-
1
-
-
57649114800
-
Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic
-
Agogué H, Brink M, Dinasquet J, Herndl GJ. (2008). Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic. Nature 456: 788-792.
-
(2008)
Nature
, vol.456
, pp. 788-792
-
-
Agogué, H.1
Brink, M.2
Dinasquet, J.3
Herndl, G.J.4
-
2
-
-
0025183708
-
Basic Local Alignment Search Tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. (1990). Basic Local Alignment Search Tool. J Mol Biol 215: 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
76349125984
-
Global ecological patterns in uncultured Archaea
-
Auguet JC, Barberán A, Casamayor EO. (2010). Global ecological patterns in uncultured Archaea. ISME J 4: 182-190.
-
(2010)
ISME J
, vol.4
, pp. 182-190
-
-
Auguet, J.C.1
Barberán, A.2
Casamayor, E.O.3
-
4
-
-
40949111460
-
A hotspot for cold crenarchaeota in the neuston of high mountain lakes
-
DOI 10.1111/j.1462-2920.2007.01498.x
-
Auguet JC, Casamayor EO. (2008). A hotspot for cold crenarchaeota in the neuston of high mountain lakes. Environ Microbiol 10: 1080-1086. (Pubitemid 351406083)
-
(2008)
Environmental Microbiology
, vol.10
, Issue.4
, pp. 1080-1086
-
-
Auguet, J.-C.1
Casamayor, E.O.2
-
5
-
-
79953221862
-
Seasonal changes of freshwater ammonia-oxidizing archaeal assemblages and nitrogen species in oligotrophic alpine lakes
-
Auguet JC, Nomokonova N, Camarero L, Casamayor EO. (2011). Seasonal changes of freshwater ammonia-oxidizing archaeal assemblages and nitrogen species in oligotrophic alpine lakes. Appl Environ Microbiol 77: 1937-1945.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 1937-1945
-
-
Auguet, J.C.1
Nomokonova, N.2
Camarero, L.3
Casamayor, E.O.4
-
6
-
-
77954288795
-
Global phylogenetic community structure and beta-diversity patterns of surface bacterioplankton metacommunities
-
Barberán A, Casamayor EO. (2010). Global phylogenetic community structure and beta-diversity patterns of surface bacterioplankton metacommunities. Aquat Microb Ecol 59: 1-10.
-
(2010)
Aquat Microb Ecol
, vol.59
, pp. 1-10
-
-
Barberán, A.1
Casamayor, E.O.2
-
7
-
-
79954748699
-
Phylogenetic ecology of widespread uncultured clades of the Kingdom Euryarchaeota
-
Barberán A, Fernandez-Guerra A, Auguet J-C, Galand PE, Casamayor EO. (2011). Phylogenetic ecology of widespread uncultured clades of the Kingdom Euryarchaeota. Mol Ecol 20: 1988-1996.
-
(2011)
Mol Ecol
, vol.20
, pp. 1988-1996
-
-
Barberán, A.1
Fernandez-Guerra, A.2
Auguet, J.-C.3
Galand, P.E.4
Casamayor, E.O.5
-
8
-
-
42049122119
-
Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California
-
DOI 10.1038/ismej.2007.118, PII ISMEJ2007118
-
Beman JM, Popp BN, Francis CA. (2008). Molecular and biogeochemical evidence for ammonia oxidation by marine Crenarchaeota in the Gulf of California. ISME J 2: 429-441. (Pubitemid 351518401)
-
(2008)
ISME Journal
, vol.2
, Issue.4
, pp. 429-441
-
-
Beman, J.M.1
Popp, B.N.2
Francis, C.A.3
-
9
-
-
79952050667
-
Genome of a low-salinity ammonia-oxidizing archaeon determined by single-cell and metagenomic analysis
-
Blainey PC, Mosier AC, Potanina A, Francis CA, Quake SR. (2011). Genome of a low-salinity ammonia-oxidizing archaeon determined by single-cell and metagenomic analysis. PLoS One 6: e16626.
-
(2011)
PLoS One
, vol.6
-
-
Blainey, P.C.1
Mosier, A.C.2
Potanina, A.3
Francis, C.A.4
Quake, S.R.5
-
10
-
-
0036794991
-
Growth at low ammonium concentrations and starvation response as potential factors involved in niche differentiation among ammonia-oxidizing bacteria
-
DOI 10.1128/AEM.68.10.4751-4757.2002
-
Bollmann A, Bar-Gilissen MJ, Laanbroek HJ. (2002). Growth at low ammonium concentrations and starvation response as potential factors involved in niche differentiation among ammonia-oxidizing bacteria. Appl Environ Microbiol 68: 4751-4757. (Pubitemid 35154777)
-
(2002)
Applied and Environmental Microbiology
, vol.68
, Issue.10
, pp. 4751-4757
-
-
Bollmann, A.1
Bar-Gilissen, M.-J.2
Laanbroek, H.J.3
-
11
-
-
0028193111
-
Nitrogen in the Pyrenean lakes (Spain)
-
Catalan J, Camarero L, Gacia E, Ballesteros E, Felip M. (1994). Nitrogen in the Pyrenean lakes (Spain). Hydrobiologia 274: 17-27. (Pubitemid 24405739)
-
(1994)
Hydrobiologia
, vol.274
, Issue.1-3
, pp. 17-27
-
-
Catalan, J.1
Camarero, L.2
Gacia, E.3
Ballesteros, E.4
Felip, M.5
-
12
-
-
33747046069
-
High mountain lakes: Extreme habitats and witnesses of environmental changes
-
Catalan J, Camarero L, Felip M, Pla S, Ventura M, Buchaca T et al. (2006). High mountain lakes: extreme habitats and witnesses of environmental changes. Limnetica 25: 551-584. (Pubitemid 44211119)
-
(2006)
Limnetica
, vol.25
, Issue.1-2
, pp. 551-584
-
-
Catalan, J.1
Camarero, L.2
Felip, M.3
Pla, S.4
Ventura, M.5
Buchaca, T.6
Bartumeus, F.7
De Mendoza, G.8
Miro, A.9
Casamayor, E.O.10
Medina-Sanchez, J.M.11
Bacardit, M.12
Altuna, M.13
Bartrons, M.14
De Quijano, D.D.15
-
13
-
-
77953940648
-
Abundances of crenarchaeal amoA genes and transcripts in the Pacific Ocean
-
Church MJ, Wai B, Karl DM, DeLong EF. (2010). Abundances of crenarchaeal amoA genes and transcripts in the Pacific Ocean. Environ Microbiol 12: 679-688.
-
(2010)
Environ Microbiol
, vol.12
, pp. 679-688
-
-
Church, M.J.1
Wai, B.2
Karl, D.M.3
Delong, E.F.4
-
14
-
-
58549113144
-
Spatial distribution of bacteria and Archaea and amoA gene copy numbers throughout the water column of the eastern Mediterranean Sea
-
De Corte D, Yokokawa T, Varela MM, Agogue H, Herndl GJ. (2009). Spatial distribution of bacteria and Archaea and amoA gene copy numbers throughout the water column of the eastern Mediterranean Sea. ISMEJ 3: 147-158.
-
(2009)
ISME J
, vol.3
, pp. 147-158
-
-
De Corte, D.1
Yokokawa, T.2
Varela, M.M.3
Agogue, H.4
Herndl, G.J.5
-
15
-
-
46149110769
-
Novelty and spatiotemporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama)
-
Demergasso C, Escudero L, Casamayor EO, Chong G, Balagué V, Pedrós-Alió C. (2008). Novelty and spatiotemporal heterogeneity in the bacterial diversity of hypersaline Lake Tebenquiche (Salar de Atacama). Extremophiles 12: 491-504.
-
(2008)
Extremophiles
, vol.12
, pp. 491-504
-
-
Demergasso, C.1
Escudero, L.2
Casamayor, E.O.3
Chong, G.4
Balagué, V.5
Pedrós-Alió, C.6
-
16
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DOI 10.1128/AEM.03006-05
-
DeSantis TZ, Hugenholtz P, Larsen N, Rojas M, Brodie EL, Keller K et al. (2006). Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72: 5069-5072. (Pubitemid 44078840)
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.7
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
17
-
-
0033025391
-
Indirect photometric detection of anions in capillary electrophoresis
-
DOI 10.1016/S0021-9673(98)00787-0, PII S0021967398007870
-
Doble P, Haddad PR. (1999). Indirect photometric detection of anions in capillary electrophoresis. J Chroma-togr A834: 189-212. (Pubitemid 29099783)
-
(1999)
Journal of Chromatography A
, vol.834
, Issue.1-2
, pp. 189-212
-
-
Doble, P.1
Haddad, P.R.2
-
18
-
-
68149112220
-
Environmental factors shaping the ecological niches of ammonia-oxidizing Archaea
-
Erguder T.H, Boon N, Wittebolle L, Marzorati M, Verstraete W. (2009). Environmental factors shaping the ecological niches of ammonia-oxidizing Archaea. FEMS Microbiol Rev 33: 855-869.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 855-869
-
-
Erguder, T.H.1
Boon, N.2
Wittebolle, L.3
Marzorati, M.4
Verstraete, W.5
-
19
-
-
0026499429
-
Conservation evaluation and phyloge-netic diversity
-
Faith DP. (1992). Conservation evaluation and phyloge-netic diversity. Biol Conserv 61: 1-10.
-
(1992)
Biol Conserv
, vol.61
, pp. 1-10
-
-
Faith, D.P.1
-
20
-
-
0028990026
-
Highly active microbial communities in the ice and snow cover of high mountain lakes
-
Felip M, Sattler B, Psenner R, Catalan J. (1995). Highly active microbial communities in the ice and snow cover of high mountain lakes. Appl Environ Microbiol 61: 2394-2401. (Pubitemid 26450473)
-
(1995)
Applied & Environmental Microbiology
, vol.61
, Issue.6
, pp. 2394-2401
-
-
Felip, M.1
Sattler, B.2
Psenner, R.3
Catalan, J.4
-
21
-
-
3042511624
-
High-diversity biofilm for the oxidation of sulfide-containing effluents
-
DOI 10.1007/s00253-004-1582-x
-
Ferrera I, Massana R, Casamayor EO, Balague V, Sanchez O, Pedros-Alio C et al. (2004). High-diversity biofilm for the oxidation of sulfide-contain-ing effluents. Appl Microbiol Biotechnol 64: 726-734. (Pubitemid 38822638)
-
(2004)
Applied Microbiology and Biotechnology
, vol.64
, Issue.5
, pp. 726-734
-
-
Ferrera, I.1
Massana, R.2
Casamayor, E.O.3
Balague, V.4
Sanchez, O.5
Pedros-Alio, C.6
Mas, J.7
-
22
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
DOI 10.1073/pnas.0506625102
-
Francis CA, Roberts KJ, Beman JM, Santoro AE, Oakley BB. (2005). Ubiquity and diversity of ammonia-oxidizing Archaea in water columns and sediments of the ocean. Proc Natl Acad Sci USA 102: 14683-14688. (Pubitemid 41457116)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.41
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
23
-
-
33750053594
-
Remarkably diverse and contrasting archaeal communities in a large arctic river and the coastal Arctic Ocean
-
Galand PE, Lovejoy C, Vincent WF. (2006). Remarkably diverse and contrasting archaeal communities in a large arctic river and the coastal Arctic Ocean. Aquat Microb Ecol 44: 115-126. (Pubitemid 44578588)
-
(2006)
Aquatic Microbial Ecology
, vol.44
, Issue.2
, pp. 115-126
-
-
Galand, P.E.1
Lovejoy, C.2
Vincent, W.F.3
-
24
-
-
77958043614
-
Inter-annual recurrence of archaeal assemblages in the coastal NW Mediterranean Sea (Blanes Bay Microbial Observatory)
-
Galand PE, Gutierrez-Provecho C, Massana R, Gasol JM, Casamayor EO. (2010). Inter-annual recurrence of archaeal assemblages in the coastal NW Mediterranean Sea (Blanes Bay Microbial Observatory). Limnol Oceanogr 55: 2117-2125.
-
(2010)
Limnol Oceanogr
, vol.55
, pp. 2117-2125
-
-
Galand, P.E.1
Gutierrez-Provecho, C.2
Massana, R.3
Gasol, J.M.4
Casamayor, E.O.5
-
25
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alingment editor and analysis program for Windows 95/98/NT
-
Hall TA. (1999). BioEdit: a user-friendly biological sequence alingment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41: 95-98.
-
(1999)
Nucleic Acids Symp ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
26
-
-
33646260901
-
Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarch-aeota
-
Hallam SJ, Mincer TJ, Schleper C, Preston CM, Roberts K, Richardson PM et al. (2006). Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarch-aeota. PLoS Biol 4: 520-536.
-
(2006)
PLoS Biol
, vol.4
, pp. 520-536
-
-
Hallam, S.J.1
Mincer, T.J.2
Schleper, C.3
Preston, C.M.4
Roberts, K.5
Richardson, P.M.6
-
27
-
-
67649220035
-
Diversity of Archaea and detection of crenarchaeotal amoA genes in the rivers Rhine and Tet
-
Herfort L, Kim JH, Coolen MJL, Abbas B, Schouten S, Herndl GJ et al. (2009). Diversity of Archaea and detection of crenarchaeotal amoA genes in the rivers Rhine and Tet. Aquat Microb Ecol 55: 189-201.
-
(2009)
Aquat Microb Ecol
, vol.55
, pp. 189-201
-
-
Herfort, L.1
Kim, J.H.2
Coolen, M.J.L.3
Abbas, B.4
Schouten, S.5
Herndl, G.J.6
-
28
-
-
44249087866
-
Archaea dominate the ammonia-oxidizing community in the rhizosphere of the freshwater macrophyte Littorella uniflora
-
DOI 10.1128/AEM.02802-07
-
Herrmann M, Saunders AM, Schramm A. (2008). Archaea dominate the ammonia-oxidizing community in the rhizosphere of the freshwater macrophyte. Littorellau-niflora. Appl Environ Microbiol 74: 3279-3283. (Pubitemid 351747036)
-
(2008)
Applied and Environmental Microbiology
, vol.74
, Issue.10
, pp. 3279-3283
-
-
Herrmann, M.1
Saunders, A.M.2
Schramm, A.3
-
29
-
-
58149109217
-
High similarity between bacterioneuston and airborne bacterial community compositions in a high mountain lake area
-
Hervàs A, Casamayor EO. (2009). High similarity between bacterioneuston and airborne bacterial community compositions in a high mountain lake area. FEMS Microbiol Ecol 67: 219-228.
-
(2009)
FEMS Microbiol Ecol
, vol.67
, pp. 219-228
-
-
Hervàs, A.1
Casamayor, E.O.2
-
30
-
-
66649088381
-
Viability and potential for immigration of airborne bacteria from Africa that reach high mountain lakes in Europe
-
Hervàs A, Camarero L, Reche I, Casamayor EO. (2009). Viability and potential for immigration of airborne bacteria from Africa that reach high mountain lakes in Europe. Environ. Microbiol 11: 1612-1623.
-
(2009)
Environ. Microbiol
, vol.11
, pp. 1612-1623
-
-
Hervàs, A.1
Camarero, L.2
Reche, I.3
Casamayor, E.O.4
-
31
-
-
12344309156
-
Estimating prokaryotic diversity: When are 16S rDNA libraries large enough?
-
Kemp PF, Aller JY. (2004). Estimating prokaryotic diversity: when are 16S rDNA libraries large enough? Limnol Oceanogr-Meth 2: 114-125.
-
(2004)
Limnol Oceanogr-Meth
, vol.2
, pp. 114-125
-
-
Kemp, P.F.1
Aller, J.Y.2
-
32
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
DOI 10.1038/nature03911, PII N03911
-
Konneke M, Bernhard AE, de la Torre JR, Walker CB, Waterbury JB, Stahl DA. (2005). Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437: 543-546. (Pubitemid 41613550)
-
(2005)
Nature
, vol.437
, Issue.7058
, pp. 543-546
-
-
Konneke, M.1
Bernhard, A.E.2
De La Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
33
-
-
34249862426
-
Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea
-
DOI 10.1073/pnas.0611081104
-
Lam P, Jensen MM, Lavik G, McGinnis DF, Muller B, Schubert CJ et al. (2007). Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea. Proc Nat. Acad Sci USA 104: 7104-7109. (Pubitemid 47186016)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.17
, pp. 7104-7109
-
-
Lam, P.1
Jensen, M.M.2
Lavik, G.3
McGinnis, D.F.4
Muller, B.5
Schubert, C.J.6
Amann, R.7
Thamdrup, B.8
Kuypers, M.M.M.9
-
34
-
-
63849329587
-
Revising the nitrogen cycle in the Peruvian oxygen minimum zone
-
Lam P, Lavik G, Jensen MM, van de Vossenberg J, Schmid M, Woebken D et al. (2009). Revising the nitrogen cycle in the Peruvian oxygen minimum zone. Proc Natl Acad Sci USA 106: 4752-4757.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 4752-4757
-
-
Lam, P.1
Lavik, G.2
Jensen, M.M.3
Van De Vossenberg, J.4
Schmid, M.5
Woebken, D.6
-
35
-
-
80053158633
-
Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifiant acid soil
-
Lehtovirta-Morley LE, Stoecker K, Vilcinskas A, Prosser JI, Nicol GW. (2011). Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifiant acid soil. Proc Natl Acad Sci USA 108: 15892-15897.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 15892-15897
-
-
Lehtovirta-Morley, L.E.1
Stoecker, K.2
Vilcinskas, A.3
Prosser, J.I.4
Nicol, G.W.5
-
36
-
-
33745634395
-
Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
-
DOI 10.1093/bioinformatics/btl158
-
Li W, Godzik A. (2006). Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22: 1658-1659. (Pubitemid 43985301)
-
(2006)
Bioinformatics
, vol.22
, Issue.13
, pp. 1658-1659
-
-
Li, W.1
Godzik, A.2
-
37
-
-
53949086905
-
High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study
-
Llirós M, Casamayor EO, Borrego CM. (2008). High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study. FEMS Microbiol. Ecol 66: 331-342.
-
(2008)
FEMS Microbiol. Ecol
, vol.66
, pp. 331-342
-
-
Llirós, M.1
Casamayor, E.O.2
Borrego, C.M.3
-
38
-
-
77958592618
-
Vertical distribution of ammonia oxidizing crenarchaeota and methanogens in the epipelagic waters of Lake Kivu
-
Llirós M, Gich F, Plasencia A, Auguet JC, Darchambeau F, Casamayor EO et al. (2010). Vertical distribution of ammonia oxidizing crenarchaeota and methanogens in the epipelagic waters of Lake Kivu. Appl Environ Microbiol 76: 6853-6863.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 6853-6863
-
-
Llirós, M.1
Gich, F.2
Plasencia, A.3
Auguet, J.C.4
Darchambeau, F.5
Casamayor, E.O.6
-
39
-
-
84856701157
-
Winter to Spring changes in the slush bacterial community composition of a high mountain lake (Lake Redon, Pyrenees)
-
Llorens-Marès T, Auguet JC, Casamayor EO. (2012). Winter to Spring changes in the slush bacterial community composition of a high mountain lake (Lake Redon, Pyrenees). Environ Microbiol Rep 4: 50-56.
-
(2012)
Environ Microbiol Rep
, vol.4
, pp. 50-56
-
-
Llorens-Marès, T.1
Auguet, J.C.2
Casamayor, E.O.3
-
40
-
-
36849050728
-
Archaeal and bacterial community composition of a pristine coastal aquifer in Doñana National Park, Spain
-
López-Archilla AI, Moreira D, Velasco S, López- García P. (2007). Archaeal and bacterial community composition of a pristine coastal aquifer in Doñana National Park, Spain. Aquat Microb Ecol 47: 123-139. (Pubitemid 350219040)
-
(2007)
Aquatic Microbial Ecology
, vol.47
, Issue.2
, pp. 123-139
-
-
Lopez-Archilla, A.I.1
Moreira, D.2
Velasco, S.3
Lopez-Garcia, P.4
-
41
-
-
33748713890
-
UniFrac-An online tool for comparing microbial community diversity in a phylogenetic context
-
Lozupone C, Hamady M, Knight R. (2006). UniFrac-An online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinfor-matics 7: 371.
-
(2006)
BMC Bioinfor-matics
, vol.7
, pp. 371
-
-
Lozupone, C.1
Hamady, M.2
Knight, R.3
-
42
-
-
2542523843
-
ARB: A software environment for sequence data
-
DOI 10.1093/nar/gkh293
-
Ludwig W, Strunk O, Westram R, Richter L, Meier H, Yadhukumar et al. (2004). ARB: a software environment for sequence data. Nucl Acids Res 32: 1363-1371. (Pubitemid 38854737)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.4
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar, A.6
Buchner, A.7
Lai, T.8
Steppi, S.9
Jacob, G.10
Forster, W.11
Brettske, I.12
Gerber, S.13
Ginhart, A.W.14
Gross, O.15
Grumann, S.16
Hermann, S.17
Jost, R.18
Konig, A.19
Liss, T.20
Lussbmann, R.21
May, M.22
Nonhoff, B.23
Reichel, B.24
Strehlow, R.25
Stamatakis, A.26
Stuckmann, N.27
Vilbig, A.28
Lenke, M.29
Ludwig, T.30
Bode, A.31
Schleifer, K.-H.32
more..
-
43
-
-
70350052417
-
Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
-
Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA. (2009). Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature 461: 976-979.
-
(2009)
Nature
, vol.461
, pp. 976-979
-
-
Martens-Habbena, W.1
Berube, P.M.2
Urakawa, H.3
De La Torre, J.R.4
Stahl, D.A.5
-
44
-
-
0035133496
-
Fitting multivariate models to community data: A comment on distance-based redundancy analysis
-
McArdle B. (2001). Fitting multivariate models to community data: a comment on distance-based redundancy analysis. Ecology 82: 290-297. (Pubitemid 32106404)
-
(2001)
Ecology
, vol.82
, Issue.1
, pp. 290-297
-
-
McArdle, B.H.1
Anderson, M.J.2
-
45
-
-
79956371461
-
Biofilm recovery in a wastewater treatment plant-influenced stream and spatial segregation of ammonia-oxidizing microbial populations
-
Merbt S, Auguet JC, Casamayor EO, Martí E. (2011). Biofilm recovery in a wastewater treatment plant-influenced stream and spatial segregation of ammonia-oxidizing microbial populations. Limnol Oceanogr 56: 1054-1064.
-
(2011)
Limnol Oceanogr
, vol.56
, pp. 1054-1064
-
-
Merbt, S.1
Auguet, J.C.2
Casamayor, E.O.3
Martí, E.4
-
46
-
-
84855511258
-
Differential photoinhibition of bacterial and archaeal ammonia oxidation
-
Merbt S, Stahl DA, Casamayor EO, Marti E, Nicol GW, Prosser JI. (2012). Differential photoinhibition of bacterial and archaeal ammonia oxidation. FEMS Microbiol Lett 327: 41-46.
-
(2012)
FEMS Microbiol Lett
, vol.327
, pp. 41-46
-
-
Merbt, S.1
Stahl, D.A.2
Casamayor, E.O.3
Marti, E.4
Nicol, G.W.5
Prosser, J.I.6
-
47
-
-
34247847886
-
Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre
-
DOI 10.1111/j.1462-2920.2007.01239.x
-
Mincer TJ, Church MJ, Taylor LT, Preston C, Kar DM, DeLong EF. (2007). Quantitative distribution of presumptive archaeal and bacterial nitrifiers in Monterey Bay and the North Pacific Subtropical Gyre. Environ Microbiol 9: 1162-1175. (Pubitemid 46697272)
-
(2007)
Environmental Microbiology
, vol.9
, Issue.5
, pp. 1162-1175
-
-
Mincer, T.J.1
Church, M.J.2
Taylor, L.T.3
Preston, C.4
Karl, D.M.5
DeLong, E.F.6
-
48
-
-
80053642618
-
Thaumarch-aeotes abundant in refinery nitrifying sludges express amoA but are not obligate autotrophic ammonia oxidizers
-
Mussmann M, Brito I, Pitcher A, Sinninghe Damsté JS, Hatzenpichler R, Richter A et al. (2011). Thaumarch-aeotes abundant in refinery nitrifying sludges express amoA but are not obligate autotrophic ammonia oxidizers. Proc Natl Acad Sci USA 108: 16771-16776.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 16771-16776
-
-
Mussmann, M.1
Brito, I.2
Pitcher, A.3
Sinninghe Damsté, J.S.4
Hatzenpichler, R.5
Richter, A.6
-
49
-
-
26844543826
-
-
version 1
-
Oksanen J, Kindt R, Legendre P, O'hara B, Simpson GL, Stevens MHH. (2008). Vegan: community Ecology Package. version 1: 11-14; http://vegan.r- forge. r-project.org.
-
(2008)
Vegan: Community Ecology Package
, pp. 11-14
-
-
Oksanen, J.1
Kindt, R.2
Legendre, P.3
O'Hara, B.4
Simpson, G.L.5
Stevens, M.H.H.6
-
50
-
-
84856577796
-
AmoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions
-
Pester M, Rattei T, Flechl S, Gröngröft A, Richter A, Overmann J et al. (2012). AmoA-based consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions. Environ Microbiol 14: 525-539.
-
(2012)
Environ Microbiol
, vol.14
, pp. 525-539
-
-
Pester, M.1
Rattei, T.2
Flechl, S.3
Gröngröft, A.4
Richter, A.5
Overmann, J.6
-
51
-
-
61449179310
-
Vertical structure of archaeal communities and the distribution of ammonia monooxygenase A gene variants in two meromictic High Arctic lakes
-
Pouliot J, Galand PE, Lovejoy C, Vincent WF. (2009). Vertical structure of archaeal communities and the distribution of ammonia monooxygenase A gene variants in two meromictic High Arctic lakes. Environ Microbiol 11: 687-699.
-
(2009)
Environ Microbiol
, vol.11
, pp. 687-699
-
-
Pouliot, J.1
Galand, P.E.2
Lovejoy, C.3
Vincent, W.F.4
-
52
-
-
66149126961
-
Effect of Saharan dust inputs on bacterial activity and community composition in Mediterranean lakes and reservoirs
-
Reche I, Ortega-Retuerta E, Romera O, Pulido-Villena E, Morales-Baquero R, Casamayor EO. (2009). Effect of Saharan dust inputs on bacterial activity and community composition in Mediterranean lakes and reservoirs. Limnol Oceanogr 54: 869-879.
-
(2009)
Limnol Oceanogr
, vol.54
, pp. 869-879
-
-
Reche, I.1
Ortega-Retuerta, E.2
Romera, O.3
Pulido-Villena, E.4
Morales-Baquero, R.5
Casamayor, E.O.6
-
53
-
-
77950571122
-
Responses of ammonia-oxidizing bacterial and archaeal populations to organic nitrogen amendments in low-nutrient ground-water
-
Reed D.W, Smith JM, Francis CA, Fujita Y. (2009). Responses of ammonia-oxidizing bacterial and archaeal populations to organic nitrogen amendments in low-nutrient ground-water. Appl Environ Microbiol 76: 2517-2523.
-
(2009)
Appl Environ Microbiol
, vol.76
, pp. 2517-2523
-
-
Reed, D.W.1
Smith, J.M.2
Francis, C.A.3
Fujita, Y.4
-
54
-
-
0030814870
-
The ammonia monooxygenase structural gene amoa as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
-
Rotthauwe JH, Witzel KP, Liesack W. (1997). The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63: 4704-4712. (Pubitemid 27524201)
-
(1997)
Applied and Environmental Microbiology
, vol.63
, Issue.12
, pp. 4704-4712
-
-
Rotthauwe, J.-H.1
Witzel, K.-P.2
Liesack, W.3
-
55
-
-
34447540346
-
Isolation of key methanogens for global methane emission from rice paddy fields: A novel isolate affiliated with the clone cluster rice cluster
-
DOI 10.1128/AEM.03008-06
-
Sakai S, Imachi H, Sekiguchi Y, Ohashi A, Harada H, Kamagata Y. (2007). Isolation of key methanogens for global methane emission from rice paddy fields: a novel isolate affiliated with the clone cluster rice cluster I. Appl Environ Microbiol 3: 4326-4331. (Pubitemid 47068174)
-
(2007)
Applied and Environmental Microbiology
, vol.73
, Issue.13
, pp. 4326-4331
-
-
Sakai, S.1
Imachi, H.2
Sekiguchi, Y.3
Ohashi, A.4
Harada, H.5
Kamagata, Y.6
-
56
-
-
36248931414
-
Molecular characterization of microbial communities in deep coal seam groundwater of northern Japan
-
DOI 10.1111/j.1472-4669.2007.00123.x
-
Shimizu S, Akiyama M, Naganuma T, Fujioka M, Nako M, Ishijima Y. (2007). Molecular characterization of microbial communities in deep coalseam groundwater of northern Japan. Geobiology 5: 423-433. (Pubitemid 350135318)
-
(2007)
Geobiology
, vol.5
, Issue.4
, pp. 423-433
-
-
Shimizu, S.1
Akiyama, M.2
Naganuma, T.3
Fujioka, M.4
Nako, M.5
Ishijima, Y.6
-
57
-
-
84944813042
-
Determination of ammonia in natural waters by the phenolhypochlorite method
-
Solórzano L. (1969). Determination of ammonia in natural waters by the phenolhypochlorite method. Limnol Oceanogr 14: 799-801.
-
(1969)
Limnol Oceanogr
, vol.14
, pp. 799-801
-
-
Solórzano, L.1
-
58
-
-
0035656111
-
Archaeal Diversity in Waters from Deep South African Gold Mines
-
DOI 10.1128/AEM.67.21.5750-5760.2001
-
Takai K, Moser DP, DeFlaun M, Onstott TC, Fredrickson JK. (2001). Archaeal diversity in waters from deep South African gold mines. Appl Environ Microbiol 67: 5750-5760. (Pubitemid 33641014)
-
(2001)
Applied and Environmental Microbiology
, vol.67
, Issue.12
, pp. 5750-5760
-
-
Takai, K.1
Moser, D.P.2
DeFlaun, M.3
Onstott, T.C.4
Fredrickson, J.K.5
-
59
-
-
28644435323
-
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
-
DOI 10.1111/j.1462-2920.2005.00906.x
-
Treusch AH, Leininger S, Kletzin A, Schuster SC, Klenk HP, Schleper C. (2005). Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivate mesophilic crenarchaeota in nitrogen cycling. Environ Microbiol 7: 1985-1995. (Pubitemid 41752386)
-
(2005)
Environmental Microbiology
, vol.7
, Issue.12
, pp. 1985-1995
-
-
Treusch, A.H.1
Leininger, S.2
Kietzin, A.3
Schuster, S.C.4
Klenk, H.-P.5
Schleper, C.6
-
60
-
-
67650492058
-
Ammonia-oxidizing bacteria and archaea in ground-water treatment and drinking water distribution systems
-
van der Wielen P, Voost S, van der Kooij D. (2009). Ammonia-oxidizing bacteria and archaea in ground-water treatment and drinking water distribution systems. Appl Environ Microbiol 75: 4687-4695.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 4687-4695
-
-
Van Der Wielen, P.1
Voost, S.2
Van Der Kooij, D.3
-
61
-
-
11144354360
-
Environmental Genome Shotgun Sequencing of the Sargasso Sea
-
DOI 10.1126/science.1093857
-
Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA et al. (2004). Environmental genome shotgun sequencing of the Sargasso Sea. Science 304: 66-74. (Pubitemid 38451457)
-
(2004)
Science
, vol.304
, Issue.5667
, pp. 66-74
-
-
Venter, J.C.1
Remington, K.2
Heidelberg, J.F.3
Halpern, A.L.4
Rusch, D.5
Eisen, J.A.6
Wu, D.7
Paulsen, I.8
Nelson, K.E.9
Nelson, W.10
Fouts, D.E.11
Levy, S.12
Knap, A.H.13
Lomas, M.W.14
Nealson, K.15
White, O.16
Peterson, J.17
Hoffman, J.18
Parsons, R.19
Baden-Tillson, H.20
Pfannkoch, C.21
Rogers, Y.-H.22
Smith, H.O.23
more..
-
62
-
-
54949087158
-
Global occurrence of archaeal amoA genes in terrestrial hot springs
-
Zhang CL, Ye Q, Huang Z, Li W, Chen J, Song Z et al. (2008). Global occurrence of archaeal amoA genes in terrestrial hot springs. Appl Environ Microbiol 74: 6417-6426.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 6417-6426
-
-
Zhang, C.L.1
Ye, Q.2
Huang, Z.3
Li, W.4
Chen, J.5
Song, Z.6
|