메뉴 건너뛰기




Volumn 22, Issue 1, 2014, Pages 59-69

PKA RIα homodimer structure reveals an intermolecular interface with implications for cooperative cAMP binding and carney complex disease

Author keywords

[No Author keywords available]

Indexed keywords

CYCLIC AMP; CYCLIC AMP DEPENDENT PROTEIN KINASE REGULATORY SUBUNIT IALPHA; HETERODIMER; HOMODIMER; ISOENZYME; MONOMER;

EID: 84891847967     PISSN: 09692126     EISSN: 18784186     Source Type: Journal    
DOI: 10.1016/j.str.2013.10.012     Document Type: Article
Times cited : (38)

References (52)
  • 2
    • 0036293582 scopus 로고    scopus 로고
    • The essential role of RI alpha in the maintenance of regulated PKA activity
    • P.S. Amieux, and G.S. McKnight The essential role of RI alpha in the maintenance of regulated PKA activity Ann. N Y Acad. Sci. 968 2002 75 95
    • (2002) Ann. N y Acad. Sci. , vol.968 , pp. 75-95
    • Amieux, P.S.1    McKnight, G.S.2
  • 3
    • 79953170596 scopus 로고    scopus 로고
    • Cyclic AMP analog blocks kinase activation by stabilizing inactive conformation: Conformational selection highlights a new concept in allosteric inhibitor design
    • M110 004390
    • S. Badireddy, G. Yunfeng, M. Ritchie, P. Akamine, J. Wu, C.W. Kim, S.S. Taylor, L. Qingsong, K. Swaminathan, and G.S. Anand Cyclic AMP analog blocks kinase activation by stabilizing inactive conformation: conformational selection highlights a new concept in allosteric inhibitor design Mol Cell Proteomics 10 2011 M110 004390
    • (2011) Mol Cell Proteomics , vol.10
    • Badireddy, S.1    Yunfeng, G.2    Ritchie, M.3    Akamine, P.4    Wu, J.5    Kim, C.W.6    Taylor, S.S.7    Qingsong, L.8    Swaminathan, K.9    Anand, G.S.10
  • 4
    • 0025940335 scopus 로고
    • The tissue-specific extinguisher locus TSE1 encodes a regulatory subunit of cAMP-dependent protein kinase
    • M. Boshart, F. Weih, M. Nichols, and G. Schütz The tissue-specific extinguisher locus TSE1 encodes a regulatory subunit of cAMP-dependent protein kinase Cell 66 1991 849 859
    • (1991) Cell , vol.66 , pp. 849-859
    • Boshart, M.1    Weih, F.2    Nichols, M.3    Schütz, G.4
  • 5
    • 70350025561 scopus 로고    scopus 로고
    • Novel isoform-specific interfaces revealed by PKA RIIbeta holoenzyme structures
    • S.H. Brown, J. Wu, C. Kim, K. Alberto, and S.S. Taylor Novel isoform-specific interfaces revealed by PKA RIIbeta holoenzyme structures J. Mol. Biol. 393 2009 1070 1082
    • (2009) J. Mol. Biol. , vol.393 , pp. 1070-1082
    • Brown, S.H.1    Wu, J.2    Kim, C.3    Alberto, K.4    Taylor, S.S.5
  • 6
    • 0024695482 scopus 로고
    • Distinct patterns of cAMP-dependent protein kinase gene expression in mouse brain
    • G. Cadd, and G.S. McKnight Distinct patterns of cAMP-dependent protein kinase gene expression in mouse brain Neuron 3 1989 71 79
    • (1989) Neuron , vol.3 , pp. 71-79
    • Cadd, G.1    McKnight, G.S.2
  • 7
    • 0034642224 scopus 로고    scopus 로고
    • Consequences of cAMP-binding site mutations on the structural stability of the type i regulatory subunit of cAMP-dependent protein kinase
    • J.M. Cànaves, D.A. Leon, and S.S. Taylor Consequences of cAMP-binding site mutations on the structural stability of the type I regulatory subunit of cAMP-dependent protein kinase Biochemistry 39 2000 15022 15031
    • (2000) Biochemistry , vol.39 , pp. 15022-15031
    • Cànaves, J.M.1    Leon, D.A.2    Taylor, S.S.3
  • 8
    • 72149087959 scopus 로고    scopus 로고
    • Sensing domain dynamics in protein kinase A-Ialpha complexes by solution X-ray scattering
    • C.Y. Cheng, J. Yang, S.S. Taylor, and D.K. Blumenthal Sensing domain dynamics in protein kinase A-Ialpha complexes by solution X-ray scattering J. Biol. Chem. 284 2009 35916 35925
    • (2009) J. Biol. Chem. , vol.284 , pp. 35916-35925
    • Cheng, C.Y.1    Yang, J.2    Taylor, S.S.3    Blumenthal, D.K.4
  • 10
    • 0035148589 scopus 로고    scopus 로고
    • Molecular basis for regulatory subunit diversity in cAMP-dependent protein kinase: Crystal structure of the type II beta regulatory subunit
    • T.C. Diller, Madhusudan, N.H. Xuong, and S.S. Taylor Molecular basis for regulatory subunit diversity in cAMP-dependent protein kinase: crystal structure of the type II beta regulatory subunit Structure 9 2001 73 82
    • (2001) Structure , vol.9 , pp. 73-82
    • Diller, T.C.1    Madhusudan2    Xuong, N.H.3    Taylor, S.S.4
  • 12
    • 0015814598 scopus 로고
    • Physical properties of a purified cyclic adenosine 3′:5′- monophosphate-dependent protein kinase from bovine heart muscle
    • J. Erlichman, C.S. Rubin, and O.M. Rosen Physical properties of a purified cyclic adenosine 3′:5′-monophosphate-dependent protein kinase from bovine heart muscle J. Biol. Chem. 248 1973 7607 7609
    • (1973) J. Biol. Chem. , vol.248 , pp. 7607-7609
    • Erlichman, J.1    Rubin, C.S.2    Rosen, O.M.3
  • 13
    • 39149133729 scopus 로고    scopus 로고
    • In vitro functional studies of naturally occurring pathogenic PRKAR1A mutations that are not subject to nonsense mRNA decay
    • E.L. Greene, A.D. Horvath, M. Nesterova, C. Giatzakis, I. Bossis, and C.A. Stratakis In vitro functional studies of naturally occurring pathogenic PRKAR1A mutations that are not subject to nonsense mRNA decay Hum. Mutat. 29 2008 633 639
    • (2008) Hum. Mutat. , vol.29 , pp. 633-639
    • Greene, E.L.1    Horvath, A.D.2    Nesterova, M.3    Giatzakis, C.4    Bossis, I.5    Stratakis, C.A.6
  • 14
    • 0028305073 scopus 로고
    • Crosstalk between domains in the regulatory subunit of cAMP-dependent protein kinase: Influence of amino terminus on cAMP binding and holoenzyme formation
    • F.W. Herberg, W.R. Dostmann, M. Zorn, S.J. Davis, and S.S. Taylor Crosstalk between domains in the regulatory subunit of cAMP-dependent protein kinase: influence of amino terminus on cAMP binding and holoenzyme formation Biochemistry 33 1994 7485 7494
    • (1994) Biochemistry , vol.33 , pp. 7485-7494
    • Herberg, F.W.1    Dostmann, W.R.2    Zorn, M.3    Davis, S.J.4    Taylor, S.S.5
  • 15
    • 0029932259 scopus 로고    scopus 로고
    • Active site mutations define the pathway for the cooperative activation of cAMP-dependent protein kinase
    • F.W. Herberg, S.S. Taylor, and W.R. Dostmann Active site mutations define the pathway for the cooperative activation of cAMP-dependent protein kinase Biochemistry 35 1996 2934 2942
    • (1996) Biochemistry , vol.35 , pp. 2934-2942
    • Herberg, F.W.1    Taylor, S.S.2    Dostmann, W.R.3
  • 18
    • 0025944522 scopus 로고
    • Subtractive hybridization cloning of a tissue-specific extinguisher: TSE1 encodes a regulatory subunit of protein kinase A
    • K.W. Jones, M.H. Shapero, M. Chevrette, and R.E. Fournier Subtractive hybridization cloning of a tissue-specific extinguisher: TSE1 encodes a regulatory subunit of protein kinase A Cell 66 1991 861 872
    • (1991) Cell , vol.66 , pp. 861-872
    • Jones, K.W.1    Shapero, M.H.2    Chevrette, M.3    Fournier, R.E.4
  • 19
    • 0036291454 scopus 로고    scopus 로고
    • Deficient protein kinase a in systemic lupus erythematosus: A disorder of T lymphocyte signal transduction
    • G.M. Kammer Deficient protein kinase a in systemic lupus erythematosus: a disorder of T lymphocyte signal transduction Ann. N Y Acad. Sci. 968 2002 96 105
    • (2002) Ann. N y Acad. Sci. , vol.968 , pp. 96-105
    • Kammer, G.M.1
  • 20
    • 0030587119 scopus 로고    scopus 로고
    • Deficient type i protein kinase A isozyme activity in systemic lupus erythematosus T lymphocytes: II. Abnormal isozyme kinetics
    • G.M. Kammer, I.U. Khan, J.A. Kammer, I. Olorenshaw, and D. Mathis Deficient type I protein kinase A isozyme activity in systemic lupus erythematosus T lymphocytes: II. Abnormal isozyme kinetics J. Immunol. 157 1996 2690 2698
    • (1996) J. Immunol. , vol.157 , pp. 2690-2698
    • Kammer, G.M.1    Khan, I.U.2    Kammer, J.A.3    Olorenshaw, I.4    Mathis, D.5
  • 21
    • 13244291292 scopus 로고    scopus 로고
    • Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKA
    • C. Kim, N.H. Xuong, and S.S. Taylor Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKA Science 307 2005 690 696
    • (2005) Science , vol.307 , pp. 690-696
    • Kim, C.1    Xuong, N.H.2    Taylor, S.S.3
  • 22
    • 34548611290 scopus 로고    scopus 로고
    • PKA-I holoenzyme structure reveals a mechanism for cAMP-dependent activation
    • C. Kim, C.Y. Cheng, S.A. Saldanha, and S.S. Taylor PKA-I holoenzyme structure reveals a mechanism for cAMP-dependent activation Cell 130 2007 1032 1043
    • (2007) Cell , vol.130 , pp. 1032-1043
    • Kim, C.1    Cheng, C.Y.2    Saldanha, S.A.3    Taylor, S.S.4
  • 24
    • 42949174618 scopus 로고    scopus 로고
    • A generalized allosteric mechanism for cis-regulated cyclic nucleotide binding domains
    • A.P. Kornev, S.S. Taylor, and L.F. Ten Eyck A generalized allosteric mechanism for cis-regulated cyclic nucleotide binding domains PLoS Comput. Biol. 4 2008 e1000056
    • (2008) PLoS Comput. Biol. , vol.4 , pp. 1000056
    • Kornev, A.P.1    Taylor, S.S.2    Ten Eyck, L.F.3
  • 25
    • 34548232365 scopus 로고    scopus 로고
    • Inference of macromolecular assemblies from crystalline state
    • E. Krissinel, and K. Henrick Inference of macromolecular assemblies from crystalline state J. Mol. Biol. 372 2007 774 797
    • (2007) J. Mol. Biol. , vol.372 , pp. 774-797
    • Krissinel, E.1    Henrick, K.2
  • 26
    • 0014653971 scopus 로고
    • Cyclic nucleotide-dependent protein kinases. IV. Widespread occurrence of adenosine 3′,5′-monophosphate-dependent protein kinase in various tissues and phyla of the animal kingdom
    • J.F. Kuo, and P. Greengard Cyclic nucleotide-dependent protein kinases. IV. Widespread occurrence of adenosine 3′,5′-monophosphate-dependent protein kinase in various tissues and phyla of the animal kingdom Proc. Natl. Acad. Sci. USA 64 1969 1349 1355
    • (1969) Proc. Natl. Acad. Sci. USA , vol.64 , pp. 1349-1355
    • Kuo, J.F.1    Greengard, P.2
  • 27
    • 0000243829 scopus 로고
    • PROCHECK - A program to check the stereochemical quality of protein structures
    • R.A. Laskowski, M.W. Macarthur, D.S. Moss, and J.M. Thornton PROCHECK - a program to check the stereochemical quality of protein structures J. Appl. Cryst. 26 1993 283 291
    • (1993) J. Appl. Cryst. , vol.26 , pp. 283-291
    • Laskowski, R.A.1    MacArthur, M.W.2    Moss, D.S.3    Thornton, J.M.4
  • 28
    • 0033136320 scopus 로고    scopus 로고
    • Diminished levels of protein kinase A RI alpha and RI beta transcripts and proteins in systemic lupus erythematosus T lymphocytes
    • D. Laxminarayana, I.U. Khan, N. Mishra, I. Olorenshaw, K. Taskén, and G.M. Kammer Diminished levels of protein kinase A RI alpha and RI beta transcripts and proteins in systemic lupus erythematosus T lymphocytes J. Immunol. 162 1999 5639 5648
    • (1999) J. Immunol. , vol.162 , pp. 5639-5648
    • Laxminarayana, D.1    Khan, I.U.2    Mishra, N.3    Olorenshaw, I.4    Taskén, K.5    Kammer, G.M.6
  • 29
    • 0034673984 scopus 로고    scopus 로고
    • Probing the multidomain structure of the type i regulatory subunit of cAMP-dependent protein kinase using mutational analysis: Role and environment of endogenous tryptophans
    • D.A. Leon, J.M. Canaves, and S.S. Taylor Probing the multidomain structure of the type I regulatory subunit of cAMP-dependent protein kinase using mutational analysis: role and environment of endogenous tryptophans Biochemistry 39 2000 5662 5671
    • (2000) Biochemistry , vol.39 , pp. 5662-5671
    • Leon, D.A.1    Canaves, J.M.2    Taylor, S.S.3
  • 30
    • 0034687725 scopus 로고    scopus 로고
    • Consequences of cAMP and catalytic-subunit binding on the flexibility of the A-kinase regulatory subunit
    • F. Li, M. Gangal, J.M. Jones, J. Deich, K.E. Lovett, S.S. Taylor, and D.A. Johnson Consequences of cAMP and catalytic-subunit binding on the flexibility of the A-kinase regulatory subunit Biochemistry 39 2000 15626 15632
    • (2000) Biochemistry , vol.39 , pp. 15626-15632
    • Li, F.1    Gangal, M.2    Jones, J.M.3    Deich, J.4    Lovett, K.E.5    Taylor, S.S.6    Johnson, D.A.7
  • 31
    • 0036297976 scopus 로고    scopus 로고
    • Regulatory subunits of PKA and breast cancer
    • W.R. Miller Regulatory subunits of PKA and breast cancer Ann. N Y Acad. Sci. 968 2002 37 48
    • (2002) Ann. N y Acad. Sci. , vol.968 , pp. 37-48
    • Miller, W.R.1
  • 33
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode
    • Z.M.W. Otwinowski Processing of X-ray diffraction data collected in oscillation mode Methods Enzymol. 276 1997 307 326
    • (1997) Methods Enzymol. , vol.276 , pp. 307-326
    • Otwinowski, Z.M.W.1
  • 34
    • 0018786508 scopus 로고
    • Relationships between structural domains and function in the regulatory subunit of cAMP-dependent protein kinases i and II from porcine skeletal muscle
    • R.L. Potter, and S.S. Taylor Relationships between structural domains and function in the regulatory subunit of cAMP-dependent protein kinases I and II from porcine skeletal muscle J. Biol. Chem. 254 1979 2413 2418
    • (1979) J. Biol. Chem. , vol.254 , pp. 2413-2418
    • Potter, R.L.1    Taylor, S.S.2
  • 35
    • 0019164981 scopus 로고
    • Studies of functional domains of the regulatory subunit from cAMP-dependent protein kinase isozyme i
    • S.R. Rannels, and J.D. Corbin Studies of functional domains of the regulatory subunit from cAMP-dependent protein kinase isozyme I J. Cyclic Nucleotide Res. 6 1980 201 215
    • (1980) J. Cyclic Nucleotide Res. , vol.6 , pp. 201-215
    • Rannels, S.R.1    Corbin, J.D.2
  • 37
    • 0018801622 scopus 로고
    • Characterization and comparison of membrane-associated and cytosolic cAMP-dependent protein kinases. Studies on human erythrocyte protein kinases
    • C.S. Rubin Characterization and comparison of membrane-associated and cytosolic cAMP-dependent protein kinases. Studies on human erythrocyte protein kinases J. Biol. Chem. 254 1979 12439 12449
    • (1979) J. Biol. Chem. , vol.254 , pp. 12439-12449
    • Rubin, C.S.1
  • 38
    • 33845524054 scopus 로고    scopus 로고
    • Assay principle for modulators of protein-protein interactions and its application to non-ATP-competitive ligands targeting protein kinase A
    • S.A. Saldanha, G. Kaler, H.B. Cottam, R. Abagyan, and S.S. Taylor Assay principle for modulators of protein-protein interactions and its application to non-ATP-competitive ligands targeting protein kinase A Anal. Chem. 78 2006 8265 8272
    • (2006) Anal. Chem. , vol.78 , pp. 8265-8272
    • Saldanha, S.A.1    Kaler, G.2    Cottam, H.B.3    Abagyan, R.4    Taylor, S.S.5
  • 39
    • 77954280480 scopus 로고    scopus 로고
    • FoXS: A web server for rapid computation and fitting of SAXS profiles
    • D. Schneidman-Duhovny, M. Hammel, and A. Sali FoXS: a web server for rapid computation and fitting of SAXS profiles Nucleic Acids Res. 38 Web Server issue 2010 W540 W544
    • (2010) Nucleic Acids Res. , vol.38 , Issue.WEB SERVER ISSUE
    • Schneidman-Duhovny, D.1    Hammel, M.2    Sali, A.3
  • 40
    • 84882940564 scopus 로고    scopus 로고
    • Accurate SAXS profile computation and its assessment by contrast variation experiments
    • D. Schneidman-Duhovny, M. Hammel, J.A. Tainer, and A. Sali Accurate SAXS profile computation and its assessment by contrast variation experiments Biophys. J. 105 2013 962 974
    • (2013) Biophys. J. , vol.105 , pp. 962-974
    • Schneidman-Duhovny, D.1    Hammel, M.2    Tainer, J.A.3    Sali, A.4
  • 41
    • 77951623055 scopus 로고    scopus 로고
    • Super-resolution biomolecular crystallography with low-resolution data
    • G.F. Schröder, M. Levitt, and A.T. Brunger Super-resolution biomolecular crystallography with low-resolution data Nature 464 2010 1218 1222
    • (2010) Nature , vol.464 , pp. 1218-1222
    • Schröder, G.F.1    Levitt, M.2    Brunger, A.T.3
  • 43
    • 0026910457 scopus 로고
    • Determination of the regularization parameter in indirect-transform methods using perceptual criteria
    • D.I. Svergun Determination of the regularization parameter in indirect-transform methods using perceptual criteria J. Appl. Cryst. 25 1992 495 503
    • (1992) J. Appl. Cryst. , vol.25 , pp. 495-503
    • Svergun, D.I.1
  • 45
    • 1842575826 scopus 로고    scopus 로고
    • Conformational differences among solution structures of the type Ialpha, IIalpha and IIbeta protein kinase A regulatory subunit homodimers: Role of the linker regions
    • D. Vigil, D.K. Blumenthal, W.T. Heller, S. Brown, J.M. Canaves, S.S. Taylor, and J. Trewhella Conformational differences among solution structures of the type Ialpha, IIalpha and IIbeta protein kinase A regulatory subunit homodimers: role of the linker regions J. Mol. Biol. 337 2004 1183 1194
    • (2004) J. Mol. Biol. , vol.337 , pp. 1183-1194
    • Vigil, D.1    Blumenthal, D.K.2    Heller, W.T.3    Brown, S.4    Canaves, J.M.5    Taylor, S.S.6    Trewhella, J.7
  • 46
    • 0014409394 scopus 로고
    • An adenosine 3′,5′-monophosphate-dependant protein kinase from rabbit skeletal muscle
    • D.A. Walsh, J.P. Perkins, and E.G. Krebs An adenosine 3′,5′-monophosphate-dependant protein kinase from rabbit skeletal muscle J. Biol. Chem. 243 1968 3763 3765
    • (1968) J. Biol. Chem. , vol.243 , pp. 3763-3765
    • Walsh, D.A.1    Perkins, J.P.2    Krebs, E.G.3
  • 47
    • 2942527724 scopus 로고    scopus 로고
    • RIalpha subunit of PKA: A cAMP-free structure reveals a hydrophobic capping mechanism for docking cAMP into site B
    • J. Wu, S. Brown, N.H. Xuong, and S.S. Taylor RIalpha subunit of PKA: a cAMP-free structure reveals a hydrophobic capping mechanism for docking cAMP into site B Structure 12 2004 1057 1065
    • (2004) Structure , vol.12 , pp. 1057-1065
    • Wu, J.1    Brown, S.2    Xuong, N.H.3    Taylor, S.S.4
  • 48
    • 2542523982 scopus 로고    scopus 로고
    • Crystal structures of RIalpha subunit of cyclic adenosine 5′-monophosphate (cAMP)-dependent protein kinase complexed with (Rp)-adenosine 3′,5′-cyclic monophosphothioate and (Sp)-adenosine 3′,5′-cyclic monophosphothioate, the phosphothioate analogues of cAMP
    • J. Wu, J.M. Jones, X. Nguyen-Huu, L.F. Ten Eyck, and S.S. Taylor Crystal structures of RIalpha subunit of cyclic adenosine 5′-monophosphate (cAMP)-dependent protein kinase complexed with (Rp)-adenosine 3′,5′-cyclic monophosphothioate and (Sp)-adenosine 3′,5′-cyclic monophosphothioate, the phosphothioate analogues of cAMP Biochemistry 43 2004 6620 6629
    • (2004) Biochemistry , vol.43 , pp. 6620-6629
    • Wu, J.1    Jones, J.M.2    Nguyen-Huu, X.3    Ten Eyck, L.F.4    Taylor, S.S.5
  • 49
    • 35348885465 scopus 로고    scopus 로고
    • PKA type IIalpha holoenzyme reveals a combinatorial strategy for isoform diversity
    • J. Wu, S.H. Brown, S. von Daake, and S.S. Taylor PKA type IIalpha holoenzyme reveals a combinatorial strategy for isoform diversity Science 318 2007 274 279
    • (2007) Science , vol.318 , pp. 274-279
    • Wu, J.1    Brown, S.H.2    Von Daake, S.3    Taylor, S.S.4
  • 50
    • 67649443050 scopus 로고    scopus 로고
    • The Carney complex gene PRKAR1A plays an essential role in cardiac development and myxomagenesis
    • Z. Yin, and L.S. Kirschner The Carney complex gene PRKAR1A plays an essential role in cardiac development and myxomagenesis Trends Cardiovasc. Med. 19 2009 44 49
    • (2009) Trends Cardiovasc. Med. , vol.19 , pp. 44-49
    • Yin, Z.1    Kirschner, L.S.2
  • 52
    • 0018786526 scopus 로고
    • Structural comparisons of cAMP-dependent protein kinases i and II from porcine skeletal muscle
    • M.J. Zoller, A.R. Kerlavage, and S.S. Taylor Structural comparisons of cAMP-dependent protein kinases I and II from porcine skeletal muscle J. Biol. Chem. 254 1979 2408 2412
    • (1979) J. Biol. Chem. , vol.254 , pp. 2408-2412
    • Zoller, M.J.1    Kerlavage, A.R.2    Taylor, S.S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.