메뉴 건너뛰기




Volumn 15, Issue 8, 2009, Pages 1483-1491

Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea

Author keywords

Bioinformatics; Deep sequencing; microRNAs; Planarians; Stem cells

Indexed keywords

MICRORNA;

EID: 67650998880     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.1702009     Document Type: Article
Times cited : (48)

References (22)
  • 1
    • 0024437224 scopus 로고
    • Regeneration and pattern formation in planarians III. Evidence that neoplasts are totipotent stem cells and the source of blastema cells
    • Baguñà J, Saló E, Auladell C. 1989. Regeneration and pattern formation in planarians III. Evidence that neoplasts are totipotent stem cells and the source of blastema cells. Development 107: 77-86.
    • (1989) Development , vol.107 , pp. 77-86
    • Baguñà, J.1    Saló, E.2    Auladell, C.3
  • 2
    • 0009016682 scopus 로고    scopus 로고
    • From morphology and karyology to molecules. New methods for taxonomical identification of asexual populations of freshwater planarians. A tribute to Professor Mario Benazzi
    • Baguñà J, Carranza S, Pala M, Ribera C, Giribet G, Arnedo MA, Ribas M, Riutort M. 1999. From morphology and karyology to molecules. New methods for taxonomical identification of asexual populations of freshwater planarians. A tribute to Professor Mario Benazzi. Ital J Zool (Modena) 66: 207-214.
    • (1999) Ital J Zool (Modena) , vol.66 , pp. 207-214
    • Baguñà, J.1    Carranza, S.2    Pala, M.3    Ribera, C.4    Giribet, G.5    Arnedo, M.A.6    Ribas, M.7    Riutort, M.8
  • 3
    • 24944490097 scopus 로고    scopus 로고
    • Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture
    • Cebria F, Newmark P. 2005. Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture. Development 132: 3691-3703.
    • (2005) Development , vol.132 , pp. 3691-3703
    • Cebria, F.1    Newmark, P.2
  • 4
    • 51049089115 scopus 로고    scopus 로고
    • Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea
    • Eisenhoffer G, Kang H, Alvarado A. 2008. Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea. Cell Stem Cell 3: 327-339.
    • (2008) Cell Stem Cell , vol.3 , pp. 327-339
    • Eisenhoffer, G.1    Kang, H.2    Alvarado, A.3
  • 5
    • 37648998629 scopus 로고    scopus 로고
    • Getting to the root of miRNA-mediated gene silencing
    • Eulalio A, Huntzinger E, Izaurralde E. 2008. Getting to the root of miRNA-mediated gene silencing. Cell 132: 9-14.
    • (2008) Cell , vol.132 , pp. 9-14
    • Eulalio, A.1    Huntzinger, E.2    Izaurralde, E.3
  • 6
    • 33745816717 scopus 로고    scopus 로고
    • Isolation of planarian X-ray-sensitive stem cells by fluorescence-activated cell sorting
    • Hayashi T, Asami M, Higuchi S, Shibata N, Agata K. 2006. Isolation of planarian X-ray-sensitive stem cells by fluorescence-activated cell sorting. Dev Growth Differ 48: 371-380.
    • (2006) Dev Growth Differ , vol.48 , pp. 371-380
    • Hayashi, T.1    Asami, M.2    Higuchi, S.3    Shibata, N.4    Agata, K.5
  • 8
    • 18344369543 scopus 로고    scopus 로고
    • MicroRNA biogenesis: Coordinated cropping and dicing
    • Kim VN. 2005. MicroRNA biogenesis: Coordinated cropping and dicing. Nat Rev Mol Cell Biol 6: 376-385.
    • (2005) Nat Rev Mol Cell Biol , vol.6 , pp. 376-385
    • Kim, V.N.1
  • 9
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL. 2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 10
    • 20444440706 scopus 로고    scopus 로고
    • Depletion of human micro-RNA miR-125b reveals that it is critical for the proliferation of differentiated cells but not for the down-regulation of putative targets during differentiation
    • Lee Y, Kim H, Chung S, Kim K, Dutta A. 2005. Depletion of human micro-RNA miR-125b reveals that it is critical for the proliferation of differentiated cells but not for the down-regulation of putative targets during differentiation. J Biol Chem 280: 16635-16641.
    • (2005) J Biol Chem , vol.280 , pp. 16635-16641
    • Lee, Y.1    Kim, H.2    Chung, S.3    Kim, K.4    Dutta, A.5
  • 11
    • 0036255131 scopus 로고    scopus 로고
    • Not your father's planarian: A classic model enters the era of functional genomics
    • Newmark P, Sanchez Alvarado A. 2002. Not your father's planarian: A classic model enters the era of functional genomics. Nat Rev Genet 3: 210-219.
    • (2002) Nat Rev Genet , vol.3 , pp. 210-219
    • Newmark, P.1    Sanchez Alvarado, A.2
  • 12
    • 33748133008 scopus 로고    scopus 로고
    • MicroRNAs from the planarian Schmidtea mediterranea: A model system for stem cell biology
    • Palakodeti D, Smielewska M, Graveley B. 2006. MicroRNAs from the planarian Schmidtea mediterranea: A model system for stem cell biology. RNA 12: 1640-1649.
    • (2006) RNA , vol.12 , pp. 1640-1649
    • Palakodeti, D.1    Smielewska, M.2    Graveley, B.3
  • 13
    • 44149127238 scopus 로고    scopus 로고
    • The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians
    • Palakodeti D, Smielewska M, Lu Y-C, Yeo G, Graveley B. 2008. The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians. RNA 14: 1174-1186.
    • (2008) RNA , vol.14 , pp. 1174-1186
    • Palakodeti, D.1    Smielewska, M.2    Lu, Y.-C.3    Yeo, G.4    Graveley, B.5
  • 15
  • 17
    • 31044446936 scopus 로고    scopus 로고
    • Planarian regeneration: Its end is its beginning
    • Sanchez Alvarado A. 2006. Planarian regeneration: Its end is its beginning. Cell 124: 241-245.
    • (2006) Cell , vol.124 , pp. 241-245
    • Sanchez Alvarado, A.1
  • 18
    • 0036923338 scopus 로고    scopus 로고
    • The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells, and regeneration
    • Sanchez Alvarado A, Newmark P, Robb S, Juste R. 2002. The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells, and regeneration. Development 129: 5659-5665.
    • (2002) Development , vol.129 , pp. 5659-5665
    • Sanchez Alvarado, A.1    Newmark, P.2    Robb, S.3    Juste, R.4
  • 20
    • 34347273440 scopus 로고    scopus 로고
    • Nanos function is essential for development and regeneration of planarian germ cells
    • Wang Y, Zayas R, Guo T, Newmark P. 2007. Nanos function is essential for development and regeneration of planarian germ cells. Proc Natl Acad Sci 104: 5901-5906.
    • (2007) Proc Natl Acad Sci , vol.104 , pp. 5901-5906
    • Wang, Y.1    Zayas, R.2    Guo, T.3    Newmark, P.4
  • 22
    • 29444436838 scopus 로고    scopus 로고
    • The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: Analysis of ESTs from the hermaphroditic strain
    • Zayas R, Hernandez A, Habermann B, Wang Y, Stary J, Newmark P. 2005. The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: Analysis of ESTs from the hermaphroditic strain. Proc Natl Acad Sci 102: 18491-18496.
    • (2005) Proc Natl Acad Sci , vol.102 , pp. 18491-18496
    • Zayas, R.1    Hernandez, A.2    Habermann, B.3    Wang, Y.4    Stary, J.5    Newmark, P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.