Description of Holtermanniella gen. nov., including Holtermanniella takashimae sp. nov. and four new combinations, and proposal of the order Holtermanniales to accommodate tremellomycetous yeasts of the Holtermannia clade

International Journal of Systematic and Evolutionary Microbiology

Volumn 61, Issue 3, 2011, Pages 680-689

  Wuczkowski, Michael ^a   Passoth, Volkmar ^b   Turchetti, Benedetta ^c   Andersson, Ann Christin ^b   Olstorpe, Matilda ^b   Laitila, Arja ^d   Theelen, Bart ^e   Van Broock, María ^f   Buzzini, Pietro ^c   Prillinger, Hansjörg ^a   Sterflinger, Katja ^a   Schnürer, Johan ^b   Boekhout, Teun ^e   Libkind, Diego ^f  

^a UNIVERSITY OF AGRICULTURAL SCIENCES   (Austria)

^b SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^c UNIVERSITY OF PERUGIA   (Italy)

^d VTT TECHNICAL RESEARCH CENTRE OF FINLAND   (Finland)

^e CBS KNAW FUNGAL BIODIVERSITY CENTRE   (Netherlands)

^f Instituto de Investigaciones en Biodiversidad y Medioambiente Bariloche   (Argentina)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME DNA;

ARTICLE; BASIDIOMYCETES; CLADISTICS; FUNGAL GENE; FUNGAL STRAIN; FUNGUS IDENTIFICATION; GENE SEQUENCE; GENUS; HOLTERMANNIELLA; HOLTERMANNIELLA FESTUCOSA; HOLTERMANNIELLA MYCELIALIS; HOLTERMANNIELLA NYARROWII; HOLTERMANNIELLA TAKASHIMAE; HOLTERMANNIELLA WATTICA; NONHUMAN; NUCLEOTIDE SEQUENCE; ORDO; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; UNINDEXED SEQUENCE; YEAST;

BASIDIOMYCOTA; CLUSTER ANALYSIS; CRYPTOCOCCUS; DNA FINGERPRINTING; DNA, FUNGAL; DNA, RIBOSOMAL; DNA, RIBOSOMAL SPACER; GENES, RRNA; GENOTYPE; MOLECULAR SEQUENCE DATA; MYCOLOGICAL TYPING TECHNIQUES; PHYLOGENY; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; RNA, FUNGAL; RNA, RIBOSOMAL; RNA, RIBOSOMAL, 5.8S; SEQUENCE ANALYSIS, DNA;

BASIDIOMYCOTA; CRYPTOCOCCUS (TREMELLOMYCETIDAE); CRYPTOCOCCUS (TRICHOSPORONALES); HOLTERMANNIA; HOLTERMANNIA CORNIFORMIS;

EID: 79952383633     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.019737-0     Document Type: Article

References (34)

1. Bandoni, R. J. (1995). Dimorphic Heterobasidiomycetes: taxonomy and parasitism. Stud Mycol 38, 13-27.
2. Bandoni, R. J. & Boekhout, T. (1998). Tremelloid genera with yeast phases. In The Yeasts: a Taxonomic Study, 4th edn, pp. 705-717. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.
3. Boekhout, T., Bandoni, R. J., Fell, J. W. & Kwon-Chung, K. J. (1998). Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous yeasts. In The Yeasts: a Taxonomic Study, 4th edn, pp. 609-625. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.
4. Buzzini, P., Gasparetti, C., Turchetti, B., Cramarossa, M. R., Vaughan-Martini, A., Martini, A., Pagnoni, U. M. & Forti, L. (2005). Production of volatile organic compounds (VOCs) by yeasts isolated from the ascocarps of black (Tuber melanosporum Vitt.) and white (Tuber magnatum Pico) truffles. Arch Microbiol 184, 187-193. (Pubitemid 41618689)
5. Fell, J. W., Boekhout, T., Fonseca, A., Scorzetti, G. & Statzell-Tallman, A. (2000). Biodiversity and systematics of basidiomycetous yeasts as determined by large-subunit rDNA D1/D2 domain sequence analysis. Int J Syst Evol Microbiol 50, 1351-1371. (Pubitemid 30333496)
6. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
7. Golubev, V. I. & Golubev, N. V. (2003). A new basidiomycetous yeast species, Cryptococcus mycelialis, related to Holtermannia Saccardo et Traverso. Mikrobiologiia 72, 822-827 (in Russian).
8. Golubev, W. I., Sampaio, J. P., Alves, L. & Golubev, N. W. (2004). Cryptococcus festucosus sp. nov. a new hymenomycetous yeast in the Holtermannia clade. Can J Microbiol 50, 1001-1006.
9. Guffogg, S. P., Thomas-Hall, S., Holloway, P. & Watson, K. (2004). A novel psychrotolerant member of the hymenomycetous yeasts from Antarctica: Cryptococcus watticus sp. nov. Int J Syst Evol Microbiol 54, 275-277. (Pubitemid 38181301)
10. Hibbett, D. S., Binder, M., Bischoff, J. F., Blackwell, M., Cannon, P. F., Eriksson, O. E., Huhndorf, S., James, T., Kirk, P. M. & Lücking, R. (2007). A higher-level phylogenetic classification of the Fungi. Mycol Res 111, 509-547.
11. Holtermann, C. (1898). In Mykologische Untersuchungenaus den Tropen, pp. 85-86. Berlin: Gebr. Borntraeger (in German).
12. Hong, S.-B., Go, S.-J., Shin, H.-D., Frisvad, J. C. & Samson, R. A. (2005). Polyphasic taxonomy of Aspergillus fumigatus and related species. Mycologia 97, 1316-1329. (Pubitemid 43724864)
13. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
14. Kobayashi, Y. (1937). On the genus Holtermannia of Tremellaceae. Sci Rep Tokyo Bunrika Daigaku Sect B 3, 75-81.
15. Laitila, A., Wilhelmson, A., Kotaviita, E., Olkku, J., Home, S. & Juvonen, R. (2006). Yeasts in an industrial malting ecosystem. J Ind Microbiol Biotechnol 33, 953-966. (Pubitemid 44526886)
16. Libkind, D., Arts, M. T. & van Broock, M. (2008). Fatty acid composition of cold-adapted carotenogenic basidiomycetous yeasts. Rev Argent Microbiol 40, 193-197.
17. Libkind, D., Moliné, M., Sampaio, J. P. & van Broock, M. (2009). Yeasts from high-altitude lakes: influence of UV radiation. FEMS Microbiol Ecol 69, 353-362.
18. Lyberg, K., Olstorpe, M., Passoth, V., Schnürer, J. & Lindberg, J. E. (2008). Biochemical and microbiological properties of a cereal mix fermented with whey, wet wheat distillers' grain or water at different temperatures. Anim Feed Sci Technol 144, 137-148. (Pubitemid 351783341)
19. McMurrough, I. & Rose, A. H. (1973). Effects of temperature variation on the fatty acid composition of a psychrophilic Candida species. J Bacteriol 114, 451-452.
20. Olstorpe, M., Lyberg, K., Lindberg, J. E., Schnürer, J. & Passoth, V. (2008). Population diversity of yeasts and lactic acid bacteria in pig feed fermented with whey, wet wheat distillers' grains, or water at different temperatures. Appl Environ Microbiol 74, 1696-1703. (Pubitemid 351400122)
21. Passoth, V., Blomqvist, J. & Schnürer, J. (2007). Dekkera bruxellensis and Lactobacillus vini form a stable ethanol-producing consortium in a commercial alcohol production process. Appl Environ Microbiol 73, 4354-4356. (Pubitemid 47068178)
22. Pitkaranta, M., Meklin, T., Hyvarinen, A., Paulin, L., Auvinen, P., Nevalainen, A. & Rintala, H. (2008). Analysis of fungal flora in indoor dust by ribosomal DNA sequence analysis, quantitative PCR, and culture. Appl Environ Microbiol 74, 233-244.
23. Rossi, M., Buzzini, P., Cordisco, L., Amaretti, A., Sala, M., Raimondi, S., Ponzoni, C., Pagnoni, U. M. & Matteuzzi, D. (2009). Growth, lipid accumulation, and fatty acid composition in obligate psychrophilic, facultative psychrophilic, and mesophilic yeasts. FEMS Microbiol Ecol 69, 363-372.
24. Saccardo, P. A. & Traverso, J. B. (1910). Holtermannia Sacc. et Trav. (Tremellaceae). In Sylloge Fungorum, vol. XIX, p. 871. Patavii: Typis Seminarii.
25. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
26. Sampaio, J. P. (2004). Diversity, phylogeny and classification of basidiomycetous yeasts. In Frontiers in Basidiomycete Mycology, pp. 49-80. Edited by R. Agerer, M. Piepenbring & P. Blanz. Eching, Germany: IHW-Verlag.
27. Sampaio, J. P., Gadanho, M., Bauer, R. & Weiß, M. (2003). Taxonomic studies in the Microbotryomycetidae: Leucosporidium golubevii sp. nov., Leucosporidiella gen. nov. and the new orders Leucosporidiales and Sporidiobolales. Mycol Prog 2, 53-68.
28. Scorzetti, G., Fell, J. W., Fonseca, A. & Statzell-Tallman, A. (2002). Systematics of basidiomycetous yeasts: a comparison of large subunit D1/D2 and internal transcribed spacer rDNA regions. FEM Yeast Res 2, 495-517. (Pubitemid 35373955)
29. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599. (Pubitemid 47236692)
30. Thomas-Hall, S. R. (2004). Physiological and biochemical characterisation of Antarctic yeast. PhD thesis, University of New England, Armidale, Australia.
31. Thomas-Hall, S. & Watson, K. (2002). Cryptococcus nyarrowii sp. nov., a basidiomycetous yeast from Antarctica. Int J Syst Evol Microbiol 52, 1033-1038. (Pubitemid 34591236)
32. Wuczkowski, M., Druzhinina, I., Gherbawy, Y., Klug, B., Prillinger, H. & Kubicek, C. P. (2003a). Species pattern and genetic diversity of Trichoderma in a mid-European, primeval floodplain-forest. Microbiol Res 158, 125-133. (Pubitemid 36900846)
33. Wuczkowski, M., Sterflinger, K., Kraus, G. F., Klug, B. & Prillinger, H. (2003b). Diversity of microfungi and yeasts in soils of the alluvial zone national park along the river Danube downstream of Vienna, Austria ("Nationalpark Donauauen"). Bodenkultur 54, 109-118.
34. Yarrow, D. (1998). Methods for the isolation and identification of yeasts. In The Yeasts, a Taxonomic Study, 4th edn, pp. 77-100. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.