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Volumn 8, Issue 11, 2013, Pages

Plasma peptide biomarker discovery for amyotrophic lateral sclerosis by MALDI-TOF mass spectrometry profiling

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA INTEGRIN; ALPHA2B INTEGRIN; BIOLOGICAL MARKER; COMPLEMENT COMPONENT C3; PLASMA PROTEIN; THROMBOCYTE FACTOR 4; THYMOSIN BETA4; UNCLASSIFIED DRUG; ZYXIN;

EID: 84892404809     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0079733     Document Type: Article
Times cited : (17)

References (36)
  • 1
    • 80755128213 scopus 로고    scopus 로고
    • Clinical diagnosis and management of amyotrophic lateral sclerosis
    • doi:10.1038/nrneurol.2011.153
    • Hardiman O, van den Berg LH, Kiernan MC (2011) Clinical diagnosis and management of amyotrophic lateral sclerosis. Nat. Rev Neurol 7: 639-749. doi:10.1038/nrneurol.2011.153.
    • (2011) Nat. Rev Neurol , vol.7 , pp. 639-749
    • Hardiman, O.1    Van Den Berg, L.H.2    Kiernan, M.C.3
  • 2
    • 57149120501 scopus 로고    scopus 로고
    • Biomarkers in amyotrophic lateral sclerosis
    • doi:10.1016/S1474-4422(08)70293-X. PubMed: 19081518
    • Turner MR, Kiernan MC, Leigh PN, Talbot K (2009) Biomarkers in amyotrophic lateral sclerosis. Lancet Neurol 8: 94-109. doi:10.1016/S1474- 4422(08)70293-X. PubMed: 19081518.
    • (2009) Lancet Neurol , vol.8 , pp. 94-109
    • Turner, M.R.1    Kiernan, M.C.2    Leigh, P.N.3    Talbot, K.4
  • 3
    • 77954129033 scopus 로고    scopus 로고
    • Plasma biomarkers associated with ALS and their relationship to iron homeostasis
    • doi:10.1002/mus.21625. PubMed: 20544912
    • Mitchell RM, Simmons Z, Beard JL, Stephens HE, Connor JR (2010) Plasma biomarkers associated with ALS and their relationship to iron homeostasis. Muscle Nerve 42: 95-103. doi:10.1002/mus.21625. PubMed: 20544912.
    • (2010) Muscle Nerve , vol.42 , pp. 95-103
    • Mitchell, R.M.1    Simmons, Z.2    Beard, J.L.3    Stephens, H.E.4    Connor, J.R.5
  • 4
    • 84892387155 scopus 로고    scopus 로고
    • Proteome analysis of body fluids for amyotrophic lateral sclerosis (ALS) biomarker discovery
    • In press
    • Kruger T, Lautenschlager J, Grosskreutz J, Rhode H (2012) Proteome analysis of body fluids for amyotrophic lateral sclerosis (ALS) biomarker discovery. Proteomics Clin Appl (In press).
    • (2012) Proteomics Clin Appl
    • Kruger, T.1    Lautenschlager, J.2    Grosskreutz, J.3    Rhode, H.4
  • 5
    • 77954122515 scopus 로고    scopus 로고
    • Discovery and verification of amyotrophic lateral sclerosis biomarkers by proteomics
    • doi:10.1002/mus.21683. PubMed: 20583124
    • Ryberg H, An J, Darko S, Lustgarten JL, Jaffa M et al. (2010) Discovery and verification of amyotrophic lateral sclerosis biomarkers by proteomics. Muscle Nerve 42: 104-111. doi:10.1002/mus.21683. PubMed: 20583124.
    • (2010) Muscle Nerve , vol.42 , pp. 104-111
    • Ryberg, H.1    An, J.2    Darko, S.3    Lustgarten, J.L.4    Jaffa, M.5
  • 6
    • 70449529300 scopus 로고    scopus 로고
    • Proteome analysis reveals candidate markers of disease progression in amyotrophic lateral sclerosis (ALS)
    • doi:10.1016/j.neulet.2009.10.053. PubMed: 19853641
    • Brettschneider J, Lehmensiek V, Mogel H, Pfeifle M, Dorst J et al. (2010) Proteome analysis reveals candidate markers of disease progression in amyotrophic lateral sclerosis (ALS). Neurosci Lett 468: 23-27. doi:10.1016/j.neulet.2009.10.053. PubMed: 19853641.
    • (2010) Neurosci Lett , vol.468 , pp. 23-27
    • Brettschneider, J.1    Lehmensiek, V.2    Mogel, H.3    Pfeifle, M.4    Dorst, J.5
  • 7
    • 79954414960 scopus 로고    scopus 로고
    • Combination of neurofilament heavy chain and complement C3 as CSF biomarkers for ALS
    • doi:10.1111/j.1471-4159.2011.07224.x. PubMed: 21418221
    • Ganesalingam J, An J, Shaw CE, Shaw G, Lacomis D et al. (2011) Combination of neurofilament heavy chain and complement C3 as CSF biomarkers for ALS. J Neurochem 117: 528-537. doi:10.1111/j.1471-4159.2011.07224.x. PubMed: 21418221.
    • (2011) J Neurochem , vol.117 , pp. 528-537
    • Ganesalingam, J.1    An, J.2    Shaw, C.E.3    Shaw, G.4    Lacomis, D.5
  • 8
    • 1542617944 scopus 로고    scopus 로고
    • Serum peptide profiling by magnetic particle-assisted, automated sample processing and MALDI-TOF mass spectrometry
    • doi:10.1021/ac0352171. PubMed: 15018552
    • Villanueva J, Philip J, Entenberg D, Chaparro CA, Tanwar MK et al. (2004) Serum peptide profiling by magnetic particle-assisted, automated sample processing and MALDI-TOF mass spectrometry. Anal Chem 76: 1560-1570. doi:10.1021/ac0352171. PubMed: 15018552.
    • (2004) Anal Chem , vol.76 , pp. 1560-1570
    • Villanueva, J.1    Philip, J.2    Entenberg, D.3    Chaparro, C.A.4    Tanwar, M.K.5
  • 9
    • 79151478127 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry combined with magnetic beads for detecting serum protein biomarkers in parkinson's disease
    • doi:10.1159/000323427. PubMed: 21273779
    • Li YH, Wang J, Zheng XL, Zhang YL, Li X et al. (2011) Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry combined with magnetic beads for detecting serum protein biomarkers in parkinson's disease. Eur Neurol 65: 105-111. doi:10.1159/000323427. PubMed: 21273779.
    • (2011) Eur Neurol , vol.65 , pp. 105-111
    • Li, Y.H.1    Wang, J.2    Zheng, X.L.3    Zhang, Y.L.4    Li, X.5
  • 10
    • 84865462611 scopus 로고    scopus 로고
    • Discovery of serum protein biomarkers in rheumatoid arthritis using MALDI-TOF-MS combined with magnetic beads
    • PubMed: 21922190
    • Zhang X, Yuan Z, Shen B, Zhu M, Liu C et al. (2011) Discovery of serum protein biomarkers in rheumatoid arthritis using MALDI-TOF-MS combined with magnetic beads. Clin Exp Med 12: 145-151. PubMed: 21922190.
    • (2011) Clin Exp Med , vol.12 , pp. 145-151
    • Zhang, X.1    Yuan, Z.2    Shen, B.3    Zhu, M.4    Liu, C.5
  • 11
    • 84866079814 scopus 로고    scopus 로고
    • Monitoring CSF Proteome Alterations in Amyotrophic Lateral Sclerosis: Obstacles and Perspectives in Translating a Novel Marker Panel to the Clinic
    • doi:10.1371/journal.pone.0044401. PubMed: 22970211
    • von Neuhoff N, Oumeraci T, Wolf T, Kollewe K, Bewerunge P et al. (2012) Monitoring CSF Proteome Alterations in Amyotrophic Lateral Sclerosis: Obstacles and Perspectives in Translating a Novel Marker Panel to the Clinic. PLOS ONE 7: e44401. doi:10.1371/journal.pone.0044401. PubMed: 22970211.
    • (2012) PLOS ONE , vol.7
    • Von Neuhoff, N.1    Oumeraci, T.2    Wolf, T.3    Kollewe, K.4    Bewerunge, P.5
  • 12
    • 46249116675 scopus 로고    scopus 로고
    • DAnTE: A statistical tool for quantitative analysis of -omics data
    • doi:10.1093/bioinformatics/btn217. PubMed: 18453552
    • Polpitiya AD, Qian WJ, Jaitly N, Petyuk VA, Adkins JN et al. (2008) DAnTE: a statistical tool for quantitative analysis of -omics data. Bioinformatics 24: 1556-1558. doi:10.1093/bioinformatics/btn217. PubMed: 18453552.
    • (2008) Bioinformatics , vol.24 , pp. 1556-1558
    • Polpitiya, A.D.1    Qian, W.J.2    Jaitly, N.3    Petyuk, V.A.4    Adkins, J.N.5
  • 13
    • 0042338362 scopus 로고    scopus 로고
    • A statistical model for identifying proteins by tandem mass spectrometry
    • doi:10.1021/ac0341261. PubMed: 14632076
    • Nesvizhskii Al Keller A, Kolker E, Aebersold R (2003) A statistical model for identifying proteins by tandem mass spectrometry. Anal Chem 75(17): 4646-4658. doi:10.1021/ac0341261. PubMed: 14632076.
    • (2003) Anal Chem , vol.75 , Issue.17 , pp. 4646-4658
    • Nesvizhskii Al Keller, A.1    Kolker, E.2    Aebersold, R.3
  • 14
    • 79952823629 scopus 로고    scopus 로고
    • The diagnosis of Amyotrophic lateral sclerosis in 2010
    • PubMed: 21412713
    • Silani V, Messina S, Poletti B, Morelli C, Doretti A et al. (2011) The diagnosis of Amyotrophic lateral sclerosis in 2010. Arch Ital Biol 149: 5-27. PubMed: 21412713.
    • (2011) Arch Ital Biol , vol.149 , pp. 5-27
    • Silani, V.1    Messina, S.2    Poletti, B.3    Morelli, C.4    Doretti, A.5
  • 15
    • 23944520883 scopus 로고    scopus 로고
    • HUPO Plasma Proteome Project specimen collection and handling: Towards the standardization of parameters for plasma proteome samples
    • doi:10.1002/pmic.200401245. PubMed: 16052621
    • Rai AJ, Gelfand CA, Haywood BC, Warunek DJ, Yi J et al. (2005) HUPO Plasma Proteome Project specimen collection and handling: towards the standardization of parameters for plasma proteome samples. Proteomics 5: 3262-3277. doi:10.1002/pmic.200401245. PubMed: 16052621.
    • (2005) Proteomics , vol.5 , pp. 3262-3277
    • Rai, A.J.1    Gelfand, C.A.2    Haywood, B.C.3    Warunek, D.J.4    Yi, J.5
  • 16
    • 23944456398 scopus 로고    scopus 로고
    • Correcting common errors in identifying cancer-specific serum peptide signatures
    • P doi:10.1021/pr050034b. PubMed: 16083255
    • Villanueva J, Philip J, Chaparro CA, Li Y, Toledo-Crow R et al. P (2005) Correcting common errors in identifying cancer-specific serum peptide signatures. J Proteome Res 4: 1060-1072. doi:10.1021/pr050034b. PubMed: 16083255.
    • (2005) J Proteome Res , vol.4 , pp. 1060-1072
    • Villanueva, J.1    Philip, J.2    Chaparro, C.A.3    Li, Y.4    Toledo-Crow, R.5
  • 17
    • 31044436630 scopus 로고    scopus 로고
    • Differential exoprotease activities confer tumor-specific serum peptidome patterns
    • PubMed: 16395409
    • Villanueva J, Shaffer DR, Philip J, Chaparro CA, Erdjument-Bromage H et al. (2006) Differential exoprotease activities confer tumor-specific serum peptidome patterns. J Clin Invest 116: 271-284. PubMed: 16395409.
    • (2006) J Clin Invest , vol.116 , pp. 271-284
    • Villanueva, J.1    Shaffer, D.R.2    Philip, J.3    Chaparro, C.A.4    Erdjument-Bromage, H.5
  • 18
    • 73549124550 scopus 로고    scopus 로고
    • Identification of complement C3f-desArg and its derivative for acute leukemia diagnosis and minimal residual disease assessment
    • doi:10.1002/pmic.200900513. PubMed: 19882663
    • Liang T, Wang N, Li W, Li A, Wang J et al. (2010) Identification of complement C3f-desArg and its derivative for acute leukemia diagnosis and minimal residual disease assessment. Proteomics 10: 90-98. doi:10.1002/pmic. 200900513. PubMed: 19882663.
    • (2010) Proteomics , vol.10 , pp. 90-98
    • Liang, T.1    Wang, N.2    Li, W.3    Li, A.4    Wang, J.5
  • 19
    • 77957229036 scopus 로고    scopus 로고
    • Peptides in low molecular weight fraction of serum associated with hepatocellular carcinoma
    • doi:10.1155/2010/681876. PubMed: 20826913
    • An Y, Bekesova S, Edwards N, Goldman R (2010) Peptides in low molecular weight fraction of serum associated with hepatocellular carcinoma. Dis Markers 29: 11-20. doi:10.1155/2010/681876. PubMed: 20826913.
    • (2010) Dis Markers , vol.29 , pp. 11-20
    • An, Y.1    Bekesova, S.2    Edwards, N.3    Goldman, R.4
  • 20
    • 71949093492 scopus 로고    scopus 로고
    • Comprehensive analysis of short peptides in sera from patients with IgA nephropathy
    • doi:10.1002/rcm.4315. PubMed: 19902551
    • Kaneshiro N, Xiang Y, Nagai K, Kurokawa MS, Okamoto K et al. (2009) Comprehensive analysis of short peptides in sera from patients with IgA nephropathy. Rapid Commun Mass Spectrom 23: 3720-3728. doi:10.1002/rcm.4315. PubMed: 19902551.
    • (2009) Rapid Commun Mass Spectrom , vol.23 , pp. 3720-3728
    • Kaneshiro, N.1    Xiang, Y.2    Nagai, K.3    Kurokawa, M.S.4    Okamoto, K.5
  • 22
    • 77950642135 scopus 로고    scopus 로고
    • High-yield peptide-extraction method for the discovery of subnanomolar biomarkers from small serum samples
    • doi:10.1021/pr9008018. PubMed: 20184378
    • Kawashima Y, Fukutomi T, Tomonaga T, Takahashi H, Nomura F et al. (2010) High-yield peptide-extraction method for the discovery of subnanomolar biomarkers from small serum samples. J Proteome Res 9: 1694-1705. doi:10.1021/pr9008018. PubMed: 20184378.
    • (2010) J Proteome Res , vol.9 , pp. 1694-1705
    • Kawashima, Y.1    Fukutomi, T.2    Tomonaga, T.3    Takahashi, H.4    Nomura, F.5
  • 23
    • 48249157877 scopus 로고    scopus 로고
    • Beyond Hemostasis: The Role of Platelets in Inflammation, Malignancy and Infection
    • doi:10.2174/187152908784533739. PubMed: 18537597
    • McNicol A, Israels SJ (2008) Beyond Hemostasis: The Role of Platelets in Inflammation, Malignancy and Infection. Curr Drug Targets Cardiovasc Haematol Disord: 8: 99-117. doi:10.2174/187152908784533739. PubMed: 18537597.
    • (2008) Curr Drug Targets Cardiovasc Haematol Disord , vol.8 , pp. 99-117
    • McNicol, A.1    Israels, S.J.2
  • 24
    • 66649092902 scopus 로고    scopus 로고
    • Serum peptidome profiling revealed platelet factor 4 as a potential discriminating Peptide associated with pancreatic cancer
    • doi:10.1158/1078-0432.CCR-08-2701. PubMed: 19470732
    • Fiedler GM, Leichtle AB, Kase J, Baumann S, Ceglarek U et al. (2009) Serum peptidome profiling revealed platelet factor 4 as a potential discriminating Peptide associated with pancreatic cancer. Clin Cancer Res 15: 3812-3819. doi:10.1158/1078-0432.CCR-08-2701. PubMed: 19470732.
    • (2009) Clin Cancer Res , vol.15 , pp. 3812-3819
    • Fiedler, G.M.1    Leichtle, A.B.2    Kase, J.3    Baumann, S.4    Ceglarek, U.5
  • 25
    • 7244231204 scopus 로고    scopus 로고
    • Platelets release CXCL4L1, a nonallelic variant of the chemokine platelet factor-4/CXCL4 and potent inhibitor of angiogenesis
    • PubMed: 15459074
    • Struyf S, Burdick MD, Proost P, Van Damme J, Strieter RM (2004) Platelets release CXCL4L1, a nonallelic variant of the chemokine platelet factor-4/CXCL4 and potent inhibitor of angiogenesis. Circ-Res 95(5): 855-857. PubMed: 15459074.
    • (2004) Circ-Res , vol.95 , Issue.5 , pp. 855-857
    • Struyf, S.1    Burdick, M.D.2    Proost, P.3    Van Damme, J.4    Strieter, R.M.5
  • 26
    • 84872450682 scopus 로고    scopus 로고
    • Quantitative pattern analysis of the N-terminally processed isoforms of platelet factor-4 in serum
    • doi:10.1002/rcm.6480. PubMed: 23322658
    • Kim JY, Lee JR, Choi S, Kim EM, Jung NK et al. (2013) Quantitative pattern analysis of the N-terminally processed isoforms of platelet factor-4 in serum. Rapid Commun Mass Spectrom 27: 521-530. doi:10.1002/rcm.6480. PubMed: 23322658.
    • (2013) Rapid Commun Mass Spectrom , vol.27 , pp. 521-530
    • Kim, J.Y.1    Lee, J.R.2    Choi, S.3    Kim, E.M.4    Jung, N.K.5
  • 27
    • 77949567308 scopus 로고    scopus 로고
    • Role of the platelet chemokine platelet factor 4 (PF4) in hemostasis and thrombosis
    • doi:10.1016/j.thromres.2009.11.023. PubMed: 20004006
    • Kowalska MA, Rauova L, Poncz M (2010) Role of the platelet chemokine platelet factor 4 (PF4) in hemostasis and thrombosis. Thromb-Res 125: 292-296. doi:10.1016/j.thromres.2009.11.023. PubMed: 20004006.
    • (2010) Thromb-Res , vol.125 , pp. 292-296
    • Kowalska, M.A.1    Rauova, L.2    Poncz, M.3
  • 28
    • 79952243413 scopus 로고    scopus 로고
    • The role of the CXC chemokines platelet factor-4 (CXCL4/PF-4) and its variant (CXCL4L1/PF-4var) in inflammation, angiogenesis and cancer
    • doi:10.1016/j.cytogfr.2010.10.011. PubMed: 21111666
    • Vandercappellen J, Van Damme J, Struyf S (2011) The role of the CXC chemokines platelet factor-4 (CXCL4/PF-4) and its variant (CXCL4L1/PF-4var) in inflammation, angiogenesis and cancer. Cytokine Growth Factor Rev 22: 1-18. doi:10.1016/j.cytogfr.2010.10.011. PubMed: 21111666.
    • (2011) Cytokine Growth Factor Rev , vol.22 , pp. 1-18
    • Vandercappellen, J.1    Van Damme, J.2    Struyf, S.3
  • 29
    • 78149479992 scopus 로고    scopus 로고
    • Interaction of PF4 (CXCL4) with the vasculature: A role in atherosclerosis and angiogenesis
    • doi:10.1160/TH10-03-0193. PubMed: 20806113
    • Aidoudi S, Bikfalvi A (2010) nteraction of PF4 (CXCL4) with the vasculature: a role in atherosclerosis and angiogenesis. Thromb-Haemost 104: 941-948. doi:10.1160/TH10-03-0193. PubMed: 20806113.
    • (2010) Thromb-Haemost , vol.104 , pp. 941-948
    • Aidoudi, S.1    Bikfalvi, A.2
  • 30
    • 84862978546 scopus 로고    scopus 로고
    • Inflammation in neurological and psychiatric diseases
    • doi:10.1007/s10787-012-0124-x. PubMed: 22361843
    • Khansari PS, Sperlagh B (2012) Inflammation in neurological and psychiatric diseases. Inflammopharmacology 20: 103-107. doi:10.1007/s10787-012- 0124-x. PubMed: 22361843.
    • (2012) Inflammopharmacology , vol.20 , pp. 103-107
    • Khansari, P.S.1    Sperlagh, B.2
  • 31
    • 84873278957 scopus 로고    scopus 로고
    • Inflammation and neurovascular changes in amyotrophic lateral sclerosis
    • doi:10.1016/j.mcn.2012.10.008. PubMed: 23110760
    • Evans MC, Couch Y, Sibson N, Turner MR (2013) Inflammation and neurovascular changes in amyotrophic lateral sclerosis. Mol-Cell Neurosci 53: 34-41. doi:10.1016/j.mcn.2012.10.008. PubMed: 23110760.
    • (2013) Mol-Cell Neurosci , vol.53 , pp. 34-41
    • Evans, M.C.1    Couch, Y.2    Sibson, N.3    Turner, M.R.4
  • 32
    • 80051551970 scopus 로고    scopus 로고
    • The blood-spinal cord barrier: Morphology and clinical implications
    • PubMed: 21674586
    • Bartanusz V, Jezova D, Alajajian B, Digicaylioglu M (2011) The blood-spinal cord barrier: morphology and clinical implications. Ann-Neurol 2: 194-206. PubMed: 21674586.
    • (2011) Ann-Neurol , vol.2 , pp. 194-206
    • Bartanusz, V.1    Jezova, D.2    Alajajian, B.3    Digicaylioglu, M.4
  • 33
    • 77955577646 scopus 로고    scopus 로고
    • A possible haemodynamic mechanism for amyotrophic lateral sclerosis
    • doi:10.1016/j.mehy.2010.03.017. PubMed: 20400230
    • Arhart RW (2010) A possible haemodynamic mechanism for amyotrophic lateral sclerosis. Med-Hypotheses 75: 341-346. doi:10.1016/j.mehy.2010.03.017. PubMed: 20400230.
    • (2010) Med-Hypotheses , vol.75 , pp. 341-346
    • Arhart, R.W.1
  • 34
    • 84876176479 scopus 로고    scopus 로고
    • Role of platelets in neurodegenerative diseases: A universal pathophysiology
    • doi:10.3109/00207454.2012.751534. PubMed: 23301959
    • Behari M, Shrivastava M (2013) Role of platelets in neurodegenerative diseases: a universal pathophysiology. Int J Neurosci 123: 287-299. doi:10.3109/00207454.2012.751534. PubMed: 23301959.
    • (2013) Int J Neurosci , vol.123 , pp. 287-299
    • Behari, M.1    Shrivastava, M.2
  • 35
    • 79851474876 scopus 로고    scopus 로고
    • Ultrastructural variations in platelets and platelet mitochondria: A novel feature in amyotrophic lateral sclerosis
    • doi:10.3109/01913123.2010.541985. PubMed: 21299344
    • Shrivastava M, Das TK, Behari M, Pati U, Vivekanandhan S (2011) Ultrastructural variations in platelets and platelet mitochondria: a novel feature in amyotrophic lateral sclerosis. Ultrastruct Pathol 35: 52-59. doi:10.3109/01913123.2010.541985. PubMed: 21299344.
    • (2011) Ultrastruct Pathol , vol.35 , pp. 52-59
    • Shrivastava, M.1    Das, T.K.2    Behari, M.3    Pati, U.4    Vivekanandhan, S.5
  • 36
    • 78149459499 scopus 로고    scopus 로고
    • Platelet Serotonin Level Predicts Survival in Amyotrophic Lateral Sclerosis
    • doi:10.1371/journal.pone.0013346. PubMed: 20967129
    • Dupuis L, Spreux-Varoquaux O, Bensimon G, Jullien P, Lacomblez L et al. (2010) Platelet Serotonin Level Predicts Survival in Amyotrophic Lateral Sclerosis. PLOS ONE 5(10): e13346. doi:10.1371/journal.pone.0013346. PubMed: 20967129.
    • (2010) PLOS ONE , vol.5 , Issue.10
    • Dupuis, L.1    Spreux-Varoquaux, O.2    Bensimon, G.3    Jullien, P.4    Lacomblez, L.5


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