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Volumn 7, Issue 12, 2013, Pages 2259-2273

Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight

Author keywords

ARISA; community ecology; marine bacterioplankton; microbe microbe interactions; time series

Indexed keywords

RIBOSOMAL SPACER DNA; RNA 16S; SEA WATER;

EID: 84888200521     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2013.122     Document Type: Article
Times cited : (132)

References (67)
  • 1
    • 0342506808 scopus 로고    scopus 로고
    • Spatial and temporal variation in marine bacterioplankton diversity as shown by RFLP fingerprinting of PCR amplified 16S rDNA
    • DOI 10.1016/S0168-6496(97)00031-7, PII S0168649697000317
    • Acinas SG, Rodríguez Valera F, Pedrés-Alié C. (1997). Spatial and temporal variation in marine bacterioplankton diversity as shown by RFLP fingerprinting of PCR amplified 16S rDNA. FEMS Microbiol Ecol 24: 27-40 (Pubitemid 27402260)
    • (1997) FEMS Microbiology Ecology , vol.24 , Issue.1 , pp. 27-40
    • Acinas, S.G.1    Rodriguez-Valera, F.2    Pedros-Alio, C.3
  • 3
    • 76349119916 scopus 로고    scopus 로고
    • Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities
    • Andersson AF, Riemann L, Bertilsson S. (2010). Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities. ISME J 4: 171-181
    • (2010) ISME J , vol.4 , pp. 171-181
    • Andersson, A.F.1    Riemann, L.2    Bertilsson, S.3
  • 5
    • 77953553271 scopus 로고    scopus 로고
    • Population ecology of nitrifying Archaea and Bacteria in the Southern California Bight
    • Beman JM, Sachdeva R, Fuhrman JA. (2010). Population ecology of nitrifying Archaea and Bacteria in the Southern California Bight. Environ Microbiol 12: 1282-1292
    • (2010) Environ Microbiol , vol.12 , pp. 1282-1292
    • Beman, J.M.1    Sachdeva, R.2    Fuhrman, J.A.3
  • 6
    • 79959607043 scopus 로고    scopus 로고
    • Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California
    • Beman JM, Steele JA, Fuhrman JA. (2011). Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California. ISME J 5: 1077-1085
    • (2011) ISME J , vol.5 , pp. 1077-1085
    • Beman, J.M.1    Steele, J.A.2    Fuhrman, J.A.3
  • 7
    • 28944440027 scopus 로고    scopus 로고
    • Marine bacterial microdiversity as revealed by internal transcribed spacer analysis
    • Brown MV, Fuhrman JA. (2005). Marine bacterial microdiversity as revealed by internal transcribed spacer analysis. Aquat Microb Ecol 41: 15-23 (Pubitemid 41784249)
    • (2005) Aquatic Microbial Ecology , vol.41 , Issue.1 , pp. 15-23
    • Brown, M.V.1    Fuhrman, J.A.2
  • 9
    • 23944517269 scopus 로고    scopus 로고
    • Coupling 16S-ITS rDNA clone libraries and automated ribosomal intergenic spacer analysis to show marine microbial diversity: Development and application to a time series
    • DOI 10.1111/j.1462-2920.2005.00835.x
    • Brown MV, Schwalbach MS, Hewson I, Fuhrman JA. (2005). Coupling 16S-ITS rDNA clone libraries and automated ribosomal intergenic spacer analysis to show marine microbial diversity: development and application to a time series. Environ Microbiol 7: 1466-1479 (Pubitemid 41204940)
    • (2005) Environmental Microbiology , vol.7 , Issue.9 , pp. 1466-1479
    • Brown, M.V.1    Schwalbach, M.S.2    Hewson, I.3    Fuhrman, J.A.4
  • 11
    • 77951553369 scopus 로고    scopus 로고
    • Distinct patterns of picocyanobacterial communities in winter and summer in the Chesapeake Bay
    • Cai H, Wang K, Huang S, Jiao N, Chen F. (2010). Distinct Patterns of Picocyanobacterial Communities in Winter and Summer in the Chesapeake Bay. Appl. Environ. Microbiol 76: 2955-2960
    • (2010) Appl. Environ. Microbiol , vol.76 , pp. 2955-2960
    • Cai, H.1    Wang, K.2    Huang, S.3    Jiao, N.4    Chen, F.5
  • 13
    • 84861347511 scopus 로고    scopus 로고
    • Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea
    • Carlson CA, Morris R, Parsons R, Treusch AH, Giovannoni SJ, Vergin KL. (2009). Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea. ISME J 3: 283-295
    • (2012) ISME J , vol.6 , pp. 1089-1093
    • Caporaso, J.G.1    Paszkiewicz, K.2    Field, D.3    Knight, R.4    Gilbert, J.A.5
  • 14
    • 84864383742 scopus 로고    scopus 로고
    • Seasonality and monthly dynamics of marine myovirus communities
    • Chow C-ET, Fuhrman JA. (2012). Seasonality and monthly dynamics of marine myovirus communities. Environ Microbiol 14: 2171-2183
    • (2012) Environ Microbiol , vol.14 , pp. 2171-2183
    • Chow, C.T.1    Fuhrman, J.A.2
  • 15
    • 0027804103 scopus 로고
    • Non-parametric multivariate analyses of changes in community structure
    • Clarke KR. (1993). Non-parametric multivariate analyses of changes in community structure. Aust J Ecol 18: 117-143 (Pubitemid 24409223)
    • (1993) Australian Journal of Ecology , vol.18 , Issue.1 , pp. 117-143
    • Clarke, K.R.1
  • 17
    • 58149200948 scopus 로고    scopus 로고
    • The Ribosomal Database Project: Improved alignments and new tools for rRNA analysis
    • Cole JR, Wang Q, Cardenas E, Fish J, Chai B, Farris RJ et al. (2009). the Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37: D141-D145
    • (2009) Nucleic Acids Res , vol.37
    • Cole, J.R.1    Wang, Q.2    Cardenas, E.3    Fish, J.4    Chai, B.5    Farris, R.J.6
  • 19
    • 33646115828 scopus 로고    scopus 로고
    • Abundance and distribution of Ostreococcus sp. in the San Pedro Channel, California, as revealed by quantitative PCR
    • Countway PD, Caron DA. (2006). Abundance and distribution of Ostreococcus sp. in the San Pedro Channel, California, as revealed by quantitative PCR. Appl Environ Microbiol 72: 2496-2506
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2496-2506
    • Countway, P.D.1    Caron, D.A.2
  • 20
    • 78649618453 scopus 로고    scopus 로고
    • Seasonal analysis of protistan community structure and diversity at the USC Microbial Observatory (San Pedro Channel, North Pacific Ocean
    • Countway PD, Vigil PD, Schnetzer A, Moorthi SD, Caron DA. (2010). Seasonal analysis of protistan community structure and diversity at the USC Microbial Observatory (San Pedro Channel, North Pacific Ocean). Limnol Oceanogr 55: 2381-2396
    • (2010) Limnol Oceanogr , vol.55 , pp. 2381-2396
    • Countway, P.D.1    Vigil, P.D.2    Schnetzer, A.3    Moorthi, S.D.4    Caron, D.A.5
  • 21
    • 70349448179 scopus 로고    scopus 로고
    • Contributions of long-term research and time-series observations to marine ecology and biogeochemistry
    • Ducklow HW, Doney SC, Steinberg DK. (2009). Contributions of Long-Term Research and Time-Series Observations to Marine Ecology and Biogeochemistry. Annu Rev Marine Sci 1: 279-302
    • (2009) Annu Rev Marine Sci , vol.1 , pp. 279-302
    • Ducklow, H.W.1    Doney, S.C.2    Steinberg, D.K.3
  • 22
    • 69949095008 scopus 로고    scopus 로고
    • Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre
    • Eiler A, Hayakawa DH, Church MJ, Karl DM, Rappé MS. (2009). Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre. Environ Microbiol 11: 2291-2300
    • (2009) Environ Microbiol , vol.11 , pp. 2291-2300
    • Eiler, A.1    Hayakawa, D.H.2    Church, M.J.3    Karl, D.M.4    Rappé, M.S.5
  • 23
    • 84875524387 scopus 로고    scopus 로고
    • Non-random assembly of bacterioplankton communities in the subtropical north pacific ocean
    • Eiler A, Hayakawa DH, Rappé MS. (2011). Non-random assembly of bacterioplankton communities in the subtropical north pacific ocean. Front Microbio 2: 1-10
    • (2011) Front Microbio , vol.2 , pp. 1-10
    • Eiler, A.1    Hayakawa, D.H.2    Rappé, M.S.3
  • 24
    • 84855951093 scopus 로고    scopus 로고
    • Coherent dynamics and association networks among lake bacterioplankton taxa
    • Eiler A, Heinrich F, Bertilsson S. (2012). Coherent dynamics and association networks among lake bacterioplankton taxa. ISME J 6: 330-342
    • (2012) ISME J , vol.6 , pp. 330-342
    • Eiler, A.1    Heinrich, F.2    Bertilsson, S.3
  • 25
    • 0032879764 scopus 로고    scopus 로고
    • Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities
    • Fisher MM, Triplett EW. (1999). Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities. Appl Environ Microbiol 65: 4630-4636
    • (1999) Appl Environ Microbiol , vol.65 , pp. 4630-4636
    • Fisher, M.M.1    Triplett, E.W.2
  • 26
    • 84857117285 scopus 로고    scopus 로고
    • Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient
    • Fortunato CS, Herfort L, Zuber P, Baptista AM, Crump BC. (2012). Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient. ISME J 6: 554-563
    • (2012) ISME J , vol.6 , pp. 554-563
    • Fortunato, C.S.1    Herfort, L.2    Zuber, P.3    Baptista, A.M.4    Crump, B.C.5
  • 27
    • 66149150877 scopus 로고    scopus 로고
    • Microbial community structure and its functional implications
    • Fuhrman JA. (2009). Microbial community structure and its functional implications. Nature 459: 193-199
    • (2009) Nature , vol.459 , pp. 193-199
    • Fuhrman, J.A.1
  • 30
    • 71249091315 scopus 로고    scopus 로고
    • The seasonal structure of microbial communities in the Western English Channel
    • Gilbert JA, Field D, Swift P, Newbold L, Oliver A, Smyth T et al. (2009). the seasonal structure of microbial communities in the Western English Channel. Environ Microbiol 11: 3132-3139
    • (2009) Environ Microbiol , vol.11 , pp. 3132-3139
    • Gilbert, J.A.1    Field, D.2    Swift, P.3    Newbold, L.4    Oliver, A.5    Smyth, T.6
  • 32
    • 84857029292 scopus 로고    scopus 로고
    • Seasonality in Ocean Microbial Communities
    • Giovannoni SJ, Vergin KL. (2012). Seasonality in Ocean Microbial Communities. Science 335: 671-676
    • (2012) Science , vol.335 , pp. 671-676
    • Giovannoni, S.J.1    Vergin, K.L.2
  • 33
    • 0034076291 scopus 로고    scopus 로고
    • The calibration and validation of SeaWiFS data
    • DOI 10.1016/S0079-6611(00)00012-4, PII S0079661100000124
    • Hooker SB, McClain CR. (2000). the calibration and validation of SeaWiFS data. Prog Oceanogr 45: 427-465 (Pubitemid 30329557)
    • (2000) Progress in Oceanography , vol.45 , Issue.3-4 , pp. 427-465
    • Hooker, S.B.1    McClain, C.R.2
  • 34
    • 35948973596 scopus 로고    scopus 로고
    • High temporal but low spatial heterogeneity of bacterioplankton in the Chesapeake Bay
    • DOI 10.1128/AEM.00541-07
    • Kan J, Suzuki MT, Wang K, Evans SE, Chen F. (2007). High Temporal but Low Spatial Heterogeneity of Bacterioplankton in the Chesapeake Bay. Appl Environ Microbiol 73: 6776-6789 (Pubitemid 350076796)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.21 , pp. 6776-6789
    • Kan, J.1    Suzuki, M.T.2    Wang, K.3    Evans, S.E.4    Chen, F.5
  • 36
    • 0031743036 scopus 로고    scopus 로고
    • Annual average abundance of heterotrophic bacteria and Synechococcus in surface ocean waters
    • Li W. (1998). Annual average abundance of heterotrophic bacteria and Synechococcus in surface ocean waters. Limnol Oceanogr 43: 1746-1753 (Pubitemid 28552089)
    • (1998) Limnology and Oceanography , vol.43 , Issue.7 , pp. 1746-1753
    • Li, W.K.W.1
  • 38
    • 84857122937 scopus 로고    scopus 로고
    • An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
    • McDonald D, Price MN, Goodrich J, Nawrocki EP, DeSantis TZ, Probst A et al. (2011). An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. ISME J 6: 610-618
    • (2011) ISME J , vol.6 , pp. 610-618
    • McDonald, D.1    Price, M.N.2    Goodrich, J.3    Nawrocki, E.P.4    Desantis, T.Z.5    Probst, A.6
  • 39
    • 33746327503 scopus 로고    scopus 로고
    • Ecological networks and their fragility
    • DOI 10.1038/nature04927, PII NATURE04927
    • Montoya JM, Pimm SL, Solé RV. (2006). Ecological networks and their fragility. Nature 442: 259-264 (Pubitemid 44114895)
    • (2006) Nature , vol.442 , Issue.7100 , pp. 259-264
    • Montoya, J.M.1    Pimm, S.L.2    Sole, R.V.3
  • 40
    • 84859994630 scopus 로고    scopus 로고
    • Basin-scale patterns in the abundance of SAR11 subclades, marine Actinobacteria (OM1), members of the Roseobacter clade and OCS116 in the South Atlantic
    • Morris RM, Frazar CD, Carlson CA. (2012). Basin-scale patterns in the abundance of SAR11 subclades, marine Actinobacteria (OM1), members of the Roseobacter clade and OCS116 in the South Atlantic. Environ Microbiol 14: 1133-1144
    • (2012) Environ Microbiol , vol.14 , pp. 1133-1144
    • Morris, R.M.1    Frazar, C.D.2    Carlson, C.A.3
  • 42
    • 25144481245 scopus 로고    scopus 로고
    • Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic Time-series Study site
    • Morris RM, Vergin KL, Cho JC, Rappé MS, Carlson CA, Giovannoni SJ. (2005). Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic Time-series Study site. Limnol. Oceanogr 50: 1687-1696 (Pubitemid 41356448)
    • (2005) Limnology and Oceanography , vol.50 , Issue.5 , pp. 1687-1696
    • Morris, R.M.1    Vergin, K.L.2    Cho, J.-C.3    Rappe, M.S.4    Carlson, C.A.5    Giovannoni, S.J.6
  • 43
    • 84880922997 scopus 로고    scopus 로고
    • Short-term observations of marine bacterial and viral communities: Patterns, connections and resilience
    • Needham DM, Chow C-ET, Cram JA, Sachdeva R, Parada A, Fuhrman JA. (2013). Short-term observations of marine bacterial and viral communities: patterns, connections and resilience. ISME J 7: 1274-1285
    • (2013) ISME J , vol.7 , pp. 1274-1285
    • Needham, D.M.1    C-Et, C.2    Cram, J.A.3    Sachdeva, R.4    Parada, A.5    Fuhrman, J.A.6
  • 44
    • 0001679973 scopus 로고    scopus 로고
    • Use of SYBR Green I for rapid epifluorescence counts of marine viruses and bacteria
    • Noble RT, Fuhrman JA. (1998). Use of SYBR Green I for rapid epifluorescence counts of marine viruses and bacteria. Aquat. Microb. Ecol 14: 113-118 (Pubitemid 128474827)
    • (1998) Aquatic Microbial Ecology , vol.14 , Issue.2 , pp. 113-118
    • Noble, R.T.1    Fuhrman, J.A.2
  • 45
    • 84857866290 scopus 로고    scopus 로고
    • Seasonal change in the abundance of Synechococcus and multiple distinct phylotypes in Monterey Bay determined by rbcL and narB quantitative PCR
    • Paerl R, Turk K, Beinart R, Chavez FP, Zehr J. (2012). Seasonal change in the abundance of Synechococcus and multiple distinct phylotypes in Monterey Bay determined by rbcL and narB quantitative PCR. Environ Microbiol 14: 580-593
    • (2012) Environ Microbiol , vol.14 , pp. 580-593
    • Paerl, R.1    Turk, K.2    Beinart, R.3    Chavez, F.P.4    Zehr, J.5
  • 46
    • 84855931244 scopus 로고    scopus 로고
    • Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea
    • Parsons RJ, Breitbart M, Lomas MW, Carlson CA. (2012). Ocean time-series reveals recurring seasonal patterns of virioplankton dynamics in the northwestern Sargasso Sea. ISME J 6: 273-284
    • (2012) ISME J , vol.6 , pp. 273-284
    • Parsons, R.J.1    Breitbart, M.2    Lomas, M.W.3    Carlson, C.A.4
  • 47
    • 34247535716 scopus 로고    scopus 로고
    • Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I
    • DOI 10.1038/nprot.2007.6, PII NPROT.2007.6
    • Patel A, Noble RT, Steele JA, Schwalbach MS, Hewson I, Fuhrman JA. (2007). Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I. Nat Protoc 2: 269-276 (Pubitemid 47040041)
    • (2007) Nature Protocols , vol.2 , Issue.2 , pp. 269-276
    • Patel, A.1    Noble, R.T.2    Steele, J.A.3    Schwalbach, M.S.4    Hewson, I.5    Fuhrman, J.A.6
  • 49
    • 37549027613 scopus 로고    scopus 로고
    • SILVA:Aa comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J et al. (2007). SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5    Peplies, J.6
  • 50
    • 84857111331 scopus 로고    scopus 로고
    • Seasonal Synechococcus and thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation
    • Robidart JC, Preston CM, Paerl RW, Turk KA, Mosier AC, Francis CA et al. (2012). Seasonal Synechococcus and thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation. ISME J 6: 513-523
    • (2012) ISME J , vol.6 , pp. 513-523
    • Robidart, J.C.1    Preston, C.M.2    Paerl, R.W.3    Turk, K.A.4    Mosier, A.C.5    Francis, C.A.6
  • 51
    • 0036200876 scopus 로고    scopus 로고
    • Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences
    • DOI 10.1128/AEM.68.3.1180-1191.2002
    • Rocap G, Distel DL, Waterbury JB, Chisholm SW. (2002). Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences. Appl Environ Microbiol 68: 1180-1191 (Pubitemid 34205356)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.3 , pp. 1180-1191
    • Rocap, G.1    Distel, D.L.2    Waterbury, J.B.3    Chisholm, S.W.4
  • 52
    • 33749824905 scopus 로고    scopus 로고
    • Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors
    • DOI 10.1093/bioinformatics/btl417
    • Ruan Q, Dutta D, Schwalbach MS, Steele JA, Fuhrman JA, Sun F. (2006a). Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors. Bioinformatics 22: 2532-2538 (Pubitemid 44560760)
    • (2006) Bioinformatics , vol.22 , Issue.20 , pp. 2532-2538
    • Ruan, Q.1    Dutta, D.2    Schwalbach, M.S.3    Steele, J.A.4    Fuhrman, J.A.5    Sun, F.6
  • 53
    • 33745606460 scopus 로고    scopus 로고
    • A dynamic programming algorithm for binning microbial community profiles
    • DOI 10.1093/bioinformatics/btl114
    • Ruan Q, Steele JA, Schwalbach MS, Fuhrman JA, Sun F. (2006b). A dynamic programming algorithm for binning microbial community profiles. Bioinformatics 22: 1508-1514 (Pubitemid 43985323)
    • (2006) Bioinformatics , vol.22 , Issue.12 , pp. 1508-1514
    • Ruan, Q.1    Steele, J.A.2    Schwalbach, M.S.3    Fuhrman, J.A.4    Sun, F.5
  • 54
    • 84855294263 scopus 로고    scopus 로고
    • Beyond the Venn diagram: The hunt for a core microbiome
    • Shade A, Handelsman J. (2012). Beyond the Venn diagram: the hunt for a core microbiome. Environ Microbiol 14: 4-12
    • (2012) Environ Microbiol , vol.14 , pp. 4-12
    • Shade, A.1    Handelsman, J.2
  • 56
    • 79959611518 scopus 로고    scopus 로고
    • Response of Prochlorococcus ecotypes to co-culture with diverse marine bacteria
    • Sher D, thompson JW, Kashtan N, Croal L, Chisholm SW. (2011). Response of Prochlorococcus ecotypes to co-culture with diverse marine bacteria. ISME J 5: 1125-1132
    • (2011) ISME J , vol.5 , pp. 1125-1132
    • Sher, D.1    Thompson, J.W.2    Kashtan, N.3    Croal, L.4    Chisholm, S.W.5
  • 57
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: New features for data integration and network visualization
    • Smoot ME, Ono K, Ruscheinski J, Wang P-L, Ideker T. (2011). Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 27: 431-432
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.E.1    Ono, K.2    Ruscheinski, J.3    Wang, P.-L.4    Ideker, T.5
  • 58
    • 80052061077 scopus 로고    scopus 로고
    • Marine bacterial, archaeal and protistan association networks reveal ecological linkages
    • Steele JA, Countway PD, Xia L, Vigil PD, Beman JM, Kim DY et al. (2011). Marine bacterial, archaeal and protistan association networks reveal ecological linkages. ISME J 5: 1414-1425
    • (2011) ISME J , vol.5 , pp. 1414-1425
    • Steele, J.A.1    Countway, P.D.2    Xia, L.3    Vigil, P.D.4    Beman, J.M.5    Kim, D.Y.6
  • 59
    • 0036020892 scopus 로고    scopus 로고
    • A direct approach to false discovery rates
    • Storey JD. (2002). A direct approach to false discovery rates. J Roy Stat Soc B Met 64: 479-498
    • (2002) J Roy Stat Soc B Met , vol.64 , pp. 479-498
    • Storey, J.D.1
  • 60
    • 68649098735 scopus 로고    scopus 로고
    • Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site
    • Tai V, Palenik B. (2009). Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site. ISME J 3: 903-915
    • (2009) ISME J , vol.3 , pp. 903-915
    • Tai, V.1    Palenik, B.2
  • 62
    • 0032482432 scopus 로고    scopus 로고
    • Collective dynamics of ?Small-world? Networks
    • Watts DJ, Strogatz SH. (1998). Collective dynamics of ?small-world? networks. Nature 393: 440-442
    • (1998) Nature , vol.393 , pp. 440-442
    • Watts, D.J.1    Strogatz, S.H.2
  • 64
    • 84872568885 scopus 로고    scopus 로고
    • Efficient statistical significance approximation for local association analysis of high-throughput time series data
    • Xia LC, Ai D, Cram JA, Fuhrman JA, Sun F. (2013). Efficient Statistical Significance Approximation for Local Association Analysis of High-throughput Time Series Data. Bioinformatics 29: 230-237
    • (2013) Bioinformatics , vol.29 , pp. 230-237
    • Xia, L.C.1    Ai, D.2    Cram, J.A.3    Fuhrman, J.A.4    Sun, F.5
  • 65
    • 84870506713 scopus 로고    scopus 로고
    • Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates
    • Xia LC, Steele JA, Cram JA, Cardon ZG, Simmons SL, Vallino JJ et al. (2011). Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates. BMC Syst. Biol 5: S15
    • (2011) BMC Syst. Biol , vol.5
    • Xia, L.C.1    Steele, J.A.2    Cram, J.A.3    Cardon, Z.G.4    Simmons, S.L.5    Vallino, J.J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.