    Crampin, E.J.3
  • 8
    • 0036234543 scopus 로고    scopus 로고
    • NFAT signaling: choreographing the social lives of cells
    • Crabtree, G. R., & Olson, E. N. (2002). NFAT signaling: choreographing the social lives of cells. Cell, 109, S67-S79.
    • (2002) Cell , vol.109
    • Crabtree, G.R.1    Olson, E.N.2
  • 9
    • 0001364051 scopus 로고
    • The existence and uniqueness of steady states for a class of chemical reaction networks
    • Feinberg, M. (1995a). The existence and uniqueness of steady states for a class of chemical reaction networks. Arch. Ration. Mech. Anal., 132, 311-370.
    • (1995) Arch. Ration. Mech. Anal. , vol.132 , pp. 311-370
    • Feinberg, M.1
  • 10
    • 0000112210 scopus 로고
    • Multiple steady states for chemical reaction networks of deficiency one
    • Feinberg, M. (1995b). Multiple steady states for chemical reaction networks of deficiency one. Arch. Ration. Mech. Anal., 132, 371-406.
    • (1995) Arch. Ration. Mech. Anal. , vol.132 , pp. 371-406
    • Feinberg, M.1
  • 11
    • 84861180391 scopus 로고    scopus 로고
    • Enzyme-sharing as a cause of multi-stationarity in signalling systems
    • Feliu, E., & Wiuf, C. (2012). Enzyme-sharing as a cause of multi-stationarity in signalling systems. J. R. Soc. Interface, 9(71), 1224-1232.
    • (2012) J. R. Soc. Interface , vol.9 , Issue.71 , pp. 1224-1232
    • Feliu, E.1    Wiuf, C.2
  • 12
    • 26844571282 scopus 로고    scopus 로고
    • Multisite protein phosphorylation makes a good threshold but can be a poor switch
    • Gunawardena, J. (2005). Multisite protein phosphorylation makes a good threshold but can be a poor switch. Proc. Natl. Acad. Sci. USA, 102(41), 14617-14622.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , Issue.41 , pp. 14617-14622
    • Gunawardena, J.1
  • 13
    • 36849019999 scopus 로고    scopus 로고
    • Distributivity and processivity in multisite phosphorylation can be distinguished through steady-state invariants
    • Gunawardena, J. (2007). Distributivity and processivity in multisite phosphorylation can be distinguished through steady-state invariants. Biophys. J., 93(11), 3828-3834.
    • (2007) Biophys. J. , vol.93 , Issue.11 , pp. 3828-3834
    • Gunawardena, J.1
  • 14
    • 77951032238 scopus 로고    scopus 로고
    • NFAT pulls the strings during CD4+ T helper cell effector functions
    • Hermann-Kleiter, N., & Baier, G. (2010). NFAT pulls the strings during CD4+ T helper cell effector functions. Blood, 115(15), 2989-2997.
    • (2010) Blood , vol.115 , Issue.15 , pp. 2989-2997
    • Hermann-Kleiter, N.1    Baier, G.2
  • 15
    • 84892858108 scopus 로고    scopus 로고
    • Parameter regimes for bistability in multisite phosphorylation networks
    • Holstein, K., Flockerzi, D., & Conradi, C. (2013). Parameter regimes for bistability in multisite phosphorylation networks. In preparation.
    • (2013) Preparation
    • Holstein, K.1    Flockerzi, D.2    Conradi, C.3
  • 16
    • 0029790351 scopus 로고    scopus 로고
    • Ultrasensitivity in the mitogen-activated protein kinase cascade
    • Huang, C.-Y. F., & Ferrell, J. E. (1996). Ultrasensitivity in the mitogen-activated protein kinase cascade. Proc. Natl. Acad. Sci. USA, 93(19), 10078-10083.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , Issue.19 , pp. 10078-10083
    • Huang, C.-Y.F.1    Ferrell, J.E.2
  • 17
    • 13244292328 scopus 로고    scopus 로고
    • Computation of elementary modes: a unifying framework and the new binary approach
    • Klamt, S., & Gagneur, J. (2004). Computation of elementary modes: a unifying framework and the new binary approach. BMC Bioninform., 175(5).
    • (2004) BMC Bioninform. , vol.175 , Issue.5
    • Klamt, S.1    Gagneur, J.2
  • 18
    • 20644466433 scopus 로고    scopus 로고
    • NFAT proteins: key regulators of T-cell development and function
    • Macian, F. (2005). NFAT proteins: key regulators of T-cell development and function. Nat. Rev. Immunol., 5(6), 472-484.
    • (2005) Nat. Rev. Immunol. , vol.5 , Issue.6 , pp. 472-484
    • Macian, F.1
  • 19
    • 0842288229 scopus 로고    scopus 로고
    • Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades
    • Markevich, N. I., Hoek, J. B., & Kholodenko, B. N. (2004). Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades. J. Cell Biol., 164(3), 353-359.
    • (2004) J. Cell Biol. , vol.164 , Issue.3 , pp. 353-359
    • Markevich, N.I.1    Hoek, J.B.2    Kholodenko, B.N.3
  • 21
    • 33846820252 scopus 로고    scopus 로고
    • Versatile regulation of multisite protein phosphorylation by order of phosphate processing and protein-protein interactions
    • Salazar, C., & Höfer, T. (2007). Versatile regulation of multisite protein phosphorylation by order of phosphate processing and protein-protein interactions. FEBS J., 274, 1046-1061.
    • (2007) FEBS J. , vol.274 , pp. 1046-1061
    • Salazar, C.1    Höfer, T.2
  • 22
    • 66249102308 scopus 로고    scopus 로고
    • Multisite protein phosphorylation-from molecular mechanisms to kinetic models
    • Salazar, C., & Höfer, T. (2009). Multisite protein phosphorylation-from molecular mechanisms to kinetic models. FEBS J., 276(12), 3177-3198.
    • (2009) FEBS J. , vol.276 , Issue.12 , pp. 3177-3198
    • Salazar, C.1    Höfer, T.2
  • 23
    • 0029011218 scopus 로고
    • The MAPK signaling cascade
    • Seger, R., & Krebs, E. G. (1995). The MAPK signaling cascade. FASEB J., 9, 726-735.
    • (1995) FASEB J. , vol.9 , pp. 726-735
    • Seger, R.1    Krebs, E.G.2
  • 24
    • 34547204160 scopus 로고    scopus 로고
    • The MEK/ERK cascade: from signaling specificity to diverse functions
    • Shaul, Y. D., & Seger, R. (2007). The MEK/ERK cascade: from signaling specificity to diverse functions. Biochim. Biophys. Acta, Mol. Cell Res., 1773(8), 1213-1226.
    • (2007) Biochim. Biophys. Acta, Mol. Cell Res. , vol.1773 , Issue.8 , pp. 1213-1226
    • Shaul, Y.D.1    Seger, R.2
  • 25
    • 70350575331 scopus 로고    scopus 로고
    • The rational parameterisation theorem for multisite post-translational modification systems
    • Thomson, M., & Gunawardena, J. (2009a). The rational parameterisation theorem for multisite post-translational modification systems. J. Theor. Biol., 261(4), 626-636.
    • (2009) J. Theor. Biol. , vol.261 , Issue.4 , pp. 626-636
    • Thomson, M.1    Gunawardena, J.2
  • 26
    • 67650360968 scopus 로고    scopus 로고
    • Unlimited multistability in multisite phosphorylation systems
    • Thomson, M., & Gunawardena, J. (2009b). Unlimited multistability in multisite phosphorylation systems. Nature, 460(7252), 274-277.
    • (2009) Nature , vol.460 , Issue.7252 , pp. 274-277
    • Thomson, M.1    Gunawardena, J.2
  • 28
    • 50849121703 scopus 로고    scopus 로고
    • Temporal organization of the cell cycle
    • Tyson, J. J., & Novák, B. (2008). Temporal organization of the cell cycle. Curr. Biol., 18, R759-R768.
    • (2008) Curr. Biol. , vol.18
    • Tyson, J.J.1    Novák, B.2
  • 30
    • 42149099412 scopus 로고    scopus 로고
    • On the number of steady states in a multiple futile cycle
    • Wang, L., & Sontag, E. (2008). On the number of steady states in a multiple futile cycle. J. Math. Biol., 57, 29-52.
    • (2008) J. Math. Biol. , vol.57 , pp. 29-52
    • Wang, L.1    Sontag, E.2
  • 31
    • 73249143291 scopus 로고    scopus 로고
    • The ERK signaling cascade-views from different subcellular compartments
    • Yao, Z., & Seger, R. (2009). The ERK signaling cascade-views from different subcellular compartments. BioFactors, 35(5), 407-416.
    • (2009) BioFactors , vol.35 , Issue.5 , pp. 407-416
    • Yao, Z.1    Seger, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.