The miR-10 microRNA precursor family

RNA Biology

Volumn 8, Issue 5, 2011, Pages

  Tehler, Disa ^a   Høyland Kroghsbo, Nina Molin ^a   Lund, Anders H ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Cancer; Evolution; HOX genes; miR 10; miR 100; Retinoic acid

Indexed keywords

MICRORNA; MICRORNA 10; RETINOIC ACID; UNCLASSIFIED DRUG; HOTAIR LONG UNTRANSLATED RNA, HUMAN; LONG UNTRANSLATED RNA; MIRN10 MICRORNA, HUMAN; MIRN100 MICRORNA, HUMAN; TRANSCRIPTION FACTOR;

3' UNTRANSLATED REGION; ACUTE GRANULOCYTIC LEUKEMIA; ANTINEOPLASTIC ACTIVITY; BREAST CANCER; CENTRAL NERVOUS SYSTEM TUMOR; CHRONIC LYMPHATIC LEUKEMIA; CHRONIC MYELOID LEUKEMIA; CLEAR CELL CARCINOMA; COLON CANCER; DOWN REGULATION; DRUG MECHANISM; DRUG RESPONSE; ESOPHAGUS CANCER; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENE FUNCTION; GENETIC CONSERVATION; GENOME ANALYSIS; GLIOBLASTOMA; HEAD AND NECK CARCINOMA; HOX GENE; HUMAN; KIDNEY CARCINOMA; LIVER CELL CARCINOMA; METASTASIS; MOLECULAR EVOLUTION; MULTIGENE FAMILY; NASOPHARYNX CARCINOMA; NEUROBLASTOMA; NEUROFIBROMATOSIS; NONHUMAN; REVIEW; SQUAMOUS CELL CARCINOMA; TRANSCRIPTION REGULATION; UPREGULATION; ANIMAL; GENETICS; HOMEOBOX; NEOPLASM;

ANIMALS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, HOMEOBOX; HUMANS; MICRORNAS; NEOPLASMS; RNA, LONG UNTRANSLATED; TRANSCRIPTION FACTORS;

EID: 80052796956     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.8.5.16324     Document Type: Review

References (60)

1. Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, et al. The deep evolution of metazoan microRNAs. Evol Dev 2009; 11:50-68.
2. Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, et al. Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals. Nature 2008; 455:1193-7.
3. Griffiths-Jones S, Hui JH, Marco A, Ronshaugen M. MicroRNA evolution by arm switching. EMBO Rep 2011.
4. Tanzer A, Amemiya CT, Kim CB, Stadler PF. Evolution of microRNAs located within Hox gene clusters. J Exp Zool B Mol Dev Evol 2005; 304:75-85. (Pubitemid 40346326)
5. Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC. Evolution, biogenesis, expression and target predictions of a substantially expanded set of Drosophila microRNAs. Genome Res 2007; 17:1850-64. (Pubitemid 351360008)
6. Lemons D, McGinnis W. Genomic evolution of Hox gene clusters. Science 2006; 313:1918-22. (Pubitemid 44497992)
7. Stark A, Kheradpour P, Parts L, Brennecke J, Hodges E, Hannon GJ, et al. Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes. Genome Res 2007; 17:1865-79. (Pubitemid 351360009)
8. Brennecke J, Stark A, Russell RB, Cohen SM. Principles of microRNA-target recognition. PLoS Biol 2005; 3:85.
9. Enright AJ, John B, Gaul U, Tuschl T, Sander C, Marks DS. MicroRNA targets in Drosophila. Genome Biol 2003; 5:1.
10. Aboobaker AA, Blaxter ML. Hox Gene Loss during Dynamic Evolution of the Nematode Cluster. Curr Biol 2003; 13:37-40. (Pubitemid 36080620)
11. Zhao Z, Boyle TJ, Liu Z, Murray JI, Wood WB, Waterston RH. A negative regulatory loop between microRNA and Hox gene controls posterior identities in Caenorhabditis elegans. PLoS Genet 2010; 6.
12. Shaw WR, Armisen J, Lehrbach NJ, Miska EA. The conserved miR-51 microRNA family is redundantly required for embryonic development and pharynx attachment in Caenorhabditis elegans. Genetics 2010; 185:897-905.
13. Woltering JM, Durston AJ. MiR-10 represses HoxB1a and HoxB3a in zebrafish. PLoS One 2008; 3:1396.
14. Mansfield JH, Harfe BD, Nissen R, Obenauer J, Srineel J, Chaudhuri A, et al. MicroRNA-responsive 'sensor' transgenes uncover Hox-like and other developmentally regulated patterns of vertebrate microRNA expression. Nat Genet 2004; 36:1079-83. (Pubitemid 41184469)
15. Wang LL, Zhang Z, Li Q, Yang R, Pei X, Xu Y, et al. Ethanol exposure induces differential microRNA and target gene expression and teratogenic effects which can be suppressed by folic acid supplementation. Hum Reprod 2009; 24:562-79.
16. Huang H, Xie C, Sun X, Ritchie RP, Zhang J, Chen YE. miR-10a contributes to retinoid acid-induced smooth muscle cell differentiation. J Biol Chem 2010; 285:9383-9.
17. Ma L, Teruya-Feldstein J, Weinberg RA. Tumour invasion and metastasis initiated by microRNA-10b in breast cancer. Nature 2007; 449:682-8. (Pubitemid 47552092)
18. Zhou R, Hu G, Liu J, Gong AY, Drescher KM, Chen XM. NFkappaB p65-dependent transactivation of miRNA genes following Cryptosporidium parvum infection stimulates epithelial cell immune responses. PLoS Pathog 2009; 5:1000681.
19. Fang Y, Shi C, Manduchi E, Civelek M, Davies PF. MicroRNA-10a regulation of proinflammatory phenotype in athero-susceptible endothelium in vivo and in vitro. Proc Natl Acad Sci USA 2010; 107:13450-5.
20. Han L, Witmer PD, Casey E, Valle D, Sukumar S. DNA methylation regulates MicroRNA expression. Cancer Biol Ther 2007; 6:1284-8. (Pubitemid 351590384)
21. Mainguy G, In der Rieden PM, Berezikov E, Woltering JM, Plasterk RH, Durston AJ. A position-dependent organisation of retinoid response elements is conserved in the vertebrate Hox clusters. Trends Genet 2003; 19:476-9. (Pubitemid 37101084)
22. Meseguer S, Mudduluru G, Escamilla JM, Allgayer H, Barettino D. Micro-RNAs-10a and -10b contribute to retinoic acid-induced differentiation of neuroblastoma cells and target the alternative splicing regulatory factor SFRS1 (SF2/ASF). J Biol Chem 2010.
23. Foley NH, Bray I, Watters KM, Das S, Bryan K, Bernas T, et al. MicroRNAs 10a and 10b are potent inducers of neuroblastoma cell differentiation through targeting of nuclear receptor corepressor 2. Cell Death Differ 2011.
24. Weiss FU, Marques IJ, Woltering JM, Vlecken DH, Aghdassi A, Partecke LI, et al. Retinoic acid receptor antagonists inhibit miR-10a expression and block metastatic behavior of pancreatic cancer. Gastroenterology 2009; 137:2136-45.
25. Sidell N. Retinoic acid-induced growth inhibition and morphologic differentiation of human neuroblastoma cells in vitro. J Natl Cancer Inst 1982; 68:589-96. (Pubitemid 12078843)
26. Joshi S, Guleria R, Pan J, DiPette D, Singh US. Retinoic acid receptors and tissue-transglutaminase mediate short-term effect of retinoic acid on migration and invasion of neuroblastoma SH-SY5Y cells. Oncogene 2006; 25:240-7. (Pubitemid 43083685)
27. Voigt A, Zintl F. Effects of retinoic acid on proliferation, apoptosis, cytotoxicity, migration and invasion of neuroblastoma cells. Med Pediatr Oncol 2003; 40:205-13. (Pubitemid 36222824)
28. Kim N, Kim H, Jung I, Kim Y, Kim D, Han YM. Expression profiles of miRNAs in human embryonic stem cells during hepatocyte differentiation. Hepatol Res 2011; 41:170-83.
29. Jin P, Wang E, Ren J, Childs R, Shin JW, Khuu H, et al. Differentiation of two types of mobilized peripheral blood stem cells by microRNA and cDNA expression analysis. J Transl Med 2008; 6:39.
30. Garzon R, Pichiorri F, Palumbo T, Iuliano R, Cimmino A, Aqeilan R, et al. MicroRNA finger-prints during human megakaryocytopoiesis. Proc Natl Acad Sci USA 2006; 103:5078-83.
31. Gaur A, Jewell DA, Liang Y, Ridzon D, Moore JH, Chen C, et al. Characterization of microRNA expression levels and their biological correlates in human cancer cell lines. Cancer Res 2007; 67:2456-68. (Pubitemid 46548930)
32. Jongen-Lavrencic M, Sun SM, Dijkstra MK, Valk PJ, Lowenberg B. MicroRNA expression profiling in relation to the genetic heterogeneity of acute myeloid leukemia. Blood 2008; 111:5078-85.
33. + cells increases USF2-mediated cell growth. Mol Cancer Res 2008; 6:1830-40.
34. Calin GA, Liu CG, Sevignani C, Ferracin M, Felli N, Dumitru CD, et al. MicroRNA profiling reveals distinct signatures in B cell chronic lymphocytic leukemias. Proc Natl Acad Sci USA 2004; 101:11755-60. (Pubitemid 39095368)
35. Garzon R, Volinia S, Liu CG, Fernandez-Cymering C, Palumbo T, Pichiorri F, et al. MicroRNA signatures associated with cytogenetics and prognosis in acute myeloid leukemia. Blood 2008; 111:3183-9.
36. Dixon-McIver A, East P, Mein CA, Cazier JB, Molloy G, Chaplin T, et al. Distinctive patterns of microRNA expression associated with karyotype in acute myeloid leukaemia. PLoS One 2008; 3:2141.
37. Sasayama T, Nishihara M, Kondoh T, Hosoda K, Kohmura E. MicroRNA-10b is overexpressed in malignant glioma and associated with tumor invasive factors, uPAR and RhoC. Int J Cancer 2009; 125:1407-13.
38. Ciafre SA, Galardi S, Mangiola A, Ferracin M, Liu CG, Sabatino G, et al. Extensive modulation of a set of microRNAs in primary glioblastoma. Biochem Biophys Res Commun 2005; 334:1351-8. (Pubitemid 41074723)
39. Silber J, Lim DA, Petritsch C, Persson AI, Maunakea AK, Yu M, et al. miR-124 and miR-137 inhibit proliferation of glioblastoma multiforme cells and induce differentiation of brain tumor stem cells. BMC Med 2008; 6:14.
40. Varnholt H, Drebber U, Schulze F, Wedemeyer I, Schirmacher P, Dienes HP, et al. MicroRNA gene expression profile of hepatitis C virus-associated hepatocellular carcinoma. Hepatology 2008; 47:1223-32. (Pubitemid 351547908)
41. Li R, Qian N, Tao K, You N, Wang X, Dou K. MicroRNAs involved in neoplastic transformation of liver cancer stem cells. J Exp Clin Cancer Res 2010; 29:169.
42. Hui AB, Lenarduzzi M, Krushel T, Waldron L, Pintilie M, Shi W, et al. Comprehensive MicroRNA profiling for head and neck squamous cell carcinomas. Clin Cancer Res 2010; 16:1129-39.
43. Bloomston M, Frankel WL, Petrocca F, Volinia S, Alder H, Hagan JP, et al. MicroRNA expression patterns to differentiate pancreatic adenocarcinoma from normal pancreas and chronic pancreatitis. JAMA 2007; 297:1901-8. (Pubitemid 46707844)
44. Ma L, Reinhardt F, Pan E, Soutschek J, Bhat B, Marcusson EG, et al. Therapeutic silencing of miR-10b inhibits metastasis in a mouse mammary tumor model. Nat Biotechnol 2010; 28:341-7.
45. Gee HE, Camps C, Buffa FM, Colella S, Sheldon H, Gleadle JM, et al. MicroRNA-10b and breast cancer metastasis. Nature 2008; 455:8-9.
46. Iorio MV, Ferracin M, Liu CG, Veronese A, Spizzo R, Sabbioni S, et al. MicroRNA gene expression deregulation in human breast cancer. Cancer Res 2005; 65:7065-70. (Pubitemid 41161233)
47. Moriarty CH, Pursell B, Mercurio AM. miR-10b targets Tiam1: implications for Rac activation and carcinoma migration. J Biol Chem 2010; 285:20541-6.
48. Heinzelmann J, Henning B, Sanjmyatav J, Posorski N, Steiner T, Wunderlich H, et al. Specific miRNA signatures are associated with metastasis and poor prognosis in clear cell renal cell carcinoma. World J Urol 2011.
49. Chai G, Liu N, Ma J, Li H, Oblinger JL, Prahalad AK, et al. MicroRNA-10b regulates tumorigenesis in neurofibromatosis type 1. Cancer Sci 2010; 101:1997-2004.
50. Li G, Wu Z, Peng Y, Liu X, Lu J, Wang L, et al. MicroRNA-10b induced by Epstein-Barr virus-encoded latent membrane protein-1 promotes the metastasis of human nasopharyngeal carcinoma cells. Cancer Lett 2010; 299:29-36.
51. Tian Y, Luo A, Cai Y, Su Q, Ding F, Chen H, et al. MicroRNA-10b promotes migration and invasion through KLF4 in human esophageal cancer cell lines. J Biol Chem 2010; 285:7986-94.
52. Orom UA, Nielsen FC, Lund AH. MicroRNA-10a binds the 5′UTR of ribosomal protein mRNAs and enhances their translation. Mol Cell 2008; 30:460-71. (Pubitemid 351672378)
53. Meyuhas O. Synthesis of the translational apparatus is regulated at the translational level. Eur J Biochem 2000; 267:6321-30.
54. Hamilton TL, Stoneley M, Spriggs KA, Bushell M. TOPs and their regulation. Biochem Soc Trans 2006; 34:12-6. (Pubitemid 43235523)
55. Zhu J, Hayakawa A, Kakegawa T, Kaspar RL. Binding of the La autoantigen to the 5′ untranslated region of a chimeric human translation elongation factor 1A reporter mRNA inhibits translation in vitro. Biochim Biophys Acta 2001; 1521:19-29. (Pubitemid 33020762)
56. Pellizzoni L, Lotti F, Rutjes SA, Pierandrei-Amaldi P. Involvement of the Xenopus laevis Ro60 autoantigen in the alternative interaction of La and CNBP proteins with the 5′UTR of L4 ribosomal protein mRNA. J Mol Biol 1998; 281:593-608. (Pubitemid 28383133)
57. Crosio C, Boyl PP, Loreni F, Pierandrei-Amaldi P, Amaldi F. La protein has a positive effect on the translation of TOP mRNAs in vivo. Nucleic Acids Res 2000; 28:2927-34. (Pubitemid 30599268)
58. Tan Y, Zhang B, Wu T, Skogerbo G, Zhu X, Guo X, et al. Transcriptional inhibiton of Hoxd4 expression by miRNA-10a in human breast cancer cells. BMC Mol Biol 2009; 10:12.
59. Kim DH, Villeneuve LM, Morris KV, Rossi JJ. Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cells. Nat Struct Mol Biol 2006; 13:793-7. (Pubitemid 44338773)
60. Griffiths-Jones S. The microRNA Registry. Nucleic Acids Res 2004; 32:109-11.