-
1
-
-
71549117585
-
Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome
-
Wisniewski, J. R.; Zougman, A.; Mann, M. Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome J. Proteome Res. 2009, 8 (12) 5674-5678
-
(2009)
J. Proteome Res.
, vol.8
, Issue.12
, pp. 5674-5678
-
-
Wisniewski, J.R.1
Zougman, A.2
Mann, M.3
-
2
-
-
67349266694
-
Universal sample preparation method for proteome analysis
-
Wisniewski, J. R. Universal sample preparation method for proteome analysis Nat. Methods 2009, 6 (5) 359-362
-
(2009)
Nat. Methods
, vol.6
, Issue.5
, pp. 359-362
-
-
Wisniewski, J.R.1
-
3
-
-
79960057974
-
Identification of alternative splice variants in Aspergillus flavus through comparison of multiple tandem MS search algorithms
-
Chang, K. Y.; Muddiman, D. C. Identification of alternative splice variants in Aspergillus flavus through comparison of multiple tandem MS search algorithms BMC Genomics 2011, 12, 358
-
(2011)
BMC Genomics
, vol.12
, pp. 358
-
-
Chang, K.Y.1
Muddiman, D.C.2
-
4
-
-
84870862194
-
In-depth analysis of the Magnaporthe oryzae conidial proteome
-
Gokce, E. In-depth analysis of the Magnaporthe oryzae conidial proteome J. Proteome Res. 2012, 11 (12) 5827-5835
-
(2012)
J. Proteome Res.
, vol.11
, Issue.12
, pp. 5827-5835
-
-
Gokce, E.1
-
5
-
-
67650725988
-
Computational principles of determining and improving mass precision and accuracy for proteome measurements in an Orbitrap
-
Cox, J.; Mann, M. Computational principles of determining and improving mass precision and accuracy for proteome measurements in an Orbitrap J. Am. Soc. Mass Spectrom. 2009, 20 (8) 1477-1485
-
(2009)
J. Am. Soc. Mass Spectrom.
, vol.20
, Issue.8
, pp. 1477-1485
-
-
Cox, J.1
Mann, M.2
-
6
-
-
84856040216
-
Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technological Aspects
-
Karpievitch, Y. V. Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technological Aspects Ann. Appl. Stat 2010, 4 (4) 1797-1823
-
(2010)
Ann. Appl. Stat
, vol.4
, Issue.4
, pp. 1797-1823
-
-
Karpievitch, Y.V.1
-
7
-
-
84885651630
-
Getting intimate with trypsin, the leading protease in proteomics
-
Vandermarliere, E.; Mueller, M.; Martens, L. Getting intimate with trypsin, the leading protease in proteomics Mass Spectrom. Rev. 2013, 0
-
(2013)
Mass Spectrom. Rev.
, pp. 0
-
-
Vandermarliere, E.1
Mueller, M.2
Martens, L.3
-
8
-
-
26844565856
-
Chemically modified, immobilized trypsin reactor with improved digestion efficiency
-
Freije, J. R. Chemically modified, immobilized trypsin reactor with improved digestion efficiency J. Proteome Res. 2005, 4 (5) 1805-1813
-
(2005)
J. Proteome Res.
, vol.4
, Issue.5
, pp. 1805-1813
-
-
Freije, J.R.1
-
9
-
-
84866547413
-
Trypsin immobilization on silica beads modified by squamous polymer for ultra fast and highly efficient proteome digestion
-
Song, Z. Trypsin immobilization on silica beads modified by squamous polymer for ultra fast and highly efficient proteome digestion Se Pu 2012, 30 (6) 549-554
-
(2012)
Se Pu
, vol.30
, Issue.6
, pp. 549-554
-
-
Song, Z.1
-
10
-
-
3042815334
-
Trypsin cleaves exclusively C-terminal to arginine and lysine residues
-
Olsen, J. V.; Ong, S. E.; Mann, M. Trypsin cleaves exclusively C-terminal to arginine and lysine residues Mol. Cell. Proteomics 2004, 3 (6) 608-14
-
(2004)
Mol. Cell. Proteomics
, vol.3
, Issue.6
, pp. 608-614
-
-
Olsen, J.V.1
Ong, S.E.2
Mann, M.3
-
11
-
-
84865791474
-
Peptide production and decay rates affect the quantitative accuracy of protein cleavage isotope dilution mass spectrometry (PC-IDMS)
-
Shuford, C. M. Peptide production and decay rates affect the quantitative accuracy of protein cleavage isotope dilution mass spectrometry (PC-IDMS) Mol. Cell. Proteomics: MCP 2012, 11 (9) 814-823
-
(2012)
Mol. Cell. Proteomics: MCP
, vol.11
, Issue.9
, pp. 814-823
-
-
Shuford, C.M.1
-
12
-
-
0025711351
-
High-performance displacement chromatography-mass spectrometry of tryptic peptides of recombinant human growth hormone
-
Frenz, J.; Bourell, J.; Hancock, W. S. High-performance displacement chromatography-mass spectrometry of tryptic peptides of recombinant human growth hormone J. Chromatogr. 1990, 512, 299-314
-
(1990)
J. Chromatogr.
, vol.512
, pp. 299-314
-
-
Frenz, J.1
Bourell, J.2
Hancock, W.S.3
-
13
-
-
0025081420
-
Recognition of trypsin autolysis products by high-performance liquid chromatography and mass spectrometry
-
Vestling, M. M.; Murphy, C. M.; Fenselau, C. Recognition of trypsin autolysis products by high-performance liquid chromatography and mass spectrometry Anal. Chem. 1990, 62 (21) 2391-2394
-
(1990)
Anal. Chem.
, vol.62
, Issue.21
, pp. 2391-2394
-
-
Vestling, M.M.1
Murphy, C.M.2
Fenselau, C.3
-
14
-
-
20644443909
-
Kinetic characterization of sequencing grade modified trypsin
-
Finehout, E. J.; Cantor, J. R.; Lee, K. H. Kinetic characterization of sequencing grade modified trypsin Proteomics 2005, 5 (9) 2319-2321
-
(2005)
Proteomics
, vol.5
, Issue.9
, pp. 2319-2321
-
-
Finehout, E.J.1
Cantor, J.R.2
Lee, K.H.3
-
15
-
-
79955443321
-
Targeted proteomic analysis of glycolysis in cancer cells
-
Murphy, J. P.; Pinto, D. M. Targeted proteomic analysis of glycolysis in cancer cells J. Proteome Res. 2011, 10 (2) 604-613
-
(2011)
J. Proteome Res.
, vol.10
, Issue.2
, pp. 604-613
-
-
Murphy, J.P.1
Pinto, D.M.2
-
16
-
-
1842528125
-
13C-labeled peptide standards
-
13C-labeled peptide standards Proteomics 2004, 4 (4) 1175-1186
-
(2004)
Proteomics
, vol.4
, Issue.4
, pp. 1175-1186
-
-
Kuhn, E.1
-
17
-
-
84858725817
-
Consecutive Proteolytic Digestion in an Enzyme Reactor Increases Depth of Proteomic and Phosphoproteomic Analysis
-
Wisniewski, J. R.; Mann, M. Consecutive Proteolytic Digestion in an Enzyme Reactor Increases Depth of Proteomic and Phosphoproteomic Analysis Anal. Chem. 2012, 84 (6) 2631-2637
-
(2012)
Anal. Chem.
, vol.84
, Issue.6
, pp. 2631-2637
-
-
Wisniewski, J.R.1
Mann, M.2
-
18
-
-
67650982761
-
Optimization of digestion parameters for protein quantification
-
Norrgran, J. Optimization of digestion parameters for protein quantification Anal. Biochem. 2009, 393 (1) 48-55
-
(2009)
Anal. Biochem.
, vol.393
, Issue.1
, pp. 48-55
-
-
Norrgran, J.1
-
19
-
-
84865584315
-
Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC-MS/MS based protein quantification and metabolic flux analysis
-
Wang, J. P. Functional redundancy of the two 5-hydroxylases in monolignol biosynthesis of Populus trichocarpa: LC-MS/MS based protein quantification and metabolic flux analysis Planta 2012, 236 (3) 795-808
-
(2012)
Planta
, vol.236
, Issue.3
, pp. 795-808
-
-
Wang, J.P.1
-
20
-
-
84861831985
-
Comprehensive Quantification of Monolignol-Pathway Enzymes in Populus trichocarpa by Protein Cleavage Isotope Dilution Mass Spectrometry
-
Shuford, C. M. Comprehensive Quantification of Monolignol-Pathway Enzymes in Populus trichocarpa by Protein Cleavage Isotope Dilution Mass Spectrometry J. Proteome Res. 2012, 11, 3390-3404
-
(2012)
J. Proteome Res.
, vol.11
, pp. 3390-3404
-
-
Shuford, C.M.1
-
21
-
-
0025823806
-
A continuous fluorescent assay for measuring protease activity using natural protein substrate
-
Farmer, W. H.; Yuan, Z. Y. A continuous fluorescent assay for measuring protease activity using natural protein substrate Anal. Biochem. 1991, 197 (2) 347-352
-
(1991)
Anal. Biochem.
, vol.197
, Issue.2
, pp. 347-352
-
-
Farmer, W.H.1
Yuan, Z.Y.2
-
22
-
-
61849133375
-
Absolute quantification of C-reactive protein in human plasma derived from patients with epithelial ovarian cancer utilizing protein cleavage isotope dilution mass spectrometry
-
Williams, D. K.; Muddiman, D. C. Absolute quantification of C-reactive protein in human plasma derived from patients with epithelial ovarian cancer utilizing protein cleavage isotope dilution mass spectrometry J. Proteome Res. 2009, 8 (2) 1085-1090
-
(2009)
J. Proteome Res.
, vol.8
, Issue.2
, pp. 1085-1090
-
-
Williams, D.K.1
Muddiman, D.C.2
-
23
-
-
84879592194
-
Multi-peptide nLC-PC-IDMS-SRM-based Assay for the quantification of biomarkers in the chicken ovarian cancer model
-
Andrews Kingon, G. L. Multi-peptide nLC-PC-IDMS-SRM-based Assay for the quantification of biomarkers in the chicken ovarian cancer model Methods 2013, 61 (3) 323-330
-
(2013)
Methods
, vol.61
, Issue.3
, pp. 323-330
-
-
Andrews Kingon, G.L.1
-
24
-
-
4444301306
-
Absolute quantification of the model biomarker prostate-specific antigen in serum by LC-Ms/MS using protein cleavage and isotope dilution mass spectrometry
-
Barnidge, D. R. Absolute quantification of the model biomarker prostate-specific antigen in serum by LC-Ms/MS using protein cleavage and isotope dilution mass spectrometry J. Proteome Res. 2004, 3 (3) 644-652
-
(2004)
J. Proteome Res.
, vol.3
, Issue.3
, pp. 644-652
-
-
Barnidge, D.R.1
-
25
-
-
84856232977
-
Absolute quantification of free glutathione and cysteine in aquatic insects using isotope dilution and selected reaction monitoring
-
Shuford, C. M. Absolute quantification of free glutathione and cysteine in aquatic insects using isotope dilution and selected reaction monitoring Anal. Bioanal. Chem. 2012, 402 (1) 357-366
-
(2012)
Anal. Bioanal. Chem.
, vol.402
, Issue.1
, pp. 357-366
-
-
Shuford, C.M.1
-
26
-
-
35348863892
-
High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites
-
Stahl-Zeng, J. High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites Mol. Cell. Proteomics: MCP 2007, 6 (10) 1809-1817
-
(2007)
Mol. Cell. Proteomics: MCP
, vol.6
, Issue.10
, pp. 1809-1817
-
-
Stahl-Zeng, J.1
-
27
-
-
74549176584
-
Towards a systems approach for lignin biosynthesis in Populus trichocarpa: Transcript abundance and specificity of the monolignol biosynthetic genes
-
Shi, R. Towards a systems approach for lignin biosynthesis in Populus trichocarpa: transcript abundance and specificity of the monolignol biosynthetic genes Plant Cell Physiol. 2010, 51 (1) 144-163
-
(2010)
Plant Cell Physiol.
, vol.51
, Issue.1
, pp. 144-163
-
-
Shi, R.1
-
28
-
-
0016160429
-
Measurement of protein by spectrophotometry at 205 nm
-
Scopes, R. K. Measurement of protein by spectrophotometry at 205 nm Anal. Biochem. 1974, 59 (1) 277-282
-
(1974)
Anal. Biochem.
, vol.59
, Issue.1
, pp. 277-282
-
-
Scopes, R.K.1
-
29
-
-
77951965920
-
Skyline: An open source document editor for creating and analyzing targeted proteomics experiments
-
MacLean, B. Skyline: an open source document editor for creating and analyzing targeted proteomics experiments Bioinformatics 2010, 26 (7) 966-968
-
(2010)
Bioinformatics
, vol.26
, Issue.7
, pp. 966-968
-
-
MacLean, B.1
-
30
-
-
78650355102
-
Effect of collision energy optimization on the measurement of peptides by selected reaction monitoring (SRM) mass spectrometry
-
Maclean, B. Effect of collision energy optimization on the measurement of peptides by selected reaction monitoring (SRM) mass spectrometry Analytical Chem. 2010, 82 (24) 10116-10124
-
(2010)
Analytical Chem.
, vol.82
, Issue.24
, pp. 10116-10124
-
-
Maclean, B.1
-
31
-
-
79955759830
-
Improving proteome coverage on a LTQ-Orbitrap using design of experiments
-
Andrews, G. L. Improving proteome coverage on a LTQ-Orbitrap using design of experiments J. Am. Soc. Mass Spectrom. 2011, 22 (4) 773-783
-
(2011)
J. Am. Soc. Mass Spectrom.
, vol.22
, Issue.4
, pp. 773-783
-
-
Andrews, G.L.1
-
32
-
-
84881166708
-
Cutting Edge Proteomics: Benchmarking of Six Commercial Trypsins
-
Bunkenborg, J.; Espadas, G.; Molina, H. Cutting Edge Proteomics: Benchmarking of Six Commercial Trypsins J. Proteome Res. 2013, 12, 3631-3641
-
(2013)
J. Proteome Res.
, vol.12
, pp. 3631-3641
-
-
Bunkenborg, J.1
Espadas, G.2
Molina, H.3
-
33
-
-
0014936037
-
An effect of calcium ions on the activity, heat stability, and structure of trypsin
-
Sipos, T.; Merkel, J. R. An effect of calcium ions on the activity, heat stability, and structure of trypsin Biochemistry 1970, 9 (14) 2766-2775
-
(1970)
Biochemistry
, vol.9
, Issue.14
, pp. 2766-2775
-
-
Sipos, T.1
Merkel, J.R.2
|