-
1
-
-
0030923630
-
The heme oxygenase system: A regulator of second messenger gases
-
Maines, M. D. (1997) The heme oxygenase system: a regulator of second messenger gases. Annu. Rev. Pharmacol. Toxicol. 37, 517-554
-
(1997)
Annu. Rev. Pharmacol. Toxicol
, vol.37
, pp. 517-554
-
-
Maines, M.D.1
-
2
-
-
0015501157
-
Immunochemical evidence for an association of heme oxygenase with the microsomal electron transport system
-
Schacter, B. A., Nelson, E. B., Marver, H. S., Masters, B. S. (1972) Immunochemical evidence for an association of heme oxygenase with the microsomal electron transport system. J. Biol. Chem. 247, 3601-3607
-
(1972)
J. Biol. Chem
, vol.247
, pp. 3601-3607
-
-
Schacter, B.A.1
Nelson, E.B.2
Marver, H.S.3
Masters, B.S.4
-
3
-
-
0030886381
-
Heme oxygenase 1 is required for mammalian iron reutilization
-
Poss, K. D., and Tonegawa, S. (1997) Heme oxygenase 1 is required for mammalian iron reutilization. Proc. Natl. Acad. Sci. U.S.A. 94, 10919- 10924
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 10919-10924
-
-
Poss, K.D.1
Tonegawa, S.2
-
5
-
-
84864285556
-
H2S signaling through protein sulfhydration and beyond
-
Paul, B. D., and Snyder, S. H. (2012) H2S signaling through protein sulfhydration and beyond. Nat. Rev. Mol. Cell Biol. 13, 499-507
-
(2012)
Nat. Rev. Mol. Cell Biol
, vol.13
, pp. 499-507
-
-
Paul, B.D.1
Snyder, S.H.2
-
6
-
-
0037898944
-
Autocatalytic radical reactions in physiological prosthetic heme modification
-
Colas, C., and Ortiz de Montellano, P. R. (2003) Autocatalytic radical reactions in physiological prosthetic heme modification. Chem. Rev. 103, 2305-2332
-
(2003)
Chem. Rev
, vol.103
, pp. 2305-2332
-
-
Colas, C.1
De Montellano, O.2
Ortiz De Montellano, P.R.3
-
7
-
-
34249826339
-
Heme and virulence: How bacterial pathogens regulate, transport, and utilize heme
-
Wilks, A., and Burkhard, K. A. (2007) Heme and virulence: How bacterial pathogens regulate, transport, and utilize heme. Nat. Prod. Rep. 24, 511-522
-
(2007)
Nat. Prod. Rep
, vol.24
, pp. 511-522
-
-
Wilks, A.1
Burkhard, K.A.2
-
8
-
-
78649921851
-
Overcoming the heme paradox: Heme toxicity and tolerance in bacterial pathogens
-
Anzaldi, L. L., and Skaar, E. P. (2010) Overcoming the heme paradox: Heme toxicity and tolerance in bacterial pathogens. Infect. Immun. 78, 4977-4989
-
(2010)
Infect. Immun
, vol.78
, pp. 4977-4989
-
-
Anzaldi, L.L.1
Skaar, E.P.2
-
9
-
-
77949416213
-
The IsdG-family of haem oxygenases degrades haem to a novel chromophore
-
Reniere, M. L., Ukpabi, G. N., Harry, S. R., Stec, D. F., Krull, R., Wright, D. W., Bachmann, B. O., Murphy, M. E., and Skaar, E. P. (2010) The IsdG-family of haem oxygenases degrades haem to a novel chromophore. Mol. Microbiol. 75, 1529-1538
-
(2010)
Mol. Microbiol
, vol.75
, pp. 1529-1538
-
-
Reniere, M.L.1
Ukpabi, G.N.2
Harry, S.R.3
Stec, D.F.4
Krull, R.5
Wright, D.W.6
Bachmann, B.O.7
Murphy, M.E.8
Skaar, E.P.9
-
10
-
-
84875981467
-
A new way to degrade heme: The Mycobacterium tuberculosis enzymeMhuDcatalyzes heme degradation without generating CO
-
Nambu, S., Matsui, T., Goulding, C. W., Takahashi, S., and Ikeda-Saito, M. (2013) A new way to degrade heme: The Mycobacterium tuberculosis enzymeMhuDcatalyzes heme degradation without generating CO. J. Biol. Chem. 288, 10101-10109
-
(2013)
J. Biol. Chem
, vol.288
, pp. 10101-10109
-
-
Nambu, S.1
Matsui, T.2
Goulding, C.W.3
Takahashi, S.4
Ikeda-Saito, M.5
-
11
-
-
84877315338
-
Heme degradation by Staphylococcus aureus IsdG and isdI liberates formaldehyde rather than carbon monoxide
-
Matsui, T., Nambu, S., Ono, Y., Goulding, C. W., Tsumoto, K., and Ikeda- Saito, M. (2013) Heme degradation by Staphylococcus aureus IsdG and isdI liberates formaldehyde rather than carbon monoxide. Biochemistry 52, 3025-3027
-
(2013)
Biochemistry
, vol.52
, pp. 3025-3027
-
-
Matsui, T.1
Nambu, S.2
Ono, Y.3
Goulding, C.W.4
Tsumoto, K.5
Ikeda- Saito, M.6
-
12
-
-
0031034090
-
Utilization of host iron sources by Corynebacterium diphtheriae: Identification of a gene whose product is homologous to eukaryotic heme oxygenases and is required for acquisition of iron from heme and hemoglobin
-
Schmitt, M. P. (1997) Utilization of host iron sources by Corynebacterium diphtheriae: Identification of a gene whose product is homologous to eukaryotic heme oxygenases and is required for acquisition of iron from heme and hemoglobin. J. Bacteriol. 179, 838-845
-
(1997)
J. Bacteriol
, vol.179
, pp. 838-845
-
-
Schmitt, M.P.1
-
13
-
-
0034461244
-
Degradation of heme in Gram-negative bacteria: The product of the hemO gene of Neisseriae is a heme oxygenase
-
Zhu, W., Wilks, A., and Stojiljkovic, I. (2000) Degradation of heme in Gram-negative bacteria: The product of the hemO gene of Neisseriae is a heme oxygenase. J. Bacteriol. 182, 6783-6790
-
(2000)
J. Bacteriol
, vol.182
, pp. 6783-6790
-
-
Zhu, W.1
Wilks, A.2
Stojiljkovic, I.3
-
14
-
-
0035688874
-
Homologues of neisserial heme oxygenase in Gram-negative bacteria: Degradation of heme by the product of the pigA gene of Pseudomonas aeruginosa
-
Ratliff, M., Zhu, W., Deshmukh, R., Wilks, A., and Stojiljkovic, I. (2001) Homologues of neisserial heme oxygenase in Gram-negative bacteria: Degradation of heme by the product of the pigA gene of Pseudomonas aeruginosa. J. Bacteriol. 183, 6394-6403
-
(2001)
J. Bacteriol
, vol.183
, pp. 6394-6403
-
-
Ratliff, M.1
Zhu, W.2
Deshmukh, R.3
Wilks, A.4
Stojiljkovic, I.5
-
15
-
-
0031984521
-
Expression and characterization of a heme oxygenase (HmuO) from Corynebacterium diphtheriae: Iron acquisition requires oxidative cleavage of the heme macrocycle
-
Wilks, A., and Schmitt, M. P. (1998) Expression and characterization of a heme oxygenase (HmuO) from Corynebacterium diphtheriae: Iron acquisition requires oxidative cleavage of the heme macrocycle. J. Biol. Chem. 273, 837-841
-
(1998)
J. Biol. Chem
, vol.273
, pp. 837-841
-
-
Wilks, A.1
Schmitt, M.P.2
-
16
-
-
0033597730
-
Heme degradation as catalyzed by a recombinant bacterial heme oxygenase (HmuO) from Corynebacterium diphtheriae
-
Chu, G. C., Katakura, K., Zhang, X., Yoshida, T., and Ikeda-Saito, M. (1999) Heme degradation as catalyzed by a recombinant bacterial heme oxygenase (HmuO) from Corynebacterium diphtheriae. J. Biol. Chem. 274, 21319-21325
-
(1999)
J. Biol. Chem
, vol.274
, pp. 21319-21325
-
-
Chu, G.C.1
Katakura, K.2
Zhang, X.3
Yoshida, T.4
Ikeda-Saito, M.5
-
17
-
-
0035949642
-
Crystal structure of heme oxygenase from the Gram-negative pathogen Neisseria meningitidis and a comparison with mammalian heme oxygenase-1
-
Schuller, D. J., Zhu, W., Stojiljkovic, I., Wilks, A., and Poulos, T. L. (2001) Crystal structure of heme oxygenase from the Gram-negative pathogen Neisseria meningitidis and a comparison with mammalian heme oxygenase-1. Biochemistry 40, 11552-11558
-
(2001)
Biochemistry
, vol.40
, pp. 11552-11558
-
-
Schuller, D.J.1
Zhu, W.2
Stojiljkovic, I.3
Wilks, A.4
Poulos, T.L.5
-
18
-
-
1642441846
-
The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae
-
Hirotsu, S., Chu, G. C., Unno, M., Lee, D.-S., Yoshida, T., Park, S.-Y., Shiro, Y., and Ikeda-Saito, M. (2004) The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae. J. Biol. Chem. 279, 11937-11947
-
(2004)
J. Biol. Chem
, vol.279
, pp. 11937-11947
-
-
Hirotsu, S.1
Chu, G.C.2
Unno, M.3
Lee, D.-S.4
Yoshida, T.5
Park, S.-Y.6
Shiro, Y.7
Ikeda-Saito, M.8
-
19
-
-
2442496416
-
Structural basis for novel δ-regioselective heme oxygenation in opportunistic pathogen Pseudomonas aeruginosa
-
Friedman, J., Lad, L., Li, H., Wilks, A., and Poulos, T. L. (2004) Structural basis for novel δ-regioselective heme oxygenation in opportunistic pathogen Pseudomonas aeruginosa. Biochemistry 43, 5239-5245
-
(2004)
Biochemistry
, vol.43
, pp. 5239-5245
-
-
Friedman, J.1
Lad, L.2
Li, H.3
Wilks, A.4
Poulos, T.L.5
-
20
-
-
0032830567
-
Crystal structure of human heme oxygenase-1
-
Schuller, D. J., Wilks, A., Ortiz de Montellano, P. R., and Poulos, T. L. (1999) Crystal structure of human heme oxygenase-1. Nat. Struct. Biol. 6, 860-867
-
(1999)
Nat. Struct. Biol
, vol.6
, pp. 860-867
-
-
Schuller, D.J.1
Wilks, A.2
Ortiz De Montellano, P.R.3
Poulos, T.L.4
-
21
-
-
0036672234
-
Heme oxygenase: Evolution, structure, and mechanism
-
Wilks, A. (2002) Heme oxygenase: Evolution, structure, and mechanism. Antioxid. Redox Signal. 4, 603-614
-
(2002)
Antioxid. Redox Signal
, vol.4
, pp. 603-614
-
-
Wilks, A.1
-
22
-
-
34249803283
-
Structure and catalytic mechanism of heme oxygenase
-
Unno, M., Matsui, T., and Ikeda-Saito, M. (2007) Structure and catalytic mechanism of heme oxygenase. Nat. Prod. Rep. 24, 553-570
-
(2007)
Nat. Prod. Rep
, vol.24
, pp. 553-570
-
-
Unno, M.1
Matsui, T.2
Ikeda-Saito, M.3
-
23
-
-
77249168703
-
Heme oxygenase reveals its strategy for catalyzing three successive oxygenation reactions
-
Matsui, T., Unno, M., and Ikeda-Saito, M. (2010) Heme oxygenase reveals its strategy for catalyzing three successive oxygenation reactions. Acc. Chem. Res. 43, 240-247
-
(2010)
Acc. Chem. Res
, vol.43
, pp. 240-247
-
-
Matsui, T.1
Unno, M.2
Ikeda-Saito, M.3
-
24
-
-
77950992025
-
Dioxygen activation for self-degradation of heme: Reaction mechanism and regulation of heme oxygenase
-
Matsui, T., Iwasaki, M., Sugiyama, R., Unno, M., and Ikeda-Saito, M. (2010) Dioxygen activation for self-degradation of heme: Reaction mechanism and regulation of heme oxygenase. Inorg. Chem. 49, 3602-3609
-
(2010)
Inorg. Chem
, vol.49
, pp. 3602-3609
-
-
Matsui, T.1
Iwasaki, M.2
Sugiyama, R.3
Unno, M.4
Ikeda-Saito, M.5
-
25
-
-
77956626980
-
Enzymatic ring-opening mechanism of verdoheme by the heme oxygenase: A combined x-ray crystallography and QM/MM study
-
Lai, W., Chen, H., Matsui, T., Omori, K., Unno, M., Ikeda-Saito, M., and Shaik, S. (2010) Enzymatic ring-opening mechanism of verdoheme by the heme oxygenase: A combined x-ray crystallography and QM/MM study. J. Am. Chem. Soc. 132, 12960-12970
-
(2010)
J. Am. Chem. Soc
, vol.132
, pp. 12960-12970
-
-
Lai, W.1
Chen, H.2
Matsui, T.3
Omori, K.4
Unno, M.5
Ikeda-Saito, M.6
Shaik, S.7
-
26
-
-
2442645409
-
Crystal structure of the dioxygen-bound heme oxygenase from Corynebacterium diphtheriae: Implications for heme oxygenase function
-
Unno, M., Matsui, T., Chu, G. C., Couture, M., Yoshida, T., Rousseau, D. L., Olson, J. S., and Ikeda-Saito, M. (2004) Crystal structure of the dioxygen-bound heme oxygenase from Corynebacterium diphtheriae: Implications for heme oxygenase function. J. Biol. Chem. 279, 21055-21061
-
(2004)
J. Biol. Chem
, vol.279
, pp. 21055-21061
-
-
Unno, M.1
Matsui, T.2
Chu, G.C.3
Couture, M.4
Yoshida, T.5
Rousseau, D.L.6
Olson, J.S.7
Ikeda-Saito, M.8
-
27
-
-
0017900548
-
Features of the reaction of heme degradation catalyzed by the reconstituted microsomal heme oxygenase system
-
Yoshida, T., and Kikuchi, G. (1978) Features of the reaction of heme degradation catalyzed by the reconstituted microsomal heme oxygenase system. J. Biol. Chem. 253, 4230-4236
-
(1978)
J. Biol. Chem
, vol.253
, pp. 4230-4236
-
-
Yoshida, T.1
Kikuchi, G.2
-
28
-
-
84863725870
-
Crystallographic studies of heme oxygenase complexed with an unstable reaction intermediate, verdoheme
-
Unno, M., Matsui, T., and Ikeda-Saito, M. (2012) Crystallographic studies of heme oxygenase complexed with an unstable reaction intermediate, verdoheme. J. Inorg. Biochem. 113, 102-109
-
(2012)
J. Inorg. Biochem
, vol.113
, pp. 102-109
-
-
Unno, M.1
Matsui, T.2
Ikeda-Saito, M.3
-
29
-
-
0037062587
-
Crystal structure of rat apo-heme oxygenase- 1 (HO-1): Mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms
-
Sugishima, M., Sakamoto, H., Kakuta, Y., Omata, Y., Hayashi, S., Noguchi, M., and Fukuyama, K. (2002) Crystal structure of rat apo-heme oxygenase- 1 (HO-1): Mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms. Biochemistry 41, 7293-7300
-
(2002)
Biochemistry
, vol.41
, pp. 7293-7300
-
-
Sugishima, M.1
Sakamoto, H.2
Kakuta, Y.3
Omata, Y.4
Hayashi, S.5
Noguchi, M.6
Fukuyama, K.7
-
30
-
-
0037424264
-
Comparison of the heme-free and -bound crystal structures of human heme oxygenase-1
-
Lad, L., Schuller, D. J., Shimizu, H., Friedman, J., Li, H., Ortiz de Montellano, P. R., and Poulos, T. L. (2003) Comparison of the heme-free and -bound crystal structures of human heme oxygenase-1. J. Biol. Chem. 278, 7834-7843
-
(2003)
J. Biol. Chem
, vol.278
, pp. 7834-7843
-
-
Lad, L.1
Schuller, D.J.2
Shimizu, H.3
Friedman, J.4
Li, H.5
Ortiz De Montellano, P.R.6
Poulos, T.L.7
-
31
-
-
1842539397
-
Crystal structure of human heme oxygenase-1 in a complex with biliverdin
-
Lad, L., Friedman, J., Li, H., Bhaskar, B., Ortiz de Montellano, P. R., and Poulos, T. L. (2004) Crystal structure of human heme oxygenase-1 in a complex with biliverdin. Biochemistry 43, 3793-3801
-
(2004)
Biochemistry
, vol.43
, pp. 3793-3801
-
-
Lad, L.1
Friedman, J.2
Li, H.3
Bhaskar, B.4
Ortiz De Montellano, P.R.5
Poulos, T.L.6
-
32
-
-
37049108250
-
Crystal and molecular structure of biliverdin dimethyl ester
-
Sheldrick, W. S. (1976) Crystal and molecular structure of biliverdin dimethyl ester. J. Chem. Soc. Perkin Trans. 2, 1453-1462
-
(1976)
J. Chem. Soc. Perkin Trans
, vol.2
, pp. 1453-1462
-
-
Sheldrick, W.S.1
-
33
-
-
0028958953
-
Structure determination of the biliverdin apomyoglobin complex: Crystal structure analysis of two crystal forms at 1.4 and 1.5 Å resolution
-
Wagner, U.G., Müller, N., Schmitzberger, W., Falk H., and Kratky, C. (1995) Structure determination of the biliverdin apomyoglobin complex: Crystal structure analysis of two crystal forms at 1.4 and 1.5 Å resolution. J. Mol. Biol. 247, 326-337
-
(1995)
J. Mol. Biol
, vol.247
, pp. 326-337
-
-
Wagner, U.G.1
Müller, N.2
Schmitzberger, W.3
Falk, H.4
Kratky, C.5
-
34
-
-
0035119623
-
Structure of human biliverdin IXβ reductase, an early fetal bilirubin IXβ producing enzyme
-
Pereira, P. J., Macedo-Ribeiro, S., Párraga, A., Pérez-Luque, R., Cunningham, O., Darcy, K., Mantle, T. J., and Coll, M. (2001) Structure of human biliverdin IXβ reductase, an early fetal bilirubin IXβ producing enzyme. Nat. Struct. Biol. 8, 215-220
-
(2001)
Nat. Struct. Biol
, vol.8
, pp. 215-220
-
-
Pereira, P.J.1
MacEdo-Ribeiro, S.2
Párraga, A.3
Pérez-Luque, R.4
Cunningham, O.5
Darcy, K.6
Mantle, T.J.7
Coll, M.8
-
35
-
-
0031059866
-
Processing of x-ray diffraction data collected in oscillation mode
-
Otwinowski, Z., and Minor, W. (1997) Processing of x-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-326
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
36
-
-
3543012707
-
Crystallography &nMRsystem: A new software suite for macromolecular structure determination
-
Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Crystallography &NMRsystem: A new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 54, 905-921
-
(1998)
Acta Crystallogr. D Biol. Crystallogr
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
37
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project No 4
-
Collaborative Computational Project No. 4 (1994) The CCP4 suite: Programs for protein crystallography. Acta Crystallogr. D Biol. Crystallogr. 50, 760-763
-
(1994)
Acta Crystallogr. D Biol. Crystallogr
, vol.50
, pp. 760-763
-
-
-
38
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones, T. A., Zou, J.-Y., Cowan, S. E., and Kjeldgaard, M. (1991) Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. Sect. A Found. Crystallogr. 47, 110-119
-
(1991)
Acta Crystallogr. Sect. A Found. Crystallogr
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.-Y.2
Cowan, S.E.3
Kjeldgaard, M.4
-
39
-
-
0000356656
-
A graphics model building and refinement system for macromolecules
-
Jones, T. A. (1978) A graphics model building and refinement system for macromolecules. J. Appl. Cryst. 11, 268-272
-
(1978)
J. Appl. Cryst
, vol.11
, pp. 268-272
-
-
Jones, T.A.1
-
40
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D Biol. Crystallogr. 53, 240-255
-
(1997)
Acta Crystallogr. D Biol. Crystallogr
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
42
-
-
0033119938
-
Further additions to MolScript version 1.4, including reading and contouring of electron-density maps
-
Esnouf, R. M. (1999) Further additions to MolScript version 1.4, including reading and contouring of electron-density maps. Acta Crystallogr.DBiol. Crystallogr. 55, 938-940
-
(1999)
Acta Crystallogr.DBiol. Crystallogr
, vol.55
, pp. 938-940
-
-
Esnouf, R.M.1
-
43
-
-
0030815133
-
Raster3D: Photorealistic molecular graphics
-
Merritt, E. A., and Bacon, D. J. (1997) Raster3D: Photorealistic molecular graphics. Methods Enzymol. 277, 505-524
-
(1997)
Methods Enzymol
, vol.277
, pp. 505-524
-
-
Merritt, E.A.1
Bacon, D.J.2
-
45
-
-
0029011701
-
A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
-
Cornell, W. D., Cieplak, P., Bayly, C. I., Gould, I. R., Merz, K. M., Ferguson, D. M., Spellmeyer, D. C., Fox, T., Caldwell, J. W., and Kollman, P. A. (1995) A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J. Am. Chem. Soc. 117, 5179-5197
-
(1995)
J. Am. Chem. Soc
, vol.117
, pp. 5179-5197
-
-
Cornell, W.D.1
Cieplak, P.2
Bayly, C.I.3
Gould, I.R.4
Merz, K.M.5
Ferguson, D.M.6
Spellmeyer, D.C.7
Fox, T.8
Caldwell, J.W.9
Kollman, P.A.10
-
46
-
-
0029633186
-
AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics, and free energy calculations to simulate the structural and energetic properties of molecules
-
Pearlman, D. A., Case, D. A., Caldwell, J. W., Ross, W. S., Cheatham, T. E., III, Debolt, S., Ferguson, D., Seibel, G., and Kollman, P. A. (1995) AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics, and free energy calculations to simulate the structural and energetic properties of molecules. Comput. Phys. Commun. 91, 1-41
-
(1995)
Comput. Phys. Commun
, vol.91
, pp. 1-41
-
-
Pearlman, D.A.1
Case, D.A.2
Caldwell, J.W.3
Ross, W.S.4
Cheatham III, T.E.5
Debolt, S.6
Ferguson, D.7
Seibel, G.8
Kollman, P.A.9
-
47
-
-
0042415783
-
NAMD2: Greater scalability for parallel molecular dynamics
-
Kalé, L., Skeel, R., Bhandarkar, M., Brunner, R., Gursoy, A., Krawetz, N., Phillips, J., Shinozaki, A., Varadarajan, K., Schulten, K. (1999) NAMD2: Greater scalability for parallel molecular dynamics. J. Comp. Phys. 151, 283-312
-
(1999)
J. Comp. Phys
, vol.151
, pp. 283-312
-
-
Kalé, L.1
Skeel, R.2
Bhandarkar, M.3
Brunner, R.4
Gursoy, A.5
Krawetz, N.6
Phillips, J.7
Shinozaki, A.8
Varadarajan, K.9
Schulten, K.10
-
48
-
-
73349098763
-
A collective variable for the efficient exploration of protein β-sheet structures: Application to SH3 and GB1
-
Pietrucci, F., and Laio, A. (2009) A collective variable for the efficient exploration of protein β-sheet structures: Application to SH3 and GB1. J. Chem. Theory Comput. 5, 2197-2201
-
(2009)
J. Chem. Theory Comput
, vol.5
, pp. 2197-2201
-
-
Pietrucci, F.1
Laio, A.2
-
49
-
-
77955659803
-
Solution 1H NMR characterization of substrate-free C. diphtheriae heme oxygenase: Pertinence for determining magnetic axes in paramagnetic substrate complexes
-
Du, Z., Unno, M., Matsui, T., Ikeda-Saito, M., and La Mar, G. N. (2010) Solution 1H NMR characterization of substrate-free C. diphtheriae heme oxygenase: Pertinence for determining magnetic axes in paramagnetic substrate complexes. J. Inorg. Biochem. 104, 1063-1070
-
(2010)
J. Inorg. Biochem
, vol.104
, pp. 1063-1070
-
-
Du, Z.1
Unno, M.2
Matsui, T.3
Ikeda-Saito, M.4
La Mar, G.N.5
-
50
-
-
50449105242
-
Use of normal modes for structural modeling of proteins: The case study of rat heme oxygenase 1
-
Maréchal, J.-D., and Perahia, D. (2008) Use of normal modes for structural modeling of proteins: The case study of rat heme oxygenase 1. Eur. Biophys. J. 37, 1157-1165
-
(2008)
Eur. Biophys. J.
, vol.37
, pp. 1157-1165
-
-
Maréchal, J.-D.1
Perahia, D.2
-
51
-
-
38049144525
-
Comparison of apo- and heme-bound crystal structures of a truncated human heme oxygenase-2
-
Bianchetti, C. M., Yi, L., Ragsdale, S. W., and Phillips, G. N., Jr. (2007) Comparison of apo- and heme-bound crystal structures of a truncated human heme oxygenase-2. J. Biol. Chem. 282, 37624-37631
-
(2007)
J. Biol. Chem
, vol.282
, pp. 37624-37631
-
-
Bianchetti, C.M.1
Yi, L.2
Ragsdale, S.W.3
Phillips Jr., G.N.4
-
52
-
-
0037470161
-
Solution 1H NMR investigation of the active site molecular and electronic structures of substrate-bound, cyanide-inhibited HmuO, a bacterial heme oxygenase from Corynebacterium diphtheriae
-
Li, Y., Syvitski, R. T., Chu, G. C., Ikeda-Saito, M., and Mar, G. N. (2003) Solution 1H NMR investigation of the active site molecular and electronic structures of substrate-bound, cyanide-inhibited HmuO, a bacterial heme oxygenase from Corynebacterium diphtheriae. J. Biol. Chem. 278, 6651- 6663
-
(2003)
J. Biol. Chem
, vol.278
, pp. 6651-6663
-
-
Li, Y.1
Syvitski, R.T.2
Chu, G.C.3
Ikeda-Saito, M.4
Mar, G.N.5
-
53
-
-
0041355223
-
Crystal structure of rat heme oxygenase-1 in complex with biliverdin-iron chelate: Conformational change of the distal helix during the heme cleavage reaction
-
Sugishima, M., Sakamoto, H., Higashimoto, Y., Noguchi, M., and Fukuyama. (2003) Crystal structure of rat heme oxygenase-1 in complex with biliverdin-iron chelate: Conformational change of the distal helix during the heme cleavage reaction. J. Biol. Chem. 278, 32352-32358
-
(2003)
J. Biol. Chem
, vol.278
, pp. 32352-32358
-
-
Sugishima, M.1
Sakamoto, H.2
Higashimoto, Y.3
Noguchi, M.4
Fukuyama5
-
54
-
-
1642555725
-
-
(Tesler, J., ed) American Chemical Society, Washington, D. C.
-
Ikeda-Saito, M., and Fujii, H. (2003) in Paramagnetic Resonance of Metallobiomolecules (Tesler, J., ed) Vol. 858, pp. 97-112, American Chemical Society, Washington, D. C.
-
(2003)
Paramagnetic Resonance of Metallobiomolecules
, vol.858
, pp. 97-112
-
-
Ikeda-Saito, M.1
Fujii, H.2
-
55
-
-
4043105583
-
Structures of human cytosolic NADP-dependent isocitrate dehydrogenase reveal a novel self-regulatory mechanism of activity
-
Xu, X., Zhao, J., Xu, Z., Peng, B., Huang, Q., Arnold, E., and Ding, J. (2004) Structures of human cytosolic NADP-dependent isocitrate dehydrogenase reveal a novel self-regulatory mechanism of activity. J. Biol. Chem. 279, 33946-33957
-
(2004)
J. Biol. Chem
, vol.279
, pp. 33946-33957
-
-
Xu, X.1
Zhao, J.2
Xu, Z.3
Peng, B.4
Huang, Q.5
Arnold, E.6
Ding, J.7
-
56
-
-
84865766450
-
Structural basis for the transcriptional regulation of heme homeostasis in Lactococcus lactis
-
Sawai, H., Yamanaka, M., Sugimoto, H., Shiro, Y., and Aono, S. (2012) Structural basis for the transcriptional regulation of heme homeostasis in Lactococcus lactis. J. Biol. Chem. 287, 30755-30768
-
(2012)
J. Biol. Chem
, vol.287
, pp. 30755-30768
-
-
Sawai, H.1
Yamanaka, M.2
Sugimoto, H.3
Shiro, Y.4
Aono, S.5
-
57
-
-
0034128270
-
Corynebacterium diphtheriae genes required for acquisition of iron from haemin and haemoglobin are homologous to ABC haemin transporters
-
Drazek, E. S., Hammack, C. A., and Schmitt, M. P. (2000) Corynebacterium diphtheriae genes required for acquisition of iron from haemin and haemoglobin are homologous to ABC haemin transporters. Mol. Microbiol. 36, 68-84
-
(2000)
Mol. Microbiol
, vol.36
, pp. 68-84
-
-
Drazek, E.S.1
Hammack, C.A.2
Schmitt, M.P.3
-
58
-
-
65249145115
-
HtaA is an iron-regulated hemin binding protein involved in the utilization of heme iron in Corynebacterium diphtheriae
-
Allen, C. E., and Schmitt, M. P. (2009) HtaA is an iron-regulated hemin binding protein involved in the utilization of heme iron in Corynebacterium diphtheriae. J. Bacteriol. 191, 2638-2648
-
(2009)
J. Bacteriol
, vol.191
, pp. 2638-2648
-
-
Allen, C.E.1
Schmitt, M.P.2
-
59
-
-
33749010088
-
The mechanism of heme transfer from the cytoplasmic heme binding protein PhuS to the δ-regioselective heme oxygenase of Pseudomonas aeruginosa
-
Bhakta, M. N., and Wilks, A. (2006) The mechanism of heme transfer from the cytoplasmic heme binding protein PhuS to the δ-regioselective heme oxygenase of Pseudomonas aeruginosa. Biochemistry 45, 11642-11649
-
(2006)
Biochemistry
, vol.45
, pp. 11642-11649
-
-
Bhakta, M.N.1
Wilks, A.2
-
60
-
-
84861556687
-
Metabolic flux of extracellular heme uptake in Pseudomonas aeruginosa is driven by the ironregulated heme oxygenase (HemO)
-
Barker, K. D., Barkovits, K., and Wilks, A. (2012) Metabolic flux of extracellular heme uptake in Pseudomonas aeruginosa is driven by the ironregulated heme oxygenase (HemO). J. Biol. Chem. 287, 18342-18350
-
(2012)
J. Biol. Chem
, vol.287
, pp. 18342-18350
-
-
Barker, K.D.1
Barkovits, K.2
Wilks, A.3
-
61
-
-
33846050557
-
Cryoradiolytic reduction of crystalline heme proteins: Analysis by UV-Vis spectroscopy and x-ray crystallography
-
Beitlich, T., Kühnel, K., Schulze-Briese, C., Shoeman, R. L., and Schlichting, I. (2007) Cryoradiolytic reduction of crystalline heme proteins: Analysis by UV-Vis spectroscopy and x-ray crystallography. J. Synchrotron Radiat. 14, 11-23
-
(2007)
J. Synchrotron Radiat
, vol.14
, pp. 11-23
-
-
Beitlich, T.1
Kühnel, K.2
Schulze-Briese, C.3
Shoeman, R.L.4
Schlichting, I.5
-
62
-
-
0040141555
-
Reaction intermediates and single turnover rate constants for the oxidation of heme by human heme oxygenase-1
-
Liu, Y., and Ortiz de Montellano, P. R. (2000) Reaction intermediates and single turnover rate constants for the oxidation of heme by human heme oxygenase-1. J. Biol. Chem. 275, 5297-5307
-
(2000)
J. Biol. Chem
, vol.275
, pp. 5297-5307
-
-
Liu, Y.1
Ortiz De Montellano, P.R.2
-
63
-
-
0038165531
-
The binding sites on human heme oxygenase-1 for cytochrome P450 reductase and biliverdin reductase
-
Wang, J., and de Montellano, P. R. (2003) The binding sites on human heme oxygenase-1 for cytochrome P450 reductase and biliverdin reductase. J. Biol. Chem. 278, 20069-20076
-
(2003)
J. Biol. Chem
, vol.278
, pp. 20069-20076
-
-
Wang, J.1
De Montellano, P.R.2
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