-
1
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel DP, (2004) MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116, 281-297.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
2
-
-
1842816517
-
Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways
-
Lee YS, Nakahara K, Pham JW, Kim K, He Z, Sontheimer EJ, &, Carthew RW, (2004) Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways. Cell 117, 69-81.
-
(2004)
Cell
, vol.117
, pp. 69-81
-
-
Lee, Y.S.1
Nakahara, K.2
Pham, J.W.3
Kim, K.4
He, Z.5
Sontheimer, E.J.6
Carthew, R.W.7
-
3
-
-
0037197805
-
Grb2 and Nck act cooperatively to promote actin-based motility of vaccinia virus
-
Scaplehorn N, Holmstrom A, Moreau V, Frischknecht F, Reckmann I, &, Way M, (2002) Grb2 and Nck act cooperatively to promote actin-based motility of vaccinia virus. Curr Biol 12, 740-745.
-
(2002)
Curr Biol
, vol.12
, pp. 740-745
-
-
Scaplehorn, N.1
Holmstrom, A.2
Moreau, V.3
Frischknecht, F.4
Reckmann, I.5
Way, M.6
-
4
-
-
34447097693
-
Intronic microRNA precursors that bypass Drosha processing
-
Ruby JG, Jan CH, &, Bartel DP, (2007) Intronic microRNA precursors that bypass Drosha processing. Nature 448, 83-86.
-
(2007)
Nature
, vol.448
, pp. 83-86
-
-
Ruby, J.G.1
Jan, C.H.2
Bartel, D.P.3
-
5
-
-
35348933779
-
Mammalian mirtron genes
-
Berezikov E, Chung WJ, Willis J, Cuppen E, &, Lai EC, (2007) Mammalian mirtron genes. Mol Cell 28, 328-336.
-
(2007)
Mol Cell
, vol.28
, pp. 328-336
-
-
Berezikov, E.1
Chung, W.J.2
Willis, J.3
Cuppen, E.4
Lai, E.C.5
-
6
-
-
73649109602
-
A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral microRNAs
-
Bogerd HP, Karnowski HW, Cai X, Shin J, Pohlers M, &, Cullen BR, (2010) A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral microRNAs. Mol Cell 37, 135-142.
-
(2010)
Mol Cell
, vol.37
, pp. 135-142
-
-
Bogerd, H.P.1
Karnowski, H.W.2
Cai, X.3
Shin, J.4
Pohlers, M.5
Cullen, B.R.6
-
7
-
-
57149094023
-
SnoRNA, a novel precursor of microRNA in Giardia lamblia
-
Saraiya AA, &, Wang CC, (2008) snoRNA, a novel precursor of microRNA in Giardia lamblia. PLoS Pathog 4, e1000224.
-
(2008)
PLoS Pathog
, vol.4
-
-
Saraiya, A.A.1
Wang, C.C.2
-
8
-
-
33344477448
-
Genomics of microRNA
-
Kim VN, &, Nam JW, (2006) Genomics of microRNA. Trends Genet 22, 165-173.
-
(2006)
Trends Genet
, vol.22
, pp. 165-173
-
-
Kim, V.N.1
Nam, J.W.2
-
9
-
-
60149095444
-
Most mammalian mRNAs are conserved targets of microRNAs
-
Friedman RC, Farh KK, Burge CB, &, Bartel DP, (2009) Most mammalian mRNAs are conserved targets of microRNAs. Genome Res 19, 92-105.
-
(2009)
Genome Res
, vol.19
, pp. 92-105
-
-
Friedman, R.C.1
Farh, K.K.2
Burge, C.B.3
Bartel, D.P.4
-
10
-
-
0037447334
-
The microRNAs of Caenorhabditis elegans
-
Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, Rhoades MW, Burge CB, &, Bartel DP, (2003) The microRNAs of Caenorhabditis elegans. Genes Dev 17, 991-1008.
-
(2003)
Genes Dev
, vol.17
, pp. 991-1008
-
-
Lim, L.P.1
Lau, N.C.2
Weinstein, E.G.3
Abdelhakim, A.4
Yekta, S.5
Rhoades, M.W.6
Burge, C.B.7
Bartel, D.P.8
-
11
-
-
79960075244
-
MicroRNA-9: Functional evolution of a conserved small regulatory RNA
-
Yuva-Aydemir Y, Simkin A, Gascon E, &, Gao FB, (2011) MicroRNA-9: functional evolution of a conserved small regulatory RNA. RNA Biol 8, 557-564.
-
(2011)
RNA Biol
, vol.8
, pp. 557-564
-
-
Yuva-Aydemir, Y.1
Simkin, A.2
Gascon, E.3
Gao, F.B.4
-
12
-
-
0042814908
-
Expression of the 22 nucleotide let-7 heterochronic RNA throughout the Metazoa: A role in life history evolution?
-
Pasquinelli AE, McCoy A, Jimenez E, Salo E, Ruvkun G, Martindale MQ, &, Baguna J, (2003) Expression of the 22 nucleotide let-7 heterochronic RNA throughout the Metazoa: a role in life history evolution? Evol Dev 5, 372-378.
-
(2003)
Evol Dev
, vol.5
, pp. 372-378
-
-
Pasquinelli, A.E.1
McCoy, A.2
Jimenez, E.3
Salo, E.4
Ruvkun, G.5
Martindale, M.Q.6
Baguna, J.7
-
13
-
-
34548539200
-
Phylogenetic distribution of microRNAs supports the basal position of acoel flatworms and the polyphyly of Platyhelminthes
-
Sempere LF, Martinez P, Cole C, Baguna J, &, Peterson KJ, (2007) Phylogenetic distribution of microRNAs supports the basal position of acoel flatworms and the polyphyly of Platyhelminthes. Evol Dev 9, 409-415.
-
(2007)
Evol Dev
, vol.9
, pp. 409-415
-
-
Sempere, L.F.1
Martinez, P.2
Cole, C.3
Baguna, J.4
Peterson, K.J.5
-
14
-
-
67650998880
-
Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
-
Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, &, Graveley BR, (2009) Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea. RNA 15, 1483-1491.
-
(2009)
RNA
, vol.15
, pp. 1483-1491
-
-
Lu, Y.C.1
Smielewska, M.2
Palakodeti, D.3
Lovci, M.T.4
Aigner, S.5
Yeo, G.W.6
Graveley, B.R.7
-
15
-
-
58149202186
-
Identification and characterization of novel microRNAs from Schistosoma japonicum
-
Xue X, Sun J, Zhang Q, Wang Z, Huang Y, &, Pan W, (2008) Identification and characterization of novel microRNAs from Schistosoma japonicum. PLoS One 3, e4034.
-
(2008)
PLoS One
, vol.3
-
-
Xue, X.1
Sun, J.2
Zhang, Q.3
Wang, Z.4
Huang, Y.5
Pan, W.6
-
16
-
-
77949526665
-
Genome-wide identification of Schistosoma japonicum microRNAs using a deep-sequencing approach
-
Huang J, Hao P, Chen H, Hu W, Yan Q, Liu F, &, Han ZG, (2009) Genome-wide identification of Schistosoma japonicum microRNAs using a deep-sequencing approach. PLoS One 4, e8206.
-
(2009)
PLoS One
, vol.4
-
-
Huang, J.1
Hao, P.2
Chen, H.3
Hu, W.4
Yan, Q.5
Liu, F.6
Han, Z.G.7
-
17
-
-
79951809730
-
Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes
-
Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, &, Rosenzvit M, (2011) Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes. Int J Parasitol 41, 439-448.
-
(2011)
Int J Parasitol
, vol.41
, pp. 439-448
-
-
Cucher, M.1
Prada, L.2
Mourglia-Ettlin, G.3
Dematteis, S.4
Camicia, F.5
Asurmendi, S.6
Rosenzvit, M.7
-
18
-
-
84863493254
-
Characterization of microRNAs in Taenia saginata of zoonotic significance by Solexa deep sequencing and bioinformatics analysis
-
Ai L, Xu MJ, Chen MX, Zhang YN, Chen SH, Guo J, Cai YC, Zhou XN, Zhu XQ, &, Chen JX, (2012) Characterization of microRNAs in Taenia saginata of zoonotic significance by Solexa deep sequencing and bioinformatics analysis. Parasitol Res 110, 2373-2378.
-
(2012)
Parasitol Res
, vol.110
, pp. 2373-2378
-
-
Ai, L.1
Xu, M.J.2
Chen, M.X.3
Zhang, Y.N.4
Chen, S.H.5
Guo, J.6
Cai, Y.C.7
Zhou, X.N.8
Zhu, X.Q.9
Chen, J.X.10
-
19
-
-
57649114766
-
Antigenic variation in Giardia lamblia is regulated by RNA interference
-
Prucca CG, Slavin I, Quiroga R, Elias EV, Rivero FD, Saura A, Carranza PG, &, Lujan HD, (2008) Antigenic variation in Giardia lamblia is regulated by RNA interference. Nature 456, 750-754.
-
(2008)
Nature
, vol.456
, pp. 750-754
-
-
Prucca, C.G.1
Slavin, I.2
Quiroga, R.3
Elias, E.V.4
Rivero, F.D.5
Saura, A.6
Carranza, P.G.7
Lujan, H.D.8
-
20
-
-
0036364352
-
Surface antigenic variation in Giardia lamblia
-
Nash TE, (2002) Surface antigenic variation in Giardia lamblia. Mol Microbiol 45, 585-590.
-
(2002)
Mol Microbiol
, vol.45
, pp. 585-590
-
-
Nash, T.E.1
-
21
-
-
44749086785
-
MicroRNA switches in Trypanosoma brucei
-
Mallick B, Ghosh Z, &, Chakrabarti J, (2008) MicroRNA switches in Trypanosoma brucei. Biochem Biophys Res Commun 372, 459-463.
-
(2008)
Biochem Biophys Res Commun
, vol.372
, pp. 459-463
-
-
Mallick, B.1
Ghosh, Z.2
Chakrabarti, J.3
-
22
-
-
77955920974
-
MicroRNAs: A role in drug resistance in parasitic nematodes?
-
Devaney E, Winter AD, &, Britton C, (2010) microRNAs: a role in drug resistance in parasitic nematodes? Trends Parasitol 26, 428-433.
-
(2010)
Trends Parasitol
, vol.26
, pp. 428-433
-
-
Devaney, E.1
Winter, A.D.2
Britton, C.3
-
23
-
-
78650664738
-
Description of Hymenolepis microstoma (Nottingham strain): A classical tapeworm model for research in the genomic era
-
Cunningham LJ, &, Olson PD, (2010) Description of Hymenolepis microstoma (Nottingham strain): a classical tapeworm model for research in the genomic era. Parasit Vectors 3, 123.
-
(2010)
Parasit Vectors
, vol.3
, pp. 123
-
-
Cunningham, L.J.1
Olson, P.D.2
-
24
-
-
33749507383
-
Tumour-related microRNAs functions in Caenorhabditis elegans
-
Jannot G, &, Simard MJ, (2006) Tumour-related microRNAs functions in Caenorhabditis elegans. Oncogene 25, 6197-6201.
-
(2006)
Oncogene
, vol.25
, pp. 6197-6201
-
-
Jannot, G.1
Simard, M.J.2
-
25
-
-
28144458897
-
LIN-12/Notch activation leads to microRNA-mediated down-regulation of Vav in C. Elegans
-
Yoo AS, &, Greenwald I, (2005) LIN-12/Notch activation leads to microRNA-mediated down-regulation of Vav in C. elegans. Science 310, 1330-1333.
-
(2005)
Science
, vol.310
, pp. 1330-1333
-
-
Yoo, A.S.1
Greenwald, I.2
-
26
-
-
77649205882
-
An 'in-depth' description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
-
Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, &, Pan W, (2010) An 'in-depth' description of the small non-coding RNA population of Schistosoma japonicum schistosomulum. PLoS Negl Trop Dis 4, e596.
-
(2010)
PLoS Negl Trop Dis
, vol.4
-
-
Wang, Z.1
Xue, X.2
Sun, J.3
Luo, R.4
Xu, X.5
Jiang, Y.6
Zhang, Q.7
Pan, W.8
-
27
-
-
80053446656
-
MicroRNA predictors of longevity in Caenorhabditis elegans
-
e1002306
-
Pincus Z, Smith-Vikos T, &, Slack FJ, (2011) MicroRNA predictors of longevity in Caenorhabditis elegans. PLoS Genet 7, e1002306.
-
(2011)
PLoS Genet
, vol.7
-
-
Pincus, Z.1
Smith-Vikos, T.2
Slack, F.J.3
-
28
-
-
81055130277
-
MicroRNAs play critical roles in the survival and recovery of Caenorhabditis elegans from starvation-induced L1 diapause
-
Zhang X, Zabinsky R, Teng Y, Cui M, &, Han M, (2011) microRNAs play critical roles in the survival and recovery of Caenorhabditis elegans from starvation-induced L1 diapause. Proc Natl Acad Sci USA 108, 17997-18002.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 17997-18002
-
-
Zhang, X.1
Zabinsky, R.2
Teng, Y.3
Cui, M.4
Han, M.5
-
29
-
-
84859466185
-
The C. Elegans microRNA mir-71 acts in neurons to promote germline-mediated longevity through regulation of DAF-16/FOXO
-
Boulias K, &, Horvitz HR, (2012) The C. elegans microRNA mir-71 acts in neurons to promote germline-mediated longevity through regulation of DAF-16/FOXO. Cell Metab 15, 439-450.
-
(2012)
Cell Metab
, vol.15
, pp. 439-450
-
-
Boulias, K.1
Horvitz, H.R.2
-
30
-
-
34249945067
-
MicroRNA genes are frequently located near mouse cancer susceptibility loci
-
Sevignani C, Calin GA, Nnadi SC, Shimizu M, Davuluri RV, Hyslop T, Demant P, Croce CM, &, Siracusa LD, (2007) MicroRNA genes are frequently located near mouse cancer susceptibility loci. Proc Natl Acad Sci USA 104, 8017-8022.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 8017-8022
-
-
Sevignani, C.1
Calin, G.A.2
Nnadi, S.C.3
Shimizu, M.4
Davuluri, R.V.5
Hyslop, T.6
Demant, P.7
Croce, C.M.8
Siracusa, L.D.9
-
31
-
-
38849096973
-
MiR-10 represses HoxB1a and HoxB3a in zebrafish
-
Woltering JM, &, Durston AJ, (2008) MiR-10 represses HoxB1a and HoxB3a in zebrafish. PLoS One 3, e1396.
-
(2008)
PLoS One
, vol.3
-
-
Woltering, J.M.1
Durston, A.J.2
-
32
-
-
80052796956
-
The miR-10 microRNA precursor family
-
Tehler D, Hoyland-Kroghsbo NM, &, Lund AH, (2011) The miR-10 microRNA precursor family. RNA Biol 8, 728-734.
-
(2011)
RNA Biol
, vol.8
, pp. 728-734
-
-
Tehler, D.1
Hoyland-Kroghsbo, N.M.2
Lund, A.H.3
-
33
-
-
78651293534
-
MiRBase: Integrating microRNA annotation and deep-sequencing data
-
Kozomara A, &, Griffiths-Jones S, (2011) miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res 39, D152-157.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
34
-
-
0034053725
-
A greedy algorithm for aligning DNA sequences
-
Zhang Z, Schwartz S, Wagner L, &, Miller W, (2000) A greedy algorithm for aligning DNA sequences. J Comput Biol 7, 203-214.
-
(2000)
J Comput Biol
, vol.7
, pp. 203-214
-
-
Zhang, Z.1
Schwartz, S.2
Wagner, L.3
Miller, W.4
-
35
-
-
0028196714
-
From sequences to shapes and back: A case study in RNA secondary structures
-
Schuster P, Fontana W, Stadler PF, &, Hofacker IL, (1994) From sequences to shapes and back: a case study in RNA secondary structures. Proc Biol Sci 255, 279-284.
-
(1994)
Proc Biol Sci
, vol.255
, pp. 279-284
-
-
Schuster, P.1
Fontana, W.2
Stadler, P.F.3
Hofacker, I.L.4
-
36
-
-
74549125386
-
SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
-
Gouy M, Guindon S, &, Gascuel O, (2010) SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27, 221-224.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
37
-
-
58049218990
-
TOPALi v2: A rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops
-
Milne I, Lindner D, Bayer M, Husmeier D, McGuire G, Marshall DF, &, Wright F, (2009) TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. Bioinformatics 25, 126-127.
-
(2009)
Bioinformatics
, vol.25
, pp. 126-127
-
-
Milne, I.1
Lindner, D.2
Bayer, M.3
Husmeier, D.4
McGuire, G.5
Marshall, D.F.6
Wright, F.7
|