메뉴 건너뛰기




Volumn 13, Issue 6, 2013, Pages 1047-1057

Restricted variation in plant barcoding markers limits identification in closely related bryophyte species

Author keywords

Arctic; Boreal; Bryophyta; DNA barcoding; ITS2; Mosses; rbcL

Indexed keywords

BARTRAMIA (MOSS); BLEPHAROSTOMA; BRYOPHYTA; BRYOPHYTES; DISTICHIUM; EMBRYOPHYTA; FISSIDENS; MAGNOLIOPHYTA; MEESIA; SYNTRICHIA;

EID: 84885481324     PISSN: 1755098X     EISSN: 17550998     Source Type: Journal    
DOI: 10.1111/1755-0998.12074     Document Type: Article
Times cited : (37)

References (57)
  • 2
    • 0036099077 scopus 로고    scopus 로고
    • Effects of light and nitrogen on morphological plasticity of the moss Calliergonella cuspidata
    • Bergamini A, Peintinger M (2002) Effects of light and nitrogen on morphological plasticity of the moss Calliergonella cuspidata. Oikos, 96, 255-363.
    • (2002) Oikos , vol.96 , pp. 255-363
    • Bergamini, A.1    Peintinger, M.2
  • 3
    • 17144379728 scopus 로고    scopus 로고
    • Phenotypic plasticity in Philonotis fontana (Bryopsida: Bartramiaceae)
    • Buryová B, Shaw AJ (2005) Phenotypic plasticity in Philonotis fontana (Bryopsida: Bartramiaceae). Journal of Bryology, 27, 13-22.
    • (2005) Journal of Bryology , vol.27 , pp. 13-22
    • Buryová, B.1    Shaw, A.J.2
  • 6
    • 77649108109 scopus 로고    scopus 로고
    • Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species
    • Chen SL, Yao H, Han JP et al. (2010) Validation of the ITS2 region as a novel DNA barcode for identifying medicinal plant species. PLoS ONE, 5, e8613.
    • (2010) PLoS ONE , vol.5
    • Chen, S.L.1    Yao, H.2    Han, J.P.3
  • 9
    • 84865345059 scopus 로고    scopus 로고
    • Liverworts collected during the Norwegian east Greenland expeditions 1929-1933
    • Damsholt K (2010) Liverworts collected during the Norwegian east Greenland expeditions 1929-1933. Lindbergia, 33, 92-113.
    • (2010) Lindbergia , vol.33 , pp. 92-113
    • Damsholt, K.1
  • 10
    • 0035059619 scopus 로고    scopus 로고
    • Factors affecting mitochondrial DNA quality from museum preserved Drosophila simulans
    • Dean MD, Ballard JWO (2001) Factors affecting mitochondrial DNA quality from museum preserved Drosophila simulans. Entomologia Experimentalis et Applicata, 98, 279-283.
    • (2001) Entomologia Experimentalis et Applicata , vol.98 , pp. 279-283
    • Dean, M.D.1    Ballard, J.W.O.2
  • 11
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research, 32, 1792-1797.
    • (2004) Nucleic Acids Research , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 12
    • 34248161638 scopus 로고    scopus 로고
    • A comprehensive DNA sequence library is essential for identification with DNA barcodes
    • Ekrem T, Willassen E, Stur E (2007) A comprehensive DNA sequence library is essential for identification with DNA barcodes. Molecular Phylogenetics and Evolution, 43, 530-542.
    • (2007) Molecular Phylogenetics and Evolution , vol.43 , pp. 530-542
    • Ekrem, T.1    Willassen, E.2    Stur, E.3
  • 13
    • 78149468555 scopus 로고    scopus 로고
    • Females do count: Documenting Chironomidae (Diptera) species diversity using DNA barcoding
    • Ekrem T, Stur E, Hebert PDN (2010) Females do count: Documenting Chironomidae (Diptera) species diversity using DNA barcoding. Organisms Diversity & Evolution, 10, 397-408.
    • (2010) Organisms Diversity & Evolution , vol.10 , pp. 397-408
    • Ekrem, T.1    Stur, E.2    Hebert, P.D.N.3
  • 14
    • 84859621660 scopus 로고    scopus 로고
    • New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems
    • Epp LS, Boessenkool1 S, Bellemain EP et al. (2012) New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems. Molecular Ecology, 21, 1821-1833.
    • (2012) Molecular Ecology , vol.21 , pp. 1821-1833
    • Epp, L.S.1    Boessenkool1, S.2    Bellemain, E.P.3
  • 16
    • 50949125486 scopus 로고    scopus 로고
    • Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well
    • Fazekas AJ, Burgess KS, Kesanakurti PR et al. (2008) Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. PLoS ONE, 3, e2802.
    • (2008) PLoS ONE , vol.3
    • Fazekas, A.J.1    Burgess, K.S.2    Kesanakurti, P.R.3
  • 17
    • 10344248881 scopus 로고    scopus 로고
    • A taxonomic revision of extra-Neotropical Bartramia section Vaginella C. Mull
    • Fransen S (2004) A taxonomic revision of extra-Neotropical Bartramia section Vaginella C. Mull. Lindbergia, 29, 73-107.
    • (2004) Lindbergia , vol.29 , pp. 73-107
    • Fransen, S.1
  • 18
    • 0842322955 scopus 로고    scopus 로고
    • Species-level paraphyly and polyphyly: Frequency, causes, and consequences, with insights from animal mitochondrial DNA
    • Funk DJ, Omland KE (2003) Species-level paraphyly and polyphyly: Frequency, causes, and consequences, with insights from animal mitochondrial DNA. Annual Review of Ecology, Evolution, and Systematics, 34, 397-423.
    • (2003) Annual Review of Ecology, Evolution, and Systematics , vol.34 , pp. 397-423
    • Funk, D.J.1    Omland, K.E.2
  • 24
    • 13944262614 scopus 로고    scopus 로고
    • Changes in life-history traits in an expanding moss species: phenotypic plasticity or genetic differentiation? A reciprocal transplantation experiment with Pogonatum dentatum
    • Hassel K, Pedersen B, Söderström L (2005) Changes in life-history traits in an expanding moss species: phenotypic plasticity or genetic differentiation? A reciprocal transplantation experiment with Pogonatum dentatum. Ecography, 28, 71-80.
    • (2005) Ecography , vol.28 , pp. 71-80
    • Hassel, K.1    Pedersen, B.2    Söderström, L.3
  • 25
    • 34249105895 scopus 로고    scopus 로고
    • An annotated checklist of the mosses of Europe and Macaronesia
    • Hill MO, Bell N, Bruggeman-Nannenga MA et al. (2006) An annotated checklist of the mosses of Europe and Macaronesia. Journal of Bryology, 28, 198-267.
    • (2006) Journal of Bryology , vol.28 , pp. 198-267
    • Hill, M.O.1    Bell, N.2    Bruggeman-Nannenga, M.A.3
  • 26
    • 60349111930 scopus 로고    scopus 로고
    • Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants
    • Hollingsworth ML, Clark AA, Forrest LL et al. (2009) Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants. Molecular Ecology Resources, 9, 439-457.
    • (2009) Molecular Ecology Resources , vol.9 , pp. 439-457
    • Hollingsworth, M.L.1    Clark, A.A.2    Forrest, L.L.3
  • 29
    • 77953914611 scopus 로고    scopus 로고
    • DNA barcoding of Scandinavian birds reveals divergent lineages in trans-Atlantic species
    • Johnsen A, Rindal E, Ericson PGP et al. (2010) DNA barcoding of Scandinavian birds reveals divergent lineages in trans-Atlantic species. Journal of Ornithology, 151, 565-578.
    • (2010) Journal of Ornithology , vol.151 , pp. 565-578
    • Johnsen, A.1    Rindal, E.2    Ericson, P.G.P.3
  • 30
    • 77951631088 scopus 로고    scopus 로고
    • A two-locus global DNA barcode for land plants: The coding rbcL gene complements the non-coding trnH-psbA spacer region
    • Kress WJ, Erickson DL (2007) A two-locus global DNA barcode for land plants: The coding rbcL gene complements the non-coding trnH-psbA spacer region. PLoS ONE, 2, e508.
    • (2007) PLoS ONE , vol.2
    • Kress, W.J.1    Erickson, D.L.2
  • 33
    • 79951618988 scopus 로고    scopus 로고
    • A case study of DNA barcoding in Chinese Grimmiaceae and a moss recorded in China for the first time
    • Liu Y, Cao T, Ge XJ (2011) A case study of DNA barcoding in Chinese Grimmiaceae and a moss recorded in China for the first time. Taxon, 60, 185-193.
    • (2011) Taxon , vol.60 , pp. 185-193
    • Liu, Y.1    Cao, T.2    Ge, X.J.3
  • 34
    • 0009607247 scopus 로고
    • Effects of certain cultivation treatments on the morphology of some British species of Drepanocladus
    • Lodge E (1959) Effects of certain cultivation treatments on the morphology of some British species of Drepanocladus. Journal of the Linnean Society Botany, 56, 218-224.
    • (1959) Journal of the Linnean Society Botany , vol.56 , pp. 218-224
    • Lodge, E.1
  • 35
    • 33845313302 scopus 로고    scopus 로고
    • Morphological, ecological and genetic evidence for distinguishing Anastrophyllum joergensenii Schiffn. and A. alpinum Steph. (Jungermanniopsida: Lophoziaceae)
    • Long DG, Paton JA, Squirrell J, Woodhead M, Hollingsworth PM (2006) Morphological, ecological and genetic evidence for distinguishing Anastrophyllum joergensenii Schiffn. and A. alpinum Steph. (Jungermanniopsida: Lophoziaceae). Journal of Bryology, 28, 108-117.
    • (2006) Journal of Bryology , vol.28 , pp. 108-117
    • Long, D.G.1    Paton, J.A.2    Squirrell, J.3    Woodhead, M.4    Hollingsworth, P.M.5
  • 36
    • 0002673997 scopus 로고
    • Biosystematic studies of the Tortula ruralis complex. I. Variation of taxonomic characters in culture
    • Mishler BD (1985) Biosystematic studies of the Tortula ruralis complex. I. Variation of taxonomic characters in culture. Journal of the Hattori Botanical Laboratory, 58, 225-253.
    • (1985) Journal of the Hattori Botanical Laboratory , vol.58 , pp. 225-253
    • Mishler, B.D.1
  • 37
    • 58149232060 scopus 로고    scopus 로고
    • 33. Syntrichia Bridel, J. Bot. (Schrader) 1801(1): 299. 1801
    • In: (eds Crosby MR, Delgadillo CM, Harris P, Hill M, Kiger RW, McIntosh TT, Murray BM, Reese WD, Stark LR, Thiers B, Vitt DH, Yatskievych K, Zander RH, Zarucchi JL). Oxford University Press, New York.
    • Mishler BD (2007) 33. Syntrichia Bridel, J. Bot. (Schrader) 1801(1): 299. 1801. In: Flora of North America. Volume 27. Bryophytes: Mosses, part 1 (eds Crosby MR, Delgadillo CM, Harris P, Hill M, Kiger RW, McIntosh TT, Murray BM, Reese WD, Stark LR, Thiers B, Vitt DH, Yatskievych K, Zander RH, Zarucchi JL), pp. 618-627. Oxford University Press, New York.
    • (2007) Flora of North America. Volume 27. Bryophytes: Mosses, part 1 , pp. 618-627
    • Mishler, B.D.1
  • 40
    • 79953132994 scopus 로고    scopus 로고
    • Metabarcoding a new way to analyze biodiversity
    • Pompanon F, Coissac E, Taberlet P (2011) Metabarcoding a new way to analyze biodiversity. Biofutur, 30, 30-32.
    • (2011) Biofutur , vol.30 , pp. 30-32
    • Pompanon, F.1    Coissac, E.2    Taberlet, P.3
  • 41
    • 84866521485 scopus 로고    scopus 로고
    • 21. Fissidentaceae Schimper
    • In: (eds Crosby MR, Delgadillo CM, Harris P, Hill M, Kiger RW, McIntosh TT, Murray BM, Reese WD, Stark LR, Thiers B, Vitt DH, Yatskievych K, Zander RH, Zarucchi JL). Oxford University Press, New York.
    • Pursell RA (2007) 21. Fissidentaceae Schimper. In: Flora of North America. Volume 27. Bryophytes: Mosses, part 1 (eds Crosby MR, Delgadillo CM, Harris P, Hill M, Kiger RW, McIntosh TT, Murray BM, Reese WD, Stark LR, Thiers B, Vitt DH, Yatskievych K, Zander RH, Zarucchi JL), pp. 331-357. Oxford University Press, New York.
    • (2007) Flora of North America. Volume 27. Bryophytes: Mosses, part 1 , pp. 331-357
    • Pursell, R.A.1
  • 42
    • 0031406079 scopus 로고    scopus 로고
    • Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae)
    • Sang T, Crawford DJ, Stuessy TF (1997) Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae). American Journal of Botany, 84, 1120-1136.
    • (1997) American Journal of Botany , vol.84 , pp. 1120-1136
    • Sang, T.1    Crawford, D.J.2    Stuessy, T.F.3
  • 44
    • 0036652480 scopus 로고    scopus 로고
    • Distribution of hepaticae and Anthocerotae in Europe and macaronesia
    • Söderström L, Urmi E, Vána J (2002) Distribution of hepaticae and Anthocerotae in Europe and macaronesia. Lindbergia, 27, 3-47.
    • (2002) Lindbergia , vol.27 , pp. 3-47
    • Söderström, L.1    Urmi, E.2    Vána, J.3
  • 45
    • 78650499408 scopus 로고    scopus 로고
    • Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate
    • Sønstebø JH, Gielly L, Brysting AK et al. (2010) Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate. Molecular Ecology Resources, 10, 1009-1018.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 1009-1018
    • Sønstebø, J.H.1    Gielly, L.2    Brysting, A.K.3
  • 46
    • 79751518818 scopus 로고    scopus 로고
    • 20,000 species and five key markers: The status of molecular bryophyte phylogenetics
    • Stech M, Quandt D (2010) 20, 000 species and five key markers: The status of molecular bryophyte phylogenetics. Phytotaxa, 9, 196-228.
    • (2010) Phytotaxa , vol.9 , pp. 196-228
    • Stech, M.1    Quandt, D.2
  • 47
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    • Tamura K, Peterson D, Peterson N et al. (2011) MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution, 28, 2731-2739.
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3
  • 48
    • 0345393289 scopus 로고    scopus 로고
    • Paraphyly of Tarasa (Malvaceae) and diverse origins of the polyploid species
    • Tate JA, Simpson BB (2003) Paraphyly of Tarasa (Malvaceae) and diverse origins of the polyploid species. Systematic Botany, 28, 723-737.
    • (2003) Systematic Botany , vol.28 , pp. 723-737
    • Tate, J.A.1    Simpson, B.B.2
  • 50
    • 78650450988 scopus 로고    scopus 로고
    • DNA barcoding in plants: taxonomy in a new perspective
    • Vijayan K, Tsou CH (2010) DNA barcoding in plants: taxonomy in a new perspective. Current Science, 99, 1530-1541.
    • (2010) Current Science , vol.99 , pp. 1530-1541
    • Vijayan, K.1    Tsou, C.H.2
  • 52
    • 0000432452 scopus 로고
    • Amplifications and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • In: (eds Innis MA, Gelfand DH, Sninsky JJ, White TJ). Academic Press, New York.
    • White TJ, Bruns TD, Lee SB, Taylor JW (1990) Amplifications and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: A Guide to Methods and Applications (eds Innis MA, Gelfand DH, Sninsky JJ, White TJ), pp. 315-322. Academic Press, New York.
    • (1990) PCR protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.D.2    Lee, S.B.3    Taylor, J.W.4
  • 53
    • 78049313200 scopus 로고    scopus 로고
    • Use of ITS2 region as the universal DNA barcode for plants and animals
    • Yao H, Song JY, Liu C et al. (2010) Use of ITS2 region as the universal DNA barcode for plants and animals. PLoS ONE, 5, e13102.
    • (2010) PLoS ONE , vol.5
    • Yao, H.1    Song, J.Y.2    Liu, C.3
  • 54
    • 78049382780 scopus 로고    scopus 로고
    • The genus Drosophila as a model for testing tree- and character-based methods of species identification using DNA barcoding
    • Yassin A, Markow TA, Narechania A, O'Grady PM, DeSalle R (2010) The genus Drosophila as a model for testing tree- and character-based methods of species identification using DNA barcoding. Molecular Phylogenetics and Evolution, 57, 509-517.
    • (2010) Molecular Phylogenetics and Evolution , vol.57 , pp. 509-517
    • Yassin, A.1    Markow, T.A.2    Narechania, A.3    O'Grady, P.M.4    DeSalle, R.5
  • 56
    • 84885484015 scopus 로고    scopus 로고
    • The preliminary study on DNA barcoding of mosses - a case of part of genera of Meteoriaceae
    • Zhao LJ, Jia Y, Zhou SL (2010) The preliminary study on DNA barcoding of mosses - a case of part of genera of Meteoriaceae. Acta Botanica Yunnanica, 32, 239-249.
    • (2010) Acta Botanica Yunnanica , vol.32 , pp. 239-249
    • Zhao, L.J.1    Jia, Y.2    Zhou, S.L.3
  • 57
    • 74849128562 scopus 로고    scopus 로고
    • Towards a comprehensive barcode library for arctic life - Ephemeroptera, Plecoptera, and Trichoptera of Churchill, Manitoba
    • doi:10.1186/1742-9994-6-30.
    • Zhou X, Adamowicz SJ, Jacobus LM, DeWalt RE, Hebert PDN (2009) Towards a comprehensive barcode library for arctic life - Ephemeroptera, Plecoptera, and Trichoptera of Churchill, Manitoba. Canada. Frontiers in Zoology, 6, doi:10.1186/1742-9994-6-30.
    • (2009) Canada. Frontiers in Zoology , vol.6
    • Zhou, X.1    Adamowicz, S.J.2    Jacobus, L.M.3    DeWalt, R.E.4    Hebert, P.D.N.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.