Synchrotron X-ray footprinting on tour

Journal of Synchrotron Radiation

Volumn 21, Issue 1, 2014, Pages 24-31

  Bohon, Jen ^a,b   D'Mello, Rhijuta ^a,b   Ralston, Corie ^c   Gupta, Sayan ^c   Chance, Mark R ^a,b  

^a CASE WESTERN RESERVE UNIVERSITY   (United States)

^b CASE WESTERN RESERVE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

Author keywords

beamlines; footprinting; radiolysis; structural biology; X rays

Indexed keywords

BEAM-LINES; COMPLEX BIOLOGICAL SYSTEMS; EXPOSURE ENVIRONMENT; FOOTPRINTING; NATIONAL SYNCHROTRON LIGHT SOURCES; STRUCTURAL BIOLOGY; STRUCTURE AND DYNAMICS; TECHNOLOGY DEVELOPMENT;

NUCLEIC ACIDS; RADIOLYSIS; X RAYS;

RADIATION CHEMISTRY;

CYTOCHROME C; NUCLEIC ACID;

ARTICLE; BEAMLINES; CHEMISTRY; FOOTPRINTING; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; RADIOLYSIS; STRUCTURAL BIOLOGY; SYNCHROTRON; TANDEM MASS SPECTROMETRY; X RAY;

BEAMLINES; FOOTPRINTING; RADIOLYSIS; STRUCTURAL BIOLOGY; X-RAYS;

CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CYTOCHROMES C; NUCLEIC ACIDS; SYNCHROTRONS; TANDEM MASS SPECTROMETRY; X-RAYS;

EID: 84891594049     PISSN: 09090495     EISSN: 16005775     Source Type: Journal    
DOI: 10.1107/S1600577513024715     Document Type: Article

References (36)

1. Adilakshmi, T., Bellur, D. L. & Woodson, S. A. (2008). Nature (London), 455, 1268-1272.
2. Adilakshmi, T., Lease, R. A. &Woodson, S. A. (2006b). Nucleic Acids Res. 34, e64.
3. Adilakshmi, T., Ramaswamy, P. & Woodson, S. A. (2006a). J. Mol. Biol. 351, 508-519.
4. Adilakshmi, T., Soper, S. F. & Woodson, S. A. (2009). Methods Enzymol. 468, 239-258.
5. Angel, T. E., Gupta, S., Jastrzebska, B., Palczewski, K. & Chance, M. R. (2009). Proc. Natl Acad. Sci. USA, 106, 14367-14372.
6. Bohon, J., Jennings, L. D., Phillips, C. M., Licht, S. & Chance, M. R. (2008). Structure, 16, 1157-1165.
7. Brenowitz, M., Chance, M. R., Dhavan, G. & Takamoto, K. (2002). Curr. Opin. Struct. Biol. 12, 648-653.
8. Brenowitz, M., Erie, D. A. & Chance, M. R. (2005). Proc. Natl Acad. Sci. USA, 102, 4659-4660.
9. Chaudhuri, B. N., Gupta, S., Urban, V. S., Chance, M. R., D'Mello, R., Smith, L., Lyons, K. & Gee, J. (2011). Biochemistry, 50, 1799-1807.
10. Deras, M. L., Brenowitz, M., Ralston, C. Y., Chance, M. R. & Woodson, S. A. (2000). Biochemistry, 39, 10975-10985.
11. Dhavan, G. M., Crothers, D. M., Chance, M. R. & Brenowitz, M. (2002). J. Mol. Biol. 315, 1027-1037.
12. Guan, J. Q., Almo, S. C. & Chance, M. R. (2004). Acc. Chem. Res. 37, 221-229.
13. Guan, J. Q., Takamoto, K., Almo, S. C., Reisler, E. & Chance, M. R. (2005). Biochemistry, 44, 3166-3175.
14. Gupta, S., Bavro, V. N., D'Mello, R., Tucker, S. J., Vénien-Bryan, C. & Chance, M. R. (2010). Structure, 18, 839-846.
15. Gupta, S., D'Mello, R. & Chance, M. R. (2012). Proc. Natl Acad. Sci. USA, 109, 14882-14887.
16. Gupta, S., Sullivan, M., Toomey, J., Kiselar, J. & Chance, M. R. (2007). J. Synchrotron Rad. 14, 233-243.
17. Jennings, L. D., Bohon, J., Chance, M. R. & Licht, S. (2008). Biochemistry, 47, 11031-11040.
18. Kamal, J. K., Benchaar, S. A., Takamoto, K., Reisler, E. & Chance, M. R. (2007). Proc. Natl Acad. Sci. USA, 104, 7910-7915.
19. Kamal, J. K. & Chance, M. R. (2008). Protein Sci. 17, 79-94.
20. Kiselar, J. G., Janmey, P. A., Almo, S. C. & Chance, M. R. (2003a). Mol. Cell. Proteomics, 2, 1120-1132.
21. Kiselar, J. G., Janmey, P. A., Almo, S. C. & Chance, M. R. (2003b). Proc. Natl Acad. Sci. USA, 100, 3942-3947.
22. Kiselar, J. G., Mahaffy, R., Pollard, T. D., Almo, S. C. & Chance, M. R. (2007). Proc. Natl Acad. Sci. USA, 104, 1552-1557.
23. Kiselar, J. G., Maleknia, S. D., Sullivan, M., Downard, K. M. & Chance, M. R. (2002). Int. J. Radiat. Biol. 78, 101-114.
24. Maleknia, S. D., Brenowitz, M. & Chance, M. R. (1999). Anal. Chem. 71, 3965-3973.
25. Nguyenle, T., Laurberg, M., Brenowitz, M. & Noller, H. F. (2006). J. Mol. Biol. 359, 1235-1248.
26. Ralston, C. Y., Sclavi, B., Sullivan, M., Deras, M. L., Woodson, S. A., Chance, M. R. & Brenowitz, M. (2000). Methods Enzymol. 317, 353-368.
27. Sclavi, B., Sullivan, M., Chance, M. R., Brenowitz, M. & Woodson, S. A. (1998a). Science, 279, 1940-1943.
28. Sclavi, B., Woodson, S., Sullivan, M., Chance, M. R. & Brenowitz, M. (1997). J. Mol. Biol. 266, 144-159.
29. Sclavi, B., Woodson, S., Sullivan, M., Chance, M. & Brenowitz, M. (1998b). Methods Enzymol. 295, 379-402.
30. Shcherbakova, I., Gupta, S., Chance, M. R. & Brenowitz, M. (2004). J. Mol. Biol. 342, 1431-1442.
31. Shi, W., Bohon, J., Han, D. P., Habte, H., Qin, Y., Cho, M. W. & Chance, M. R. (2010). J. Biol. Chem. 285, 24290-24298.
32. Sullivan, M. R., Rekhi, S., Bohon, J., Gupta, S., Abel, D., Toomey, J. & Chance, M. R. (2008). Rev. Sci. Instrum. 79, 025101.
33. Takamoto, K. & Chance, M. R. (2006). Annu. Rev. Biophys. Biomol. Struct. 35, 251-276.
34. Takamoto, K., Kamal, J. K. & Chance, M. R. (2007). Structure, 15, 39-51.
35. Uchida, T., Takamoto, K., He, Q., Chance, M. R. & Brenowitz, M. (2003). J. Mol. Biol. 328, 463-478.
36. Xu, G. & Chance, M. R. (2007). Chem. Rev. 107, 3514-3543.