-
1
-
-
0012662441
-
A Bacterial Blight of Chrysanthemums
-
Burkholder, W.; McFadden, L.; Dimock, A. A Bacterial Blight of Chrysanthemums. Phytopathology 1953, 43, 522-526.
-
(1953)
Phytopathology
, vol.43
, pp. 522-526
-
-
Burkholder, W.1
McFadden, L.2
Dimock, A.3
-
2
-
-
22544472186
-
Transfer of Pectobacterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiaca to the Genus Dickeya Gen. Nov as Dickeya chrysanthemi Comb. Nov and Dickeya paradisiaca Comb. Nov and Delineation of Four Novel Species, Dickeya dadantii sp Nov., Dickeya dianthicola Sp Nov., Dickeya dieffenbachiae Sp Nov and Dickeya zeae Sp Nov
-
Samson, R.; Legendre, J.; Christen, R.; Fischer-Le Saux, M.; Achouak, W.; Gardan, L. Transfer of Pectobacterium chrysanthemi (Burkholder et al. 1953) Brenner et al. 1973 and Brenneria paradisiaca to the Genus Dickeya Gen. Nov as Dickeya chrysanthemi Comb. Nov and Dickeya paradisiaca Comb. Nov and Delineation of Four Novel Species, Dickeya dadantii sp Nov., Dickeya dianthicola Sp Nov., Dickeya dieffenbachiae Sp Nov and Dickeya zeae Sp Nov. Int. J. Syst. Evol. Microbiol. 2005, 55, 1415-1427.
-
(2005)
Int. J. Syst. Evol. Microbiol.
, vol.55
, pp. 1415-1427
-
-
Samson, R.1
Legendre, J.2
Christen, R.3
Fischer-Le Saux, M.4
Achouak, W.5
Gardan, L.6
-
3
-
-
34548858741
-
Host Range and Molecular Phylogenies of the Soft Rot Enterobacterial Genera Pectobacterium and Dickeya
-
Ma, B.; Hibbing, M.E.; Kim, H.; Reedy, R.M.; Yedidia, I.; Breuer, J.; Breuer, J.; Glasner, J.D.; Perna, N.T.; Kelman, A.; et al. Host Range and Molecular Phylogenies of the Soft Rot Enterobacterial Genera Pectobacterium and Dickeya. Phytopathology 2007, 97, 1150-1163.
-
(2007)
Phytopathology
, vol.97
, pp. 1150-1163
-
-
Ma, B.1
Hibbing, M.E.2
Kim, H.3
Reedy, R.M.4
Yedidia, I.5
Breuer, J.6
Breuer, J.7
Glasner, J.D.8
Perna, N.T.9
Kelman, A.10
-
4
-
-
0036181156
-
Potato Diseases Caused by Soft Rot Erwinias: An Overview of Pathogenesis
-
Perombelon, M. Potato Diseases Caused by Soft Rot Erwinias: An Overview of Pathogenesis. Plant Pathol. 2002, 51, 1-12.
-
(2002)
Plant Pathol
, vol.51
, pp. 1-12
-
-
Perombelon, M.1
-
5
-
-
51049119850
-
Characterization of Dickeya Strains Isolated from Potato and River Water Samples in Finland
-
Laurila, J.; Ahola, V.; Lehtinen, A.; Joutsjoki, T.; Hannukkala, A.; Rahkonen, A.; Pirhonen, M. Characterization of Dickeya Strains Isolated from Potato and River Water Samples in Finland. Eur. J. Plant Pathol. 2008, 122, 213-225.
-
(2008)
Eur. J. Plant Pathol.
, vol.122
, pp. 213-225
-
-
Laurila, J.1
Ahola, V.2
Lehtinen, A.3
Joutsjoki, T.4
Hannukkala, A.5
Rahkonen, A.6
Pirhonen, M.7
-
6
-
-
70449530716
-
Biochemical and Genetical Analysis Reveal a New Clade of Biovar 3 Dickeya Spp. Strains Isolated from Potato in Europe
-
Slawiak, M.; van Beckhoven, J.R.C.M.; Speksnijder, A.G.C.L.; Czajkowski, R.; Grabe, G.; van der Wolf, J.M. Biochemical and Genetical Analysis Reveal a New Clade of Biovar 3 Dickeya Spp. Strains Isolated from Potato in Europe. Eur. J. Plant Pathol. 2009, 125, 245-261.
-
(2009)
Eur. J. Plant Pathol.
, vol.125
, pp. 245-261
-
-
Slawiak, M.1
van Beckhoven, J.R.C.M.2
Speksnijder, A.G.C.L.3
Czajkowski, R.4
Grabe, G.5
van der Wolf, J.M.6
-
7
-
-
59549099280
-
Assessment of Recent Outbreaks of Dickeya Sp (Syn. Erwinia chrysanthemi) Slow Wilt in Potato Crops in Israel
-
Tsror Lahkim, L.; Erlich, O.; Lebiush, S.; Hazanovsky, M.; Zig, U.; Slawiak, M.; Grabe, G.; van der Wolf, J.M.; van de Haar, J.J. Assessment of Recent Outbreaks of Dickeya Sp (Syn. Erwinia chrysanthemi) Slow Wilt in Potato Crops in Israel. Eur. J. Plant Pathol. 2009, 123, 311-320.
-
(2009)
Eur. J. Plant Pathol.
, vol.123
, pp. 311-320
-
-
Tsror Lahkim, L.1
Erlich, O.2
Lebiush, S.3
Hazanovsky, M.4
Zig, U.5
Slawiak, M.6
Grabe, G.7
van der Wolf, J.M.8
van de Haar, J.J.9
-
8
-
-
84876789262
-
First Report of Potato Blackleg Caused by a Biovar 3 Dickeya Sp. in Georgia
-
doi:10.5197/j.2044-0588.2011.023.001
-
Tsror Lahkim, L.; Erlich, O.; Lebiush, S.; van der Wolf, J.; Czajkowski, R.; Mozes, G.; Sikharulidze, Z.; Ben Daniel, B. First Report of Potato Blackleg Caused by a Biovar 3 Dickeya Sp. in Georgia. New Disease Reports 2011, doi:10.5197/j.2044-0588.2011.023.001.
-
(2011)
New Disease Reports
-
-
Tsror Lahkim, L.1
Erlich, O.2
Lebiush, S.3
van der Wolf, J.4
Czajkowski, R.5
Mozes, G.6
Sikharulidze, Z.7
Ben Daniel, B.8
-
9
-
-
84896884976
-
Dickeya solani Sp. Nov., a Pectinolytic Plant Pathogenic Bacterium Isolated from Potato (Solanum tuberosum)
-
doi: 10.1099/ijs.0.052944-0
-
Van der Wolf, J.M.; Nijhuis, E.H.; Kowalewska, M.J.; Saddler, G.S.; Parkinson, N.; Elphinstone, J.G.; Pritchard, L.; Toth, I.K.; Lojkowska, E.; Potrykus, M.; et al. Dickeya solani Sp. Nov., a Pectinolytic Plant Pathogenic Bacterium Isolated from Potato (Solanum tuberosum). Int. J. Syst. Evol. Microbiol. 2013, doi: 10.1099/ijs.0.052944-0.
-
(2013)
Int. J. Syst. Evol. Microbiol.
-
-
Van der Wolf, J.M.1
Nijhuis, E.H.2
Kowalewska, M.J.3
Saddler, G.S.4
Parkinson, N.5
Elphinstone, J.G.6
Pritchard, L.7
Toth, I.K.8
Lojkowska, E.9
Potrykus, M.10
-
10
-
-
79955538276
-
Dickeya Species: An Emerging Problem for Potato Production in Europe
-
Toth, I.K.; van der Wolf, J.M.; Saddler, G.; Lojkowska, E.; Helias, V.; Pirhonen, M.; Tsror, L.; Elphinstone, J.G. Dickeya Species: An Emerging Problem for Potato Production in Europe. Plant Pathol. 2011, 60, 385-399.
-
(2011)
Plant Pathol
, vol.60
, pp. 385-399
-
-
Toth, I.K.1
van der Wolf, J.M.2
Saddler, G.3
Lojkowska, E.4
Helias, V.5
Pirhonen, M.6
Tsror, L.7
Elphinstone, J.G.8
-
11
-
-
75949115743
-
Systemic Colonization of Potato Plants by a Soilborne Green Fluorescent Protein-Tagged Strain of Dickeya Sp Biovar 3
-
Czajkowski, R.; de Boer, W.J.; Velvis, H.; van der Wolf, J.M. Systemic Colonization of Potato Plants by a Soilborne, Green Fluorescent Protein-Tagged Strain of Dickeya Sp Biovar 3. Phytopathology 2010, 100, 134-142.
-
(2010)
Phytopathology
, vol.100
, pp. 134-142
-
-
Czajkowski, R.1
de Boer, W.J.2
Velvis, H.3
van der Wolf, J.M.4
-
12
-
-
84876799730
-
Virulence of 'Dickeya solani' and Dickeya dianthicola Biovar-1 and -7 Strains on Potato (Solanum tuberosum)
-
Czajkowski, R.; de Boer, W.J.; van der Zouwen, P.S.; Kastelein, P.; Jafra, S.; de Haan, E.G.; van den Bovenkamp, G.W.; van der Wolf, J.M. Virulence of 'Dickeya solani' and Dickeya dianthicola Biovar-1 and -7 Strains on Potato (Solanum tuberosum). Plant Pathol. 2012, 62, 597-610.
-
(2012)
Plant Pathol
, vol.62
, pp. 597-610
-
-
Czajkowski, R.1
de Boer, W.J.2
van der Zouwen, P.S.3
Kastelein, P.4
Jafra, S.5
de Haan, E.G.6
van den Bovenkamp, G.W.7
van der Wolf, J.M.8
-
13
-
-
84870811273
-
Revised Phylogeny and Novel Horizontally Acquired Virulence Determinants of the Model Soft Rot Phytopathogen Pectobacterium wasabiae SCC3193
-
Nykyri, J.; Niemi, O.; Koskinen, P.; Nokso-Koivisto, J.; Pasanen, M.; Broberg, M.; Plyusnin, I.; Törönen, P.; Holm, L.; Pirhonen, M.; et al. Revised Phylogeny and Novel Horizontally Acquired Virulence Determinants of the Model Soft Rot Phytopathogen Pectobacterium wasabiae SCC3193. PLoS Pathogens 2012, 8, e1003013.
-
(2012)
PLoS Pathogens
, vol.8
-
-
Nykyri, J.1
Niemi, O.2
Koskinen, P.3
Nokso-Koivisto, J.4
Pasanen, M.5
Broberg, M.6
Plyusnin, I.7
Törönen, P.8
Holm, L.9
Pirhonen, M.10
-
14
-
-
24044455869
-
Genome Sequencing in Microfabricated High-Density Picolitre Reactors
-
Margulies, M.; Egholm, M.; Altman, W.; Attiya, S.; Bader, J.; Bemben, L.; Berka, J.; Braverman, M.; Chen, Y.; Chen, Z.; et al. Genome Sequencing in Microfabricated High-Density Picolitre Reactors. Nature 2005, 437, 376-380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.3
Attiya, S.4
Bader, J.5
Bemben, L.6
Berka, J.7
Braverman, M.8
Chen, Y.9
Chen, Z.10
-
15
-
-
0033990060
-
The Staden Package 1998
-
Staden, R.; Beal, K.F.; Bonfield, J.K. The Staden Package, 1998. Methods Mol. Bio. 2000, 132, 115.
-
(2000)
Methods Mol. Bio.
, vol.132
, pp. 115
-
-
Staden, R.1
Beal, K.F.2
Bonfield, J.K.3
-
16
-
-
77952299957
-
Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification
-
Hyatt, D.; Chen, G.; LoCascio, P.F.; Land, M.L.; Larimer, F.W.; Hauser, L.J. Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification. BMC Bioinformatics 2010, 11, 119.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 119
-
-
Hyatt, D.1
Chen, G.2
LoCascio, P.F.3
Land, M.L.4
Larimer, F.W.5
Hauser, L.J.6
-
17
-
-
77953023066
-
Geneprimp: A Gene Prediction Improvement Pipeline for Prokaryotic Genomes
-
Pati, A.; Ivanova, N.N.; Mikhailova, N.; Ovchinnikova, G.; Hooper, S.D.; Lykidis, A.; Kyrpides, N.C. GenePRIMP: A Gene Prediction Improvement Pipeline for Prokaryotic Genomes. Nat. Methods 2010, 7, 455-462.
-
(2010)
Nat. Methods
, vol.7
, pp. 455-462
-
-
Pati, A.1
Ivanova, N.N.2
Mikhailova, N.3
Ovchinnikova, G.4
Hooper, S.D.5
Lykidis, A.6
Kyrpides, N.C.7
-
18
-
-
84874663959
-
A Large-Scale Evaluation of Computational Protein Function Prediction
-
Radivojac, P.; Clark, W.T.; Oron, T.R.; Schnoes, A.M.; Wittkop, T.; Sokolov, A.; Graim, K.; Funk, C.; Verspoor, K.; Ben-Hur, A.; et al. A Large-Scale Evaluation of Computational Protein Function Prediction. Nat. Methods 2013, 10 (suppl.), 221-227.
-
(2013)
Nat. Methods
, vol.10
, Issue.SUPPL.
, pp. 221-227
-
-
Radivojac, P.1
Clark, W.T.2
Oron, T.R.3
Schnoes, A.M.4
Wittkop, T.5
Sokolov, A.6
Graim, K.7
Funk, C.8
Verspoor, K.9
Ben-Hur, A.10
-
19
-
-
0033956060
-
The COG Database: A Tool for Genome-Scale Analysis of Protein Functions and Evolution
-
Tatusov, R.; Galperin, M.; Natale, D.; Koonin, E. The COG Database: A Tool for Genome-Scale Analysis of Protein Functions and Evolution. Nucleic Acids Res. 2000, 28, 33-36.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 33-36
-
-
Tatusov, R.1
Galperin, M.2
Natale, D.3
Koonin, E.4
-
20
-
-
34250665888
-
RNAmmer: Consistent and Rapid Annotation of Ribosomal RNA Genes
-
Lagesen, K.; Hallin, P.; Rodland, E.A.; Staerfeldt, H.; Rognes, T.; Ussery, D.W. RNAmmer: Consistent and Rapid Annotation of Ribosomal RNA Genes. Nucleic Acids Res. 2007, 35, 3100-3108.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3100-3108
-
-
Lagesen, K.1
Hallin, P.2
Rodland, E.A.3
Staerfeldt, H.4
Rognes, T.5
Ussery, D.W.6
-
21
-
-
73149098333
-
Shifting the Genomic Gold Standard for the Prokaryotic Species Definition
-
Richter, M.; Rossello-Mora, R. Shifting the Genomic Gold Standard for the Prokaryotic Species Definition. Proc. Natl. Acad. Sci. U. S. A. 2009, 106, 19126-19131.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 19126-19131
-
-
Richter, M.1
Rossello-Mora, R.2
-
22
-
-
77956193448
-
ProgressiveMauve: Multiple Genome Alignment with Gene Gain Loss and Rearrangement
-
Darling, A.E.; Mau, B.; Perna, N.T. ProgressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement. PLoS One 2010, 5, e11147.
-
(2010)
PLoS One
, vol.5
-
-
Darling, A.E.1
Mau, B.2
Perna, N.T.3
-
23
-
-
84876971177
-
Detection of Phytopathogens of the Genus Dickeya using a PCR Primer Prediction Pipeline for Draft Bacterial Genome Sequences
-
Pritchard, L.; Humphris, S.; Saddler, G.S.; Parkinson, N.M.; Bertrand, V.; Elphinstone, J.G.; Toth, I.K. Detection of Phytopathogens of the Genus Dickeya using a PCR Primer Prediction Pipeline for Draft Bacterial Genome Sequences. Plant Pathol. 2013, 62, 587-596.
-
(2013)
Plant Pathol
, vol.62
, pp. 587-596
-
-
Pritchard, L.1
Humphris, S.2
Saddler, G.S.3
Parkinson, N.M.4
Bertrand, V.5
Elphinstone, J.G.6
Toth, I.K.7
-
24
-
-
84890930391
-
-
BLAST (accessed on 8 March 2013)
-
BLAST. Available online: http://blast.ncbi.nlm.nih.gov/blast.cgi (accessed on 8 March 2013).
-
-
-
-
25
-
-
84890949422
-
-
InterProScan 4. (accessed on 8 March 2013)
-
InterProScan 4. Available online: http://www.ebi.ac.uk/tools/pfa/iprscan/(accessed on 8 March 2013).
-
-
-
-
26
-
-
0033179468
-
The Specificity-Conferring Code of Adenylation Domains in Nonribosomal Peptide Synthetases
-
Stachelhaus, T.; Mootz, H.; Marahiel, M. The Specificity-Conferring Code of Adenylation Domains in Nonribosomal Peptide Synthetases. Chem. Biol. 1999, 6, 493-505.
-
(1999)
Chem. Biol.
, vol.6
, pp. 493-505
-
-
Stachelhaus, T.1
Mootz, H.2
Marahiel, M.3
-
27
-
-
84890921142
-
-
PKS/NRPS Analysis Web-site. (accessed on 8 March 2013)
-
PKS/NRPS Analysis Web-site. Available online: http://nrps.igs.umaryland.edu/nrps (accessed on 8 March 2013).
-
-
-
-
28
-
-
64249084052
-
in Silico Prediction of Microbial Secondary Metabolic Pathways from DNA Sequence Data
-
Bachmann, B.O.; Ravel, J. in Silico Prediction of Microbial Secondary Metabolic Pathways from DNA Sequence Data. Methods Enzymol. 2009, 458, 181-217.
-
(2009)
Methods Enzymol
, vol.458
, pp. 181-217
-
-
Bachmann, B.O.1
Ravel, J.2
-
29
-
-
2442449227
-
Genomic Islands in Pathogenic and Environmental Microorganisms
-
Dobrindt, U.; Hochhut, B.; Hentschel, U.; Hacker, J. Genomic Islands in Pathogenic and Environmental Microorganisms. Nat. Rev. Microbiol. 2004, 2, 414-424.
-
(2004)
Nat. Rev. Microbiol.
, vol.2
, pp. 414-424
-
-
Dobrindt, U.1
Hochhut, B.2
Hentschel, U.3
Hacker, J.4
-
30
-
-
80054835780
-
A Multi-Repeat Adhesin of the Phytopathogen, Pectobacterium atrosepticum, is Secreted by a Type I Pathway and is Subject to Complex Regulation Involving a Non-Canonical Diguanylate Cyclase
-
Perez-Mendoza, D.; Coulthurst, S.J.; Humphris, S.; Campbell, E.; Welch, M.; Toth, I.K.; Salmond, G.P.C. A Multi-Repeat Adhesin of the Phytopathogen, Pectobacterium atrosepticum, is Secreted by a Type I Pathway and is Subject to Complex Regulation Involving a Non-Canonical Diguanylate Cyclase. Mol. Microbiol. 2011, 82, 719-733.
-
(2011)
Mol. Microbiol.
, vol.82
, pp. 719-733
-
-
Perez-Mendoza, D.1
Coulthurst, S.J.2
Humphris, S.3
Campbell, E.4
Welch, M.5
Toth, I.K.6
Salmond, G.P.C.7
-
31
-
-
78549266157
-
A Widespread Family of Polymorphic Contact-Dependent Toxin Delivery Systems in Bacteria
-
Aoki, S.K.; Diner, E.J.; de Roodenbeke, C.T.K.; Burgess, B.R.; Poole, S.J.; Braaten, B.A.; Jones, A.M.; Webb, J.S.; Hayes, C.S.; Cotter, P.A.; et al. A Widespread Family of Polymorphic Contact-Dependent Toxin Delivery Systems in Bacteria. Nature 2010, 468, 439-442.
-
(2010)
Nature
, vol.468
, pp. 439-442
-
-
Aoki, S.K.1
Diner, E.J.2
de Roodenbeke, C.T.K.3
Burgess, B.R.4
Poole, S.J.5
Braaten, B.A.6
Jones, A.M.7
Webb, J.S.8
Hayes, C.S.9
Cotter, P.A.10
-
32
-
-
0037040884
-
The Oligogalacturonate-Specific Porin KdgM of Erwinia chrysanthemi belongs to a New Porin Family
-
Blot, N.; Berrier, C.; Hugouvieux-Cotte-Pattat, N.; Ghazi, A.; Condemine, G. The Oligogalacturonate-Specific Porin KdgM of Erwinia chrysanthemi belongs to a New Porin Family. J. Biol. Chem. 2002, 277, 7936-7944.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 7936-7944
-
-
Blot, N.1
Berrier, C.2
Hugouvieux-Cotte-Pattat, N.3
Ghazi, A.4
Condemine, G.5
-
33
-
-
0023773845
-
Mapping and Regulation of the Cel Genes in Erwinia chrysanthemi
-
Aymeric, J.; Guiseppi, A.; Pascal, M.; Chippaux, M. Mapping and Regulation of the Cel Genes in Erwinia chrysanthemi. Mol. Gen. Genet. 1988, 211, 95-101.
-
(1988)
Mol. Gen. Genet.
, vol.211
, pp. 95-101
-
-
Aymeric, J.1
Guiseppi, A.2
Pascal, M.3
Chippaux, M.4
-
34
-
-
77953181794
-
ClpXP Protease Regulates the Type III Secretion System of Dickeya dadantii 3937 and is Essential for the Bacterial Virulence
-
Li, Y.; Yamazaki, A.; Zou, L.; Biddle, E.; Zeng, Q.; Wang, Y.; Lin, H.; Wang, Q.; Yang, C. ClpXP Protease Regulates the Type III Secretion System of Dickeya dadantii 3937 and is Essential for the Bacterial Virulence. Mol. Plant-Microbe Interact. 2010, 23, 871-878.
-
(2010)
Mol. Plant-Microbe Interact.
, vol.23
, pp. 871-878
-
-
Li, Y.1
Yamazaki, A.2
Zou, L.3
Biddle, E.4
Zeng, Q.5
Wang, Y.6
Lin, H.7
Wang, Q.8
Yang, C.9
-
35
-
-
0025215915
-
Secretion Processing and Activation of Erwinia chrysanthemi Proteases
-
Wandersman, C.; Delepelaire, P.; Letoffe, S. Secretion Processing and Activation of Erwinia chrysanthemi Proteases. Biochimie 1990, 72, 143-146.
-
(1990)
Biochimie
, vol.72
, pp. 143-146
-
-
Wandersman, C.1
Delepelaire, P.2
Letoffe, S.3
-
36
-
-
8844287629
-
Identification and Characterization of Nip Necrosis-Inducing Virulence Protein of Erwinia carotovora Subsp carotovora
-
Mattinen, L.; Tshuikina, M.; Mae, A.; Pirhonen, M. Identification and Characterization of Nip, Necrosis-Inducing Virulence Protein of Erwinia carotovora Subsp carotovora. Mol. Plant-Microbe Interact. 2004, 17, 1366-1375.
-
(2004)
Mol. Plant-Microbe Interact.
, vol.17
, pp. 1366-1375
-
-
Mattinen, L.1
Tshuikina, M.2
Mae, A.3
Pirhonen, M.4
-
37
-
-
67649880530
-
A Common Toxin Fold Mediates Microbial Attack and Plant Defense
-
Ottmann, C.; Luberacki, B.; Kuefner, I.; Koch, W.; Brunner, F.; Weyand, M.; Mattinen, L.; Pirhonen, M.; Anderluh, G.; Seitz, H.U.; et al. A Common Toxin Fold Mediates Microbial Attack and Plant Defense. Proc. Natl. Acad. Sci. USA 2009, 106, 10359-10364.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 10359-10364
-
-
Ottmann, C.1
Luberacki, B.2
Kuefner, I.3
Koch, W.4
Brunner, F.5
Weyand, M.6
Mattinen, L.7
Pirhonen, M.8
Anderluh, G.9
Seitz, H.U.10
-
38
-
-
5644233706
-
The Secretome of the Plant Pathogenic Bacterium Erwinia chrysanthemi
-
Kazemi-Pour, N.; Condemine, G.; Hugouvieux-Cotte-Pattat, N. The Secretome of the Plant Pathogenic Bacterium Erwinia chrysanthemi. Proteomics 2004, 4, 3177-3186.
-
(2004)
Proteomics
, vol.4
, pp. 3177-3186
-
-
Kazemi-Pour, N.1
Condemine, G.2
Hugouvieux-Cotte-Pattat, N.3
-
39
-
-
0032743775
-
Withholding and Exchanging Iron: Interactions between Erwinia spp. and their Plant Hosts
-
Expert, D. Withholding and Exchanging Iron: Interactions between Erwinia spp. and their Plant Hosts. Annu. Rev. Phytopathol. 1999, 37, 307-334.
-
(1999)
Annu. Rev. Phytopathol.
, vol.37
, pp. 307-334
-
-
Expert, D.1
-
40
-
-
39749161043
-
Differential Role of Ferritins in Iron Metabolism and Virulence of the Plant-Pathogenic Bacterium Erwinia chrysanthemi 3937
-
Boughammoura, A.; Matzanke, B.F.; Boettger, L.; Reverchon, S.; Lesuisse, E.; Expert, D.; Franza, T. Differential Role of Ferritins in Iron Metabolism and Virulence of the Plant-Pathogenic Bacterium Erwinia chrysanthemi 3937. J. Bacteriol. 2008, 190, 1518-1530.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 1518-1530
-
-
Boughammoura, A.1
Matzanke, B.F.2
Boettger, L.3
Reverchon, S.4
Lesuisse, E.5
Expert, D.6
Franza, T.7
-
41
-
-
84862755310
-
Role of the Dickeya dadantii Dps Protein
-
Boughammoura, A.; Expert, D.; Franza, T. Role of the Dickeya dadantii Dps Protein. Biometals 2012, 25, 423-433.
-
(2012)
Biometals
, vol.25
, pp. 423-433
-
-
Boughammoura, A.1
Expert, D.2
Franza, T.3
-
42
-
-
33947426026
-
Proteomic Analysis of a Non-Virulent Mutant of the Phytopathogenic Bacterium Erwinia chrysanthemi Deficient in Osmoregulated Periplasmic Glucans: Change in Protein Expression is Not Restricted to the Envelope, but Affects General Metabolism
-
Bouchart, F.; Delangle, A.; Lemoine, J.; Bohin, J.; Lacroix, J. Proteomic Analysis of a Non-Virulent Mutant of the Phytopathogenic Bacterium Erwinia chrysanthemi Deficient in Osmoregulated Periplasmic Glucans: Change in Protein Expression is Not Restricted to the Envelope, but Affects General Metabolism. Microbiology-(UK) 2007, 153, 760-767.
-
(2007)
Microbiology-(UK)
, vol.153
, pp. 760-767
-
-
Bouchart, F.1
Delangle, A.2
Lemoine, J.3
Bohin, J.4
Lacroix, J.5
-
43
-
-
0032100327
-
Inactivation of the sapA to sapF Locus of Erwinia chrysanthemi Reveals Common Features in Plant and Animal Bacterial Pathogenesis
-
Lopez-Solanilla, E.; Garcia-Olmedo, F.; Rodriguez-Palenzuela, P. Inactivation of the sapA to sapF Locus of Erwinia chrysanthemi Reveals Common Features in Plant and Animal Bacterial Pathogenesis. Plant Cell 1998, 10, 917-924.
-
(1998)
Plant Cell
, vol.10
, pp. 917-924
-
-
Lopez-Solanilla, E.1
Garcia-Olmedo, F.2
Rodriguez-Palenzuela, P.3
-
44
-
-
84856179557
-
Dickeya dadantii, a Plant Pathogenic Bacterium Producing Cyt-Like Entomotoxins
-
Costechareyre, D.; Balmand, S.; Condemine, G.; Rahbe, Y. Dickeya dadantii, a Plant Pathogenic Bacterium Producing Cyt-Like Entomotoxins, Causes Septicemia in the Pea Aphid Acyrthosiphon pisum. PLoS One 2012, 7, e30702.
-
(2012)
Causes Septicemia in the Pea Aphid Acyrthosiphon pisum. PLoS One
, vol.7
-
-
Costechareyre, D.1
Balmand, S.2
Condemine, G.3
Rahbe, Y.4
-
45
-
-
84871930308
-
The Role of Secretion Systems and Small Molecules in Soft-Rot Enterobacteriaceae Pathogenicity
-
Charkowski, A.; Blanco, C.; Condemine, G.; Expert, D.; Franza, T.; Hayes, C.; Hugouvieux-Cotte-Pattat, N.; Lopez Solanilla, E.; Low, D.; Moleleki, L.; et al. The Role of Secretion Systems and Small Molecules in Soft-Rot Enterobacteriaceae Pathogenicity. Annu. Rev. Phytopathol. 2012, 50, 425-449.
-
(2012)
Annu. Rev. Phytopathol.
, vol.50
, pp. 425-449
-
-
Charkowski, A.1
Blanco, C.2
Condemine, G.3
Expert, D.4
Franza, T.5
Hayes, C.6
Hugouvieux-Cotte-Pattat, N.7
Lopez Solanilla, E.8
Low, D.9
Moleleki, L.10
-
46
-
-
51149091621
-
Microarray Profiling of Host-Extract-Induced Genes and Characterization of the Type VI Secretion Cluster in the Potato Pathogen Pectobacterium atrosepticum
-
Mattinen, L.; Somervuo, P.; Nykyri, J.; Nissinen, R.; Kouvonen, P.; Corthals, G.; Auvinen, P.; Aittamaa, M.; Valkonen, J.P.T.; Pirhonen, M. Microarray Profiling of Host-Extract-Induced Genes and Characterization of the Type VI Secretion Cluster in the Potato Pathogen Pectobacterium atrosepticum. Microbiology-(UK) 2008, 154, 2387-2396.
-
(2008)
Microbiology-(UK)
, vol.154
, pp. 2387-2396
-
-
Mattinen, L.1
Somervuo, P.2
Nykyri, J.3
Nissinen, R.4
Kouvonen, P.5
Corthals, G.6
Auvinen, P.7
Aittamaa, M.8
Valkonen, J.P.T.9
Pirhonen, M.10
-
47
-
-
84874693252
-
Vfm a New Quorum Sensing System Controls the Virulence of Dickeya dadantii
-
Nasser, W.; Dorel, C.; Wawrzyniak, J.; Van Gijsegem, F.; Groleau, M.; Déziel, E.; Reverchon, S. Vfm a New Quorum Sensing System Controls the Virulence of Dickeya dadantii. Environ. Microbiol. 2013, 15, 865-880.
-
(2013)
Environ. Microbiol.
, vol.15
, pp. 865-880
-
-
Nasser, W.1
Dorel, C.2
Wawrzyniak, J.3
Van Gijsegem, F.4
Groleau, M.5
Déziel, E.6
Reverchon, S.7
-
48
-
-
0033135461
-
Self-Regulation of Pir, a Regulatory Protein Responsible for Hyperinduction of Pectate Lyase in Erwinia chrysanthemi EC16
-
Nomura, K.; Nasser, W.; Tsuyumu, S. Self-Regulation of Pir, a Regulatory Protein Responsible for Hyperinduction of Pectate Lyase in Erwinia chrysanthemi EC16. Mol. Plant-Microbe Interact. 1999, 12, 385-390.
-
(1999)
Mol. Plant-Microbe Interact.
, vol.12
, pp. 385-390
-
-
Nomura, K.1
Nasser, W.2
Tsuyumu, S.3
-
49
-
-
67749097789
-
The Complete Genome of Teredinibacter turnerae T7901: An Intracellular Endosymbiont of Marine Wood-Boring Bivalves (Shipworms)
-
Yang, J.C.; Madupu, R.; Durkin, A.S.; Ekborg, N.A.; Pedamallu, C.S.; Hostetler, J.B.; Radune, D.; Toms, B.S.; Henrissat, B.; Coutinho, P.M.; et al. The Complete Genome of Teredinibacter turnerae T7901: An Intracellular Endosymbiont of Marine Wood-Boring Bivalves (Shipworms). PLoS One 2009, 4, e6085.
-
(2009)
PLoS One
, vol.4
-
-
Yang, J.C.1
Madupu, R.2
Durkin, A.S.3
Ekborg, N.A.4
Pedamallu, C.S.5
Hostetler, J.B.6
Radune, D.7
Toms, B.S.8
Henrissat, B.9
Coutinho, P.M.10
-
50
-
-
34848911303
-
Polyketide Synthases and Nonribosomal Peptide Synthetases: The Emerging View from Bacterial Genomics
-
Donadio, S.; Monciardini, P.; Sosio, M. Polyketide Synthases and Nonribosomal Peptide Synthetases: The Emerging View from Bacterial Genomics. Nat. Prod. Rep. 2007, 24, 1073-1109.
-
(2007)
Nat. Prod. Rep.
, vol.24
, pp. 1073-1109
-
-
Donadio, S.1
Monciardini, P.2
Sosio, M.3
-
51
-
-
0035673048
-
The Biosynthetic Gene Cluster for the Anticancer Drug Bleomycin from Streptomyces verticillus ATCC15003 as a Model for Hybrid Peptide-Polyketide Natural Product Biosynthesis
-
Shen, B.; Du, L.; Sanchez, C.; Edwards, D.J.; Chen, M.; Murrell, J.M. The Biosynthetic Gene Cluster for the Anticancer Drug Bleomycin from Streptomyces verticillus ATCC15003 as a Model for Hybrid Peptide-Polyketide Natural Product Biosynthesis. J. Ind. Microbiol. Biotechnol. 2001, 27, 378-385.
-
(2001)
J. Ind. Microbiol. Biotechnol.
, vol.27
, pp. 378-385
-
-
Shen, B.1
Du, L.2
Sanchez, C.3
Edwards, D.J.4
Chen, M.5
Murrell, J.M.6
-
52
-
-
77954675603
-
Biosynthesis of Polyketides by Trans-AT Polyketide Synthases
-
Piel, J. Biosynthesis of Polyketides by Trans-AT Polyketide Synthases. Nat. Prod. Rep. 2010, 27, 996-1047.
-
(2010)
Nat. Prod. Rep.
, vol.27
, pp. 996-1047
-
-
Piel, J.1
-
53
-
-
34247155293
-
Volatiles of Bacterial Antagonists Inhibit Mycelial Growth of the Plant Pathogen Rhizoctonia solani
-
Kai, M.; Effmert, U.; Berg, G.; Piechulla, B. Volatiles of Bacterial Antagonists Inhibit Mycelial Growth of the Plant Pathogen Rhizoctonia solani. Arch. Microbiol. 2007, 187, 351-360.
-
(2007)
Arch. Microbiol.
, vol.187
, pp. 351-360
-
-
Kai, M.1
Effmert, U.2
Berg, G.3
Piechulla, B.4
-
54
-
-
84869054540
-
Bacterial Biosynthetic Gene Clusters Encoding the Anti-Cancer Haterumalide Class of Molecules: Biogenesis of the Broad Spectrum Antifungal and Anti-Oomycete Compound
-
Matilla, M.A.; Stoeckmann, H.; Leeper, F.J.; Salmond, G.P.C. Bacterial Biosynthetic Gene Clusters Encoding the Anti-Cancer Haterumalide Class of Molecules: Biogenesis of the Broad Spectrum Antifungal and Anti-Oomycete Compound, Oocydin A. J. Biol. Chem. 2012, 287, 39125-39138.
-
(2012)
Oocydin A. J. Biol. Chem.
, vol.287
, pp. 39125-39138
-
-
Matilla, M.A.1
Stoeckmann, H.2
Leeper, F.J.3
Salmond, G.P.C.4
-
55
-
-
84863595614
-
Complete Genome Sequence of Serratia plymuthica Strain AS12
-
Neupane, S.; Finlay, R.D.; Alstrom, S.; Goodwin, L.; Kyrpides, N.C.; Lucas, S.; Lapidus, A.; Bruce, D.; Pitluck, S.; Peters, L.; et al. Complete Genome Sequence of Serratia plymuthica Strain AS12. Stand. Genomic Sci. 2012, 6, 165-173.
-
(2012)
Stand. Genomic Sci.
, vol.6
, pp. 165-173
-
-
Neupane, S.1
Finlay, R.D.2
Alstrom, S.3
Goodwin, L.4
Kyrpides, N.C.5
Lucas, S.6
Lapidus, A.7
Bruce, D.8
Pitluck, S.9
Peters, L.10
-
56
-
-
75649147683
-
C-13 Labeling Reveals Multiple Amination Reactions in the Biosynthesis of a Novel Polyketide Polyamine Antibiotic Zeamine from Dickeya zeae
-
Wu, J.; Zhang, H.; Xu, J.; Cox, R.J.; Simpson, T.J.; Zhang, L. C-13 Labeling Reveals Multiple Amination Reactions in the Biosynthesis of a Novel Polyketide Polyamine Antibiotic Zeamine from Dickeya zeae. Chem. Commun. 2010, 46, 333-335.
-
(2010)
Chem. Commun.
, vol.46
, pp. 333-335
-
-
Wu, J.1
Zhang, H.2
Xu, J.3
Cox, R.J.4
Simpson, T.J.5
Zhang, L.6
-
57
-
-
80052634993
-
A Novel Multidomain Polyketide Synthase is Essential for Zeamine Production and the Virulence of Dickeya zeae
-
Zhou, J.; Zhang, H.; Wu, J.; Liu, Q.; Xi, P.; Lee, J.; Liao, J.; Jiang, Z.; Zhang, L. A Novel Multidomain Polyketide Synthase is Essential for Zeamine Production and the Virulence of Dickeya zeae. Mol. Plant-Microbe Interact. 2011, 24, 1156-1164.
-
(2011)
Mol. Plant-Microbe Interact.
, vol.24
, pp. 1156-1164
-
-
Zhou, J.1
Zhang, H.2
Wu, J.3
Liu, Q.4
Xi, P.5
Lee, J.6
Liao, J.7
Jiang, Z.8
Zhang, L.9
-
58
-
-
84872506002
-
A PKS/NRPS/FAS Hybrid Gene Cluster from Serratia plymuthica RVH1 Encoding the Biosynthesis of Three Broad Spectrum Zeamine-Related Antibiotics
-
Masschelein, J.; Mattheus, W.; Gao, L.; Moons, P.; van Houdt, R.; Uytterhoeven, B.; Lamberigts, C.; Lescrinier, E.; Rozenski, J.; Herdewijn, P.; et al. A PKS/NRPS/FAS Hybrid Gene Cluster from Serratia plymuthica RVH1 Encoding the Biosynthesis of Three Broad Spectrum, Zeamine-Related Antibiotics. PLoS One 2013, 8, e54143.
-
(2013)
PLoS One
, vol.8
-
-
Masschelein, J.1
Mattheus, W.2
Gao, L.3
Moons, P.4
van Houdt, R.5
Uytterhoeven, B.6
Lamberigts, C.7
Lescrinier, E.8
Rozenski, J.9
Herdewijn, P.10
-
59
-
-
0034796211
-
Hybrid Peptide-Polyketide Natural Products: Biosynthesis and Prospects Toward Engineering Novel Molecules
-
Du, L.H.; Sanchez, C.; Shen, B. Hybrid Peptide-Polyketide Natural Products: Biosynthesis and Prospects Toward Engineering Novel Molecules. Metab. Eng. 2001, 3, 78-95.
-
(2001)
Metab. Eng.
, vol.3
, pp. 78-95
-
-
Du, L.H.1
Sanchez, C.2
Shen, B.3
-
60
-
-
0031035424
-
A Locus Coding for Putative Non Ribosomal peptide/polyketide Synthase Functions is Mutated in a Swarming-Defective Proteus mirabilis Strain
-
Gaisser, S.; Hughes, C. A Locus Coding for Putative Non Ribosomal peptide/polyketide Synthase Functions is Mutated in a Swarming-Defective Proteus mirabilis Strain. Mol. Gen. Genet. 1997, 253, 415-427.
-
(1997)
Mol. Gen. Genet.
, vol.253
, pp. 415-427
-
-
Gaisser, S.1
Hughes, C.2
-
61
-
-
0031948133
-
Antibiotic Resistance Caused by Gram-Negative Multidrug Efflux Pumps
-
Nikaido, H. Antibiotic Resistance Caused by Gram-Negative Multidrug Efflux Pumps. Clin. Infect. Dis. 1998, 27, S32-S41.
-
(1998)
Clin. Infect. Dis.
, vol.27
-
-
Nikaido, H.1
-
62
-
-
0035972863
-
Characterization of a Putative RND-Type Efflux System in Agrobacterium tumefaciens
-
Peng, W.; Nester, E. Characterization of a Putative RND-Type Efflux System in Agrobacterium tumefaciens. Gene 2001, 270, 245-252.
-
(2001)
Gene
, vol.270
, pp. 245-252
-
-
Peng, W.1
Nester, E.2
-
63
-
-
1642506329
-
The Phytoalexin-Inducible Multidrug Efflux Pump AcrAB Contributes to Virulence in the Fire Blight Pathogen Erwinia amylovora. Mol
-
Burse, A.; Weingart, H.; Ullrich, M. The Phytoalexin-Inducible Multidrug Efflux Pump AcrAB Contributes to Virulence in the Fire Blight Pathogen, Erwinia amylovora. Mol. Plant-Microbe Interact. 2004, 17, 43-54.
-
(2004)
Plant-Microbe Interact
, vol.17
, pp. 43-54
-
-
Burse, A.1
Weingart, H.2
Ullrich, M.3
-
64
-
-
33646874801
-
The Role of several Multidrug Resistance Systems in Erwinia chrysanthemi Pathogenesis
-
Valecillos, A.; Palenzuela, P.; Lopez-Solanilia, E. The Role of several Multidrug Resistance Systems in Erwinia chrysanthemi Pathogenesis. Mol. Plant-Microbe Interact. 2006, 19, 607-613.
-
(2006)
Mol. Plant-Microbe Interact.
, vol.19
, pp. 607-613
-
-
Valecillos, A.1
Palenzuela, P.2
Lopez-Solanilia, E.3
-
65
-
-
44349168746
-
Restriction-Modification Systems
-
2nd ed.; Streips, U.N., Yasbin, R.E., Eds.; Wiley-Liss, Inc.: New York, NY, USA, ISBN: 978-0-471-38665-0
-
Blumenthal, R.M.; Cheng, X. Restriction-Modification Systems. In Modern Microbial Genetics, 2nd ed.; Streips, U.N., Yasbin, R.E., Eds.; Wiley-Liss, Inc.: New York, NY, USA, 2002; ISBN: 978-0-471-38665-0, p. 178.
-
(2002)
Modern Microbial Genetics
, pp. 178
-
-
Blumenthal, R.M.1
Cheng, X.2
-
66
-
-
84890954650
-
-
University of Helsinki, Helsinki, Finland. Personal Communication
-
Pirhonen, Minna. University of Helsinki, Helsinki, Finland. Personal Communication, 2012.
-
(2012)
-
-
Pirhonen, M.1
-
67
-
-
0032843484
-
Microbial Ubiquinones: Multiple Roles in Respiration Gene Regulation and Oxidative Stress Management
-
Soballe, B.; Poole, R. Microbial Ubiquinones: Multiple Roles in Respiration, Gene Regulation and Oxidative Stress Management. Microbiology-(UK) 1999, 145, 1817-1830.
-
(1999)
Microbiology-(UK)
, vol.145
, pp. 1817-1830
-
-
Soballe, B.1
Poole, R.2
-
68
-
-
0036229614
-
Roles of NapF, NapG and NapH, Subunits of the Escherichia coli periplasmic Nitrate Reductase, in Ubiquinol Oxidation
-
Brondijk, T.; Fiegen, D.; Richardson, D.; Cole, J. Roles of NapF, NapG and NapH, Subunits of the Escherichia coli periplasmic Nitrate Reductase, in Ubiquinol Oxidation. Mol. Microbiol. 2002, 44, 245-255.
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 245-255
-
-
Brondijk, T.1
Fiegen, D.2
Richardson, D.3
Cole, J.4
-
69
-
-
83655183031
-
Identification of a Novel Gene for Biosynthesis of a Bacteroid-Specific Electron Carrier Menaquinone
-
Xie, F.; Cheng, G.; Xu, H.; Wang, Z.; Lei, L.; Li, Y. Identification of a Novel Gene for Biosynthesis of a Bacteroid-Specific Electron Carrier Menaquinone. PLoS One 2011, 6, e28995.
-
(2011)
PLoS One
, vol.6
-
-
Xie, F.1
Cheng, G.2
Xu, H.3
Wang, Z.4
Lei, L.5
Li, Y.6
-
70
-
-
60149088444
-
Genomic Islands: Tools of Bacterial Horizontal Gene Transfer and Evolution
-
Juhas, M.; van der Meer, J.R.; Gaillard, M.; Harding, R.M.; Hood, D.W.; Crook, D.W. Genomic Islands: Tools of Bacterial Horizontal Gene Transfer and Evolution. FEMS Microbiol. Rev. 2009, 33, 376-393.
-
(2009)
FEMS Microbiol. Rev.
, vol.33
, pp. 376-393
-
-
Juhas, M.1
van der Meer, J.R.2
Gaillard, M.3
Harding, R.M.4
Hood, D.W.5
Crook, D.W.6
-
71
-
-
1642475095
-
Pathogenicity Islands in Bacterial Pathogenesis
-
Schmidt, H.; Hensel, M. Pathogenicity Islands in Bacterial Pathogenesis. Clin. Microbiol. Rev. 2004, 17, 14-56.
-
(2004)
Clin. Microbiol. Rev
, vol.17
, pp. 14-56
-
-
Schmidt, H.1
Hensel, M.2
|