Comparison of the heme-free and -bound crystal structures of human heme oxygenase-1

Journal of Biological Chemistry

Volumn 278, Issue 10, 2003, Pages 7834-7843

  Lad, Latesh ^a   Schuller, David J ^b   Shimizu, Hideaki ^a,d   Friedman, Jonathan ^a   Li, Huiying ^a   Ortiz de Montellano, Paul R ^c   Poulos, Thomas L ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Department of Obstetrics Gynecology   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d RIKEN BRAIN SCIENCE INSTITUTE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CATALYSIS; CRYSTAL STRUCTURE; DEGRADATION; SUBSTRATES;

SUBSTRATE BINDING;

ENZYMES;

APOENZYME; BILIVERDIN; GLYCINE; HEME; HEME OXYGENASE 1; SOLVENT; HEME OXYGENASE; HMOX1 PROTEIN, HUMAN; MEMBRANE PROTEIN;

ARTICLE; CATALYSIS; CRYSTAL STRUCTURE; ENZYME ACTIVE SITE; ENZYME CONFORMATION; ENZYME STABILITY; ENZYME SUBSTRATE COMPLEX; HYDROGEN BOND; NONHUMAN; PRIORITY JOURNAL; STRUCTURE ANALYSIS; CHEMICAL STRUCTURE; CHEMISTRY; COMPARATIVE STUDY; HUMAN; METABOLISM; PROTEIN CONFORMATION; X RAY CRYSTALLOGRAPHY;

CRYSTALLOGRAPHY, X-RAY; HEME; HEME OXYGENASE (DECYCLIZING); HEME OXYGENASE-1; HUMANS; MEMBRANE PROTEINS; MODELS, MOLECULAR; PROTEIN CONFORMATION;

EID: 0037424264     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M211450200     Document Type: Article

References (46)

1. Maines, M. D. (1992) Heme Oxygenase: Clinical Applications and Functions, pp. 203-266, CRC Press, Inc., Boca Raton, FL
2. Schmid, R., and McDonagh, A. F. (1979) in The Porphyrins (Dolphin, D., ed) Vol. VI, pp. 257-292, Academic Press, Inc., New York
3. Hyman, C. B., Keaster, J., and Hanson, V. (1969) Am. J. Dis. Child. 117, 395-405
4. Verma, A., Hirsch, D. L., Glatt, C. E., Ronnett, G. V., and Snyder, S. H. (1993) Science 259, 381-384
5. Maines, M. D. (1997) Annu. Rev. Pharmacol. Toxicol. 37, 517-554
6. Ryter, S. W., and Tyrrell, R. M. (2000) Free Radic. Biol. Med. 28, 289-309
7. Suttner, D. M., and Dennery, P. A. (1999) FASEB J. 13, 1800-1809
8. Maines, M. D., Trakshel, G. M., and Kutty, R. K. (1986) J. Biol. Chem. 261, 411-419
9. Shibahara, S., Muller, R., Taguchi, H., and Yoshida, T. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 7865-7869
10. Rotenberg, M. O., and Maines, M. D. (1990) J. Biol. Chem. 265, 7501-7506
11. McCoubrey, W. K., Huang, T. J., and Maines, M. D. (1997) Eur. J. Biochem. 247, 725-732
12. Wilks, A., Black, S. M., Miller, W. L., and Ortiz de Montellano, P. R. (1995) Biochemistry 34, 4421-4427
13. Wilks, A., and Ortiz de Montellano, P. R. (1993) J. Biol. Chem. 268, 22357-22362
14. Ortiz de Montellano, P. R. (1995) in Cytochrome P450: Structure, Mechanism, and Biochemistry (Ortiz de Montellano, P. R., ed) 2nd Ed., pp. 125-150, Plenum Press, New York
15. Ortiz de Montellano, P. R. (1998) Acc. Chem. Res. 31, 543-549
16. Wilks, A., Torpey, J., and Ortiz de Montellano, P. R. (1994) J. Biol. Chem. 269, 29553-29556
17. Liu, Y., and Ortiz de Montellano, P. R. (2000) J. Biol. Chem. 275, 5297-5307
18. Schacter, B., Nelson, E. B., Marver, H. S., and Masters, B. S. S. (1972) J. Biol. Chem. 247, 3601-3607
19. Beale, S. I. (1993) Chem. Rev. 93, 785-802
20. Wilks, A., and Schmitt, M. P. (1998) J. Biol. Chem. 273, 837-841
21. Schuller, D. J., Wilks, A., Ortiz de Montellano, P. R., and Poulos, T. L. (1999) Nat. Struct. Biol. 6, 860-867
22. Sugishima, M., Omato, Y., Kakuta, Y., Sakamoto, H., Noguchi, M., and Fukuyama, K. (2000) FEBS Lett. 471, 61-66
23. Schuller, D. J., Zhu, W., Stojiljkovic, I., Wilks, A., and Poulos, T. L. (2001) Biochemistry 40, 11552-11558
24. Sugishima, M., Sakamoto, H., Kakuta, Y., Omato, Y., Hayashi, H., Noguchi, M., and Fukuyama, K. (2002) Biochemistry 41, 7293-7300
25. Schuller, D. J., Wilks, A., Ortiz de Montellano, P. R., and Poulos, T. L. (1998) Protein Sci. 7, 1836-1838
26. Leslie, A. W. G. (1992) Joint CCP 4 + ESF-EAMCB Newsl. Protein Crystal. logr., No. 26
27. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
28. Vagin, A., and Teplyakov, A. (1997) J. Appl. Crystallogr. 30, 1022-1025
29. Brunger, A. T., Adams, P. D., Clore, G. M., Delano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, N., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Acta Crystallogr. Sect. D Biol. Crystallogr. 53, 905-921
30. Jones, T. A., Zou, J. Y., Cowan, S. E., and Kieldgaard, M. (1991) Acta Crystallogr. Sect. A 47, 110-119
31. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallog. 26, 283-291
32. Sheldrick, G. M., and Schneider, T. R. (1997) Methods Enzymol. 277, 319-343
33. Cambillau, C., and Harjales, E. (1987) J. Mol. Graph. 5, 174-177
34. McRee, D. E. (1992) J. Mol. Graph. 10, 44-46
35. Navanza, J., and Saludjian, P. (1997) Methods Enzymol. 276, 472-494
36. Kissinger, C. R., Gehlhaar, D. K., and Fogel, D. B. (1999) Acta Crystallogr. Sect. D Biol. Crystallogr. 55, 484-491
37. Read, R. J. (2001) Acta Crystallogr. Sect. D Biol. Crystallogr 57, 1373-1382
38. Fujii, H., Zhang, X., Tomita, T., Ikeda-Saito, M., and Yoshida, T. (2001) J. Am. Chem. Soc. 123, 6475-6484
39. Lightning, L. K., Huang, H., Moenne-Loccoz, P., Loehr, T. M., Schuller, D. J., Poulos, T. L., and Ortiz de Montellano, P. R. (2001) J. Biol. Chem. 276, 10612-10619
40. La Mar, G. N., Asokan, A., Espiritu, B., Yeh, D. C., Auclair, K., and Ortiz de Montellano, P. R. (2001) J. Biol. Chem. 276, 15676-15687
41. Zhou, H., Migita, C. T., Sato, M., Sun, D. Y., Zhang, X. H., Ikeda-Saito, M., Fujii, H., and Yoshida, T. (2000) J. Am. Chem. Soc. 122, 8311-8312
42. Dunford, H. B. (1991) in Peroxidases in Chemistry and Biology (Everse, J., Everse, K. E., and Grisham, M. B., eds) pp. 1-24, CRC Press, Inc., Boca Raton, FL
43. Dunford, H. B. (ed) (1999) Heme Peroxidases, Wiley-VCH, New York
44. Nagano, S., Tanaka, M., Watanabe, Y., and Morishima, I. (1995) Biochem. Biophys. Res. Commun. 207, 417-423
45. Nagano, S., Tanaka, M., Ishimori, K., Watanabe, Y., and Morishima, I. (1996) Biochemistry 35, 14251-14258
46. Poulos, T. L., and Kraut, J. (1980) J. Biol. Chem. 255, 8199-8205