Ultrasensitive electrochemical DNA sensor based on the target induced structural switching and surface-initiated enzymatic polymerization

Biosensors and Bioelectronics

Volumn 55, Issue , 2014, Pages 231-236

  Wan, Ying ^a   wang, Pengjuan ^a   Su, Yan ^a   Zhu, Xinhua ^a   Yang, Shulin ^a   Lu, Jianxin ^b   Gao, Jimin ^b   Fan, Chunhai ^c   Huang, Qing ^c  

^a NANJING UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^b BEIJING UNIVERSITY OF POSTS AND TELECOMMUNICATIONS   (China)

^c SHANGHAI INSTITUTE OF APPLIED PHYSICS   (China)

Author keywords

Electrochemical DNA sensor; Stem loop probe (SLP); Surface initiated enzymatic polymerization (SIEP); TdT mediated extension reaction; Terminal deoxynucleotidyl transferase (TdT)

Indexed keywords

DETECTION PERFORMANCE; ELECTROCHEMICAL DNA SENSOR; ELECTROCHEMICAL SIGNALS; ENZYMATIC POLYMERIZATION; SINGLE-STRANDED DNA; STEM-LOOP; STEM-LOOP STRUCTURES; TDT-MEDIATED EXTENSION REACTION;

COENZYMES; DNA; POLYMERIZATION; PROBES; SIGNAL DETECTION;

SENSORS;

2' DEOXYADENOSINE 5' TRIPHOSPHATE; AVIDIN; DNA; DNA NUCLEOTIDYLEXOTRANSFERASE; HORSERADISH PEROXIDASE; PHOSPHATE; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; BINDING SITE; BIOSENSOR; BIOTINYLATION; CONTROLLED STUDY; DNA CONFORMATION; DNA PROBE; DOUBLE STRANDED DNA BREAK; ELECTROCHEMICAL ANALYSIS; ENZYME BINDING; ENZYME MODIFICATION; ENZYME SPECIFICITY; GENE TARGETING; INTERMETHOD COMPARISON; LIMIT OF DETECTION; POLYMERIZATION; PROCESS DEVELOPMENT; SENSITIVITY ANALYSIS; SINGLE STRANDED DNA BREAK; STEM LOOP PROBE; STRUCTURE ANALYSIS; SURFACE INITIATED ENZYMATIC POLYMERIZATION; SURFACE PROPERTY;

ELECTROCHEMICAL DNA SENSOR; STEM-LOOP PROBE (SLP); SURFACE INITIATED ENZYMATIC POLYMERIZATION (SIEP); TDT-MEDIATED EXTENSION REACTION; TERMINAL DEOXYNUCLEOTIDYL TRANSFERASE (TDT);

BIOSENSING TECHNIQUES; CONDUCTOMETRY; DNA; DNA NUCLEOTIDYLEXOTRANSFERASE; ENZYME ACTIVATION; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SURFACE PROPERTIES;

EID: 84891447189     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2013.11.077     Document Type: Article

References (40)

1. Cosnier S., Mailley P. Analyst 2008, 133(8):984-991.
2. D'Orazio P. Clin. Chim. Acta 2003, 334(1):41-69.
3. Demidov V.V. Expert Rev. Mol. Diagn. 2002, 2(6):542-548.
4. Detter J.C., Jett J.M., Lucas S.M., Dalin E., Arellano A.R., Wang M., Nelson J.R., Chapman J., Lou Y., Rokhsar D. Genomics 2002, 80(6):691-698.
5. Erlich H.A., Gelfand D., Sninsky J.J. Science 1991, 252(5013):1643-1651.
6. Fan C., Plaxco K.W., Heeger A.J. Proc. Natl. Acad. Sci. U. S. A. 2003, 100(16):9134.
7. He Y., Zeng K., Zhang S., Gurung A.S., Baloda M., Zhang X., Liu G. Biosens. Bioelectron. 2012, 31(1):310-315.
8. He Y., Zeng K., Zhang X., Gurung A.S., Baloda M., Xu H., Liu G. Electrochem. Commun. 2010, 12(7):985-988.
9. Hellyer T.J., Nadeau J.G. Expert Rev. Mol. Diagn. 2004, 4(2):251-261.
10. Hsieh K., Xiao Y., Tom Soh H. Langmuir 2010, 26(12):10392-10396.
11. Huang Y., Zhu J., Li G., Chen Z., Jiang J.-H., Shen G.-L., Yu R.-Q. Biosens. Bioelectron. 2012, 42(1):526-531.
12. Kisaki O., Kato S., Shinohara K., Hiura H., Samori T., Sato H. J. Clin. Lab. Anal. 2010, 24(2):85-91.
13. Lao R., Song S., Wu H., Wang L., Zhang Z., He L., Fan C. Anal. Chem. 2005, 77(19):6475-6480.
14. Li D., Song S., Fan C. Acc. Chem. Res. 2010, 43(5):631-641.
15. Li H., Sun Z., Zhong W., Hao N., Xu D., Chen H.Y. Anal. Chem. 2010, 82(13):5477-5483.
16. Liu G., Wan Y., Gau V., Zhang J., Wang L., Song S., Fan C. J. Am. Chem. Soc. 2008, 130(21):6820-6825.
17. Lubin A.A., Lai R.Y., Baker B.R., Heeger A.J., Plaxco K.W. Anal. Chem. 2006, 78(16):5671-5677.
18. Lucarelli F., Tombelli S., Minunni M., Marrazza G., Mascini M. Anal. Chim. Acta 2008, 609(2):139-159.
19. Luo C., Tang H., Cheng W., Yan L., Zhang D., Ju H., Ding S. Biosens. Bioelectron. 2013, 48(1):132-137.
20. MacKnight K.T. Santa Clara Comput. High Technol. Law J. 2003, 20:95.
21. Mahmoudian L., Kaji N., Tokeshi M., Nilsson M., Baba Y. Anal. Chem. 2008, 80(7):2483-2490.
22. Murakami T., Sumaoka J., Komiyama M. Nucleic Acids Res. 2009, 37(3):e19.
23. Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N., Hase T. Nucleic Acids Res. 2000, 28(12):e63.
24. Østergaard M.E., Southwell A.L., Kordasiewicz H., Watt A.T., Skotte N.H., Doty C.N., Vaid K., Villanueva E.B., Swayze E.E., Bennett C.F. Nucleic Acids Res. 2013, 41(21):9634-9650.
25. Parida M., Sannarangaiah S., Dash P.K., Rao P., Morita K. Rev. Med. Virol. 2008, 18(6):407-421.
26. Pei H., Lu N., Wen Y., Song S., Liu Y., Yan H., Fan C. Adv. Mater. 2010, 22(42):4754-4758.
27. Sun W., Qin P., Gao H., Li G., Jiao K. Biosens. Bioelectron. 2010, 25(6):1264-1270.
28. Teles F., Fonseca L. Talanta 2008, 77(2):606-623.
29. Tjong V., Yu H., Hucknall A., Rangarajan S., Chilkoti A. Anal. Chem. 2011, 83(13):5153-5159.
30. Wan Y., Lao R., Liu G., Song S., Wang L., Li D., Fan C. J. Phys. Chem. B 2010, 114(19):6703-6706.
31. Wan Y., Xu H., Su Y., Zhu X., Song S., Fan C. Biosens. Bioelectron. 2013, 41:526-531.
32. Wan Y., Zhang J., Liu G., Pan D., Wang L., Song S., Fan C. Biosens. Bioelectron. 2009, 24(5):1209-1212.
33. Wang J. Perspect. Bioanal. 2005, 1:175-194.
34. Xiao Y., Lou X., Uzawa T., Plakos K.J., Plaxco K.W., Soh H.T. J. Am. Chem. Soc. 2009, 131(42):15311-15316.
35. Yang W., Lai R.Y. Langmuir 2011, 27(23):14669-14677.
36. Yu Z.-g., Lai R.Y. Chem. Commun. 2012, 48(85):10523-10525.
37. Zhang J., Lao R., Song S., Yan Z., Fan C. Anal. Chem. 2008, 80(23):9029-9033.
38. Zhang J., Song S., Wang L., Pan D., Fan C. Nat. Protoc. 2007, 2(11):2888-2895.
39. Zhang J., Song S., Zhang L., Wang L., Wu H., Pan D., Fan C. J. Am. Chem. Soc. 2006, 128(26):8575-8580.
40. Zhang Y., Tang Z., Wang J., Wu H., Maham A., Lin Y. Anal. Chem. 2010, 82(15):6440-6446.