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Volumn 24, Issue 2, 2010, Pages 85-91

High-throughput single-base mismatch detection for genotyping of UDP-glucuronosyltransferase (UGT1A1) with probe capture assay coupled with modified allele-specific primer extension reaction (MASPER)

Author keywords

Allele specific primer; Plate hybridization; Single base mutation; UGT1A1

Indexed keywords

GENOMIC DNA; GLUCURONOSYLTRANSFERASE 1A1; HORSERADISH PEROXIDASE; PRIMER DNA; STREPTAVIDIN;

EID: 77951532118     PISSN: 08878013     EISSN: 10982825     Source Type: Journal    
DOI: 10.1002/jcla.20359     Document Type: Article
Times cited : (6)

References (32)
  • 1
    • 0030861903 scopus 로고    scopus 로고
    • The use of a genetic map of biallelic markers in linkage studies
    • DOI 10.1038/ng0997-21
    • Kruglyak L. The use of a genetic map of biallelic markers in linkage studies. Nat Genet 1997;17:21-24. (Pubitemid 27377527)
    • (1997) Nature Genetics , vol.17 , Issue.1 , pp. 21-24
    • Kruglyak, L.1
  • 2
    • 0031690079 scopus 로고    scopus 로고
    • Single nucleotide polymorphism hunting in cyberspace
    • DOI 10.1002/(SICI)1098-1004(1998)12:4<221::AID-HUMU1>3.0.CO;2-I
    • Gu Z, Hillier L, Kwok PY. Single nucleotide polymorphism hunting in cyberspace. Hum Mutat 1998;12:221-225. (Pubitemid 28418890)
    • (1998) Human Mutation , vol.12 , Issue.4 , pp. 221-225
    • Gu, Z.1    Hillier, L.2    Kwok, P.-Y.3
  • 3
    • 0032748555 scopus 로고    scopus 로고
    • Pharmacogenetics and pharmacogenomics: Why is this relevant to the clinical geneticist?
    • Nebert DW. Pharmacogenetics and pharmacogenomics: Why is this relevant to the clinical geneticist? Clin Genet 1999;56:247-258.
    • (1999) Clin Genet , vol.56 , pp. 247-258
    • Nebert, D.W.1
  • 4
    • 0034022213 scopus 로고    scopus 로고
    • The use of single-nucleotide polymorphism maps in pharmacogenomics
    • DOI 10.1038/75360
    • McCarthy JJ, Hilfiker R. The use of single-nucleotide polymorphism maps in pharmacogenomics. Nat Biotechnol 2000;18:505-508. (Pubitemid 30313953)
    • (2000) Nature Biotechnology , vol.18 , Issue.5 , pp. 505-508
    • McCarthy, J.J.1    Hilfiker, R.2
  • 5
    • 0034093134 scopus 로고    scopus 로고
    • Electrophoretic detection of single-nucleotide polymorphisms
    • See D, Kanazin V, Talbert H, Blake T. Electrophoretic detection of single-nucleotide polymorphisms. Biotechniques 2000;28:710-714.
    • (2000) Biotechniques , vol.28 , pp. 710-714
    • See, D.1    Kanazin, V.2    Talbert, H.3    Blake, T.4
  • 6
    • 0031983834 scopus 로고    scopus 로고
    • Multicolor molecular beacons for allele discrimination
    • DOI 10.1038/nbt0198-49
    • Tyagi S, Bratu DP, Kramer FR. Multicolor molecular beacons for allele discrimination. Nat Biotechnol 1998;16:49-53. (Pubitemid 28035948)
    • (1998) Nature Biotechnology , vol.16 , Issue.1 , pp. 49-53
    • Tyagi, S.1    Bratu, D.P.2    Kramer, F.R.3
  • 7
    • 0345129990 scopus 로고    scopus 로고
    • Multiplex detection of single-nucleotide variations using molecular beacons
    • DOI 10.1016/S1050-3862(98)00018-7, PII S1050386298000187
    • Marras SA, Kramer FR, Tyagi S. Multiplex detection of single-nucleotide variations using molecular beacons. Genet Anal 1999;14:151-156. (Pubitemid 29095372)
    • (1999) Genetic Analysis - Biomolecular Engineering , vol.14 , Issue.5-6 , pp. 151-156
    • Marras, S.A.E.1    Russell Kramer, F.2    Tyagi, S.3
  • 8
    • 0024605518 scopus 로고
    • Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS)
    • Newton CR, Graham A, Heptinstall LE, et al. Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS). Nucleic Acids Res 1989;17:2503-2516.
    • (1989) Nucleic Acids Res , vol.17 , pp. 2503-2516
    • Newton, C.R.1    Graham, A.2    Heptinstall, L.E.3
  • 10
    • 0025986943 scopus 로고
    • Minisatellite repeat coding as a digital approach to DNA typing
    • Jeffreys AJ, MacLeod A, Tamaki K, Neil DL, Monckton DG. Minisatellite repeat coding as a digital approach to DNA typing. Nature 1991;354:204-209. (Pubitemid 21896812)
    • (1991) Nature , vol.354 , Issue.6350 , pp. 204-209
    • Jeffreys, A.J.1    MacLeod, A.2    Tamaki, K.3    Neil, D.L.4    Monckton, D.G.5
  • 12
    • 0032903821 scopus 로고    scopus 로고
    • Dynamic allelespecific hybridization. A new method for scoring single nucleotide polymorphisms
    • Howell WM, Jobs M, Gyllensten U, Brookes AJ. Dynamic allelespecific hybridization. A new method for scoring single nucleotide polymorphisms. Nat Biotechnol 1999;17:87-88.
    • (1999) Nat Biotechnol , vol.17 , pp. 87-88
    • Howell, W.M.1    Jobs, M.2    Gyllensten, U.3    Brookes, A.J.4
  • 13
    • 0031568277 scopus 로고    scopus 로고
    • Detection of single-base changes using a bioluminometric primer extension assay
    • DOI 10.1006/abio.1996.9913
    • Nyren P, Karamohamed S, Ronaghi M. Detection of single-base changes using a bioluminometric primer extension assay. Anal Biochem 1997;244:367-373. (Pubitemid 27043334)
    • (1997) Analytical Biochemistry , vol.244 , Issue.2 , pp. 367-373
    • Nyren, P.1    Karamohamed, S.2    Ronaghi, M.3
  • 14
    • 0034630451 scopus 로고    scopus 로고
    • Single-nucleotide polymorphism analysis by pyrosequencing
    • Ahmadian A, Gharizadeh B, Gustafsson AC, et al. Single-nucleotide polymorphism analysis by pyrosequencing. Anal Biochem 2000;280:103-110.
    • (2000) Anal Biochem , vol.280 , pp. 103-110
    • Ahmadian, A.1    Gharizadeh, B.2    Gustafsson, A.C.3
  • 16
    • 0030791025 scopus 로고    scopus 로고
    • Methods for detection of point mutations: Performance and quality assessment
    • IFCC Scientific Division, Committee on Molecular Biology Techniques
    • Nollau P, Wagener C. Methods for detection of point mutations: Performance and quality assessment. IFCC Scientific Division, Committee on Molecular Biology Techniques. Clin Chem 1997;43:1114-1128.
    • (1997) Clin Chem , vol.43 , pp. 1114-1128
    • Nollau, P.1    Wagener, C.2
  • 17
    • 0038217407 scopus 로고    scopus 로고
    • From gels to chips: "Minisequencing" primer extension for analysis of point mutations and single nucleotide polymorphisms
    • Syvanen AC. From gels to chips: "Minisequencing" primer extension for analysis of point mutations and single nucleotide polymorphisms. Hum Mutat 1999;13:1-10.
    • (1999) Hum Mutat , vol.13 , pp. 1-10
    • Syvanen, A.C.1
  • 18
    • 0035487816 scopus 로고    scopus 로고
    • Quantitative detection of single nucleotide polymorphisms for a pooled sample by a bioluminometric assay coupled with modified primer extension reactions (BAMPER)
    • Zhou G, Kamahori M, Okano K, Chuan G, Harada K, Kambara H. Quantitative detection of single nucleotide polymorphisms for a pooled sample by a bioluminometric assay coupled with modified primer extension reactions (BAMPER). Nucleic Acids Res 2001;29:E93.
    • (2001) Nucleic Acids Res , vol.29
    • Zhou, G.1    Kamahori, M.2    Okano, K.3    Chuan, G.4    Harada, K.5    Kambara, H.6
  • 19
    • 0035154453 scopus 로고    scopus 로고
    • High-throughput SNP genotyping by allele-specific PCR with universal energy-transfer-labeled primers
    • DOI 10.1101/gr.157901
    • Myakishev MV, Khripin Y, Hu S, Hamer DH. High-throughput SNP genotyping by allele-specific PCR with universal energy-transfer-labeled primers. Genome Res 2001;11:163-169. (Pubitemid 32117962)
    • (2001) Genome Research , vol.11 , Issue.1 , pp. 163-169
    • Myakishev, M.V.1    Khripin, Y.2    Hu, S.3    Hamer, D.H.4
  • 20
    • 0027991904 scopus 로고
    • Investigation of the substrate specificity of a cloned expressed human bilirubin UDP-glucuronosyltransferase: UDP-sugar specificity and involvement in steroid and xenobiotic glucuronidation
    • Senafi SB, Clarke DJ, Burchell B. Investigation of the substrate specificity of a cloned expressed human bilirubin UDP-glucurono-syltransferase: UDP-sugar specificity and involvement in steroid and xenobiotic glucuronidation. Biochem J 1994;303:233-240. (Pubitemid 24302924)
    • (1994) Biochemical Journal , vol.303 , Issue.1 , pp. 233-240
    • Senafi, S.B.1    Clarke, D.J.2    Burchell, B.3
  • 21
    • 0032519431 scopus 로고    scopus 로고
    • Genetic predisposition to the metabolism of irinotecan (CPT-11): Role of uridine diphosphate glucuronosyltransferase isoform 1A1 in the glucuronidation of its active metabolite (SN-38) in human liver microsomes
    • Iyer L, King CD, Whitington PF, et al. Genetic predisposition to the metabolism of irinotecan (CPT-11). Role of uridine diphosphate glucuronosyltransferase isoform 1A1 in the glucuronidation of its active metabolite (SN-38) in human liver microsomes. J Clin Invest 1998;101:847-854. (Pubitemid 28096082)
    • (1998) Journal of Clinical Investigation , vol.101 , Issue.4 , pp. 847-854
    • Iyer, L.1    King, C.D.2    Whitington, P.F.3    Green, M.D.4    Roy, S.K.5    Tephly, T.R.6    Coffman, B.L.7    Ratain, M.J.8
  • 25
    • 0026879233 scopus 로고
    • The novel bilirubin/phenol UDP-glucuronosyltransferase UGT1 gene locus: Implications for multiple nonhemolytic familial hyperbilirubinemia phenotypes
    • Owens IS, Ritter JK. The novel bilirubin/phenol UDP- glucuronosyltransferase UGT1 gene locus: Implications for multiple nonhemolytic familial hyperbilirubinemia phenotypes. Pharmacogenetics 1992;2:93-108.
    • (1992) Pharmacogenetics , vol.2 , pp. 93-108
    • Owens, I.S.1    Ritter, J.K.2
  • 28
    • 0031864410 scopus 로고    scopus 로고
    • Contribution of two missense mutations (G71R and Y486D) of the bilirubin UDP glycosyltransferase (UGT1A1) gene to phenotypes of Gilbert's syndrome and Crigler-Najjar syndrome type II
    • DOI 10.1016/S0925-4439(98)00013-1, PII S0925443998000131
    • Yamamoto K, Sato H, Fujiyama Y, Doida Y, Bamba T. Contribution of two missense mutations (G71R and Y486D) of the bilirubin UDP-glycosyltransferase (UGT1A1) gene to phenotypes of Gilbert's syndrome and Crigler-Najjar syndrome type II. Biochem Biophys Acta 1998;406:267-273. (Pubitemid 28269309)
    • (1998) Biochimica et Biophysica Acta - Molecular Basis of Disease , vol.1406 , Issue.3 , pp. 267-273
    • Yamamoto, K.1    Sato, H.2    Fujiyama, Y.3    Doida, Y.4    Bamba, T.5
  • 29
    • 0033001454 scopus 로고    scopus 로고
    • Association of neonatal hyperbilirubinemia with bilirubin UDP- Glucuronosyltransferase polymorphism
    • DOI 10.1542/peds.103.6.1224
    • Maruo Y, Nishizawa K, Sato H, Doida Y, Shimada M. Association of neonatal hyperbilirubinemia with bilirubin UDP-glucuronosyltransferase polymorphism. Pediatrics 1999;103:1224-1227. (Pubitemid 29258797)
    • (1999) Pediatrics , vol.103 , Issue.6 I , pp. 1224-1227
    • Maruo, Y.1    Nishizawa, K.2    Sato, H.3    Doida, Y.4    Shimada, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.