메뉴 건너뛰기




Volumn 8, Issue 15, 2013, Pages 1-32

Diversity and molecular determination of wild yeasts in a central Washington State vineyard

Author keywords

Aureobasidium; Biodiversity; Candida; Cryptococcus; Curvibasidium; Cystofilobasidium; D1 D2; Fungi; Grape; Hannaella; Hanseniaspora; Holtermanniella; ITS; Metschnikowia; Meyerozyma; Molecular determination; Mrakiella; Phaeococcomyces; Phylogeny; Pichia; Pseudozyma; rDNA; Rhodosporidium; Rhodotorula; Sporidiobolus; Sydowia; Systematics; Vitis; Wickerhamomyces; Yamadazyma; Yeast

Indexed keywords


EID: 84888796871     PISSN: None     EISSN: 1937786X     Source Type: Journal    
DOI: 10.2509/naf2013.008.015     Document Type: Article
Times cited : (27)

References (94)
  • 1
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike, H. 1974. A new look at the statistical model identification. IEEE Transactions on Automatic Control 19:716-723. http://dx.doi.org/10.1109/TAC.1974.1100705.
    • (1974) IEEE Transactions on Automatic Control , vol.19 , pp. 716-723
    • Akaike, H.1
  • 2
    • 1342309210 scopus 로고    scopus 로고
    • Parallel Metropolis-coupled Markov chain Monte Carlo for Bayesian phylogenetic inference
    • Altekar G., Dwarkadas S., Huelsenbeck J.P. and Ronquist, F. 2004. Parallel Metropolis-coupled Markov chain Monte Carlo for Bayesian phylogenetic inference. Bioinformatics 20:407-415. http://dx.doi.org/10.1093/bioinformatics/btg427.
    • (2004) Bioinformatics , vol.20 , pp. 407-415
    • Altekar, G.1    Dwarkadas, S.2    Huelsenbeck, J.P.3    Ronquist, F.4
  • 5
    • 0000256562 scopus 로고    scopus 로고
    • Comparison of AFLP fingerprints and ITS sequences as phylogenetic markers in Ustilaginomycetes
    • Bakkeren G., Kronstad J.W. and L vesque C.A. 2000. Comparison of AFLP fingerprints and ITS sequences as phylogenetic markers in Ustilaginomycetes. Mycologia 92:510-521.
    • (2000) Mycologia , vol.92 , pp. 510-521
    • Bakkeren, G.1    Kronstad, J.W.2    Lvesque, C.A.3
  • 8
    • 0033923514 scopus 로고    scopus 로고
    • Phylogenetic placements of ustilaginomycetous anamorphs as deduced from nuclear LSU rDNA sequences Part 174 of the series "Studies in Heterobasidiomycetes"
    • Begerow D., Bauer R. and Boekhout T. 2000. Phylogenetic placements of ustilaginomycetous anamorphs as deduced from nuclear LSU rDNA sequences. Part 174 of the series "Studies in Heterobasidiomycetes". Mycological Research 104:53-60. http://dx.doi.org/10.1017/S0953756299001161.
    • (2000) Mycological Research , vol.104 , pp. 53-60
    • Begerow, D.1    Bauer, R.2    Boekhout, T.3
  • 9
    • 1842713088 scopus 로고    scopus 로고
    • The Biotechnology of Wine Yeast
    • Bisson L.F. 2004. The Biotechnology of Wine Yeast. Food Biotechnology 18:63-96. http://dx.doi.org/10.1081/FBT-120030385.
    • (2004) Food Biotechnology , vol.18 , pp. 63-96
    • Bisson, L.F.1
  • 10
    • 84884875682 scopus 로고    scopus 로고
    • Boekhout (1985) and a comparison with the yeast state of Ustilago maydis (De Candolle). In: Kurtzman CP, Fell JW, Boekhout T, eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Boekhout T. 2011. Pseudozyma Bandoni emend. Boekhout (1985) and a comparison with the yeast state of Ustilago maydis (De Candolle). In: Kurtzman CP, Fell JW, Boekhout T, eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 1857-1868. http://dx.doi.org/10.1016/B978-0-444-52149-1.00153-1.
    • (2011) Pseudozyma Bandoni emend , pp. 1857-1868
    • Boekhout, T.1
  • 13
    • 84888783198 scopus 로고    scopus 로고
    • Curvibasidium rogersii, a new yeast species in the Microbotryomycetes
    • Bourret T.B., Glawe D.A., Edwards C.G. and Henick-Kling T. 2012. Curvibasidium rogersii, a new yeast species in the Microbotryomycetes. North American Fungi 7:1-8. http://dx.doi:10.2509/naf2012.007.012.
    • (2012) North American Fungi , vol.7 , pp. 1-8
    • Bourret, T.B.1    Glawe, D.A.2    Edwards, C.G.3    Henick-Kling, T.4
  • 14
    • 77951972765 scopus 로고    scopus 로고
    • Yeast and yeast-like diversity in the southernmost glacier of Europe (Calderone Glacier, Apennines, Italy)
    • Branda E., Turchetti B., Buzzini P., Diolaiuti G., Smiraglia C. and Pecci M. 2010. Yeast and yeast-like diversity in the southernmost glacier of Europe (Calderone Glacier, Apennines, Italy). FEMS Microbiology Ecology 72:354-369. http://dx.doi.org/10.1111/j.1574-6941.2010.00864.x.
    • (2010) FEMS Microbiology Ecology , vol.72 , pp. 354-369
    • Branda, E.1    Turchetti, B.2    Buzzini, P.3    Diolaiuti, G.4    Smiraglia, C.5    Pecci, M.6
  • 16
    • 77953192781 scopus 로고    scopus 로고
    • Marine culturable yeasts in deep-sea hydrothermal vents: Species richness and association with fauna
    • Burgaud G., Arzur D., Durand L., Cambon-Bonavita M.-A. and Barbier G. 2010. Marine culturable yeasts in deep-sea hydrothermal vents: Species richness and association with fauna. FEMS Microbiology Ecology 73:121-133. http://dx.doi.org/10.1111/j.1574-6941.2010.00881.x.
    • (2010) FEMS Microbiology Ecology , vol.73 , pp. 121-133
    • Burgaud, G.1    Arzur, D.2    Durand, L.3    Cambon-Bonavita, M.-A.4    Barbier, G.5
  • 17
    • 77954479396 scopus 로고    scopus 로고
    • The effect of fungicides on yeast communities associated with grape berries
    • Cadez N., Zupan J. and Raspor P. 2010. The effect of fungicides on yeast communities associated with grape berries. FEMS Yeast Research 10:619-630. http://dx.doi.org/10.1111/j.1567-1364.2010.00635.x.
    • (2010) FEMS Yeast Research , vol.10 , pp. 619-630
    • Cadez, N.1    Zupan, J.2    Raspor, P.3
  • 19
    • 79952008640 scopus 로고    scopus 로고
    • Non-Saccharomyces wine yeasts have a promising role in biotechnological approaches to winemaking
    • Ciani M. and Comitini F. 2011. Non-Saccharomyces wine yeasts have a promising role in biotechnological approaches to winemaking. Annals of Microbiology 61:25-32. http://dx.doi.org/10.1007/s13213-010-0069-5.
    • (2011) Annals of Microbiology , vol.61 , pp. 25-32
    • Ciani, M.1    Comitini, F.2
  • 20
    • 80052141955 scopus 로고    scopus 로고
    • Evidence for maintenance of sex determinants but not of sexual stages in red yeasts, a group of early diverged basidiomycetes
    • Coelho M.A., Gonc alves P. and Sampaio JP. 2011. Evidence for maintenance of sex determinants but not of sexual stages in red yeasts, a group of early diverged basidiomycetes. BMC Evolutionary Biology 11:249. http://dx.doi.org/10.1186/1471-2148-11-249.
    • (2011) BMC Evolutionary Biology , vol.11 , pp. 249
    • Coelho, M.A.1    Gonc alves, P.2    Sampaio, J.P.3
  • 24
    • 0036227045 scopus 로고    scopus 로고
    • Recognition of the basidiomycetous yeast Sporobolomyces ruberrimus sp nov. as a distinct species based on molecular and morphological analyses
    • Fell J.W., Scorzetti G., Statzell-Tallman A., Pinel N. and Yarrow D. 2002. Recognition of the basidiomycetous yeast Sporobolomyces ruberrimus sp. nov. as a distinct species based on molecular and morphological analyses. FEMS Yeast Research 1:265-270. http://dx.doi.org/10.1111/j.1567-1364.2002.tb00044.x.
    • (2002) FEMS Yeast Research , vol.1 , pp. 265-270
    • Fell, J.W.1    Scorzetti, G.2    Statzell-Tallman, A.3    Pinel, N.4    Yarrow, D.5
  • 25
    • 84857912219 scopus 로고    scopus 로고
    • Yeast and yeast-like fungi associated with dry indehiscent fruits of Nothofagus nervosa in Patagonia, Argentina
    • Fernandez N.V., Cecilia M.M., Fontenla S.B. and Marchelli P. 2012. Yeast and yeast-like fungi associated with dry indehiscent fruits of Nothofagus nervosa in Patagonia, Argentina. FEMS Microbiology Ecology 80:179-192. http://dx.doi.org/10.1111/j.1574-6941.2011.01287.x.
    • (2012) FEMS Microbiology Ecology , vol.80 , pp. 179-192
    • Fernandez, N.V.1    Cecilia, M.M.2    Fontenla, S.B.3    Marchelli, P.4
  • 26
    • 84884822368 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Fonseca Á., Boekhout T., Fell J.W. 2011. Cryptococcus Vuillemin (1901). In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 1661-1737. http://dx.doi.org/10.1016/B978-0-444-52149-1.00138-5.
    • (2011) Cryptococcus Vuillemin (1901) , pp. 1661-1737
    • Fonseca, A.1    Boekhout, T.2    Fell, J.W.3
  • 27
    • 77951204032 scopus 로고    scopus 로고
    • Indigenous yeast communities in the environment of "Rovello bianco" grape variety and their use in commercial white wine fermentation
    • Francesca N., Settanni L., Moschetti G., Chiurazzi M., Romano R., Aponte M. 2010. Indigenous yeast communities in the environment of "Rovello bianco" grape variety and their use in commercial white wine fermentation. World Journal of Microbiology and Biotechnology 26:337-351. http://dx.doi.org/10.1007/s11274-009-0181-5.
    • (2010) World Journal of Microbiology and Biotechnology , vol.26 , pp. 337-351
    • Francesca, N.1    Settanni, L.2    Moschetti, G.3    Chiurazzi, M.4    Romano, R.5    Aponte, M.6
  • 28
    • 33646550502 scopus 로고    scopus 로고
    • Yeast diversity sampling on the San Juan Islands reveals no evidence for the spread of the Vancouver Island Cryptococcus gattii outbreak to this locale
    • Fraser JA, Lim SMC, Diezmann S, Wenink EC, Arndt CG, Cox GM, Dietrich FS, Heitman J. 2006. Yeast diversity sampling on the San Juan Islands reveals no evidence for the spread of the Vancouver Island Cryptococcus gattii outbreak to this locale. FEMS Yeast Research 6:620-624. http://dx.doi.org/10.1111/j.1567-1364.2006.00075.x.
    • (2006) FEMS Yeast Research , vol.6 , pp. 620-624
    • Fraser, J.A.1    Lim, S.M.C.2    Diezmann, S.3    Wenink, E.C.4    Arndt, C.G.5    Cox, G.M.6    Dietrich, F.S.7    Heitman, J.8
  • 29
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts
    • Gardes M. and Bruns T.D. 1993. ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Molecular Ecology 2:113-118. http://dx.doi.org/10.1111/j.1365-294X.1993.tb00005.x.
    • (1993) Molecular Ecology , vol.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 30
    • 78650679957 scopus 로고    scopus 로고
    • Occurrence and Identification of Yeast Species in Fermented Liquid Feed for Piglets
    • Gori K., Kryger B.M., Canibe N., Øyan P.A. and Jespersen L. 2011. Occurrence and Identification of Yeast Species in Fermented Liquid Feed for Piglets. Microbial Ecology 61:146-153. http://dx.doi.org/10.1007/s00248-010-9706-6.
    • (2011) Microbial Ecology , vol.61 , pp. 146-153
    • Gori, K.1    Kryger, B.M.2    Canibe, N.3    Øyan, P.A.4    Jespersen, L.5
  • 33
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S and Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 52:696-704. http://dx.doi.org/10.1080/10635150390235520.
    • (2003) Systematic Biology , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 34
    • 84862684049 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Hamamoto M., Boekhout T. and Nakase T. 2011. Sporobolomyces Kluyver & van Niel (1924). In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 1929-1990. http://dx.doi.org/10.1016/B978-0-444-52149-1.00156-7.
    • (2011) Sporobolomyces Kluyver & van Niel (1924) , pp. 1929-1990
    • Hamamoto, M.1    Boekhout, T.2    Nakase, T.3
  • 35
    • 84863766378 scopus 로고    scopus 로고
    • Associations of yeasts with spotted-wing Drosophila (Drosophila suzukii; Diptera: Drosophilidae) in cherries and raspberries
    • Hamby K.A., Hern ndez A., Boundy-Mills K. and Zalom F.G. 2012. Associations of yeasts with spotted-wing Drosophila (Drosophila suzukii; Diptera: Drosophilidae) in cherries and raspberries. Applied and Environmental Microbiology 78:4869-73. http://dx.doi.org/10.1128/AEM.00841-12.
    • (2012) Applied and Environmental Microbiology , vol.78 , pp. 4869-4873
    • Hamby, K.A.1    Hern ndez, A.2    Boundy-Mills, K.3    Zalom, F.G.4
  • 36
    • 51249177143 scopus 로고
    • Direct ribosomal RNA sequencing: Optimization of extraction and sequencing methods for work with higher plants
    • Hamby R.K., Sims L., Issel L. and Zimmer E. 1988. Direct ribosomal RNA sequencing: Optimization of extraction and sequencing methods for work with higher plants. Plant Molecular Biology Reporter, 6:175-192. http://dx.doi.org/10.1007/BF02669591.
    • (1988) Plant Molecular Biology Reporter , vol.6 , pp. 175-192
    • Hamby, R.K.1    Sims, L.2    Issel, L.3    Zimmer, E.4
  • 37
    • 34250341823 scopus 로고    scopus 로고
    • A higher-level phylogenetic classification of the Fungi
    • Hibbett D.S., Binder M., Bischoff J.F. et al. 2007. A higher-level phylogenetic classification of the Fungi. Mycological Research 122:509-547. http://dx.doi.org/10.1016/j.mycres.2007.03.004.
    • (2007) Mycological Research , vol.122 , pp. 509-547
    • Hibbett, D.S.1    Binder, M.2    Bischoff, J.F.3
  • 38
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P. and Ronquist F. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755. http://dx.doi.org/10.1093/bioinformatics/17.8.754.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 39
    • 16244410070 scopus 로고    scopus 로고
    • The occurrence of non-Saccharomyces cerevisiae yeast species over three vintages in four vineyards and grape musts from four production regions of the Western Cape, South Africa
    • Jolly N.P., Augustyn O.P.H. and Pretorius I.S. 2003. The occurrence of non-Saccharomyces cerevisiae yeast species over three vintages in four vineyards and grape musts from four production regions of the Western Cape, South Africa. South African Journal of Enology and Viticulture 24:35-42.
    • (2003) South African Journal of Enology and Viticulture , vol.24 , pp. 35-42
    • Jolly, N.P.1    Augustyn, O.P.H.2    Pretorius, I.S.3
  • 41
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16:111-120. http://dx.doi.org/10.1007/BF01731581.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 42
    • 84884893949 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Kurtzman, C.P. 2011. Discussion of Teleomorphic and Anamorphic Ascomycetous Yeasts and Yeast-like Taxa. In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 293-307. http://dx.doi.org/10.1016/B978-0-444-52149-1.00013-6.
    • (2011) Discussion of Teleomorphic and Anamorphic Ascomycetous Yeasts and Yeast-like Taxa , pp. 293-307
    • Kurtzman, C.P.1
  • 43
    • 0035684840 scopus 로고    scopus 로고
    • Metschnikowia fructicola, a new ascosporic yeast with potential for biocontrol of postharvest fruit rots
    • Kurtzman, C.P. and Droby S. 2001. Metschnikowia fructicola, a new ascosporic yeast with potential for biocontrol of postharvest fruit rots. Systematic and Applied Microbiology 24:395-399. http://dx.doi.org/10.1078/0723-2020-00045.
    • (2001) Systematic and Applied Microbiology , vol.24 , pp. 395-399
    • Kurtzman, C.P.1    Droby, S.2
  • 44
    • 0031792246 scopus 로고    scopus 로고
    • Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences
    • Kurtzman, C.P. and Robnett C.J. 1998. Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie Van Leeuwenhoek 73:331-371. http://dx.doi.org/10.1023/A:1001761008817.
    • (1998) Antonie Van Leeuwenhoek , vol.73 , pp. 331-371
    • Kurtzman, C.P.1    Robnett, C.J.2
  • 46
    • 84884867760 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. xiii
    • Kurtzman C.P., Fell J.W. and Boekhout T. 2011b. Preface. In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. xiii. http://dx.doi.org/10.1016/B978-0-444-52149-1.00180-4.
    • (2011) Preface
    • Kurtzman, C.P.1    Fell, J.W.2    Boekhout, T.3
  • 47
    • 84884867971 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Kurtzman C.P., Fell J.W. and Boekhout T. 2011c. Definition, Classification and Nomenclature of the Yeasts. In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 3-5. http://dx.doi.org/10.1016/B978-0-444-52149-1.00001-X.
    • (2011) Definition, Classification and Nomenclature of the Yeasts , pp. 3-5
    • Kurtzman, C.P.1    Fell, J.W.2    Boekhout, T.3
  • 50
    • 84884899441 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Lachance M-A. 2011. Metschnikowia Kamienski (1899). In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 575-620. http://dx.doi.org/10.1016/B978-0-444-52149-1.00046-X.
    • (2011) Metschnikowia Kamienski (1899) , pp. 575-620
    • Lachance, M.-A.1
  • 53
    • 78149412475 scopus 로고    scopus 로고
    • Candida asiatica sp nov., an anamorphic ascomycetous yeast species isolated from natural samples from Thailand, Taiwan, and Japan
    • Limtong S., Kaewwichian R., Am-In S., Yongmanitchai W., Nakase T. and Lee C.-F. 2010. Candida asiatica sp. nov., an anamorphic ascomycetous yeast species isolated from natural samples from Thailand, Taiwan, and Japan. Antonie Van Leeuwenhoek 98:475-481. http://dx.doi.org/10.1007/s10482-010-9463-z.
    • (2010) Antonie Van Leeuwenhoek , vol.98 , pp. 475-481
    • Limtong, S.1    Kaewwichian, R.2    Am-In, S.3    Yongmanitchai, W.4    Nakase, T.5    Lee, C.-F.6
  • 58
    • 25144481417 scopus 로고    scopus 로고
    • Analysis of yeast isolates related to Metschnikowia pulcherrima using the partial sequences of the large subunit rDNA and the actin gene; description of Metschnikowia andauensis sp nov
    • Moln r. and Prillinger H. 2005. Analysis of yeast isolates related to Metschnikowia pulcherrima using the partial sequences of the large subunit rDNA and the actin gene; description of Metschnikowia andauensis sp. nov. Systematic and Applied Microbiology 28:717-726. http://dx.doi.org/10.1016/j.syapm.2005.05.009.
    • (2005) Systematic and Applied Microbiology , vol.28 , pp. 717-726
    • Moln, R.1    Prillinger, H.2
  • 59
    • 0034350421 scopus 로고    scopus 로고
    • Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA Sequences
    • Moncalvo J.-M., Lutzoni F., Rehner S., Johnson J. and Vilgalys R. 2000. Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA Sequences. Systematic Biology 49:278-305. http://dx.doi.org/10.1093/sysbio/49.2.278.
    • (2000) Systematic Biology , vol.49 , pp. 278-305
    • Moncalvo, J.-M.1    Lutzoni, F.2    Rehner, S.3    Johnson, J.4    Vilgalys, R.5
  • 60
    • 35948971067 scopus 로고    scopus 로고
    • Yeast community structures and dynamics in healthy and Botrytis-affected grape must fermentations
    • Nisiotou A.A., Spiropoulos A.E. and Nychas G.J. 2007. Yeast community structures and dynamics in healthy and Botrytis-affected grape must fermentations. Applied and Environmental Microbiology 73:6705-6713. http://dx.doi.org/10.1128/AEM.01279-07.
    • (2007) Applied and Environmental Microbiology , vol.73 , pp. 6705-6713
    • Nisiotou, A.A.1    Spiropoulos, A.E.2    Nychas, G.J.3
  • 61
    • 0034623005 scopus 로고    scopus 로고
    • T-Coffee: A novel method for multiple sequence alignments
    • Notredame C., Higgins D.G. and Heringa J. 2000. T-Coffee: A novel method for multiple sequence alignments. Journal of Molecular Biology 302:205-17. http://dx.doi.org/10.1006/jmbi.2000.4042.
    • (2000) Journal of Molecular Biology , vol.302 , pp. 205-217
    • Notredame, C.1    Higgins, D.G.2    Heringa, J.3
  • 62
    • 45849154165 scopus 로고    scopus 로고
    • jModelTest: Phylogenetic Model Averaging
    • Posada D. 2008. jModelTest: Phylogenetic Model Averaging. Molecular Biology and Evolution 25:1253-1256. http://dx.doi.org/10.1093/molbev/msn083.
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 1253-1256
    • Posada, D.1
  • 63
    • 68049133064 scopus 로고    scopus 로고
    • In Posada D., ed. Bioinformatics for DNA sequence analysis. New York: Humana Press
    • Posada D. 2009. Selection of Models of DNA Evolution with jModelTest. In Posada D., ed. Bioinformatics for DNA sequence analysis. New York: Humana Press pp. 93-112. http://dx.doi.org/10.1007/978-1-59745-251-9-5.
    • (2009) Selection of Models of DNA Evolution with jModelTest , pp. 93-112
    • Posada, D.1
  • 64
    • 33746767111 scopus 로고    scopus 로고
    • Yeasts isolated from three varieties of grapes cultivated in different locations of the Dolenjska vine-growing region, Slovenia
    • Raspor P., Milek D.M., Polanc J., Mozina S.S. and Cadez N. 2006. Yeasts isolated from three varieties of grapes cultivated in different locations of the Dolenjska vine-growing region, Slovenia. International Journal of Food Microbiology 109:97-102. http://dx.doi.org/10.1016/j.ijfoodmicro.2010.01.009.
    • (2006) International Journal of Food Microbiology , vol.109 , pp. 97-102
    • Raspor, P.1    Milek, D.M.2    Polanc, J.3    Mozina, S.S.4    Cadez, N.5
  • 65
    • 28844498372 scopus 로고    scopus 로고
    • Understanding the microbial ecosystem on the grape berry surface through numeration and identification of yeast and bacteria
    • Renouf V., Claisse O. and Lonvaud-Funel A. 2005. Understanding the microbial ecosystem on the grape berry surface through numeration and identification of yeast and bacteria. Australian Journal of Grape Wine Research 11:316-327. http://dx.doi.org/10.1111/j.1755-0238.2005.tb00031.x.
    • (2005) Australian Journal of Grape Wine Research , vol.11 , pp. 316-327
    • Renouf, V.1    Claisse, O.2    Lonvaud-Funel, A.3
  • 66
    • 56649095926 scopus 로고    scopus 로고
    • Analysis of non-Saccharomyces yeast populations isolated from grape musts from Sicily (Italy)
    • Romancino D., Di Maio S., Muriella R. and Oliva D. 2008. Analysis of non-Saccharomyces yeast populations isolated from grape musts from Sicily (Italy). Journal of Applied Microbiology 105:2248-2254. http://dx.doi.org/10.1111/j.1365-2672.2008.03894.x.
    • (2008) Journal of Applied Microbiology , vol.105 , pp. 2248-2254
    • Romancino, D.1    Di Maio, S.2    Muriella, R.3    Oliva, D.4
  • 67
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F. and Huelsenbeck J.P. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574. http://dx.doi.org/10.1093/bioinformatics/btg180.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 68
    • 0036452714 scopus 로고    scopus 로고
    • Isolation and identification of yeasts associated with vineyard and winery by RFLP analysis of ribosomal genes and mitochondrial DNA
    • Sabate J., Cano J., Esteve-Zarzoso B. and Guillamón J.M. 2002. Isolation and identification of yeasts associated with vineyard and winery by RFLP analysis of ribosomal genes and mitochondrial DNA. Microbiological Research 157:267-274. http://dx.doi.org/10.1078/0944-5013-00163.
    • (2002) Microbiological Research , vol.157 , pp. 267-274
    • Sabate, J.1    Cano, J.2    Esteve-Zarzoso, B.3    Guillamón, J.M.4
  • 69
    • 80053575561 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Sampaio J.P. 2011a. Rhodotorula Harrison (1928). In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 1873-1927. http://dx.doi.org/10.1016/B978-0-444-52149-1.00155-5.
    • (2011) Rhodotorula Harrison (1928) , pp. 1873-1927
    • Sampaio, J.P.1
  • 70
    • 84884856395 scopus 로고    scopus 로고
    • In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam
    • Sampaio J.P. 2011b. Sporidiobolus Nyland (1949). In: Kurtzman C.P., Fell J.W. and Boekhout T., eds. The Yeasts, A Taxonomic Study 5th Edn. Elsevier, Amsterdam pp. 1549-1561. http://dx.doi.org/10.1016/B978-0-444-52149-1.00130-0.
    • (2011) Sporidiobolus Nyland (1949) , pp. 1549-1561
    • Sampaio, J.P.1
  • 71
    • 77954765891 scopus 로고    scopus 로고
    • A class-wide phylogenetic assessment of Dothideomycetes
    • Schoch C.L., Crous P.W., Groenewald J.Z. et al. 2009. A class-wide phylogenetic assessment of Dothideomycetes. Studies in Mycology 64:1-15. http://dx.doi.org/10.3114/sim.2009.64.01.
    • (2009) Studies in Mycology , vol.64 , pp. 1-15
    • Schoch, C.L.1    Crous, P.W.2    Groenewald, J.Z.3
  • 73
    • 0036893398 scopus 로고    scopus 로고
    • Systematics of basidiomycetous yeasts: A comparison of large subunit D1/D2 and internal transcribed spacer rDNA regions
    • Scorzetti G., Fell J.W., Fonseca A. and Statzell-Tallman A. 2002. Systematics of basidiomycetous yeasts: a comparison of large subunit D1/D2 and internal transcribed spacer rDNA regions. FEMS Yeast Research 2:495-517. http://dx.doi.org/10.1111/j.1567-1364.2002.tb00117.x.
    • (2002) FEMS Yeast Research , vol.2 , pp. 495-517
    • Scorzetti, G.1    Fell, J.W.2    Fonseca, A.3    Statzell-Tallman, A.4
  • 78
    • 18244371965 scopus 로고    scopus 로고
    • Molecular phylogeny of Ustilago, Sporisorium, and related taxa based on combined analyses of rDNA sequences Part 219 of the series: "Studies in Heterobasidiomycetes"
    • Stoll M., Begerow D. and Oberwinkler F. 2005. Molecular phylogeny of Ustilago, Sporisorium, and related taxa based on combined analyses of rDNA sequences Part 219 of the series: "Studies in Heterobasidiomycetes". Mycological Research 109:342-356. http://dx.doi.org/10.1017/S0953756204002229.
    • (2005) Mycological Research , vol.109 , pp. 342-356
    • Stoll, M.1    Begerow, D.2    Oberwinkler, F.3
  • 79
    • 77954202497 scopus 로고    scopus 로고
    • DendroPy: A Python library for phylogenetic computing
    • Sukumaran J, Holder MT. 2010. DendroPy: A Python library for phylogenetic computing. Bioinformatics 26:1569-1571. http://dx.doi.org/10.1093/bioinformatics/btq228.
    • (2010) Bioinformatics , vol.26 , pp. 1569-1571
    • Sukumaran, J.1    Holder, M.T.2
  • 80
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M. and Kumar S. 2011. MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121.
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 81
    • 44449175750 scopus 로고    scopus 로고
    • Reappraisal of the Sporobolomyces roseus species complex and description of Sporidiobolus metaroseus sp nov
    • Valerio E., Gadanho M. and Sampaio J.P. 2008. Reappraisal of the Sporobolomyces roseus species complex and description of Sporidiobolus metaroseus sp. nov. International Journal of Systematic and Evolutionary Microbiology. 58:736-741. http://dx.doi.org/10.1099/ijs.0.65580.
    • (2008) International Journal of Systematic and Evolutionary Microbiology , vol.58 , pp. 736-741
    • Valerio, E.1    Gadanho, M.2    Sampaio, J.P.3
  • 83
    • 0025374564 scopus 로고
    • Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species
    • Vilgalys R. and Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology, 172:4238-4246.
    • (1990) Journal of Bacteriology , vol.172 , pp. 4238-4246
    • Vilgalys, R.1    Hester, M.2
  • 84
    • 84888798593 scopus 로고    scopus 로고
    • In: Morris C.E., Nicot P.C. and Nguyen-The C., eds. Aerial Plant Surface Microbiology. Plenum Press, New York
    • Villa T.G. and Longo E. 1996. Microbiology of grape surfaces and its importance for wine quality. In: Morris C.E., Nicot P.C. and Nguyen-The C., eds. Aerial Plant Surface Microbiology. Plenum Press, New York, pp. 209-220.
    • (1996) Microbiology of grape surfaces and its importance for wine quality , pp. 209-220
    • Villa, T.G.1    Longo, E.2
  • 85
    • 80052238043 scopus 로고    scopus 로고
    • The diversity of ant-associated black yeasts: Insights into a newly discovered world of symbiotic interactions
    • Voglmayr H., Mayer V., Maschwitz U., Moog J., Djieto-Lordon C. and Blatrix R. 2011. The diversity of ant-associated black yeasts: insights into a newly discovered world of symbiotic interactions. Fungal Biology 115:1077-1091. http://dx.doi.org/10.1016/j.funbio.2010.11.006.
    • (2011) Fungal Biology , vol.115 , pp. 1077-1091
    • Voglmayr, H.1    Mayer, V.2    Maschwitz, U.3    Moog, J.4    Djieto-Lordon, C.5    Blatrix, R.6
  • 86
    • 49349102616 scopus 로고    scopus 로고
    • Molecular phylogeny of basidiomycetous yeasts in the Cryptococcus luteolus lineage (Tremellales) based on nuclear rRNA and mitochondrial cytochrome b gene sequence analyses: Proposal of Derxomyces gen nov. and Hannaella gen. nov., and description of eight novel Derxomyces species
    • Wang Q.-M. and Bai F.-Y. 2008. Molecular phylogeny of basidiomycetous yeasts in the Cryptococcus luteolus lineage (Tremellales) based on nuclear rRNA and mitochondrial cytochrome b gene sequence analyses: proposal of Derxomyces gen. nov. and Hannaella gen. nov., and description of eight novel Derxomyces species. FEMS Yeast Research 8:799-814. http://dx.doi.org/10.1111/j.1567-1364.2008.00403.x.
    • (2008) FEMS Yeast Research , vol.8 , pp. 799-814
    • Wang, Q.-M.1    Bai, F.-Y.2
  • 89
    • 0004210538 scopus 로고
    • United States Department of Agriculture Technical Bulletin 1029
    • Wickerham L.J. 1951. Taxonomy of yeasts. United States Department of Agriculture Technical Bulletin 1029.
    • (1951) Taxonomy of yeasts
    • Wickerham, L.J.1
  • 90
    • 4143137694 scopus 로고    scopus 로고
    • Molecular identification of yeasts from soils of the alluvial forest national park along the river Danube downstream of Vienna, Austria ("Nationalpark Donauauen")
    • Wuczkowski M. and Prillinger H. 2004. Molecular identification of yeasts from soils of the alluvial forest national park along the river Danube downstream of Vienna, Austria ("Nationalpark Donauauen"). Microbiological Research 159:263-275. http://dx.doi.org/10.1016/j.micres.2004.05.001.
    • (2004) Microbiological Research , vol.159 , pp. 263-275
    • Wuczkowski, M.1    Prillinger, H.2
  • 91
    • 79952383633 scopus 로고    scopus 로고
    • Description of Holtermanniella gen nov., including Holtermanniella takashimae sp. nov. and four new combinations, and proposal of the order Holtermanniales to accommodate tremellomycetous yeasts of the Holtermannia clade
    • Wuczkowski M., Passoth V., Turchetti B., et al. 2011. Description of Holtermanniella gen. nov., including Holtermanniella takashimae sp. nov. and four new combinations, and proposal of the order Holtermanniales to accommodate tremellomycetous yeasts of the Holtermannia clade. International Journal of Systematic and Evolutionary Microbiology 61:680-689. http://dx.doi.org/10.1099/ijs.0.019737-0.
    • (2011) International Journal of Systematic and Evolutionary Microbiology , vol.61 , pp. 680-689
    • Wuczkowski, M.1    Passoth, V.2    Turchetti, B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.