-
1
-
-
33751204468
-
Pathway to totipotency: lessons from germ cells
-
Seydoux G, Braun RE, (2006) Pathway to totipotency: lessons from germ cells. Cell 127: 891-904.
-
(2006)
Cell
, vol.127
, pp. 891-904
-
-
Seydoux, G.1
Braun, R.E.2
-
4
-
-
84860320152
-
The regulation of mRNA stability in mammalian cells: 2.0
-
Wu X, Brewer G, (2012) The regulation of mRNA stability in mammalian cells: 2.0. Gene 500: 10-21.
-
(2012)
Gene
, vol.500
, pp. 10-21
-
-
Wu, X.1
Brewer, G.2
-
5
-
-
0037197892
-
Precision and functional specificity in mRNA decay
-
Wang Y, Liu CL, Storey JD, Tibshirani RJ, Herschlag D, et al. (2002) Precision and functional specificity in mRNA decay. Proc Natl Acad Sci U S A 99: 5860-5865.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 5860-5865
-
-
Wang, Y.1
Liu, C.L.2
Storey, J.D.3
Tibshirani, R.J.4
Herschlag, D.5
-
6
-
-
79961060611
-
Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay
-
Munchel SE, Shultzaberger RK, Takizawa N, Weis K, (2011) Dynamic profiling of mRNA turnover reveals gene-specific and system-wide regulation of mRNA decay. Mol Biol Cell 22: 2787-2795.
-
(2011)
Mol Biol Cell
, vol.22
, pp. 2787-2795
-
-
Munchel, S.E.1
Shultzaberger, R.K.2
Takizawa, N.3
Weis, K.4
-
7
-
-
44449166478
-
RNA-binding proteins and post-transcriptional gene regulation
-
Glisovic T, Bachorik JL, Yong J, Dreyfuss G, (2008) RNA-binding proteins and post-transcriptional gene regulation. FEBS Lett 582: 1977-1986.
-
(2008)
FEBS Lett
, vol.582
, pp. 1977-1986
-
-
Glisovic, T.1
Bachorik, J.L.2
Yong, J.3
Dreyfuss, G.4
-
8
-
-
78649729101
-
Cytoplasmic deadenylation: regulation of mRNA fate
-
Wiederhold K, Passmore LA, (2010) Cytoplasmic deadenylation: regulation of mRNA fate. Biochem Soc Trans 38: 1531-1536.
-
(2010)
Biochem Soc Trans
, vol.38
, pp. 1531-1536
-
-
Wiederhold, K.1
Passmore, L.A.2
-
9
-
-
78649881479
-
To polyadenylate or to deadenylate: that is the question
-
Zhang X, Virtanen A, Kleiman FE, (2010) To polyadenylate or to deadenylate: that is the question. Cell Cycle 9: 4437-4449.
-
(2010)
Cell Cycle
, vol.9
, pp. 4437-4449
-
-
Zhang, X.1
Virtanen, A.2
Kleiman, F.E.3
-
10
-
-
84861911071
-
Translational control by changes in poly(A) tail length: recycling mRNAs
-
Weill L, Belloc E, Bava FA, Mendez R, (2012) Translational control by changes in poly(A) tail length: recycling mRNAs. Nat Struct Mol Biol 19: 577-585.
-
(2012)
Nat Struct Mol Biol
, vol.19
, pp. 577-585
-
-
Weill, L.1
Belloc, E.2
Bava, F.A.3
Mendez, R.4
-
12
-
-
84862685172
-
Ccr4-Not complex: the control freak of eukaryotic cells
-
Miller JE, Reese JC, (2012) Ccr4-Not complex: the control freak of eukaryotic cells. Crit Rev Biochem Mol Biol 47: 315-333.
-
(2012)
Crit Rev Biochem Mol Biol
, vol.47
, pp. 315-333
-
-
Miller, J.E.1
Reese, J.C.2
-
13
-
-
84877801967
-
RNA decay machines: deadenylation by the Ccr4-not and Pan2-Pan3 complexes
-
Wahle E, Winkler GS, (2013) RNA decay machines: deadenylation by the Ccr4-not and Pan2-Pan3 complexes. Biochim Biophys Acta 1829: 561-570.
-
(2013)
Biochim Biophys Acta
, vol.1829
, pp. 561-570
-
-
Wahle, E.1
Winkler, G.S.2
-
14
-
-
79953152192
-
The Ccr4-Not complex interacts with the mRNA export machinery
-
Kerr SC, Azzouz N, Fuchs SM, Collart MA, Strahl BD, et al. (2011) The Ccr4-Not complex interacts with the mRNA export machinery. PLoS One 6: e18302.
-
(2011)
PLoS One
, vol.6
-
-
Kerr, S.C.1
Azzouz, N.2
Fuchs, S.M.3
Collart, M.A.4
Strahl, B.D.5
-
15
-
-
33846008044
-
The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex
-
Panasenko O, Landrieux E, Feuermann M, Finka A, Paquet N, et al. (2006) The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex. J Biol Chem 281: 31389-31398.
-
(2006)
J Biol Chem
, vol.281
, pp. 31389-31398
-
-
Panasenko, O.1
Landrieux, E.2
Feuermann, M.3
Finka, A.4
Paquet, N.5
-
16
-
-
79952609007
-
The multifunctional Ccr4-Not complex directly promotes transcription elongation
-
Kruk JA, Dutta A, Fu J, Gilmour DS, Reese JC, (2011) The multifunctional Ccr4-Not complex directly promotes transcription elongation. Genes Dev 25: 581-593.
-
(2011)
Genes Dev
, vol.25
, pp. 581-593
-
-
Kruk, J.A.1
Dutta, A.2
Fu, J.3
Gilmour, D.S.4
Reese, J.C.5
-
17
-
-
84872398471
-
The control of elongation by the yeast Ccr4-not complex
-
Reese JC, (2013) The control of elongation by the yeast Ccr4-not complex. Biochim Biophys Acta 1829: 127-133.
-
(2013)
Biochim Biophys Acta
, vol.1829
, pp. 127-133
-
-
Reese, J.C.1
-
18
-
-
84873247966
-
The Not3/5 subunit of the Ccr4-Not complex: a central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells
-
Collart MA, Panasenko OO, Nikolaev SI, (2013) The Not3/5 subunit of the Ccr4-Not complex: a central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells. Cell Signal 25: 743-751.
-
(2013)
Cell Signal
, vol.25
, pp. 743-751
-
-
Collart, M.A.1
Panasenko, O.O.2
Nikolaev, S.I.3
-
19
-
-
0034692875
-
The essential function of Not1 lies within the Ccr4-Not complex
-
Maillet L, Tu C, Hong YK, Shuster EO, Collart MA, (2000) The essential function of Not1 lies within the Ccr4-Not complex. J Mol Biol 303: 131-143.
-
(2000)
J Mol Biol
, vol.303
, pp. 131-143
-
-
Maillet, L.1
Tu, C.2
Hong, Y.K.3
Shuster, E.O.4
Collart, M.A.5
-
20
-
-
0034141888
-
Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits
-
Albert TK, Lemaire M, van Berkum NL, Gentz R, Collart MA, et al. (2000) Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits. Nucleic Acids Res 28: 809-817.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 809-817
-
-
Albert, T.K.1
Lemaire, M.2
van Berkum, N.L.3
Gentz, R.4
Collart, M.A.5
-
21
-
-
3543016170
-
A complex containing the CCR4 and CAF1 proteins is involved in mRNA deadenylation in Drosophila
-
Temme C, Zaessinger S, Meyer S, Simonelig M, Wahle E, (2004) A complex containing the CCR4 and CAF1 proteins is involved in mRNA deadenylation in Drosophila. EMBO J 23: 2862-2871.
-
(2004)
EMBO J
, vol.23
, pp. 2862-2871
-
-
Temme, C.1
Zaessinger, S.2
Meyer, S.3
Simonelig, M.4
Wahle, E.5
-
22
-
-
84885445581
-
The Ccr4-Not deadenylase complex constitutes the major poly(A) removal activity in C. elegans
-
Nousch M, Techritz N, Hampel D, Millonigg S, Eckmann CR, (2013) The Ccr4-Not deadenylase complex constitutes the major poly(A) removal activity in C. elegans. J Cell Sci 126 (Pt 18) (): 4274-85.
-
(2013)
J Cell Sci
, vol.126
, Issue.Pt 18
, pp. 4274-4285
-
-
Nousch, M.1
Techritz, N.2
Hampel, D.3
Millonigg, S.4
Eckmann, C.R.5
-
23
-
-
70249110072
-
Human Ccr4-Not complexes contain variable deadenylase subunits
-
Lau NC, Kolkman A, van Schaik FM, Mulder KW, Pijnappel WW, et al. (2009) Human Ccr4-Not complexes contain variable deadenylase subunits. Biochem J 422: 443-453.
-
(2009)
Biochem J
, vol.422
, pp. 443-453
-
-
Lau, N.C.1
Kolkman, A.2
van Schaik, F.M.3
Mulder, K.W.4
Pijnappel, W.W.5
-
24
-
-
70349337771
-
The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation
-
Aslam A, Mittal S, Koch F, Andrau JC, Winkler GS, (2009) The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation. Mol Biol Cell 20: 3840-3850.
-
(2009)
Mol Biol Cell
, vol.20
, pp. 3840-3850
-
-
Aslam, A.1
Mittal, S.2
Koch, F.3
Andrau, J.C.4
Winkler, G.S.5
-
25
-
-
79952822512
-
The Ccr4a (CNOT6) and Ccr4b (CNOT6L) deadenylase subunits of the human Ccr4-Not complex contribute to the prevention of cell death and senescence
-
Mittal S, Aslam A, Doidge R, Medica R, Winkler GS, (2011) The Ccr4a (CNOT6) and Ccr4b (CNOT6L) deadenylase subunits of the human Ccr4-Not complex contribute to the prevention of cell death and senescence. Mol Biol Cell 22: 748-758.
-
(2011)
Mol Biol Cell
, vol.22
, pp. 748-758
-
-
Mittal, S.1
Aslam, A.2
Doidge, R.3
Medica, R.4
Winkler, G.S.5
-
26
-
-
34248580923
-
Translational control of maternal Cyclin B mRNA by Nanos in the Drosophila germline
-
Kadyrova LY, Habara Y, Lee TH, Wharton RP, (2007) Translational control of maternal Cyclin B mRNA by Nanos in the Drosophila germline. Development 134: 1519-1527.
-
(2007)
Development
, vol.134
, pp. 1519-1527
-
-
Kadyrova, L.Y.1
Habara, Y.2
Lee, T.H.3
Wharton, R.P.4
-
27
-
-
77649252314
-
NANOS2 interacts with the CCR4-NOT deadenylation complex and leads to suppression of specific RNAs
-
Suzuki A, Igarashi K, Aisaki K, Kanno J, Saga Y, (2010) NANOS2 interacts with the CCR4-NOT deadenylation complex and leads to suppression of specific RNAs. Proc Natl Acad Sci U S A 107: 3594-3599.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 3594-3599
-
-
Suzuki, A.1
Igarashi, K.2
Aisaki, K.3
Kanno, J.4
Saga, Y.5
-
28
-
-
84867832074
-
Human Pumilio proteins recruit multiple deadenylases to efficiently repress messenger RNAs
-
Van Etten J, Schagat TL, Hrit J, Weidmann CA, Brumbaugh J, et al. (2012) Human Pumilio proteins recruit multiple deadenylases to efficiently repress messenger RNAs. J Biol Chem 287: 36370-36383.
-
(2012)
J Biol Chem
, vol.287
, pp. 36370-36383
-
-
Van Etten, J.1
Schagat, T.L.2
Hrit, J.3
Weidmann, C.A.4
Brumbaugh, J.5
-
29
-
-
41149138114
-
Multifunctional deadenylase complexes diversify mRNA control
-
Goldstrohm AC, Wickens M, (2008) Multifunctional deadenylase complexes diversify mRNA control. Nat Rev Mol Cell Biol 9: 337-344.
-
(2008)
Nat Rev Mol Cell Biol
, vol.9
, pp. 337-344
-
-
Goldstrohm, A.C.1
Wickens, M.2
-
30
-
-
33845900443
-
Oskar allows nanos mRNA translation in Drosophila embryos by preventing its deadenylation by Smaug/CCR4
-
Zaessinger S, Busseau I, Simonelig M, (2006) Oskar allows nanos mRNA translation in Drosophila embryos by preventing its deadenylation by Smaug/CCR4. Development 133: 4573-4583.
-
(2006)
Development
, vol.133
, pp. 4573-4583
-
-
Zaessinger, S.1
Busseau, I.2
Simonelig, M.3
-
31
-
-
35548952636
-
Bicaudal-C recruits CCR4-NOT deadenylase to target mRNAs and regulates oogenesis, cytoskeletal organization, and its own expression
-
Chicoine J, Benoit P, Gamberi C, Paliouras M, Simonelig M, et al. (2007) Bicaudal-C recruits CCR4-NOT deadenylase to target mRNAs and regulates oogenesis, cytoskeletal organization, and its own expression. Dev Cell 13: 691-704.
-
(2007)
Dev Cell
, vol.13
, pp. 691-704
-
-
Chicoine, J.1
Benoit, P.2
Gamberi, C.3
Paliouras, M.4
Simonelig, M.5
-
32
-
-
33746055678
-
mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes
-
Behm-Ansmant I, Rehwinkel J, Doerks T, Stark A, Bork P, et al. (2006) mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes. Genes Dev 20: 1885-1898.
-
(2006)
Genes Dev
, vol.20
, pp. 1885-1898
-
-
Behm-Ansmant, I.1
Rehwinkel, J.2
Doerks, T.3
Stark, A.4
Bork, P.5
-
33
-
-
58149103297
-
Deadenylation is a widespread effect of miRNA regulation
-
Eulalio A, Huntzinger E, Nishihara T, Rehwinkel J, Fauser M, et al. (2009) Deadenylation is a widespread effect of miRNA regulation. RNA 15: 21-32.
-
(2009)
RNA
, vol.15
, pp. 21-32
-
-
Eulalio, A.1
Huntzinger, E.2
Nishihara, T.3
Rehwinkel, J.4
Fauser, M.5
-
34
-
-
70349177026
-
Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation
-
Fabian MR, Mathonnet G, Sundermeier T, Mathys H, Zipprich JT, et al. (2009) Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation. Mol Cell 35: 868-880.
-
(2009)
Mol Cell
, vol.35
, pp. 868-880
-
-
Fabian, M.R.1
Mathonnet, G.2
Sundermeier, T.3
Mathys, H.4
Zipprich, J.T.5
-
35
-
-
78049387387
-
Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo
-
Rouget C, Papin C, Boureux A, Meunier AC, Franco B, et al. (2010) Maternal mRNA deadenylation and decay by the piRNA pathway in the early Drosophila embryo. Nature 467: 1128-1132.
-
(2010)
Nature
, vol.467
, pp. 1128-1132
-
-
Rouget, C.1
Papin, C.2
Boureux, A.3
Meunier, A.C.4
Franco, B.5
-
36
-
-
80555150587
-
miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT
-
Fabian MR, Cieplak MK, Frank F, Morita M, Green J, et al. (2011) miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT. Nat Struct Mol Biol 18: 1211-1217.
-
(2011)
Nat Struct Mol Biol
, vol.18
, pp. 1211-1217
-
-
Fabian, M.R.1
Cieplak, M.K.2
Frank, F.3
Morita, M.4
Green, J.5
-
37
-
-
80555131046
-
miRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs
-
Chekulaeva M, Mathys H, Zipprich JT, Attig J, Colic M, et al. (2011) miRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs. Nat Struct Mol Biol 18: 1218-1226.
-
(2011)
Nat Struct Mol Biol
, vol.18
, pp. 1218-1226
-
-
Chekulaeva, M.1
Mathys, H.2
Zipprich, J.T.3
Attig, J.4
Colic, M.5
-
38
-
-
84860534158
-
Cnot1, Cnot2, and Cnot3 maintain mouse and human ESC identity and inhibit extraembryonic differentiation
-
Zheng X, Dumitru R, Lackford BL, Freudenberg JM, Singh AP, et al. (2012) Cnot1, Cnot2, and Cnot3 maintain mouse and human ESC identity and inhibit extraembryonic differentiation. Stem Cells 30: 910-922.
-
(2012)
Stem Cells
, vol.30
, pp. 910-922
-
-
Zheng, X.1
Dumitru, R.2
Lackford, B.L.3
Freudenberg, J.M.4
Singh, A.P.5
-
39
-
-
79955544013
-
Planarian stem cells: a simple paradigm for regeneration
-
Aboobaker AA, (2011) Planarian stem cells: a simple paradigm for regeneration. Trends Cell Biol 21: 304-311.
-
(2011)
Trends Cell Biol
, vol.21
, pp. 304-311
-
-
Aboobaker, A.A.1
-
40
-
-
78650873849
-
The planarian flatworm: an in vivo model for stem cell biology and nervous system regeneration
-
Gentile L, Cebria F, Bartscherer K, (2011) The planarian flatworm: an in vivo model for stem cell biology and nervous system regeneration. Dis Model Mech 4: 12-19.
-
(2011)
Dis Model Mech
, vol.4
, pp. 12-19
-
-
Gentile, L.1
Cebria, F.2
Bartscherer, K.3
-
41
-
-
84872946712
-
Stem cell systems and regeneration in planaria
-
Rink JC, (2013) Stem cell systems and regeneration in planaria. Dev Genes Evol 223: 67-84.
-
(2013)
Dev Genes Evol
, vol.223
, pp. 67-84
-
-
Rink, J.C.1
-
42
-
-
79955985703
-
Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration
-
Wagner DE, Wang IE, Reddien PW, (2011) Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration. Science 332: 811-816.
-
(2011)
Science
, vol.332
, pp. 811-816
-
-
Wagner, D.E.1
Wang, I.E.2
Reddien, P.W.3
-
43
-
-
33746518104
-
A Bruno-like gene is required for stem cell maintenance in planarians
-
Guo T, Peters AH, Newmark PA, (2006) A Bruno-like gene is required for stem cell maintenance in planarians. Dev Cell 11: 159-169.
-
(2006)
Dev Cell
, vol.11
, pp. 159-169
-
-
Guo, T.1
Peters, A.H.2
Newmark, P.A.3
-
44
-
-
28144464878
-
SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells
-
Reddien PW, Oviedo NJ, Jennings JR, Jenkin JC, Sanchez Alvarado A, (2005) SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells. Science 310: 1327-1330.
-
(2005)
Science
, vol.310
, pp. 1327-1330
-
-
Reddien, P.W.1
Oviedo, N.J.2
Jennings, J.R.3
Jenkin, J.C.4
Sanchez Alvarado, A.5
-
45
-
-
77952308587
-
Different requirements for conserved post-transcriptional regulators in planarian regeneration and stem cell maintenance
-
Rouhana L, Shibata N, Nishimura O, Agata K, (2010) Different requirements for conserved post-transcriptional regulators in planarian regeneration and stem cell maintenance. Dev Biol 341: 429-443.
-
(2010)
Dev Biol
, vol.341
, pp. 429-443
-
-
Rouhana, L.1
Shibata, N.2
Nishimura, O.3
Agata, K.4
-
46
-
-
18844438309
-
DjPum, a homologue of Drosophila Pumilio, is essential to planarian stem cell maintenance
-
Salvetti A, Rossi L, Lena A, Batistoni R, Deri P, et al. (2005) DjPum, a homologue of Drosophila Pumilio, is essential to planarian stem cell maintenance. Development 132: 1863-1874.
-
(2005)
Development
, vol.132
, pp. 1863-1874
-
-
Salvetti, A.1
Rossi, L.2
Lena, A.3
Batistoni, R.4
Deri, P.5
-
47
-
-
74549127230
-
Cellular and molecular dissection of pluripotent adult somatic stem cells in planarians
-
Shibata N, Rouhana L, Agata K, (2010) Cellular and molecular dissection of pluripotent adult somatic stem cells in planarians. Dev Growth Differ 52: 27-41.
-
(2010)
Dev Growth Differ
, vol.52
, pp. 27-41
-
-
Shibata, N.1
Rouhana, L.2
Agata, K.3
-
48
-
-
63349095483
-
Spoltud-1 is a chromatoid body component required for planarian long-term stem cell self-renewal
-
Solana J, Lasko P, Romero R, (2009) Spoltud-1 is a chromatoid body component required for planarian long-term stem cell self-renewal. Dev Biol 328: 410-421.
-
(2009)
Dev Biol
, vol.328
, pp. 410-421
-
-
Solana, J.1
Lasko, P.2
Romero, R.3
-
49
-
-
84857320620
-
PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells
-
Rouhana L, Vieira AP, Roberts-Galbraith RH, Newmark PA, (2012) PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells. Development 139: 1083-1094.
-
(2012)
Development
, vol.139
, pp. 1083-1094
-
-
Rouhana, L.1
Vieira, A.P.2
Roberts-Galbraith, R.H.3
Newmark, P.A.4
-
50
-
-
84858724123
-
Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach
-
Solana J, Kao D, Mihaylova Y, Jaber-Hijazi F, Malla S, et al. (2012) Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach. Genome Biol 13: R19.
-
(2012)
Genome Biol
, vol.13
-
-
Solana, J.1
Kao, D.2
Mihaylova, Y.3
Jaber-Hijazi, F.4
Malla, S.5
-
51
-
-
84862214826
-
Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells
-
Onal P, Grun D, Adamidi C, Rybak A, Solana J, et al. (2012) Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells. EMBO J 31: 2755-2769.
-
(2012)
EMBO J
, vol.31
, pp. 2755-2769
-
-
Onal, P.1
Grun, D.2
Adamidi, C.3
Rybak, A.4
Solana, J.5
-
52
-
-
84864376995
-
A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammals
-
Labbe RM, Irimia M, Currie KW, Lin A, Zhu SJ, et al. (2012) A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammals. Stem Cells 30: 1734-1745.
-
(2012)
Stem Cells
, vol.30
, pp. 1734-1745
-
-
Labbe, R.M.1
Irimia, M.2
Currie, K.W.3
Lin, A.4
Zhu, S.J.5
-
53
-
-
78650774202
-
A dual platform approach to transcript discovery for the planarian Schmidtea mediterranea to establish RNAseq for stem cell and regeneration biology
-
Blythe MJ, Kao D, Malla S, Rowsell J, Wilson R, et al. (2010) A dual platform approach to transcript discovery for the planarian Schmidtea mediterranea to establish RNAseq for stem cell and regeneration biology. PLoS One 5: e15617.
-
(2010)
PLoS One
, vol.5
-
-
Blythe, M.J.1
Kao, D.2
Malla, S.3
Rowsell, J.4
Wilson, R.5
-
54
-
-
84857856280
-
Genetic regulators of a pluripotent adult stem cell system in planarians identified by RNAi and clonal analysis
-
Wagner DE, Ho JJ, Reddien PW, (2012) Genetic regulators of a pluripotent adult stem cell system in planarians identified by RNAi and clonal analysis. Cell Stem Cell 10: 299-311.
-
(2012)
Cell Stem Cell
, vol.10
, pp. 299-311
-
-
Wagner, D.E.1
Ho, J.J.2
Reddien, P.W.3
-
55
-
-
84874980486
-
Closing the circle of germline and stem cells: the Primordial Stem Cell hypothesis
-
Solana J, (2013) Closing the circle of germline and stem cells: the Primordial Stem Cell hypothesis. Evodevo 4: 2.
-
(2013)
Evodevo
, vol.4
, pp. 2
-
-
Solana, J.1
-
56
-
-
84862207341
-
A lack of commitment for over 500 million years: conserved animal stem cell pluripotency
-
Aboobaker AA, Kao D, (2012) A lack of commitment for over 500 million years: conserved animal stem cell pluripotency. EMBO J 31: 2747-2749.
-
(2012)
EMBO J
, vol.31
, pp. 2747-2749
-
-
Aboobaker, A.A.1
Kao, D.2
-
57
-
-
84886949339
-
Planarian MBD2/3 is required for adult stem cell pluripotency independently of DNA methylation
-
Jaber-Hijazi F, Lo PJ, Mihaylova Y, Foster JM, Benner JS, et al. (2013) Planarian MBD2/3 is required for adult stem cell pluripotency independently of DNA methylation. Developmental biology 384: 141-153.
-
(2013)
Developmental Biology
, vol.384
, pp. 141-153
-
-
Jaber-Hijazi, F.1
Lo, P.J.2
Mihaylova, Y.3
Foster, J.M.4
Benner, J.S.5
-
58
-
-
78650658739
-
Smed454 dataset: unravelling the transcriptome of Schmidtea mediterranea
-
Abril JF, Cebria F, Rodriguez-Esteban G, Horn T, Fraguas S, et al. (2010) Smed454 dataset: unravelling the transcriptome of Schmidtea mediterranea. BMC Genomics 11: 731.
-
(2010)
BMC Genomics
, vol.11
, pp. 731
-
-
Abril, J.F.1
Cebria, F.2
Rodriguez-Esteban, G.3
Horn, T.4
Fraguas, S.5
-
59
-
-
79959875909
-
De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics
-
Adamidi C, Wang Y, Gruen D, Mastrobuoni G, You X, et al. (2011) De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Res 21: 1193-1200.
-
(2011)
Genome Res
, vol.21
, pp. 1193-1200
-
-
Adamidi, C.1
Wang, Y.2
Gruen, D.3
Mastrobuoni, G.4
You, X.5
-
61
-
-
0034839408
-
Universal occurrence of the vasa-related genes among metazoans and their germline expression in Hydra
-
Mochizuki K, Nishimiya-Fujisawa C, Fujisawa T, (2001) Universal occurrence of the vasa-related genes among metazoans and their germline expression in Hydra. Dev Genes Evol 211: 299-308.
-
(2001)
Dev Genes Evol
, vol.211
, pp. 299-308
-
-
Mochizuki, K.1
Nishimiya-Fujisawa, C.2
Fujisawa, T.3
-
62
-
-
15844403395
-
Distribution of the stem cells (neoblasts) in the planarian Dugesia japonica
-
Orii H, Sakurai T, Watanabe K, (2005) Distribution of the stem cells (neoblasts) in the planarian Dugesia japonica. Dev Genes Evol 215: 143-157.
-
(2005)
Dev Genes Evol
, vol.215
, pp. 143-157
-
-
Orii, H.1
Sakurai, T.2
Watanabe, K.3
-
63
-
-
2642550897
-
Morphological and functional recovery of the planarian photosensing system during head regeneration
-
Inoue T, Kumamoto H, Okamoto K, Umesono Y, Sakai M, et al. (2004) Morphological and functional recovery of the planarian photosensing system during head regeneration. Zoolog Sci 21: 275-283.
-
(2004)
Zoolog Sci
, vol.21
, pp. 275-283
-
-
Inoue, T.1
Kumamoto, H.2
Okamoto, K.3
Umesono, Y.4
Sakai, M.5
-
64
-
-
17844395204
-
Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria
-
Reddien PW, Bermange AL, Murfitt KJ, Jennings JR, Sanchez Alvarado A, (2005) Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria. Dev Cell 8: 635-649.
-
(2005)
Dev Cell
, vol.8
, pp. 635-649
-
-
Reddien, P.W.1
Bermange, A.L.2
Murfitt, K.J.3
Jennings, J.R.4
Sanchez Alvarado, A.5
-
65
-
-
77951213316
-
The Mi-2-like Smed-CHD4 gene is required for stem cell differentiation in the planarian Schmidtea mediterranea
-
Scimone ML, Meisel J, Reddien PW, (2010) The Mi-2-like Smed-CHD4 gene is required for stem cell differentiation in the planarian Schmidtea mediterranea. Development 137: 1231-1241.
-
(2010)
Development
, vol.137
, pp. 1231-1241
-
-
Scimone, M.L.1
Meisel, J.2
Reddien, P.W.3
-
66
-
-
51049089115
-
Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea
-
Eisenhoffer GT, Kang H, Sanchez Alvarado A, (2008) Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea. Cell Stem Cell 3: 327-339.
-
(2008)
Cell Stem Cell
, vol.3
, pp. 327-339
-
-
Eisenhoffer, G.T.1
Kang, H.2
Sanchez Alvarado, A.3
-
67
-
-
73649143160
-
A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineages
-
Pearson BJ, Sanchez Alvarado A, (2010) A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineages. Development 137: 213-221.
-
(2010)
Development
, vol.137
, pp. 213-221
-
-
Pearson, B.J.1
Sanchez Alvarado, A.2
-
68
-
-
0036752126
-
Internally controlled poly(A) tail assay to study gene regulation
-
Gamberi C, Gottlieb E, (2002) Internally controlled poly(A) tail assay to study gene regulation. Biotechniques 33: 476-480, 476, 478, 480.
-
(2002)
Biotechniques
, vol.33
, pp. 476-480
-
-
Gamberi, C.1
Gottlieb, E.2
-
69
-
-
0036337502
-
An anterior function for the Drosophila posterior determinant Pumilio
-
Gamberi C, Peterson DS, He L, Gottlieb E, (2002) An anterior function for the Drosophila posterior determinant Pumilio. Development 129: 2699-2710.
-
(2002)
Development
, vol.129
, pp. 2699-2710
-
-
Gamberi, C.1
Peterson, D.S.2
He, L.3
Gottlieb, E.4
-
70
-
-
0028604498
-
Coordinate initiation of Drosophila development by regulated polyadenylation of maternal messenger RNAs
-
Salles FJ, Lieberfarb ME, Wreden C, Gergen JP, Strickland S, (1994) Coordinate initiation of Drosophila development by regulated polyadenylation of maternal messenger RNAs. Science 266: 1996-1999.
-
(1994)
Science
, vol.266
, pp. 1996-1999
-
-
Salles, F.J.1
Lieberfarb, M.E.2
Wreden, C.3
Gergen, J.P.4
Strickland, S.5
-
71
-
-
0029069689
-
Rapid and sensitive analysis of mRNA polyadenylation states by PCR
-
Salles FJ, Strickland S, (1995) Rapid and sensitive analysis of mRNA polyadenylation states by PCR. PCR Methods Appl 4: 317-321.
-
(1995)
PCR Methods Appl
, vol.4
, pp. 317-321
-
-
Salles, F.J.1
Strickland, S.2
-
72
-
-
33745816717
-
Isolation of planarian X-ray-sensitive stem cells by fluorescence-activated cell sorting
-
Hayashi T, Asami M, Higuchi S, Shibata N, Agata K, (2006) Isolation of planarian X-ray-sensitive stem cells by fluorescence-activated cell sorting. Dev Growth Differ 48: 371-380.
-
(2006)
Dev Growth Differ
, vol.48
, pp. 371-380
-
-
Hayashi, T.1
Asami, M.2
Higuchi, S.3
Shibata, N.4
Agata, K.5
-
73
-
-
84878137449
-
RNA interference by feeding in vitro-synthesized double-stranded RNA to planarians: methodology and dynamics
-
Rouhana L, Weiss JA, Forsthoefel DJ, Lee H, King RS, et al. (2013) RNA interference by feeding in vitro-synthesized double-stranded RNA to planarians: methodology and dynamics. Dev Dyn 242: 718-730.
-
(2013)
Dev Dyn
, vol.242
, pp. 718-730
-
-
Rouhana, L.1
Weiss, J.A.2
Forsthoefel, D.J.3
Lee, H.4
King, R.S.5
-
74
-
-
60849094787
-
Specific roles for the Ccr4-Not complex subunits in expression of the genome
-
Azzouz N, Panasenko OO, Deluen C, Hsieh J, Theiler G, et al. (2009) Specific roles for the Ccr4-Not complex subunits in expression of the genome. RNA 15: 377-383.
-
(2009)
RNA
, vol.15
, pp. 377-383
-
-
Azzouz, N.1
Panasenko, O.O.2
Deluen, C.3
Hsieh, J.4
Theiler, G.5
-
75
-
-
84859355786
-
Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea
-
Resch AM, Palakodeti D, Lu YC, Horowitz M, Graveley BR, (2012) Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea. PLoS One 7: e34447.
-
(2012)
PLoS One
, vol.7
-
-
Resch, A.M.1
Palakodeti, D.2
Lu, Y.C.3
Horowitz, M.4
Graveley, B.R.5
-
76
-
-
33846954393
-
PUF protein-mediated deadenylation is catalyzed by Ccr4p
-
Goldstrohm AC, Seay DJ, Hook BA, Wickens M, (2007) PUF protein-mediated deadenylation is catalyzed by Ccr4p. J Biol Chem 282: 109-114.
-
(2007)
J Biol Chem
, vol.282
, pp. 109-114
-
-
Goldstrohm, A.C.1
Seay, D.J.2
Hook, B.A.3
Wickens, M.4
-
77
-
-
48449084118
-
Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells
-
Marson A, Levine SS, Cole MF, Frampton GM, Brambrink T, et al. (2008) Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells. Cell 134: 521-533.
-
(2008)
Cell
, vol.134
, pp. 521-533
-
-
Marson, A.1
Levine, S.S.2
Cole, M.F.3
Frampton, G.M.4
Brambrink, T.5
-
78
-
-
67650925067
-
High-resolution profiling and discovery of planarian small RNAs
-
Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, et al. (2009) High-resolution profiling and discovery of planarian small RNAs. Proc Natl Acad Sci U S A 106: 11546-11551.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 11546-11551
-
-
Friedlander, M.R.1
Adamidi, C.2
Han, T.3
Lebedeva, S.4
Isenbarger, T.A.5
-
79
-
-
67650805439
-
Diverse miRNA spatial expression patterns suggest important roles in homeostasis and regeneration in planarians
-
Gonzalez-Estevez C, Arseni V, Thambyrajah RS, Felix DA, Aboobaker AA, (2009) Diverse miRNA spatial expression patterns suggest important roles in homeostasis and regeneration in planarians. Int J Dev Biol 53: 493-505.
-
(2009)
Int J Dev Biol
, vol.53
, pp. 493-505
-
-
Gonzalez-Estevez, C.1
Arseni, V.2
Thambyrajah, R.S.3
Felix, D.A.4
Aboobaker, A.A.5
-
80
-
-
44149127238
-
The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians
-
Palakodeti D, Smielewska M, Lu YC, Yeo GW, Graveley BR, (2008) The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians. RNA 14: 1174-1186.
-
(2008)
RNA
, vol.14
, pp. 1174-1186
-
-
Palakodeti, D.1
Smielewska, M.2
Lu, Y.C.3
Yeo, G.W.4
Graveley, B.R.5
-
81
-
-
67650998880
-
Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
-
Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, et al. (2009) Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea. RNA 15: 1483-1491.
-
(2009)
RNA
, vol.15
, pp. 1483-1491
-
-
Lu, Y.C.1
Smielewska, M.2
Palakodeti, D.3
Lovci, M.T.4
Aigner, S.5
-
82
-
-
77952416108
-
The TALE class homeobox gene Smed-prep defines the anterior compartment for head regeneration
-
Felix DA, Aboobaker AA, (2010) The TALE class homeobox gene Smed-prep defines the anterior compartment for head regeneration. PLoS Genet 6: e1000915.
-
(2010)
PLoS Genet
, vol.6
-
-
Felix, D.A.1
Aboobaker, A.A.2
-
83
-
-
24944490097
-
Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture
-
Cebria F, Newmark PA, (2005) Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture. Development 132: 3691-3703.
-
(2005)
Development
, vol.132
, pp. 3691-3703
-
-
Cebria, F.1
Newmark, P.A.2
|