-
1
-
-
6944242766
-
Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux
-
F. Burki, and H. Kaessmann Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux Nat. Genet. 36 2004 1061 1063
-
(2004)
Nat. Genet.
, vol.36
, pp. 1061-1063
-
-
Burki, F.1
Kaessmann, H.2
-
2
-
-
3543044987
-
An X-to-autosome retrogene is required for spermatogenesis in mice
-
J. Bradley, A. Baltus, H. Skaletsky, M. Royce-Tolland, K. Dewar, and D.C. Page An X-to-autosome retrogene is required for spermatogenesis in mice Nat. Genet. 36 2004 872 876
-
(2004)
Nat. Genet.
, vol.36
, pp. 872-876
-
-
Bradley, J.1
Baltus, A.2
Skaletsky, H.3
Royce-Tolland, M.4
Dewar, K.5
Page, D.C.6
-
3
-
-
0036544871
-
Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey
-
J. Zhang, Y.P. Zhang, and H.F. Rosenberg Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey Nat. Genet. 30 2002 411 415
-
(2002)
Nat. Genet.
, vol.30
, pp. 411-415
-
-
Zhang, J.1
Zhang, Y.P.2
Rosenberg, H.F.3
-
5
-
-
0242354129
-
The origin of new genes: Glimpses from the young and old
-
M. Long, E. Betran, K. Thornton, and W. Wang The origin of new genes: glimpses from the young and old Nat. Rev. Genet. 4 2003 865 875
-
(2003)
Nat. Rev. Genet.
, vol.4
, pp. 865-875
-
-
Long, M.1
Betran, E.2
Thornton, K.3
Wang, W.4
-
7
-
-
50649097020
-
On the origin of new genes in Drosophila
-
doi:gr.076588.108, pii:10.1101/gr.076588.108
-
Q. Zhou, G. Zhang, Y. Zhang, S. Xu, R. Zhao, Z. Zhan, X. Li, Y. Ding, S. Yang, and W. Wang On the origin of new genes in Drosophila Genome Res. 18 2008 1446 1455 doi:gr.076588.108, pii:10.1101/gr.076588.108
-
(2008)
Genome Res.
, vol.18
, pp. 1446-1455
-
-
Zhou, Q.1
Zhang, G.2
Zhang, Y.3
Xu, S.4
Zhao, R.5
Zhan, Z.6
Li, X.7
Ding, Y.8
Yang, S.9
Wang, W.10
-
8
-
-
0025864962
-
Retroposons-seeds of evolution
-
J. Brosius Retroposons-seeds of evolution Science 251 1991 753
-
(1991)
Science
, vol.251
, pp. 753
-
-
Brosius, J.1
-
9
-
-
57749177443
-
RNA-based gene duplication: Mechanistic and evolutionary insights
-
doi: nrg2487, pii:10.1038/nrg2487
-
H. Kaessmann, N. Vinckenbosch, and M. Long RNA-based gene duplication: mechanistic and evolutionary insights Nat. Rev. Genet. 10 2009 19 31 doi: nrg2487, pii:10.1038/nrg2487
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 19-31
-
-
Kaessmann, H.1
Vinckenbosch, N.2
Long, M.3
-
10
-
-
78649231644
-
Origins, evolution, and phenotypic impact of new genes
-
doi: gr.101386.109, pii:10.1101/gr.101386.109
-
H. Kaessmann Origins, evolution, and phenotypic impact of new genes Genome Res. 20 2010 1313 1326 doi: gr.101386.109, pii:10.1101/gr.101386.109
-
(2010)
Genome Res.
, vol.20
, pp. 1313-1326
-
-
Kaessmann, H.1
-
11
-
-
68949199595
-
Evolutionary origin and functions of retrogene introns
-
doi: msp125, pii:10.1093/molbev/msp125
-
M. Fablet, M. Bueno, L. Potrzebowski, and H. Kaessmann Evolutionary origin and functions of retrogene introns Mol. Biol. Evol. 26 2009 2147 2156 doi: msp125, pii:10.1093/molbev/msp125
-
(2009)
Mol. Biol. Evol.
, vol.26
, pp. 2147-2156
-
-
Fablet, M.1
Bueno, M.2
Potrzebowski, L.3
Kaessmann, H.4
-
12
-
-
0042208412
-
Dntf-2r, a young Drosophila retroposed gene with specific male expression under positive Darwinian selection
-
E. Betran, and M. Long Dntf-2r, a young Drosophila retroposed gene with specific male expression under positive Darwinian selection Genetics 164 2003 977 988
-
(2003)
Genetics
, vol.164
, pp. 977-988
-
-
Betran, E.1
Long, M.2
-
13
-
-
34147128526
-
Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila
-
Y. Bai, C. Casola, C. Feschotte, and E. Betran Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila Genome Biol. 8 2007 R11
-
(2007)
Genome Biol.
, vol.8
, pp. 11
-
-
Bai, Y.1
Casola, C.2
Feschotte, C.3
Betran, E.4
-
14
-
-
1642475221
-
Extensive gene traffic on the mammalian X chromosome
-
J.J. Emerson, H. Kaessmann, E. Betran, and M. Long Extensive gene traffic on the mammalian X chromosome Science 303 2004 537 540
-
(2004)
Science
, vol.303
, pp. 537-540
-
-
Emerson, J.J.1
Kaessmann, H.2
Betran, E.3
Long, M.4
-
15
-
-
27844557002
-
Emergence of young human genes after a burst of retroposition in primates
-
A.C. Marques, I. Dupanloup, N. Vinckenbosch, A. Reymond, and H. Kaessmann Emergence of young human genes after a burst of retroposition in primates PLoS Biol. 3 2005 e357
-
(2005)
PLoS Biol.
, vol.3
, pp. 357
-
-
Marques, A.C.1
Dupanloup, I.2
Vinckenbosch, N.3
Reymond, A.4
Kaessmann, H.5
-
16
-
-
35648987151
-
Analysis of the role of retrotransposition in gene evolution in vertebrates
-
Z. Yu, D. Morais, M. Ivanga, and P.M. Harrison Analysis of the role of retrotransposition in gene evolution in vertebrates BMC Bioinform. 8 2007 308
-
(2007)
BMC Bioinform.
, vol.8
, pp. 308
-
-
Yu, Z.1
Morais, D.2
Ivanga, M.3
Harrison, P.M.4
-
17
-
-
56449118064
-
Retrocopy contributions to the evolution of the human genome
-
doi: 1471-2164-9-466, pii:10.1186/1471-2164-9-466
-
R. Baertsch, M. Diekhans, W.J. Kent, D. Haussler, and J. Brosius Retrocopy contributions to the evolution of the human genome BMC Genomics 9 2008 466 doi: 1471-2164-9-466, pii:10.1186/1471-2164-9-466
-
(2008)
BMC Genomics
, vol.9
, pp. 466
-
-
Baertsch, R.1
Diekhans, M.2
Kent, W.J.3
Haussler, D.4
Brosius, J.5
-
18
-
-
84873487706
-
Gene copy-number polymorphism caused by retrotransposition in humans
-
doi: 10.1371/journal.pgen.1003242, pii:PGENETICS-D-12-01322
-
D.R. Schrider, F.C. Navarro, P.A. Galante, R.B. Parmigiani, A.A. Camargo, M.W. Hahn, and S.J. de Souza Gene copy-number polymorphism caused by retrotransposition in humans PLoS Genet. 9 2013 e1003242 doi: 10.1371/journal.pgen.1003242, pii:PGENETICS-D-12-01322
-
(2013)
PLoS Genet.
, vol.9
, pp. 1003242
-
-
Schrider, D.R.1
Navarro, F.C.2
Galante, P.A.3
Parmigiani, R.B.4
Camargo, A.A.5
Hahn, M.W.6
De Souza, S.J.7
-
19
-
-
69249097407
-
An expressed fgf4 retrogene is associated with breed-defining chondrodysplasia in domestic dogs
-
doi: 1173275, pii:10.1126/science.1173275
-
H.G. Parker, B.M. VonHoldt, P. Quignon, E.H. Margulies, S. Shao, D.S. Mosher, T.C. Spady, A. Elkahloun, M. Cargill, and P.G. Jones An expressed fgf4 retrogene is associated with breed-defining chondrodysplasia in domestic dogs Science 325 2009 995 998 doi: 1173275, pii:10.1126/science.1173275
-
(2009)
Science
, vol.325
, pp. 995-998
-
-
Parker, H.G.1
Vonholdt, B.M.2
Quignon, P.3
Margulies, E.H.4
Shao, S.5
Mosher, D.S.6
Spady, T.C.7
Elkahloun, A.8
Cargill, M.9
Jones, P.G.10
-
20
-
-
69249139860
-
Genetics
-
doi: 325/5943/958, pii:10.1126/science.1178487
-
H. Kaessmann Genetics More than just a copy. Science 325 2009 958 959 doi: 325/5943/958, pii:10.1126/science.1178487
-
(2009)
More Than Just A Copy. Science
, vol.325
, pp. 958-959
-
-
Kaessmann, H.1
-
21
-
-
78951474491
-
Retrogenes reveal the direction of sex-chromosome evolution in mosquitoes
-
doi: genetics.110.118794, pii:10.1534/genetics.110.118794
-
M.A. Toups, and M.W. Hahn Retrogenes reveal the direction of sex-chromosome evolution in mosquitoes Genetics 186 2010 763 766 doi: genetics.110.118794, pii:10.1534/genetics.110.118794
-
(2010)
Genetics
, vol.186
, pp. 763-766
-
-
Toups, M.A.1
Hahn, M.W.2
-
22
-
-
0036906987
-
Retroposed new genes out of the X in Drosophila
-
E. Betran, K. Thornton, and M. Long Retroposed new genes out of the X in Drosophila Genome Res. 12 2002 1854 1859
-
(2002)
Genome Res.
, vol.12
, pp. 1854-1859
-
-
Betran, E.1
Thornton, K.2
Long, M.3
-
23
-
-
83055168359
-
Genome-wide analysis of retrogene polymorphisms in Drosophila melanogaster
-
doi: 21/12/2087, pii:10.1101/gr.116434.110
-
D.R. Schrider, K. Stevens, C.M. Cardeno, C.H. Langley, and M.W. Hahn Genome-wide analysis of retrogene polymorphisms in Drosophila melanogaster Genome Res. 21 2011 2087 2095 doi: 21/12/2087, pii:10.1101/gr.116434.110
-
(2011)
Genome Res.
, vol.21
, pp. 2087-2095
-
-
Schrider, D.R.1
Stevens, K.2
Cardeno, C.M.3
Langley, C.H.4
Hahn, M.W.5
-
24
-
-
0346752110
-
Millions of years of evolution preserved: A comprehensive catalog of the processed pseudogenes in the human genome
-
Z. Zhang, P.M. Harrison, Y. Liu, and M. Gerstein Millions of years of evolution preserved: a comprehensive catalog of the processed pseudogenes in the human genome Genome Res. 13 2003 2541 2558
-
(2003)
Genome Res.
, vol.13
, pp. 2541-2558
-
-
Zhang, Z.1
Harrison, P.M.2
Liu, Y.3
Gerstein, M.4
-
25
-
-
1542682570
-
Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates
-
K. Ohshima, M. Hattori, T. Yada, T. Gojobori, Y. Sakaki, and N. Okada Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates Genome Biol. 4 2003 R74
-
(2003)
Genome Biol.
, vol.4
, pp. 74
-
-
Ohshima, K.1
Hattori, M.2
Yada, T.3
Gojobori, T.4
Sakaki, Y.5
Okada, N.6
-
26
-
-
0034079713
-
Human LINE retrotransposons generate processed pseudogenes
-
C. Esnault, J. Maestre, and T. Heidmann Human LINE retrotransposons generate processed pseudogenes Nat. Genet. 24 2000 363 367
-
(2000)
Nat. Genet.
, vol.24
, pp. 363-367
-
-
Esnault, C.1
Maestre, J.2
Heidmann, T.3
-
27
-
-
7144223296
-
Gene action in the X-chromosome of the mouse (Mus musculus L.)
-
M.F. Lyon Gene action in the X-chromosome of the mouse (Mus musculus L.) Nature 190 1961 372 373
-
(1961)
Nature
, vol.190
, pp. 372-373
-
-
Lyon, M.F.1
-
28
-
-
63449122253
-
Burst of young retrogenes and independent retrogene formation in mammals
-
doi: 10.1371/journal.pone.0005040
-
D. Pan, and L. Zhang Burst of young retrogenes and independent retrogene formation in mammals PLoS ONE 4 2009 e5040 doi: 10.1371/journal.pone.0005040
-
(2009)
PLoS ONE
, vol.4
, pp. 5040
-
-
Pan, D.1
Zhang, L.2
-
29
-
-
0346243805
-
Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios
-
doi: 10.1126/science.1088821, pii:302/5652/1960
-
A.G. Clark, S. Glanowski, R. Nielsen, P.D. Thomas, A. Kejariwal, M.A. Todd, D.M. Tanenbaum, D. Civello, F. Lu, and B. Murphy Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios Science 302 2003 1960 1963 doi: 10.1126/science.1088821, pii:302/5652/1960
-
(2003)
Science
, vol.302
, pp. 1960-1963
-
-
Clark, A.G.1
Glanowski, S.2
Nielsen, R.3
Thomas, P.D.4
Kejariwal, A.5
Todd, M.A.6
Tanenbaum, D.M.7
Civello, D.8
Lu, F.9
Murphy, B.10
-
30
-
-
11144331051
-
Accelerated evolution of nervous system genes in the origin of Homo sapiens
-
doi: S0092867404011432, pii:10.1016/j.cell.2004.11.040
-
S. Dorus, E.J. Vallender, P.D. Evans, J.R. Anderson, S.L. Gilbert, M. Mahowald, G.J. Wyckoff, C.M. Malcom, and B.T. Lahn Accelerated evolution of nervous system genes in the origin of Homo sapiens Cell 119 2004 1027 1040 doi: S0092867404011432, pii:10.1016/j.cell.2004.11.040
-
(2004)
Cell
, vol.119
, pp. 1027-1040
-
-
Dorus, S.1
Vallender, E.J.2
Evans, P.D.3
Anderson, J.R.4
Gilbert, S.L.5
Mahowald, M.6
Wyckoff, G.J.7
Malcom, C.M.8
Lahn, B.T.9
-
31
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
doi: 10.1038/35057062
-
E.S. Lander, L.M. Linton, B. Birren, C. Nusbaum, M.C. Zody, J. Baldwin, K. Devon, K. Dewar, M. Doyle, and W. FitzHugh Initial sequencing and analysis of the human genome Nature 409 2001 860 921 doi: 10.1038/35057062
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
Fitzhugh, W.10
-
32
-
-
24344500211
-
The Chimpanzee Sequencing and Analysis Consortium
-
doi: nature04072, pii: 10.1038/nature04072
-
(2005) The Chimpanzee Sequencing and Analysis Consortium. Nature 437, 69-87, doi: nature04072, pii: 10.1038/nature04072.
-
(2005)
Nature
, vol.437
, pp. 69-87
-
-
-
33
-
-
79251553493
-
Comparative and demographic analysis of orangutan genomes
-
doi: nature04072, pii:10.1038/nature04072
-
D.P. Locke, L.W. Hillier, W.C. Warren, K.C. Worley, L.V. Nazareth, D.M. Muzny, S.P. Yang, Z. Wang, A.T. Chinwalla, and P. Minx Comparative and demographic analysis of orangutan genomes Nature 469 2011 529 533 doi: nature04072, pii:10.1038/nature04072
-
(2011)
Nature
, vol.469
, pp. 529-533
-
-
Locke, D.P.1
Hillier, L.W.2
Warren, W.C.3
Worley, K.C.4
Nazareth, L.V.5
Muzny, D.M.6
Yang, S.P.7
Wang, Z.8
Chinwalla, A.T.9
Minx, P.10
-
34
-
-
34247352040
-
Evolutionary and biomedical insights from the rhesus macaque genome
-
doi: 316/5822/222, pii:10.1126/science.1139247
-
R.A. Gibbs, J. Rogers, M.G. Katze, R. Bumgarner, G.M. Weinstock, E.R. Mardis, K.A. Remington, R.L. Strausberg, J.C. Venter, and R.K. Wilson Evolutionary and biomedical insights from the rhesus macaque genome Science 316 2007 222 234 doi: 316/5822/222, pii:10.1126/science.1139247
-
(2007)
Science
, vol.316
, pp. 222-234
-
-
Gibbs, R.A.1
Rogers, J.2
Katze, M.G.3
Bumgarner, R.4
Weinstock, G.M.5
Mardis, E.R.6
Remington, K.A.7
Strausberg, R.L.8
Venter, J.C.9
Wilson, R.K.10
-
35
-
-
18444402182
-
The ensemble genome database project
-
T. Hubbard, D. Barker, E. Birney, G. Cameron, Y. Chen, L. Clark, T. Cox, J. Cuff, V. Curwen, and T. Down The ensemble genome database project Nucleic Acids Res. 30 2002 38 41
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 38-41
-
-
Hubbard, T.1
Barker, D.2
Birney, E.3
Cameron, G.4
Chen, Y.5
Clark, L.6
Cox, T.7
Cuff, J.8
Curwen, V.9
Down, T.10
-
36
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
37
-
-
0023989064
-
Improved tools for biological sequence comparison
-
W.R. Pearson, and D.J. Lipman Improved tools for biological sequence comparison Proc. Natl. Acad. Sci. USA 85 1988 2444 2448
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
38
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Z. Yang PAML: a program package for phylogenetic analysis by maximum likelihood Comput. Appl. Biosci. 13 1997 555 556
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
40
-
-
79960136837
-
Evolutionary patterns of RNA-based duplication in non-mammalian chordates
-
doi: 10.1371/journal.pone.0021466, pii:PONE-D-11-01810
-
M. Chen, M. Zou, B. Fu, X. Li, M.D. Vibranovski, X. Gan, D. Wang, W. Wang, M. Long, and S. He Evolutionary patterns of RNA-based duplication in non-mammalian chordates PLoS ONE 6 2011 e21466 doi: 10.1371/journal.pone. 0021466, pii:PONE-D-11-01810
-
(2011)
PLoS ONE
, vol.6
, pp. 21466
-
-
Chen, M.1
Zou, M.2
Fu, B.3
Li, X.4
Vibranovski, M.D.5
Gan, X.6
Wang, D.7
Wang, W.8
Long, M.9
He, S.10
-
41
-
-
33646591222
-
There is no universal molecular clock for invertebrates, but rate variation does not scale with body size
-
doi: 0510251103, pii:10.1073/pnas.0510251103
-
J.A. Thomas, J.J. Welch, M. Woolfit, and L. Bromham There is no universal molecular clock for invertebrates, but rate variation does not scale with body size Proc. Natl. Acad. Sci. USA 103 2006 7366 7371 doi: 0510251103, pii:10.1073/pnas.0510251103
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 7366-7371
-
-
Thomas, J.A.1
Welch, J.J.2
Woolfit, M.3
Bromham, L.4
-
42
-
-
33751381461
-
TimeTree: A public knowledge-base of divergence times among organisms
-
doi: btl505, pii:10.1093/bioinformatics/btl505
-
S.B. Hedges, J. Dudley, and S. Kumar TimeTree: a public knowledge-base of divergence times among organisms Bioinformatics 22 2006 2971 2972 doi: btl505, pii:10.1093/bioinformatics/btl505
-
(2006)
Bioinformatics
, vol.22
, pp. 2971-2972
-
-
Hedges, S.B.1
Dudley, J.2
Kumar, S.3
-
43
-
-
33744734662
-
Origination and evolution of a human-specific transmembrane protein gene, c1orf37-dup
-
doi: ddl109, pii:10.1093/hmg/ddl109
-
H. Yu, H. Jiang, Q. Zhou, J. Yang, Y. Cun, B. Su, C. Xiao, and W. Wang Origination and evolution of a human-specific transmembrane protein gene, c1orf37-dup Hum. Mol. Genet. 15 2006 1870 1875 doi: ddl109, pii:10.1093/hmg/ ddl109
-
(2006)
Hum. Mol. Genet.
, vol.15
, pp. 1870-1875
-
-
Yu, H.1
Jiang, H.2
Zhou, Q.3
Yang, J.4
Cun, Y.5
Su, B.6
Xiao, C.7
Wang, W.8
-
44
-
-
0029856377
-
High intrinsic rate of DNA loss in Drosophila
-
doi: 10.1038/384346a0
-
D.A. Petrov, E.R. Lozovskaya, and D.L. Hartl High intrinsic rate of DNA loss in Drosophila Nature 384 1996 346 349 doi: 10.1038/384346a0
-
(1996)
Nature
, vol.384
, pp. 346-349
-
-
Petrov, D.A.1
Lozovskaya, E.R.2
Hartl, D.L.3
-
45
-
-
0025910757
-
Processed pseudogenes in Drosophila
-
doi: 10.1098/rspb.1991.0064
-
P. Jeffs, and M. Ashburner Processed pseudogenes in Drosophila Proc. Biol. Sci. 244 1991 151 159 doi: 10.1098/rspb.1991.0064
-
(1991)
Proc. Biol. Sci.
, vol.244
, pp. 151-159
-
-
Jeffs, P.1
Ashburner, M.2
-
46
-
-
1642473033
-
Comparative analysis of processed pseudogenes in the mouse and human genomes
-
Doi: S0168-9525(03)00344-5, pii:10.1016/j.tig.2003.12.005
-
Z. Zhang, N. Carriero, and M. Gerstein Comparative analysis of processed pseudogenes in the mouse and human genomes Trends Genet. 20 2004 62 67 Doi: S0168-9525(03)00344-5, pii:10.1016/j.tig.2003.12.005
-
(2004)
Trends Genet.
, vol.20
, pp. 62-67
-
-
Zhang, Z.1
Carriero, N.2
Gerstein, M.3
-
47
-
-
0036897666
-
Slow molecular clocks in Old World monkeys, apes, and humans
-
S. Yi, D.L. Ellsworth, and W.H. Li Slow molecular clocks in Old World monkeys, apes, and humans Mol. Biol. Evol. 19 2002 2191 2198
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 2191-2198
-
-
Yi, S.1
Ellsworth, D.L.2
Li, W.H.3
-
48
-
-
0016669094
-
Evolution at two levels in humans and chimpanzees
-
M.C. King, and A.C. Wilson Evolution at two levels in humans and chimpanzees Science 188 1975 107 116
-
(1975)
Science
, vol.188
, pp. 107-116
-
-
King, M.C.1
Wilson, A.C.2
-
49
-
-
0000730822
-
Two types of molecular evolution. Evidence from studies of interspecific hybridization
-
A.C. Wilson, L.R. Maxson, and V.M. Sarich Two types of molecular evolution. Evidence from studies of interspecific hybridization Proc. Natl. Acad. Sci. USA 71 1974 2843 2847
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 2843-2847
-
-
Wilson, A.C.1
Maxson, L.R.2
Sarich, V.M.3
-
50
-
-
27144491328
-
Adaptive evolution of non-coding DNA in Drosophila
-
Doi: 10.1038/nature04107
-
P. Andolfatto Adaptive evolution of non-coding DNA in Drosophila Nature 437 2005 1149 1152 Doi: 10.1038/nature04107
-
(2005)
Nature
, vol.437
, pp. 1149-1152
-
-
Andolfatto, P.1
-
51
-
-
34548346860
-
Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution
-
doi: 10.1038/ng2104
-
R. Haygood, O. Fedrigo, B. Hanson, K.D. Yokoyama, and G.A. Wray Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution Nat. Genet. 39 2007 1140 1144 doi: 10.1038/ng2104
-
(2007)
Nat. Genet.
, vol.39
, pp. 1140-1144
-
-
Haygood, R.1
Fedrigo, O.2
Hanson, B.3
Yokoyama, K.D.4
Wray, G.A.5
-
52
-
-
70149100044
-
Evolutionary processes acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence
-
doi: 10.1371/journal.pgen.1000592
-
D.G. Torgerson, A.R. Boyko, R.D. Hernandez, A. Indap, X. Hu, T.J. White, J.J. Sninsky, M. Cargill, M.D. Adams, and C.D. Bustamante Evolutionary processes acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence PLoS Genet. 5 2009 e1000592 doi: 10.1371/journal.pgen.1000592
-
(2009)
PLoS Genet.
, vol.5
, pp. 1000592
-
-
Torgerson, D.G.1
Boyko, A.R.2
Hernandez, R.D.3
Indap, A.4
Hu, X.5
White, T.J.6
Sninsky, J.J.7
Cargill, M.8
Adams, M.D.9
Bustamante, C.D.10
-
53
-
-
50849144848
-
Selective constraints in experimentally defined primate regulatory regions
-
10.1371/journal.pgen.1000157
-
D.J. Gaffney, R. Blekhman, and J. Majewski Selective constraints in experimentally defined primate regulatory regions PLoS Genet. 4 2008 e1000157 10.1371/journal.pgen.1000157
-
(2008)
PLoS Genet.
, vol.4
, pp. 1000157
-
-
Gaffney, D.J.1
Blekhman, R.2
Majewski, J.3
-
54
-
-
84879684637
-
Genome-wide inference of natural selection on human transcription factor binding sites
-
Doi: 10.1038/ng.2658
-
L. Arbiza, I. Gronau, B.A. Aksoy, M.J. Hubisz, B. Gulko, A. Keinan, and A. Siepel Genome-wide inference of natural selection on human transcription factor binding sites Nat. Genet. 45 2013 723 729 Doi: 10.1038/ng.2658
-
(2013)
Nat. Genet.
, vol.45
, pp. 723-729
-
-
Arbiza, L.1
Gronau, I.2
Aksoy, B.A.3
Hubisz, M.J.4
Gulko, B.5
Keinan, A.6
Siepel, A.7
-
55
-
-
80055025720
-
Accelerated recruitment of new brain development genes into the human genome
-
doi: 10.1371/journal.pbio.1001179 pii:PBIOLOGY-D-11-01233
-
Y.E. Zhang, P. Landback, M.D. Vibranovski, and M. Long Accelerated recruitment of new brain development genes into the human genome PLoS Biol. 9 2011 e1001179 doi: 10.1371/journal.pbio.1001179 pii:PBIOLOGY-D-11-01233
-
(2011)
PLoS Biol.
, vol.9
, pp. 1001179
-
-
Zhang, Y.E.1
Landback, P.2
Vibranovski, M.D.3
Long, M.4
-
56
-
-
70350747578
-
A functional mouse retroposed gene Rps23r1 reduces Alzheimer's beta-amyloid levels and tau phosphorylation
-
doi: S0896-6273(09)00674-6 pii:10.1016/j.neuron.2009.08.036
-
Y.W. Zhang, S. Liu, X. Zhang, W.B. Li, Y. Chen, X. Huang, L. Sun, W. Luo, W.J. Netzer, and R. Threadgill A functional mouse retroposed gene Rps23r1 reduces Alzheimer's beta-amyloid levels and tau phosphorylation Neuron 64 2009 328 340 doi: S0896-6273(09)00674-6 pii:10.1016/j.neuron.2009.08.036
-
(2009)
Neuron
, vol.64
, pp. 328-340
-
-
Zhang, Y.W.1
Liu, S.2
Zhang, X.3
Li, W.B.4
Chen, Y.5
Huang, X.6
Sun, L.7
Luo, W.8
Netzer, W.J.9
Threadgill, R.10
-
57
-
-
84886293630
-
RCPedia: A database of retrocopied genes
-
Doi: http://dx.doi.org/10.1093/bioinformatics/btt104
-
F.C. Navarro, and P.A. Galante RCPedia: a database of retrocopied genes Bioinformatics 29 2013 1235 1237 Doi: http://dx.doi.org/10.1093/bioinformatics/ btt104
-
(2013)
Bioinformatics
, vol.29
, pp. 1235-1237
-
-
Navarro, F.C.1
Galante, P.A.2
-
58
-
-
43249118306
-
Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes
-
doi: 10.1371/journal.pbio.0060080 pii:08-PLBI-RA-0019
-
L. Potrzebowski, N. Vinckenbosch, A.C. Marques, F. Chalmel, B. Jegou, and H. Kaessmann Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes PLoS Biol. 6 2008 e80 doi: 10.1371/journal.pbio. 0060080 pii:08-PLBI-RA-0019
-
(2008)
PLoS Biol.
, vol.6
, pp. 80
-
-
Potrzebowski, L.1
Vinckenbosch, N.2
Marques, A.C.3
Chalmel, F.4
Jegou, B.5
Kaessmann, H.6
-
59
-
-
34547624125
-
A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids
-
Doi: gr.6252107 pii:10.1101/gr.6252107
-
D.V. Babushok, K. Ohshima, E.M. Ostertag, X. Chen, Y. Wang, P.K. Mandal, N. Okada, C.S. Abrams, and H.H. Kazazian Jr. A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids Genome Res. 17 2007 1129 1138 Doi: gr.6252107 pii:10.1101/gr.6252107
-
(2007)
Genome Res.
, vol.17
, pp. 1129-1138
-
-
Babushok, D.V.1
Ohshima, K.2
Ostertag, E.M.3
Chen, X.4
Wang, Y.5
Mandal, P.K.6
Okada, N.7
Abrams, C.S.8
Kazazian, Jr.H.H.9
-
60
-
-
30044433182
-
Molecular evolution and tempo of amplification of human LINE-1 retrotransposons since the origin of primates
-
Doi: gr.4001406, pii:10.1101/gr.4001406
-
H. Khan, A. Smit, and S. Boissinot Molecular evolution and tempo of amplification of human LINE-1 retrotransposons since the origin of primates Genome Res. 16 2006 78 87 Doi: gr.4001406, pii:10.1101/gr.4001406
-
(2006)
Genome Res.
, vol.16
, pp. 78-87
-
-
Khan, H.1
Smit, A.2
Boissinot, S.3
-
61
-
-
34247333809
-
Mobile DNA in Old World monkeys: A glimpse through the rhesus macaque genome
-
doi: 316/5822/238, pii:10.1126/science.1139462
-
K. Han, M.K. Konkel, J. Xing, H. Wang, J. Lee, T.J. Meyer, C.T. Huang, E. Sandifer, K. Hebert, and E.W. Barnes Mobile DNA in Old World monkeys: a glimpse through the rhesus macaque genome Science 316 2007 238 240 doi: 316/5822/238, pii:10.1126/science.1139462
-
(2007)
Science
, vol.316
, pp. 238-240
-
-
Han, K.1
Konkel, M.K.2
Xing, J.3
Wang, H.4
Lee, J.5
Meyer, T.J.6
Huang, C.T.7
Sandifer, E.8
Hebert, K.9
Barnes, E.W.10
-
62
-
-
0038645119
-
Origin of new genes: Evidence from experimental and computational analyses
-
M. Long, M. Deutsch, W. Wang, E. Betran, F.G. Brunet, and J. Zhang Origin of new genes: evidence from experimental and computational analyses Genetica 118 2003 171 182
-
(2003)
Genetica
, vol.118
, pp. 171-182
-
-
Long, M.1
Deutsch, M.2
Wang, W.3
Betran, E.4
Brunet, F.G.5
Zhang, J.6
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