메뉴 건너뛰기




Volumn 14, Issue 1, 2013, Pages

The Drosophila early ovarian transcriptome provides insight to the molecular causes of recombination rate variation across genomes

Author keywords

Crossing over; Gene expression; Germarium; Maternal effect; Oogenesis; Recombination; RNA seq

Indexed keywords

DOUBLE STRANDED DNA; MESSENGER RNA; TRANSCRIPTOME;

EID: 84887538485     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-794     Document Type: Article
Times cited : (15)

References (72)
  • 1
    • 57749195712 scopus 로고    scopus 로고
    • RNA-Seq: a revolutionary tool for transcriptomics
    • 10.1038/nrg2484, 2949280, 19015660
    • Wang Z, Gerstein M, Snyder M. RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 2009, 10:57-63. 10.1038/nrg2484, 2949280, 19015660.
    • (2009) Nat Rev Genet , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 3
    • 80755182465 scopus 로고    scopus 로고
    • The molecular control of meiotic chromosomal behavior: events in early meiotic prophase in Drosophila oocytes
    • 10.1146/annurev-physiol-020911-153342, 22335798
    • Lake CM, Hawley RS. The molecular control of meiotic chromosomal behavior: events in early meiotic prophase in Drosophila oocytes. Annu Rev Physiol 2012, 74:425-451. 10.1146/annurev-physiol-020911-153342, 22335798.
    • (2012) Annu Rev Physiol , vol.74 , pp. 425-451
    • Lake, C.M.1    Hawley, R.S.2
  • 4
    • 77956413306 scopus 로고    scopus 로고
    • Symmetry breaking during Drosophila oogenesis
    • 10.1101/cshperspect.a001891, 2742093, 20066085
    • Roth S, Lynch JA. Symmetry breaking during Drosophila oogenesis. Cold Spring Harb Perspect Biol 2009, 1:a001891. 10.1101/cshperspect.a001891, 2742093, 20066085.
    • (2009) Cold Spring Harb Perspect Biol , vol.1
    • Roth, S.1    Lynch, J.A.2
  • 5
    • 33846226547 scopus 로고    scopus 로고
    • The Drosophila ovary: an active stem cell community
    • 10.1038/sj.cr.7310123, 17199109
    • Kirilly D, Xie T. The Drosophila ovary: an active stem cell community. Cell Res 2007, 17:15-25. 10.1038/sj.cr.7310123, 17199109.
    • (2007) Cell Res , vol.17 , pp. 15-25
    • Kirilly, D.1    Xie, T.2
  • 7
    • 0002031074 scopus 로고
    • Developmental genetics of oogenesis
    • Cold Spring Harbor, N.Y: Cold Spring Harbor Press, Bate MaM-A A
    • Spradling AC. Developmental genetics of oogenesis. The Development of Drosophila melanogaster. Volume 1 1993, 1-70. Cold Spring Harbor, N.Y: Cold Spring Harbor Press, Bate MaM-A A.
    • (1993) The Development of Drosophila melanogaster. Volume 1 , pp. 1-70
    • Spradling, A.C.1
  • 8
    • 79956292096 scopus 로고    scopus 로고
    • Long-term live imaging provides new insight into stem cell regulation and germline-soma coordination in the Drosophila ovary
    • 10.1242/dev.065508, 3091492, 21558370
    • Morris LX, Spradling AC. Long-term live imaging provides new insight into stem cell regulation and germline-soma coordination in the Drosophila ovary. Development 2011, 138:2207-2215. 10.1242/dev.065508, 3091492, 21558370.
    • (2011) Development , vol.138 , pp. 2207-2215
    • Morris, L.X.1    Spradling, A.C.2
  • 9
    • 4844222675 scopus 로고    scopus 로고
    • A survey of ovary-, testis-, and soma-biased gene expression in Drosophila melanogaster adults
    • 10.1186/gb-2004-5-6-r40, 463073, 15186491
    • Parisi M, Nuttall R, Edwards P, Minor J, Naiman D, Lu J, Doctolero M, Vainer M, Chan C, Malley J, et al. A survey of ovary-, testis-, and soma-biased gene expression in Drosophila melanogaster adults. Genome Biol 2004, 5:R40. 10.1186/gb-2004-5-6-r40, 463073, 15186491.
    • (2004) Genome Biol , vol.5
    • Parisi, M.1    Nuttall, R.2    Edwards, P.3    Minor, J.4    Naiman, D.5    Lu, J.6    Doctolero, M.7    Vainer, M.8    Chan, C.9    Malley, J.10
  • 10
    • 77953231368 scopus 로고    scopus 로고
    • Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq
    • 10.1038/cr.2010.64, 2919574, 20440302
    • Gan Q, Chepelev I, Wei G, Tarayrah L, Cui K, Zhao K, Chen X. Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq. Cell Res 2010, 20:763-783. 10.1038/cr.2010.64, 2919574, 20440302.
    • (2010) Cell Res , vol.20 , pp. 763-783
    • Gan, Q.1    Chepelev, I.2    Wei, G.3    Tarayrah, L.4    Cui, K.5    Zhao, K.6    Chen, X.7
  • 12
    • 79959857202 scopus 로고    scopus 로고
    • Genetic analysis of genome-scale recombination rate evolution in house mice
    • 10.1371/journal.pgen.1002116, 3111479, 21695226
    • Dumont BL, Payseur BA. Genetic analysis of genome-scale recombination rate evolution in house mice. PLoS Genet 2011, 7:e1002116. 10.1371/journal.pgen.1002116, 3111479, 21695226.
    • (2011) PLoS Genet , vol.7
    • Dumont, B.L.1    Payseur, B.A.2
  • 13
    • 79959257505 scopus 로고    scopus 로고
    • Variation in human recombination rates and its genetic determinants
    • 10.1371/journal.pone.0020321, 3117798, 21698098
    • Fledel-Alon A, Leffler EM, Guan Y, Stephens M, Coop G, Przeworski M. Variation in human recombination rates and its genetic determinants. PLoS One 2011, 6:e20321. 10.1371/journal.pone.0020321, 3117798, 21698098.
    • (2011) PLoS One , vol.6
    • Fledel-Alon, A.1    Leffler, E.M.2    Guan, Y.3    Stephens, M.4    Coop, G.5    Przeworski, M.6
  • 14
    • 39449116116 scopus 로고    scopus 로고
    • High-resolution mapping of crossovers reveals extensive variation in fine-scale recombination patterns among humans
    • 10.1126/science.1151851, 18239090
    • Coop G, Wen X, Ober C, Pritchard JK, Przeworski M. High-resolution mapping of crossovers reveals extensive variation in fine-scale recombination patterns among humans. Science 2008, 319:1395-1398. 10.1126/science.1151851, 18239090.
    • (2008) Science , vol.319 , pp. 1395-1398
    • Coop, G.1    Wen, X.2    Ober, C.3    Pritchard, J.K.4    Przeworski, M.5
  • 15
    • 33749380600 scopus 로고    scopus 로고
    • A high-resolution map of Arabidopsis recombinant inbred lines by whole-genome exon array hybridization
    • 10.1371/journal.pgen.0020144, 1564425, 17044735
    • Singer T, Fan Y, Chang HS, Zhu T, Hazen SP, Briggs SP. A high-resolution map of Arabidopsis recombinant inbred lines by whole-genome exon array hybridization. PLoS Genet 2006, 2:e144. 10.1371/journal.pgen.0020144, 1564425, 17044735.
    • (2006) PLoS Genet , vol.2
    • Singer, T.1    Fan, Y.2    Chang, H.S.3    Zhu, T.4    Hazen, S.P.5    Briggs, S.P.6
  • 16
    • 48249092245 scopus 로고    scopus 로고
    • Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence
    • 10.1073/pnas.0801848105, 2481358, 18621713
    • Kulathinal RJ, Bennett SM, Fitzpatrick CL, Noor MA. Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence. Proc Natl Acad Sci USA 2008, 105:10051-10056. 10.1073/pnas.0801848105, 2481358, 18621713.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 10051-10056
    • Kulathinal, R.J.1    Bennett, S.M.2    Fitzpatrick, C.L.3    Noor, M.A.4
  • 17
    • 61849143272 scopus 로고    scopus 로고
    • Recombinational landscape and population genomics of Caenorhabditis elegans
    • 10.1371/journal.pgen.1000419, 2652117, 19283065
    • Rockman MV, Kruglyak L. Recombinational landscape and population genomics of Caenorhabditis elegans. PLoS Genet 2009, 5:e1000419. 10.1371/journal.pgen.1000419, 2652117, 19283065.
    • (2009) PLoS Genet , vol.5
    • Rockman, M.V.1    Kruglyak, L.2
  • 18
    • 77955146078 scopus 로고    scopus 로고
    • Natural selection shapes nucleotide polymorphism across the genome of the nematode Caenorhabditis briggsae
    • 10.1101/gr.104331.109, 2909573, 20508143
    • Cutter AD, Choi JY. Natural selection shapes nucleotide polymorphism across the genome of the nematode Caenorhabditis briggsae. Genome Res 2010, 20:1103-1111. 10.1101/gr.104331.109, 2909573, 20508143.
    • (2010) Genome Res , vol.20 , pp. 1103-1111
    • Cutter, A.D.1    Choi, J.Y.2
  • 19
    • 84870266437 scopus 로고    scopus 로고
    • Recombination modulates how selection affects linked sites in Drosophila
    • 10.1371/journal.pbio.1001422, 3496668, 23152720
    • McGaugh SE, Heil CS, Manzano-Winkler B, Loewe L, Goldstein S, Himmel TL, Noor MA. Recombination modulates how selection affects linked sites in Drosophila. PLoS Biol 2012, 10:e1001422. 10.1371/journal.pbio.1001422, 3496668, 23152720.
    • (2012) PLoS Biol , vol.10
    • McGaugh, S.E.1    Heil, C.S.2    Manzano-Winkler, B.3    Loewe, L.4    Goldstein, S.5    Himmel, T.L.6    Noor, M.A.7
  • 20
    • 84868143643 scopus 로고    scopus 로고
    • The many landscapes of recombination in Drosophila melanogaster
    • 10.1371/journal.pgen.1002905, 3469467, 23071443
    • Comeron JM, Ratnappan R, Bailin S. The many landscapes of recombination in Drosophila melanogaster. PLoS Genet 2012, 8:e1002905. 10.1371/journal.pgen.1002905, 3469467, 23071443.
    • (2012) PLoS Genet , vol.8
    • Comeron, J.M.1    Ratnappan, R.2    Bailin, S.3
  • 21
    • 0037624820 scopus 로고
    • A relation between larval nutrition and the frequency of crossing over in the third chromosome of Drosophila melanogaster
    • 1209143, 17247020
    • Neel JV. A relation between larval nutrition and the frequency of crossing over in the third chromosome of Drosophila melanogaster. Genetics 1941, 26:506-516. 1209143, 17247020.
    • (1941) Genetics , vol.26 , pp. 506-516
    • Neel, J.V.1
  • 22
    • 0024224084 scopus 로고
    • Evolutionary rates: effects of stress upon recombination
    • Parsons PA. Evolutionary rates: effects of stress upon recombination. Biol J Linn Soc 1988, 35:49-68.
    • (1988) Biol J Linn Soc , vol.35 , pp. 49-68
    • Parsons, P.A.1
  • 23
    • 38349188956 scopus 로고    scopus 로고
    • Mating frequency and inclusive fitness in Drosophila melanogaster
    • 10.1086/523944, 18171147
    • Priest NK, Galloway LF, Roach DA. Mating frequency and inclusive fitness in Drosophila melanogaster. Am Nat 2008, 171:10-21. 10.1086/523944, 18171147.
    • (2008) Am Nat , vol.171 , pp. 10-21
    • Priest, N.K.1    Galloway, L.F.2    Roach, D.A.3
  • 24
    • 0013887172 scopus 로고
    • Delayed mating and the relationship of recombination to maternal age in Drosophila melanogaster
    • 1211042, 5919332
    • Redfield H. Delayed mating and the relationship of recombination to maternal age in Drosophila melanogaster. Genetics 1966, 53:593-607. 1211042, 5919332.
    • (1966) Genetics , vol.53 , pp. 593-607
    • Redfield, H.1
  • 25
    • 1542487552 scopus 로고
    • An effect of temperature and age on crossing-over in the first chromosome of Drosophila melanogaster
    • 10.1073/pnas.12.8.530, 1084661, 16587124
    • Stern C. An effect of temperature and age on crossing-over in the first chromosome of Drosophila melanogaster. Proc Natl Acad Sci USA 1926, 12:530-532. 10.1073/pnas.12.8.530, 1084661, 16587124.
    • (1926) Proc Natl Acad Sci USA , vol.12 , pp. 530-532
    • Stern, C.1
  • 26
    • 76749170346 scopus 로고    scopus 로고
    • PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice
    • 10.1126/science.1183439, 20044539
    • Baudat F, Buard J, Grey C, Fledel-Alon A, Ober C, Przeworski M, Coop G, de Massy B. PRDM9 is a major determinant of meiotic recombination hotspots in humans and mice. Science 2010, 327:836-840. 10.1126/science.1183439, 20044539.
    • (2010) Science , vol.327 , pp. 836-840
    • Baudat, F.1    Buard, J.2    Grey, C.3    Fledel-Alon, A.4    Ober, C.5    Przeworski, M.6    Coop, G.7    de Massy, B.8
  • 27
    • 26844482093 scopus 로고    scopus 로고
    • A fine-scale map of recombination rates and hotspots across the human genome
    • 10.1126/science.1117196, 16224025
    • Myers S, Bottolo L, Freeman C, McVean G, Donnelly P. A fine-scale map of recombination rates and hotspots across the human genome. Science 2005, 310:321-324. 10.1126/science.1117196, 16224025.
    • (2005) Science , vol.310 , pp. 321-324
    • Myers, S.1    Bottolo, L.2    Freeman, C.3    McVean, G.4    Donnelly, P.5
  • 28
    • 84866514151 scopus 로고    scopus 로고
    • Zinc finger binding motifs do not explain recombination rate variation within or between species of Drosophila
    • 10.1371/journal.pone.0045055, 3445564, 23028758
    • Heil CS, Noor MA. Zinc finger binding motifs do not explain recombination rate variation within or between species of Drosophila. PLoS One 2012, 7:e45055. 10.1371/journal.pone.0045055, 3445564, 23028758.
    • (2012) PLoS One , vol.7
    • Heil, C.S.1    Noor, M.A.2
  • 29
    • 84878532883 scopus 로고    scopus 로고
    • Fine-scale heterogeneity in crossover rate in the Garnet-Scalloped region of the Drosophila melanogaster X Chromosome
    • 10.1534/genetics.112.146746, 23410829
    • Singh ND, Stone EA, Aquadro CF, Clark AG. Fine-scale heterogeneity in crossover rate in the Garnet-Scalloped region of the Drosophila melanogaster X Chromosome. Genetics 2013, 194:375-387. 10.1534/genetics.112.146746, 23410829.
    • (2013) Genetics , vol.194 , pp. 375-387
    • Singh, N.D.1    Stone, E.A.2    Aquadro, C.F.3    Clark, A.G.4
  • 31
    • 0035345013 scopus 로고    scopus 로고
    • Meiotic recombination hot spots and cold spots
    • 10.1038/35072078, 11331902
    • Petes TD. Meiotic recombination hot spots and cold spots. Nat Rev Genet 2001, 2:360-369. 10.1038/35072078, 11331902.
    • (2001) Nat Rev Genet , vol.2 , pp. 360-369
    • Petes, T.D.1
  • 32
    • 77954216767 scopus 로고    scopus 로고
    • Nucleosome occupancy landscape and dynamics at mouse recombination hotspots
    • 10.1038/embor.2010.79, 2897116, 20508641
    • Getun IV, Wu ZK, Khalil AM, Bois PR. Nucleosome occupancy landscape and dynamics at mouse recombination hotspots. EMBO Rep 2010, 11:555-560. 10.1038/embor.2010.79, 2897116, 20508641.
    • (2010) EMBO Rep , vol.11 , pp. 555-560
    • Getun, I.V.1    Wu, Z.K.2    Khalil, A.M.3    Bois, P.R.4
  • 33
    • 79952295560 scopus 로고    scopus 로고
    • A hierarchical combination of factors shapes the genome-wide topography of yeast meiotic recombination initiation
    • 10.1016/j.cell.2011.02.009, 3063416, 21376234
    • Pan J, Sasaki M, Kniewel R, Murakami H, Blitzblau HG, Tischfield SE, Zhu X, Neale MJ, Jasin M, Socci ND, et al. A hierarchical combination of factors shapes the genome-wide topography of yeast meiotic recombination initiation. Cell 2011, 144:719-731. 10.1016/j.cell.2011.02.009, 3063416, 21376234.
    • (2011) Cell , vol.144 , pp. 719-731
    • Pan, J.1    Sasaki, M.2    Kniewel, R.3    Murakami, H.4    Blitzblau, H.G.5    Tischfield, S.E.6    Zhu, X.7    Neale, M.J.8    Jasin, M.9    Socci, N.D.10
  • 34
    • 0032694088 scopus 로고    scopus 로고
    • Control of meiotic recombination and gene expression in yeast by a simple repetitive DNA sequence that excludes nucleosomes
    • 84802, 10523654
    • Kirkpatrick DT, Wang YH, Dominska M, Griffith JD, Petes TD. Control of meiotic recombination and gene expression in yeast by a simple repetitive DNA sequence that excludes nucleosomes. Mol Cell Biol 1999, 19:7661-7671. 84802, 10523654.
    • (1999) Mol Cell Biol , vol.19 , pp. 7661-7671
    • Kirkpatrick, D.T.1    Wang, Y.H.2    Dominska, M.3    Griffith, J.D.4    Petes, T.D.5
  • 35
    • 34249804498 scopus 로고    scopus 로고
    • Using FlyAtlas to identify better Drosophila melanogaster models of human disease
    • 10.1038/ng2049, 17534367
    • Chintapalli VR, Wang J, Dow JA. Using FlyAtlas to identify better Drosophila melanogaster models of human disease. Nat Genet 2007, 39:715-720. 10.1038/ng2049, 17534367.
    • (2007) Nat Genet , vol.39 , pp. 715-720
    • Chintapalli, V.R.1    Wang, J.2    Dow, J.A.3
  • 36
    • 84855805956 scopus 로고    scopus 로고
    • Fine scale analysis of gene expression in Drosophila melanogaster gonads reveals Programmed cell death 4 promotes the differentiation of female germline stem cells
    • 10.1186/1471-213X-12-4, 3322342, 22252300
    • Cash AC, Andrews J. Fine scale analysis of gene expression in Drosophila melanogaster gonads reveals Programmed cell death 4 promotes the differentiation of female germline stem cells. BMC Dev Biol 2012, 12:4. 10.1186/1471-213X-12-4, 3322342, 22252300.
    • (2012) BMC Dev Biol , vol.12 , pp. 4
    • Cash, A.C.1    Andrews, J.2
  • 37
    • 84872519386 scopus 로고    scopus 로고
    • Sex-biased transcriptome evolution in Drosophila
    • 10.1093/gbe/evs093, 3514954, 23097318
    • Assis R, Zhou Q, Bachtrog D. Sex-biased transcriptome evolution in Drosophila. Genome Biol Evol 2012, 4:1189-1200. 10.1093/gbe/evs093, 3514954, 23097318.
    • (2012) Genome Biol Evol , vol.4 , pp. 1189-1200
    • Assis, R.1    Zhou, Q.2    Bachtrog, D.3
  • 38
    • 0346460960 scopus 로고    scopus 로고
    • Paucity of genes on the Drosophila X chromosome showing male-biased expression
    • 10.1126/science.1079190, 1363366, 12511656
    • Parisi M, Nuttall R, Naiman D, Bouffard G, Malley J, Andrews J, Eastman S, Oliver B. Paucity of genes on the Drosophila X chromosome showing male-biased expression. Science 2003, 299:697-700. 10.1126/science.1079190, 1363366, 12511656.
    • (2003) Science , vol.299 , pp. 697-700
    • Parisi, M.1    Nuttall, R.2    Naiman, D.3    Bouffard, G.4    Malley, J.5    Andrews, J.6    Eastman, S.7    Oliver, B.8
  • 39
    • 36049039511 scopus 로고    scopus 로고
    • Demasculinization of X chromosomes in the Drosophila genus
    • 10.1038/nature06330, 2386140, 17994090
    • Sturgill D, Zhang Y, Parisi M, Oliver B. Demasculinization of X chromosomes in the Drosophila genus. Nature 2007, 450:238-241. 10.1038/nature06330, 2386140, 17994090.
    • (2007) Nature , vol.450 , pp. 238-241
    • Sturgill, D.1    Zhang, Y.2    Parisi, M.3    Oliver, B.4
  • 40
    • 0037504137 scopus 로고    scopus 로고
    • Sex-dependent gene expression and evolution of the Drosophila transcriptome
    • 10.1126/science.1085881, 12805547
    • Ranz JM, Castillo-Davis CI, Meiklejohn CD, Hartl DL. Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science 2003, 300:1742-1745. 10.1126/science.1085881, 12805547.
    • (2003) Science , vol.300 , pp. 1742-1745
    • Ranz, J.M.1    Castillo-Davis, C.I.2    Meiklejohn, C.D.3    Hartl, D.L.4
  • 41
    • 84869078471 scopus 로고    scopus 로고
    • The rapid evolution of X-linked male-biased gene expression and the large-X effect in Drosophila yakuba, D. santomea, and their hybrids
    • 10.1093/molbev/mss190, 22844069
    • Llopart A. The rapid evolution of X-linked male-biased gene expression and the large-X effect in Drosophila yakuba, D. santomea, and their hybrids. Mol Biol Evol 2012, 29:3873-3886. 10.1093/molbev/mss190, 22844069.
    • (2012) Mol Biol Evol , vol.29 , pp. 3873-3886
    • Llopart, A.1
  • 42
    • 84863550891 scopus 로고    scopus 로고
    • Disentangling the relationship between sex-biased gene expression and X-linkage
    • 10.1101/gr.132100.111, 3396367, 22499666
    • Meisel RP, Malone JH, Clark AG. Disentangling the relationship between sex-biased gene expression and X-linkage. Genome Res 2012, 22:1255-1265. 10.1101/gr.132100.111, 3396367, 22499666.
    • (2012) Genome Res , vol.22 , pp. 1255-1265
    • Meisel, R.P.1    Malone, J.H.2    Clark, A.G.3
  • 43
    • 84873576857 scopus 로고    scopus 로고
    • Little evidence for demasculinization of the Drosophila X chromosome among genes expressed in the male germline
    • 3490416, 22975718
    • Meiklejohn CD, Presgraves DC. Little evidence for demasculinization of the Drosophila X chromosome among genes expressed in the male germline. Genome Biol Evol 2012, 4:1007-1016. 3490416, 22975718.
    • (2012) Genome Biol Evol , vol.4 , pp. 1007-1016
    • Meiklejohn, C.D.1    Presgraves, D.C.2
  • 44
    • 0003328368 scopus 로고    scopus 로고
    • Evidence for large domains of similarly expressed genes in the Drosophila genome
    • 10.1186/1475-4924-1-5, 117248, 12144710
    • Spellman PT, Rubin GM. Evidence for large domains of similarly expressed genes in the Drosophila genome. J Biol 2002, 1:5. 10.1186/1475-4924-1-5, 117248, 12144710.
    • (2002) J Biol , vol.1 , pp. 5
    • Spellman, P.T.1    Rubin, G.M.2
  • 45
    • 0037069672 scopus 로고    scopus 로고
    • Large clusters of co-expressed genes in the Drosophila genome
    • 10.1038/nature01216, 12478293
    • Boutanaev AM, Kalmykova AI, Shevelyov YY, Nurminsky DI. Large clusters of co-expressed genes in the Drosophila genome. Nature 2002, 420:666-669. 10.1038/nature01216, 12478293.
    • (2002) Nature , vol.420 , pp. 666-669
    • Boutanaev, A.M.1    Kalmykova, A.I.2    Shevelyov, Y.Y.3    Nurminsky, D.I.4
  • 46
    • 79952698915 scopus 로고    scopus 로고
    • Support for multiple classes of local expression clusters in Drosophila melanogaster, but no evidence for gene order conservation
    • 10.1186/gb-2011-12-3-r23, 3129673, 21414197
    • Weber CC, Hurst LD. Support for multiple classes of local expression clusters in Drosophila melanogaster, but no evidence for gene order conservation. Genome Biol 2011, 12:R23. 10.1186/gb-2011-12-3-r23, 3129673, 21414197.
    • (2011) Genome Biol , vol.12
    • Weber, C.C.1    Hurst, L.D.2
  • 48
    • 33846983276 scopus 로고    scopus 로고
    • Polycomb/Trithorax response elements and epigenetic memory of cell identity
    • 10.1242/dev.02723, 17185323
    • Ringrose L, Paro R. Polycomb/Trithorax response elements and epigenetic memory of cell identity. Development 2007, 134:223-232. 10.1242/dev.02723, 17185323.
    • (2007) Development , vol.134 , pp. 223-232
    • Ringrose, L.1    Paro, R.2
  • 49
    • 33745727059 scopus 로고    scopus 로고
    • Nuclear bodies in the Drosophila germinal vesicle
    • 10.1007/s10577-006-1062-5, 16821140
    • Liu JL, Buszczak M, Gall JG. Nuclear bodies in the Drosophila germinal vesicle. Chromosome Res 2006, 14:465-475. 10.1007/s10577-006-1062-5, 16821140.
    • (2006) Chromosome Res , vol.14 , pp. 465-475
    • Liu, J.L.1    Buszczak, M.2    Gall, J.G.3
  • 50
    • 33747818203 scopus 로고    scopus 로고
    • Effects of trans-acting genetic modifiers on meiotic recombination across the a1-sh2 interval of maize
    • 10.1534/genetics.105.049270, 1569796, 16816431
    • Yandeau-Nelson MD, Nikolau BJ, Schnable PS. Effects of trans-acting genetic modifiers on meiotic recombination across the a1-sh2 interval of maize. Genetics 2006, 174:101-112. 10.1534/genetics.105.049270, 1569796, 16816431.
    • (2006) Genetics , vol.174 , pp. 101-112
    • Yandeau-Nelson, M.D.1    Nikolau, B.J.2    Schnable, P.S.3
  • 51
    • 0036743551 scopus 로고    scopus 로고
    • Genetic control of mammalian meiotic recombination. I. Variation in exchange frequencies among males from inbred mouse strains
    • 1462263, 12242241
    • Koehler KE, Cherry JP, Lynn A, Hunt PA, Hassold TJ. Genetic control of mammalian meiotic recombination. I. Variation in exchange frequencies among males from inbred mouse strains. Genetics 2002, 162:297-306. 1462263, 12242241.
    • (2002) Genetics , vol.162 , pp. 297-306
    • Koehler, K.E.1    Cherry, J.P.2    Lynn, A.3    Hunt, P.A.4    Hassold, T.J.5
  • 52
    • 61349120206 scopus 로고    scopus 로고
    • Genome-wide control of the distribution of meiotic recombination
    • 10.1371/journal.pbio.1000035, 2642883, 19226188
    • Grey C, Baudat F, de Massy B. Genome-wide control of the distribution of meiotic recombination. PLoS Biol 2009, 7:e35. 10.1371/journal.pbio.1000035, 2642883, 19226188.
    • (2009) PLoS Biol , vol.7
    • Grey, C.1    Baudat, F.2    de Massy, B.3
  • 53
    • 0036859969 scopus 로고    scopus 로고
    • Variation in chiasma frequency among eight accessions of Arabidopsis thaliana
    • 1462347, 12454084
    • Sanchez-Moran E, Armstrong SJ, Santos JL, Franklin FCH, Jones GH. Variation in chiasma frequency among eight accessions of Arabidopsis thaliana. Genetics 2002, 162:1415-1422. 1462347, 12454084.
    • (2002) Genetics , vol.162 , pp. 1415-1422
    • Sanchez-Moran, E.1    Armstrong, S.J.2    Santos, J.L.3    Franklin, F.C.H.4    Jones, G.H.5
  • 54
    • 78651495648 scopus 로고    scopus 로고
    • Extensive recombination rate variation in the house mouse species complex inferred from genetic linkage maps
    • 10.1101/gr.111252.110, 3012918, 20978138
    • Dumont BL, White MA, Steffy B, Wiltshire T, Payseur BA. Extensive recombination rate variation in the house mouse species complex inferred from genetic linkage maps. Genome Res 2011, 21:114-125. 10.1101/gr.111252.110, 3012918, 20978138.
    • (2011) Genome Res , vol.21 , pp. 114-125
    • Dumont, B.L.1    White, M.A.2    Steffy, B.3    Wiltshire, T.4    Payseur, B.A.5
  • 55
    • 37249005203 scopus 로고    scopus 로고
    • Using crossover breakpoints in recombinant inbred lines to identify quantitative trait loci controlling the global recombination frequency
    • 10.1534/genetics.107.080622, 2147985, 17947409
    • Esch E, Szymaniak JM, Yates H, Pawlowski WP, Buckler ES. Using crossover breakpoints in recombinant inbred lines to identify quantitative trait loci controlling the global recombination frequency. Genetics 2007, 177:1851-1858. 10.1534/genetics.107.080622, 2147985, 17947409.
    • (2007) Genetics , vol.177 , pp. 1851-1858
    • Esch, E.1    Szymaniak, J.M.2    Yates, H.3    Pawlowski, W.P.4    Buckler, E.S.5
  • 56
    • 0015304311 scopus 로고
    • Genetic change of recombination value in Drosophila melanogaster. II. Simulated natural selection
    • 1212747, 4623520
    • Kidwell MG. Genetic change of recombination value in Drosophila melanogaster. II. Simulated natural selection. Genetics 1972, 70:433-443. 1212747, 4623520.
    • (1972) Genetics , vol.70 , pp. 433-443
    • Kidwell, M.G.1
  • 57
    • 0022981966 scopus 로고
    • The organization of genetic variation for recombination in Drosophila melanogaster
    • 1202955, 3095185
    • Brooks LD, Marks RW. The organization of genetic variation for recombination in Drosophila melanogaster. Genetics 1986, 114:525-547. 1202955, 3095185.
    • (1986) Genetics , vol.114 , pp. 525-547
    • Brooks, L.D.1    Marks, R.W.2
  • 58
    • 0016191444 scopus 로고
    • Selection for reduced crossing over in Drosophila melanogaster
    • 1213078, 4208855
    • Abdullah NF, Charlesworth B. Selection for reduced crossing over in Drosophila melanogaster. Genetics 1974, 76:447-451. 1213078, 4208855.
    • (1974) Genetics , vol.76 , pp. 447-451
    • Abdullah, N.F.1    Charlesworth, B.2
  • 59
    • 0028856311 scopus 로고
    • Comparative recombination distances among Zea mays L. inbreds, wide crosses and interspecific hybrids
    • 1206888, 8601495
    • Williams CG, Goodman MM, Stuber CW. Comparative recombination distances among Zea mays L. inbreds, wide crosses and interspecific hybrids. Genetics 1995, 141:1573-1581. 1206888, 8601495.
    • (1995) Genetics , vol.141 , pp. 1573-1581
    • Williams, C.G.1    Goodman, M.M.2    Stuber, C.W.3
  • 60
    • 33646130166 scopus 로고    scopus 로고
    • Polymorphism in the activity of human crossover hotspots independent of local DNA sequence variation
    • 10.1093/hmg/ddl063, 16543360
    • Neumann R, Jeffreys AJ. Polymorphism in the activity of human crossover hotspots independent of local DNA sequence variation. Hum Mol Genet 2006, 15:1401-1411. 10.1093/hmg/ddl063, 16543360.
    • (2006) Hum Mol Genet , vol.15 , pp. 1401-1411
    • Neumann, R.1    Jeffreys, A.J.2
  • 61
    • 0346100688 scopus 로고    scopus 로고
    • On the evolutionary advantage of fitness-associated recombination
    • 1462912, 14704195
    • Hadany L, Beker T. On the evolutionary advantage of fitness-associated recombination. Genetics 2003, 165:2167-2179. 1462912, 14704195.
    • (2003) Genetics , vol.165 , pp. 2167-2179
    • Hadany, L.1    Beker, T.2
  • 62
    • 0042740677 scopus 로고    scopus 로고
    • Fitness-associated recombination on rugged adaptive landscapes
    • 10.1046/j.1420-9101.2003.00586.x, 14635901
    • Hadany L, Beker T. Fitness-associated recombination on rugged adaptive landscapes. J Evol Biol 2003, 16:862-870. 10.1046/j.1420-9101.2003.00586.x, 14635901.
    • (2003) J Evol Biol , vol.16 , pp. 862-870
    • Hadany, L.1    Beker, T.2
  • 63
    • 31544439595 scopus 로고    scopus 로고
    • The evolution of plastic recombination
    • 10.1534/genetics.105.041301, 1456799, 16020791
    • Agrawal AF, Hadany L, Otto SP. The evolution of plastic recombination. Genetics 2005, 171:803-812. 10.1534/genetics.105.041301, 1456799, 16020791.
    • (2005) Genetics , vol.171 , pp. 803-812
    • Agrawal, A.F.1    Hadany, L.2    Otto, S.P.3
  • 64
    • 78651161274 scopus 로고
    • Use of a serial portable apparatus for electrolytic sharpening of surgical instruments in the preparation of metal microelectrodes
    • Kalistratov GF, Bashkirov AA. Use of a serial portable apparatus for electrolytic sharpening of surgical instruments in the preparation of metal microelectrodes. Biull Eksp Biol Med 1964, 58:122-123.
    • (1964) Biull Eksp Biol Med , vol.58 , pp. 122-123
    • Kalistratov, G.F.1    Bashkirov, A.A.2
  • 67
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • 10.1186/gb-2010-11-8-r86, 2945788, 20738864
    • Goecks J, Nekrutenko A, Taylor J. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol 2010, 11:R86. 10.1186/gb-2010-11-8-r86, 2945788, 20738864.
    • (2010) Genome Biol , vol.11
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 68
    • 80051941094 scopus 로고    scopus 로고
    • Identification of novel transcripts in annotated genomes using RNA-Seq
    • 10.1093/bioinformatics/btr355, 21697122
    • Roberts A, Pimentel H, Trapnell C, Pachter L. Identification of novel transcripts in annotated genomes using RNA-Seq. Bioinformatics 2011, 27:2325-2329. 10.1093/bioinformatics/btr355, 21697122.
    • (2011) Bioinformatics , vol.27 , pp. 2325-2329
    • Roberts, A.1    Pimentel, H.2    Trapnell, C.3    Pachter, L.4
  • 71
    • 84888056285 scopus 로고    scopus 로고
    • Mosaik-Aligner http://code.google.com/p/mosaik-aligner/.
    • Mosaik-Aligner
  • 72
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • da Huang W, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 2009, 4:44-57.
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • da Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.