-
1
-
-
57649114800
-
Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic
-
Agogué H, Brink M, Dinasquet J & Herndl GJ (2008) Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic. Nature 456: 788-791.
-
(2008)
Nature
, vol.456
, pp. 788-791
-
-
Agogué, H.1
Brink, M.2
Dinasquet, J.3
Herndl, G.J.4
-
2
-
-
80855131627
-
UV-inducible DNA exchange in hyperthermophilic archaea mediated by type IV pili
-
Ajon M, Fröls S, Van Wolferen M, Stoecker K, Teichmann D, Driessen AJM, Grogan DW, Albers SV & Schleper C (2011) UV-inducible DNA exchange in hyperthermophilic archaea mediated by type IV pili. Mol Microbiol 82: 807-817.
-
(2011)
Mol Microbiol
, vol.82
, pp. 807-817
-
-
Ajon, M.1
Fröls, S.2
Van Wolferen, M.3
Stoecker, K.4
Teichmann, D.5
Driessen, A.J.M.6
Grogan, D.W.7
Albers, S.V.8
Schleper, C.9
-
3
-
-
77950057025
-
Biogeography of soil archaea and bacteria along a steep precipitation gradient
-
Angel R, Soares MIM, Ungar ED & Gillor O (2009) Biogeography of soil archaea and bacteria along a steep precipitation gradient. ISME J 4: 553-563.
-
(2009)
ISME J
, vol.4
, pp. 553-563
-
-
Angel, R.1
Soares, M.I.M.2
Ungar, E.D.3
Gillor, O.4
-
4
-
-
40949111460
-
A hotspot for cold Crenarchaeota in the neuston of high mountain lakes
-
Auguet JC & Casamayor EO (2008) A hotspot for cold Crenarchaeota in the neuston of high mountain lakes. Environ Microbiol 10: 1080-1086.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1080-1086
-
-
Auguet, J.C.1
Casamayor, E.O.2
-
5
-
-
84874707666
-
Partitioning of Thaumarchaeota populations along environmental gradients in high mountain lakes
-
Auguet JC & Casamayor EO (2013) Partitioning of Thaumarchaeota populations along environmental gradients in high mountain lakes. FEMS Microbiol Ecol 84: 154-164
-
(2013)
FEMS Microbiol Ecol
, vol.84
, pp. 154-164
-
-
Auguet, J.C.1
Casamayor, E.O.2
-
6
-
-
51649106372
-
Fingerprinting the genetic diversity of the biotin carboxylase gene in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark
-
Auguet JC, Borrego CM, Baneras L & Casamayor EO (2008) Fingerprinting the genetic diversity of the biotin carboxylase gene in aquatic ecosystems as a potential marker for studies of carbon dioxide assimilation in the dark. Environ Microbiol 10: 2527-2536.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2527-2536
-
-
Auguet, J.C.1
Borrego, C.M.2
Baneras, L.3
Casamayor, E.O.4
-
7
-
-
76349125984
-
Global ecological patterns in uncultured archaea
-
Auguet JC, Barberan A & Casamayor EO (2010) Global ecological patterns in uncultured archaea. ISME J 4: 182-190.
-
(2010)
ISME J
, vol.4
, pp. 182-190
-
-
Auguet, J.C.1
Barberan, A.2
Casamayor, E.O.3
-
8
-
-
79953221862
-
Seasonal changes of freshwater ammonia-oxidizing archaeal assemblages and nitrogen species in oligotrophic alpine lakes
-
Auguet JC, Nomokonova N, Camarero L & Casamayor EO (2011) Seasonal changes of freshwater ammonia-oxidizing archaeal assemblages and nitrogen species in oligotrophic alpine lakes. Appl Environ Microbiol 77: 1937-1945.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 1937-1945
-
-
Auguet, J.C.1
Nomokonova, N.2
Camarero, L.3
Casamayor, E.O.4
-
9
-
-
84865332581
-
Vertical segregation and phylogenetic characterization of ammonia-oxidizing archaea in a deep oligotrophic lake
-
Auguet JC, Triado-Margarit X, Nomokonova N, Camarero L & Casamayor EO (2012) Vertical segregation and phylogenetic characterization of ammonia-oxidizing archaea in a deep oligotrophic lake. ISME J 6: 1786-1797.
-
(2012)
ISME J
, vol.6
, pp. 1786-1797
-
-
Auguet, J.C.1
Triado-Margarit, X.2
Nomokonova, N.3
Camarero, L.4
Casamayor, E.O.5
-
10
-
-
0029832927
-
Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences
-
Barns SM, Delwiche CF, Palmer JD & Pace NR (1996) Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences. P Natl Acad Sci USA 93: 9189-9193.
-
(1996)
P Natl Acad Sci USA
, vol.93
, pp. 9189-9193
-
-
Barns, S.M.1
Delwiche, C.F.2
Palmer, J.D.3
Pace, N.R.4
-
11
-
-
79955057814
-
Examining the global distribution of dominant archaeal populations in soil
-
Bates ST, Berg-Lyons D, Caporaso JG, Walters WA, Knight R & Fierer N (2010) Examining the global distribution of dominant archaeal populations in soil. ISME J 5: 908-917.
-
(2010)
ISME J
, vol.5
, pp. 908-917
-
-
Bates, S.T.1
Berg-Lyons, D.2
Caporaso, J.G.3
Walters, W.A.4
Knight, R.5
Fierer, N.6
-
12
-
-
42049122119
-
Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California
-
Beman JM, Popp BN & Francis CA (2008) Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California. ISME J 2: 429-441.
-
(2008)
ISME J
, vol.2
, pp. 429-441
-
-
Beman, J.M.1
Popp, B.N.2
Francis, C.A.3
-
13
-
-
79958261866
-
Bottom-up versus Top-down control of hypo- and epilimnion free living bacterial community structures in two neighboring freshwater lakes
-
Berdjeb L, Ghiglione JF & Jacquet S (2011a) Bottom-up versus Top-down control of hypo- and epilimnion free living bacterial community structures in two neighboring freshwater lakes. Appl Environ Microbiol 77: 3591-3599.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 3591-3599
-
-
Berdjeb, L.1
Ghiglione, J.F.2
Jacquet, S.3
-
14
-
-
79957530370
-
A 2-year assessment of the main environmental factors driving the free living bacterial community structure in Lake Bourget (France)
-
Berdjeb L, Ghiglione JF, Domaizon I & Jacquet S (2011b) A 2-year assessment of the main environmental factors driving the free living bacterial community structure in Lake Bourget (France). Microb Ecol 61: 941-954.
-
(2011)
Microb Ecol
, vol.61
, pp. 941-954
-
-
Berdjeb, L.1
Ghiglione, J.F.2
Domaizon, I.3
Jacquet, S.4
-
15
-
-
0031013145
-
Molecular phylogeny of archaea from soil
-
Bintrim SB, Donohue TJ, Handelsman J, Roberts GP & Goodman RM (1997) Molecular phylogeny of archaea from soil. P Natl Acad Sci USA 94: 277-282.
-
(1997)
P Natl Acad Sci USA
, vol.94
, pp. 277-282
-
-
Bintrim, S.B.1
Donohue, T.J.2
Handelsman, J.3
Roberts, G.P.4
Goodman, R.M.5
-
16
-
-
67650488817
-
Viral and flagellate control of prokaryotic production and community structure in offshore Mediterranean waters
-
Bonilla-Findji O, Herndl GJ, Gattuso JP & Weinbauer MG (2009) Viral and flagellate control of prokaryotic production and community structure in offshore Mediterranean waters. Appl Environ Microbiol 75: 4801-4812.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 4801-4812
-
-
Bonilla-Findji, O.1
Herndl, G.J.2
Gattuso, J.P.3
Weinbauer, M.G.4
-
17
-
-
0036202170
-
Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants
-
Boon N, De Windt W, Verstraete W & Top EEM (2002) Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants. FEMS Microbiol Ecol 39: 101-112.
-
(2002)
FEMS Microbiol Ecol
, vol.39
, pp. 101-112
-
-
Boon, N.1
De Windt, W.2
Verstraete, W.3
Top, E.E.M.4
-
18
-
-
39149118031
-
Mesophilic Crenarchaeota, proposal for a third archaeal phylum, the Thaumarchaeota
-
Brochier-Armanet C, Boussau B, Gribaldo S & Forterre P (2008) Mesophilic Crenarchaeota, proposal for a third archaeal phylum, the Thaumarchaeota. Nat Rev Microbiol 6: 245-252.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 245-252
-
-
Brochier-Armanet, C.1
Boussau, B.2
Gribaldo, S.3
Forterre, P.4
-
19
-
-
0031733317
-
Phylogenetic analysis of nonthermophilic members of the kingdom Crenarchaeota and their diversity and abundance in soils
-
Buckley DH, Graber JR & Schmidt TM (1998) Phylogenetic analysis of nonthermophilic members of the kingdom Crenarchaeota and their diversity and abundance in soils. Appl Environ Microbiol 64: 4333-4339.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 4333-4339
-
-
Buckley, D.H.1
Graber, J.R.2
Schmidt, T.M.3
-
20
-
-
70449408503
-
Bacteria, archaea and Crenarchaeota in the epilimnion and hypolimnion of a deep holo-oligomictic lake
-
Callieri C, Corno G, Caravati E, Rasconi S, Contesini M & Bertoni R (2009) Bacteria, archaea and Crenarchaeota in the epilimnion and hypolimnion of a deep holo-oligomictic lake. Appl Environ Microbiol 75: 7298-7300.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7298-7300
-
-
Callieri, C.1
Corno, G.2
Caravati, E.3
Rasconi, S.4
Contesini, M.5
Bertoni, R.6
-
21
-
-
70449351679
-
Archaea in inland waters
-
Likens G, ed.) Elsevier Academics Press, Oxford.
-
Casamayor EO & Borrego CM (2009) Archaea in inland waters. Encyclopedia of Inland Waters (Likens G, ed.), pp. 167-181. Elsevier Academics Press, Oxford.
-
(2009)
Encyclopedia of Inland Waters
, pp. 167-181
-
-
Casamayor, E.O.1
Borrego, C.M.2
-
22
-
-
17544390961
-
Identification of and spatio-temporal differences between microbial assemblages from two neighboring Sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis
-
Casamayor EO, Schafer H, Baneras L, Pedros-Alio C & Muyzer G (2000) Identification of and spatio-temporal differences between microbial assemblages from two neighboring Sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis. Appl Environ Microbiol 2: 499-508.
-
(2000)
Appl Environ Microbiol
, vol.2
, pp. 499-508
-
-
Casamayor, E.O.1
Schafer, H.2
Baneras, L.3
Pedros-Alio, C.4
Muyzer, G.5
-
23
-
-
0035965093
-
Composition and temporal dynamics of planktonic archaeal assemblages from anaerobic sulfurous environments studied by 16S rDNA denaturing gradient gel electrophoresis and sequencing
-
Casamayor EO, Muyzer G & Pedrós-Alió C (2001) Composition and temporal dynamics of planktonic archaeal assemblages from anaerobic sulfurous environments studied by 16S rDNA denaturing gradient gel electrophoresis and sequencing. Aquat Microb Ecol 25: 237-246.
-
(2001)
Aquat Microb Ecol
, vol.25
, pp. 237-246
-
-
Casamayor, E.O.1
Muyzer, G.2
Pedrós-Alió, C.3
-
24
-
-
33744483524
-
Archaeal habitats, from the extreme to the ordinary
-
Chaban B, Ng SYM & Jarrell KF (2006) Archaeal habitats, from the extreme to the ordinary. Can J Microbiol 52: 73-116.
-
(2006)
Can J Microbiol
, vol.52
, pp. 73-116
-
-
Chaban, B.1
Ng, S.Y.M.2
Jarrell, K.F.3
-
25
-
-
0141428760
-
Abundance and distribution of planktonic Archaea and Bacteria in the waters west of the Antarctic Peninsula
-
Church MJ, DeLong EF, Ducklow HW, Karner MB, Preston CM & Karl DM (2003) Abundance and distribution of planktonic Archaea and Bacteria in the waters west of the Antarctic Peninsula. Limnol Oceanogr 48: 1893-1902.
-
(2003)
Limnol Oceanogr
, vol.48
, pp. 1893-1902
-
-
Church, M.J.1
DeLong, E.F.2
Ducklow, H.W.3
Karner, M.B.4
Preston, C.M.5
Karl, D.M.6
-
27
-
-
13444304367
-
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
-
Cole JR, Chai B, Farris RJ, Wang Q, Kulam SA, McGarrell DM, Garrity GM & Tiedje JM (2005) The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acid Res 33: D294-D296.
-
(2005)
Nucleic Acid Res
, vol.33
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
Wang, Q.4
Kulam, S.A.5
McGarrell, D.M.6
Garrity, G.M.7
Tiedje, J.M.8
-
28
-
-
33748450563
-
Microbial community structure and dynamics in the largest natural French lake (Lake Bourget)
-
Comte J, Jacquet S, Viboud S, Fontvieille D, Millery A, Paolini G & Domaizon I (2006) Microbial community structure and dynamics in the largest natural French lake (Lake Bourget). Microb Ecol 52: 72-89.
-
(2006)
Microb Ecol
, vol.52
, pp. 72-89
-
-
Comte, J.1
Jacquet, S.2
Viboud, S.3
Fontvieille, D.4
Millery, A.5
Paolini, G.6
Domaizon, I.7
-
29
-
-
33947110858
-
Putative ammonia-oxidizing Crenarchaeota in suboxic waters of the Black Sea, a basin-wide ecological study using 16S ribosomal and functional genes and membrane lipids
-
Coolen MJL, Abbas B, Van Blejiswijk J, Hopmans EC, Kuypers MMM, Wakeham SG & Sinninghe-Damste JS (2007) Putative ammonia-oxidizing Crenarchaeota in suboxic waters of the Black Sea, a basin-wide ecological study using 16S ribosomal and functional genes and membrane lipids. Environ Microbiol 9: 1001-1016.
-
(2007)
Environ Microbiol
, vol.9
, pp. 1001-1016
-
-
Coolen, M.J.L.1
Abbas, B.2
Van Blejiswijk, J.3
Hopmans, E.C.4
Kuypers, M.M.M.5
Wakeham, S.G.6
Sinninghe-Damste, J.S.7
-
30
-
-
0034051905
-
Archaeaplankton in the Columbia River, its estuary and the adjacent coastal ocean, USA
-
Crump BC & Baross JA (2000) Archaeaplankton in the Columbia River, its estuary and the adjacent coastal ocean, USA. FEMS Microbiol Ecol 31: 231-239.
-
(2000)
FEMS Microbiol Ecol
, vol.31
, pp. 231-239
-
-
Crump, B.C.1
Baross, J.A.2
-
31
-
-
18444372956
-
Nested PCR-denaturing gradient gel electrophoresis approach to determine the diversity of sulfate-reducing bacteria in complex microbial communities
-
Dar SA, Kuenen JG & Muyzer G (2005) Nested PCR-denaturing gradient gel electrophoresis approach to determine the diversity of sulfate-reducing bacteria in complex microbial communities. Appl Environ Microbiol 71: 2325-2330.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 2325-2330
-
-
Dar, S.A.1
Kuenen, J.G.2
Muyzer, G.3
-
32
-
-
0005744291
-
Complex lipids of Caldariella acidophila, a thermoacidophile archaebacterium
-
De Rosa MA, Gambacorta BN & Bu'Lock JD (1980) Complex lipids of Caldariella acidophila, a thermoacidophile archaebacterium. Phytochemistry 19: 821-825.
-
(1980)
Phytochemistry
, vol.19
, pp. 821-825
-
-
De Rosa, M.A.1
Gambacorta, B.N.2
Bu'Lock, J.D.3
-
33
-
-
0026755238
-
Archaea in coastal marine environments
-
DeLong EF (1992) Archaea in coastal marine environments. P Natl Acad Sci USA 89: 5685-5689.
-
(1992)
P Natl Acad Sci USA
, vol.89
, pp. 5685-5689
-
-
DeLong, E.F.1
-
34
-
-
33748493816
-
Spatial variability in the abundance and composition of the free-living bacterioplankton community in the pelagic zone of Lake Bourget (France)
-
Dorigo U, Fontvieille D & Humbert JF (2006) Spatial variability in the abundance and composition of the free-living bacterioplankton community in the pelagic zone of Lake Bourget (France). FEMS Microbiol Ecol 58: 109-119.
-
(2006)
FEMS Microbiol Ecol
, vol.58
, pp. 109-119
-
-
Dorigo, U.1
Fontvieille, D.2
Humbert, J.F.3
-
35
-
-
68149112220
-
Environmental factors shaping the ecological niches of ammonia-oxidizing archaea
-
Erguder TH, Boon N, Wittebolle L, Marzorati M & Verstraete W (2009) Environmental factors shaping the ecological niches of ammonia-oxidizing archaea. FEMS Microbiol Rev 33: 855-869.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 855-869
-
-
Erguder, T.H.1
Boon, N.2
Wittebolle, L.3
Marzorati, M.4
Verstraete, W.5
-
36
-
-
0017347967
-
Comparative cataloging of 16S ribosomal RNA, molecular approach to prokaryotic systematics
-
Fox GE, Pechman KR & Woese CR (1977) Comparative cataloging of 16S ribosomal RNA, molecular approach to prokaryotic systematics. Int J Syst Bacteriol 27: 44-57.
-
(1977)
Int J Syst Bacteriol
, vol.27
, pp. 44-57
-
-
Fox, G.E.1
Pechman, K.R.2
Woese, C.R.3
-
37
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
Francis CA, Roberts KJ, Beman JM, Santoro AE & Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. P Natl Acad Sci USA 102: 14683-14688.
-
(2005)
P Natl Acad Sci USA
, vol.102
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
38
-
-
0026525546
-
Novel major archaebacterial group from marine plankton
-
Fuhrman JA, McCallum K & Davids AA (1992) Novel major archaebacterial group from marine plankton. Nature 356: 148-149.
-
(1992)
Nature
, vol.356
, pp. 148-149
-
-
Fuhrman, J.A.1
McCallum, K.2
Davids, A.A.3
-
39
-
-
33750053594
-
Remarkably diverse and contrasting archaeal communities in a large arctic river and the coastal Arctic Ocean
-
Galand PE, Lovejoy C & Vincent WF (2006) Remarkably diverse and contrasting archaeal communities in a large arctic river and the coastal Arctic Ocean. Aquat Microb Ecol 44: 115-126.
-
(2006)
Aquat Microb Ecol
, vol.44
, pp. 115-126
-
-
Galand, P.E.1
Lovejoy, C.2
Vincent, W.F.3
-
40
-
-
77951520879
-
Nested PCR and new primers for analysis of sulfate-reducing bacteria in low-cell-biomass environments
-
Giloteaux L, Goni-Urriza M & Duran R (2010) Nested PCR and new primers for analysis of sulfate-reducing bacteria in low-cell-biomass environments. Appl Environ Microbiol 76: 2856-2865.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 2856-2865
-
-
Giloteaux, L.1
Goni-Urriza, M.2
Duran, R.3
-
41
-
-
84868628461
-
Diversity, physiology and niche differentiation of ammonia-oxidizing archaea
-
Hatzenpichler R (2012) Diversity, physiology and niche differentiation of ammonia-oxidizing archaea. Appl Environ Microbiol 78: 7501-7510.
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 7501-7510
-
-
Hatzenpichler, R.1
-
42
-
-
67649220035
-
Diversity of archaea and detection of Crenarchaeotal amoA genes in the rivers Rhine and Têt
-
Hertfort L, Kim JH, Coolen MJL, Abbas B, Schouten S, Herndl GJ & Sinninghe-Damste JS (2009) Diversity of archaea and detection of Crenarchaeotal amoA genes in the rivers Rhine and Têt. Aquat Microb Ecol 55: 189-201.
-
(2009)
Aquat Microb Ecol
, vol.55
, pp. 189-201
-
-
Hertfort, L.1
Kim, J.H.2
Coolen, M.J.L.3
Abbas, B.4
Schouten, S.5
Herndl, G.J.6
Sinninghe-Damste, J.S.7
-
43
-
-
78649484001
-
Community structures of ammonia-oxidizing archaea and bacteria in high-altitude lakes on the Tibetan Plateau
-
Hu A, Yao T, Jiao N, Liu Y, Yang Z & Liu X (2010) Community structures of ammonia-oxidizing archaea and bacteria in high-altitude lakes on the Tibetan Plateau. Freshw Biol 55: 2375-2390.
-
(2010)
Freshw Biol
, vol.55
, pp. 2375-2390
-
-
Hu, A.1
Yao, T.2
Jiao, N.3
Liu, Y.4
Yang, Z.5
Liu, X.6
-
44
-
-
5044240973
-
Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
-
Huber T, Faulkner G & Hugenholtz P (2004) Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20: 2317-2319.
-
(2004)
Bioinformatics
, vol.20
, pp. 2317-2319
-
-
Huber, T.1
Faulkner, G.2
Hugenholtz, P.3
-
45
-
-
33646262107
-
Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon
-
Ingalls AE, Shah SR, Hansman RL, Aluwihare LI, Santos GM, Druffel ERM & Pearson A (2006) Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon. P Natl Acad Sci USA 103: 6442-6447.
-
(2006)
P Natl Acad Sci USA
, vol.103
, pp. 6442-6447
-
-
Ingalls, A.E.1
Shah, S.R.2
Hansman, R.L.3
Aluwihare, L.I.4
Santos, G.M.5
Druffel, E.R.M.6
Pearson, A.7
-
46
-
-
22044441845
-
Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: microcosms experiments
-
Jardillier L, Boucher D, Personnic S, Jacquet S, Thenot A, Sargos D, Amblard C & Debroas D (2005) Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: microcosms experiments. FEMS Microbiol Ecol 55: 429-443.
-
(2005)
FEMS Microbiol Ecol
, vol.55
, pp. 429-443
-
-
Jardillier, L.1
Boucher, D.2
Personnic, S.3
Jacquet, S.4
Thenot, A.5
Sargos, D.6
Amblard, C.7
Debroas, D.8
-
47
-
-
70449359730
-
Response of archaeal community structure to environmental changes in lakes on the Tibetan Plateau, Northwestern China
-
Jiang HC, Dong HL, Deng SC, Yu BS, Huang QY & Wu QL (2009) Response of archaeal community structure to environmental changes in lakes on the Tibetan Plateau, Northwestern China. Geomicrobiol J 26: 289-297.
-
(2009)
Geomicrobiol J
, vol.26
, pp. 289-297
-
-
Jiang, H.C.1
Dong, H.L.2
Deng, S.C.3
Yu, B.S.4
Huang, Q.Y.5
Wu, Q.L.6
-
48
-
-
0033771975
-
Identification of novel archaea in bacterioplankton of a boreal forest lake by phylogenetic analysis and fluorescent in situ hybridization
-
Jurgens G, Glöckner FO, Amman R, Saano A, Montonen L, Likolammi M & Munster U (2000) Identification of novel archaea in bacterioplankton of a boreal forest lake by phylogenetic analysis and fluorescent in situ hybridization. FEMS Microbiol Ecol 34: 45-56.
-
(2000)
FEMS Microbiol Ecol
, vol.34
, pp. 45-56
-
-
Jurgens, G.1
Glöckner, F.O.2
Amman, R.3
Saano, A.4
Montonen, L.5
Likolammi, M.6
Munster, U.7
-
49
-
-
0035945618
-
Archaeal dominance in the mesopelagic zone of the Pacific ocean
-
Karner MB, Delong EF & Karl DM (2001) Archaeal dominance in the mesopelagic zone of the Pacific ocean. Nature 409: 507-510.
-
(2001)
Nature
, vol.409
, pp. 507-510
-
-
Karner, M.B.1
Delong, E.F.2
Karl, D.M.3
-
50
-
-
0142186057
-
Archaeal nucleic acids in picoplankton from great lakes from three continents
-
Keough BP, Schmidt TM & Hicks RE (2003) Archaeal nucleic acids in picoplankton from great lakes from three continents. Microb Ecol 46: 238-248.
-
(2003)
Microb Ecol
, vol.46
, pp. 238-248
-
-
Keough, B.P.1
Schmidt, T.M.2
Hicks, R.E.3
-
51
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Könneke M, Bernhard AE, de la Torre JR, Walker CB, Waterbury JB & Stahl DA (2005) Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437: 543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Könneke, M.1
Bernhard, A.E.2
de la Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
52
-
-
53949086905
-
High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study
-
Lliros M, Casamayor EO & Borrego CM (2008) High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study. FEMS Microbiol Ecol 66: 331-342.
-
(2008)
FEMS Microbiol Ecol
, vol.66
, pp. 331-342
-
-
Lliros, M.1
Casamayor, E.O.2
Borrego, C.M.3
-
53
-
-
77958592618
-
Vertical distribution of ammonia-oxidizing Crenarchaeota and methanogens in the epipelagic waters of Lake Kivu (Rwanda-Democratic Republic of the Congo)
-
Lliros M, Gich F, Plasencia A, Auguet JC, Darchambeau F, Casamayor EO, Descy JP & Borrego C (2010) Vertical distribution of ammonia-oxidizing Crenarchaeota and methanogens in the epipelagic waters of Lake Kivu (Rwanda-Democratic Republic of the Congo). Appl Environ Microbiol 76: 6853-6863.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 6853-6863
-
-
Lliros, M.1
Gich, F.2
Plasencia, A.3
Auguet, J.C.4
Darchambeau, F.5
Casamayor, E.O.6
Descy, J.P.7
Borrego, C.8
-
54
-
-
0031033118
-
Crenarchaeota in Lake Michigan sediment
-
MacGregor BJ, Moser DP, Alm EW, Nealson KH & Stahl DA (1997) Crenarchaeota in Lake Michigan sediment. Appl Environ Microbiol 63: 1178-1181.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 1178-1181
-
-
MacGregor, B.J.1
Moser, D.P.2
Alm, E.W.3
Nealson, K.H.4
Stahl, D.A.5
-
57
-
-
0034114417
-
A few cosmopolitan phylotypes dominate planktonic archaea assemblages in widely different oceanic provinces
-
Massana R, Delong EF & Pedros-Alio C (2000) A few cosmopolitan phylotypes dominate planktonic archaea assemblages in widely different oceanic provinces. Appl Environ Microbiol 66: 1777-1787.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 1777-1787
-
-
Massana, R.1
Delong, E.F.2
Pedros-Alio, C.3
-
58
-
-
0031814110
-
Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Island, Antarctica
-
Murray AE, Preston CM, Massana R, Taylor LT, Blakis A, Wu K & Delong EF (1998) Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Island, Antarctica. Appl Environ Microbiol 64: 2585-2595.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 2585-2595
-
-
Murray, A.E.1
Preston, C.M.2
Massana, R.3
Taylor, L.T.4
Blakis, A.5
Wu, K.6
Delong, E.F.7
-
59
-
-
0030805150
-
Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
-
Ovreas L, Forney L, Daae FL & Torsvik V (1997) Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl Environ Microbiol 63: 3367-3373.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 3367-3373
-
-
Ovreas, L.1
Forney, L.2
Daae, F.L.3
Torsvik, V.4
-
60
-
-
70149120519
-
Microbial biogeography of six salt lakes in inner Mongolia China and a Sal Lake in Argentina
-
Pagaling E, Wang H, Venables M, Wallace A, Grant WD, Cowan DA, Jones BE, Ma Y, Ventosa A & Heaphy S (2009) Microbial biogeography of six salt lakes in inner Mongolia China and a Sal Lake in Argentina. Appl Environ Microbiol 75: 5750-5760.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 5750-5760
-
-
Pagaling, E.1
Wang, H.2
Venables, M.3
Wallace, A.4
Grant, W.D.5
Cowan, D.A.6
Jones, B.E.7
Ma, Y.8
Ventosa, A.9
Heaphy, S.10
-
61
-
-
0345596420
-
Seasonal community and population dynamics of pelagic bacteria and archaea in a high mountain lake
-
Pernthaler J, Glöckner FO, Unterholzner S, Alfreider A, Psenner R & Amann R (1998) Seasonal community and population dynamics of pelagic bacteria and archaea in a high mountain lake. Appl Environ Microbiol 64: 4299-4306.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 4299-4306
-
-
Pernthaler, J.1
Glöckner, F.O.2
Unterholzner, S.3
Alfreider, A.4
Psenner, R.5
Amann, R.6
-
62
-
-
63949084007
-
Seasonal and spatial variability of virio, bacterio- and picophytoplanktonic abundances in three peri-alpine lakes
-
Personnic S, Domaizon I, Dorigo U, Berdjeb L & Jacquet S (2009) Seasonal and spatial variability of virio, bacterio- and picophytoplanktonic abundances in three peri-alpine lakes. Hydrobiologia 627: 99-111.
-
(2009)
Hydrobiologia
, vol.627
, pp. 99-111
-
-
Personnic, S.1
Domaizon, I.2
Dorigo, U.3
Berdjeb, L.4
Jacquet, S.5
-
63
-
-
61449179310
-
Vertical structure of archaeal communities and the distribution of ammonia monooxygenases A gene variants in two meromictic high arctic lakes
-
Pouliot J, Galand PE, Lovejoy C & Vincent WF (2009) Vertical structure of archaeal communities and the distribution of ammonia monooxygenases A gene variants in two meromictic high arctic lakes. Environ Microbiol 11: 687-699.
-
(2009)
Environ Microbiol
, vol.11
, pp. 687-699
-
-
Pouliot, J.1
Galand, P.E.2
Lovejoy, C.3
Vincent, W.F.4
-
64
-
-
84867901720
-
Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation
-
Prosser JI & Nicol GW (2012) Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation. Trends Microbiol 20: 523-531.
-
(2012)
Trends Microbiol
, vol.20
, pp. 523-531
-
-
Prosser, J.I.1
Nicol, G.W.2
-
65
-
-
0031033384
-
Recovery of Crenarchaeotal ribosomal DNA sequences from freshwater-lake sediments
-
Schleper C, Holben W & Klenl HP (1997) Recovery of Crenarchaeotal ribosomal DNA sequences from freshwater-lake sediments. Appl Environ Microbiol 63: 321-323.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 321-323
-
-
Schleper, C.1
Holben, W.2
Klenl, H.P.3
-
67
-
-
77955273494
-
Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota
-
Spang A, Hatzenpichler R, Brochier-Armanet C, Rattei T, Tischler P, Spieck E, Streit W, Stahl DA, Wagner M & Schleper C (2010) Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. Trends Microbiol 18: 331-340.
-
(2010)
Trends Microbiol
, vol.18
, pp. 331-340
-
-
Spang, A.1
Hatzenpichler, R.2
Brochier-Armanet, C.3
Rattei, T.4
Tischler, P.5
Spieck, E.6
Streit, W.7
Stahl, D.A.8
Wagner, M.9
Schleper, C.10
-
68
-
-
84872250001
-
Physiology and diversity of ammonia-oxidizing Archaea
-
Stahl DA & de la Torre JR (2012) Physiology and diversity of ammonia-oxidizing Archaea. Annu Rev Microbiol 66: 83-101.
-
(2012)
Annu Rev Microbiol
, vol.66
, pp. 83-101
-
-
Stahl, D.A.1
de la Torre, J.R.2
-
69
-
-
79958017622
-
Contribution of Crenarchaeota and Bacteria to autotrophy in the North Atlantic interior
-
Varela MM, van Aken HM, Sintes E, Reinthaler T & Herndl GJ (2011) Contribution of Crenarchaeota and Bacteria to autotrophy in the North Atlantic interior. Environ Microbiol 13: 1524-1533.
-
(2011)
Environ Microbiol
, vol.13
, pp. 1524-1533
-
-
Varela, M.M.1
van Aken, H.M.2
Sintes, E.3
Reinthaler, T.4
Herndl, G.J.5
-
70
-
-
68949209844
-
A nested PCR approach for improved recovery of archaeal 16S rRNA gene fragments from freshwater samples
-
Vissers EW, Bodelier PLE, Muyzer G & Laanbroek HJ (2009) A nested PCR approach for improved recovery of archaeal 16S rRNA gene fragments from freshwater samples. FEMS Microbiol Lett 298: 193-198.
-
(2009)
FEMS Microbiol Lett
, vol.298
, pp. 193-198
-
-
Vissers, E.W.1
Bodelier, P.L.E.2
Muyzer, G.3
Laanbroek, H.J.4
-
71
-
-
84871995940
-
Seasonal and vertical distribution of putative ammonia-oxidizing Thaumarchaeotal communities in an oligotrophic lake
-
Vissers EW, Blaga CI, Bodelier PLE, Muyzer G, Schleper C, Sinninghe Damsté JS, Tourna M & Laanbroek HJ (2013) Seasonal and vertical distribution of putative ammonia-oxidizing Thaumarchaeotal communities in an oligotrophic lake. FEMS Microbiol Ecol 83: 515-526.
-
(2013)
FEMS Microbiol Ecol
, vol.83
, pp. 515-526
-
-
Vissers, E.W.1
Blaga, C.I.2
Bodelier, P.L.E.3
Muyzer, G.4
Schleper, C.5
Sinninghe Damsté, J.S.6
Tourna, M.7
Laanbroek, H.J.8
-
72
-
-
2342579410
-
Impact of virioplankton on archaeal and bacterial community richness as assessed in seawater batch cultures
-
Winter C, Smit A, Herndl GJ & Weinbauer MG (2004) Impact of virioplankton on archaeal and bacterial community richness as assessed in seawater batch cultures. Appl Environ Microbiol 70: 804-813.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 804-813
-
-
Winter, C.1
Smit, A.2
Herndl, G.J.3
Weinbauer, M.G.4
-
73
-
-
0025300402
-
Towards a natural system of organisms, proposal for the domains Archaea, Bacteria and Eucarya
-
Woese CR, Kandler O & Wheelis ML (1990) Towards a natural system of organisms, proposal for the domains Archaea, Bacteria and Eucarya. P Natl Acad Sci USA 87: 4576-4579.
-
(1990)
P Natl Acad Sci USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
75
-
-
84864775740
-
Abundance and community composition of ammonia-oxidizing archaea and bacteria in two different zone of Lake Taihu
-
Zeng J, Zhao DY, Huang RR & Wu QL (2012) Abundance and community composition of ammonia-oxidizing archaea and bacteria in two different zone of Lake Taihu. Can J Microbiol 58: 1018-1026.
-
(2012)
Can J Microbiol
, vol.58
, pp. 1018-1026
-
-
Zeng, J.1
Zhao, D.Y.2
Huang, R.R.3
Wu, Q.L.4
|