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Volumn , Issue AUG, 2013, Pages

Variability in micro RNA (miRNA) abundance, speciation and complexity amongst different human populations and potential relevance to Alzheimer's disease (AD)

Author keywords

African american; Alzheimer's disease; Caucasian american; Human biochemical individuality; Human populations; miRNA profiling; MiRNA speciation; Superior temporal lobe neocortex

Indexed keywords

AMYLOID BETA PROTEIN; APOLIPOPROTEIN E; HEMOGLOBIN; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; MESSENGER RNA; MICRORNA; MICRORNA 125B; MICRORNA 146A; MICRORNA 155; MICRORNA 34A; MICRORNA 9;

EID: 84885027485     PISSN: 16625102     EISSN: None     Source Type: Journal    
DOI: 10.3389/fncel.2013.00133     Document Type: Article
Times cited : (46)

References (37)
  • 2
    • 0037010289 scopus 로고    scopus 로고
    • Gene expression profiling of 12633 genes in Alzheimer hippocampal CA1: Transcription and neurotrophic factor downregulation and up-regulation of apoptotic and pro-inflammatory signaling
    • doi: 10.1002/jnr.10351
    • Colangelo, V., Schurr, J., Ball, M. J., Pelaez, R. P., and Lukiw, W. J. (2002). Gene expression profiling of 12633 genes in Alzheimer hippocampal CA1: transcription and neurotrophic factor downregulation and up-regulation of apoptotic and pro-inflammatory signaling. J. Neurosci. Res. 70, 462-473. doi: 10.1002/jnr.10351
    • (2002) J. Neurosci. Res. , vol.70 , pp. 462-473
    • Colangelo, V.1    Schurr, J.2    Ball, M.J.3    Pelaez, R.P.4    Lukiw, W.J.5
  • 3
    • 80055015161 scopus 로고    scopus 로고
    • Temporal dynamics and genetic control of transcription in the human prefrontal cortex
    • doi: 10.1038/nature10524
    • Colantuoni, C., Lipska, B. K., Ye, T., Hyde, T. M., Tao, R., Leek, J. T., et al. (2011). Temporal dynamics and genetic control of transcription in the human prefrontal cortex. Nature 478, 19-23. doi: 10.1038/nature10524
    • (2011) Nature , vol.478 , pp. 19-23
    • Colantuoni, C.1    Lipska, B.K.2    Ye, T.3    Hyde, T.M.4    Tao, R.5    Leek, J.T.6
  • 4
    • 67349178206 scopus 로고    scopus 로고
    • Intra-and inter-individual genetic differences in gene expression
    • doi: 10.1007/s00335-009-9181-x
    • Cowley, M. J., Cotsapas, C. J., Williams, R. B., Chan, E. K., Pulvers, J. N., Liu, M. Y., et al. (2009). Intra-and inter-individual genetic differences in gene expression. Mamm. Genome20, 281-295. doi: 10.1007/s00335-009-9181-x
    • (2009) Mamm. Genome , vol.20 , pp. 281-295
    • Cowley, M.J.1    Cotsapas, C.J.2    Williams, R.B.3    Chan, E.K.4    Pulvers, J.N.5    Liu, M.Y.6
  • 5
    • 23944507076 scopus 로고    scopus 로고
    • Isolation of high spectral quality messenger RNA (mRNA) using run-on gene transcription; application to gene expression profiling of human brain
    • doi: 10.1007/s10571-005-4035-x
    • Cui, J. G., Zhao, Y., and Lukiw, W. J. (2005). Isolation of high spectral quality messenger RNA (mRNA) using run-on gene transcription; application to gene expression profiling of human brain. Cell. Mol. Neurobiol. 25, 789-794. doi: 10.1007/s10571-005-4035-x
    • (2005) Cell. Mol. Neurobiol. , vol.25 , pp. 789-794
    • Cui, J.G.1    Zhao, Y.2    Lukiw, W.J.3
  • 6
    • 78649863208 scopus 로고    scopus 로고
    • Differential regulation of interleukin-1 receptor-associated kinase-1 (IRAK-1) and IRAK-2 by microRNA-146a and NF-kappaB in stressed human astroglial cells and in Alzheimer disease
    • doi: 10.1074/jbc.M110.178848
    • Cui, J. G., Li, Y. Y., Zhao, Y., Bhattacharjee, S., and Lukiw, W. J. (2010). Differential regulation of interleukin-1 receptor-associated kinase-1 (IRAK-1) and IRAK-2 by microRNA-146a and NF-kappaB in stressed human astroglial cells and in Alzheimer disease. J. Biol. Chem. 285, 38951-38960. doi: 10.1074/jbc.M110.178848
    • (2010) J. Biol. Chem. , vol.285 , pp. 38951-38960
    • Cui, J.G.1    Li, Y.Y.2    Zhao, Y.3    Bhattacharjee, S.4    Lukiw, W.J.5
  • 7
    • 79958109878 scopus 로고    scopus 로고
    • Tumour necrosis factor-α (TNF-α) and miRNA expression in frontal and temporal neocortex in Alzheimer's disease and the effect of TNF-α on miRNA expression in vitro
    • Culpan, D., Kehoe, P. G., and Love, S. (2011). Tumour necrosis factor-α (TNF-α) and miRNA expression in frontal and temporal neocortex in Alzheimer's disease and the effect of TNF-α on miRNA expression in vitro. Int. J. Mol. Epidemiol. Genet. 2, 156-162.
    • (2011) Int. J. Mol. Epidemiol. Genet. , vol.2 , pp. 156-162
    • Culpan, D.1    Kehoe, P.G.2    Love, S.3
  • 8
    • 0031901534 scopus 로고    scopus 로고
    • Dementia in older minority populations; issues of prevalence, diagnosis, and treatment
    • doi: 10.1097/00019442-199821001-00003
    • Espino, D. V., and Lewis, R. (1998). Dementia in older minority populations; issues of prevalence, diagnosis, and treatment. Am. J. Geriatr. Psychiatry 6, S19-S25. doi: 10.1097/00019442-199821001-00003
    • (1998) Am. J. Geriatr. Psychiatry , vol.6
    • Espino, D.V.1    Lewis, R.2
  • 9
    • 0035028138 scopus 로고    scopus 로고
    • Dementia and race: Are there differences between African Americans and Caucasians
    • doi: 10.1046/j.1532-5415.2001.49096.x
    • Froehlich, T. E., Bogardus, S. T. Jr., and Inouye, S. K. (2001). Dementia and race: are there differences between African Americans and Caucasians.J. Am. Geriatr. Soc. 49, 477-484. doi: 10.1046/j.1532-5415.2001.49096.x
    • (2001) J. Am. Geriatr. Soc. , vol.49 , pp. 477-484
    • Froehlich, T.E.1    Bogardus Jr., S.T.2    Inouye, S.K.3
  • 10
    • 81955162957 scopus 로고    scopus 로고
    • Gene expression levels assessed by CA1 pyramidal neuron and regional hippocampal dissections in Alzheimer's disease
    • doi: 10.1016/j.nbd.2011.07.013
    • Ginsberg, S. D., Alldred, M. J., and Che, S. (2012). Gene expression levels assessed by CA1 pyramidal neuron and regional hippocampal dissections in Alzheimer's disease. Neurobiol. Dis. 45, 99-107. doi: 10.1016/j.nbd.2011.07.013
    • (2012) Neurobiol. Dis. , vol.45 , pp. 99-107
    • Ginsberg, S.D.1    Alldred, M.J.2    Che, S.3
  • 11
    • 84866481943 scopus 로고    scopus 로고
    • MicroRNA expression profile of the hippocampus in a rat model of temporal lobe epilepsy and miR-34a-targeted neuroprotection against hippocampal neuron cell apoptosis post-status epilepticus
    • doi: 10.1186/1471-2202-13-115
    • Hu, K., Xie, Y. Y., Zhang, C., Ouyang, D. S., Long, H. Y., Sun, D. N., et al. (2012). MicroRNA expression profile of the hippocampus in a rat model of temporal lobe epilepsy and miR-34a-targeted neuroprotection against hippocampal neuron cell apoptosis post-status epilepticus. BMC Neurosci. 13:115. doi: 10.1186/1471-2202-13-115
    • (2012) BMC Neurosci. , vol.13 , pp. 115
    • Hu, K.1    Xie, Y.Y.2    Zhang, C.3    Ouyang, D.S.4    Long, H.Y.5    Sun, D.N.6
  • 12
    • 84871819437 scopus 로고    scopus 로고
    • Genetic variants contribute to gene expression variability in humans
    • doi: 10.1534/ genetics.112.146779
    • Hulse, A. M., and Cai, J. J. (2013). Genetic variants contribute to gene expression variability in humans. Genetics 193, 95-108. doi: 10.1534/ genetics.112.146779
    • (2013) Genetics , vol.193 , pp. 95-108
    • Hulse, A.M.1    Cai, J.J.2
  • 13
    • 84866369867 scopus 로고    scopus 로고
    • MiRNA-146a: A key regulator of astrocyte-mediated inflammatory response
    • doi: 10.1371/ journal.pone.0044789
    • Iyer, A., Zurolo, E., Prabowo, A., Fluiter, K., Spliet, W. G., van Rijen, P. C., et al. (2012). MiRNA-146a: a key regulator of astrocyte-mediated inflammatory response. PLoS ONE 7:e44789. doi: 10.1371/ journal.pone.0044789
    • (2012) PLoS ONE , vol.7
    • Iyer, A.1    Zurolo, E.2    Prabowo, A.3    Fluiter, K.4    Spliet, W.G.5    van Rijen, P.C.6
  • 14
    • 84876237691 scopus 로고    scopus 로고
    • Exploring host-microbiome interactions in animal models and humans
    • doi: 10.1101/gad.212522.112
    • Kostic, A. D., Howitt, M. R., and Garrett, W. S. (2013). Exploring host-microbiome interactions in animal models and humans. Genes Dev. 27, 701-718. doi: 10.1101/gad.212522.112
    • (2013) Genes Dev. , vol.27 , pp. 701-718
    • Kostic, A.D.1    Howitt, M.R.2    Garrett, W.S.3
  • 15
    • 78049444975 scopus 로고    scopus 로고
    • Gene expression variability within and between human populations and implications toward disease susceptibility
    • doi:10.1371/journal.pcbi.1000910
    • Li, J., Liu, Y., Kim, T., Min, R., and Zhang, Z. (2010). Gene expression variability within and between human populations and implications toward disease susceptibility. PLoS Comput. Biol. 6:e1000910. doi:10.1371/journal.pcbi.1000910
    • (2010) PLoS Comput. Biol. , vol.6
    • Li, J.1    Liu, Y.2    Kim, T.3    Min, R.4    Zhang, Z.5
  • 16
    • 33847203593 scopus 로고    scopus 로고
    • Micro-RNA speciation in fetal, adult and Alzheimer's disease hippocampus
    • doi: 10.1097/WNR. 0b013e3280148e8b
    • Lukiw, W. J. (2007). Micro-RNA speciation in fetal, adult and Alzheimer's disease hippocampus. Neuroreport 18, 297-300. doi: 10.1097/WNR. 0b013e3280148e8b
    • (2007) Neuroreport , vol.18 , pp. 297-300
    • Lukiw, W.J.1
  • 17
    • 34548177451 scopus 로고    scopus 로고
    • Induction of specific micro RNA (miRNA) species by ROSgenerating metal sulfates in primary human brain cells
    • doi: 10.1016/j.jinorgbio.2007.06.004
    • Lukiw, W. J., and Pogue, A. I. (2007). Induction of specific micro RNA (miRNA) species by ROSgenerating metal sulfates in primary human brain cells. J. Inorg. Biochem. 101, 1265-1269. doi: 10.1016/j.jinorgbio.2007.06.004
    • (2007) J. Inorg. Biochem. , vol.101 , pp. 1265-1269
    • Lukiw, W.J.1    Pogue, A.I.2
  • 18
    • 81255152428 scopus 로고    scopus 로고
    • Up-regulation of micro RNA-146a (miRNA-146a), a marker for inflammatory neurodegeneration, in sporadic Creutzfeldt-Jakob disease (sCJD) and Gerstmann-Straussler Scheinker (GSS) syndrome
    • doi: 10.1080/15287394.2011. 618973
    • Lukiw, W. J., Dua, P., Pogue, A. I., Eicken, C., and Hill, J. M. (2011). Up-regulation of micro RNA-146a (miRNA-146a), a marker for inflammatory neurodegeneration, in sporadic Creutzfeldt-Jakob disease (sCJD) and Gerstmann-Straussler Scheinker (GSS) syndrome. J. Toxicol. Environ. Health 74, 1460-1468. doi: 10.1080/15287394.2011. 618973
    • (2011) J. Toxicol. Environ. Health , vol.74 , pp. 1460-1468
    • Lukiw, W.J.1    Dua, P.2    Pogue, A.I.3    Eicken, C.4    Hill, J.M.5
  • 19
    • 84860364449 scopus 로고    scopus 로고
    • NF-kB-regulated micro RNAs (miRNAs) in primary human brain cells
    • doi: 10.1016/j.expneurol.2011.11.022
    • Lukiw, W. J. (2012a). NF-kB-regulated micro RNAs (miRNAs) in primary human brain cells. Exp. Neurol. 235, 484-490. doi: 10.1016/j.expneurol.2011.11.022
    • (2012) Exp. Neurol. , vol.235 , pp. 484-490
    • Lukiw, W.J.1
  • 20
    • 84871697996 scopus 로고    scopus 로고
    • Evolution and complexity of micro RNA in the human brain
    • doi: 10.3389/fgene.2012.00166
    • Lukiw, W. J. (2012b). Evolution and complexity of micro RNA in the human brain. Front. Genet. 3:166. doi: 10.3389/fgene.2012.00166
    • (2012) Front. Genet. , vol.3 , pp. 166
    • Lukiw, W.J.1
  • 21
    • 84883540611 scopus 로고    scopus 로고
    • Antagonism of NF-κB-upregulated micro RNAs (miRNAs) in sporadic Alzheimer's disease (AD); anti-NF-κB versus anti-miRNA strategies
    • doi: 10.3389/fgene.2013.00077
    • Lukiw, W. J. (2013). Antagonism of NF-κB-upregulated micro RNAs (miRNAs) in sporadic Alzheimer's disease (AD); anti-NF-κB versus anti-miRNA strategies. Front. Genet. 4:77. doi: 10.3389/fgene.2013.00077
    • (2013) Front. Genet. , vol.4 , pp. 77
    • Lukiw, W.J.1
  • 22
    • 0024442082 scopus 로고
    • New evidence for an active role of aluminum in Alzheimer's disease
    • McLachlan, D. R., Lukiw, W. J., and Kruck, T. P. (1989). New evidence for an active role of aluminum in Alzheimer's disease. Can. J. Neurol. Sci. 16, 490-497.
    • (1989) Can. J. Neurol. Sci. , vol.16 , pp. 490-497
    • McLachlan, D.R.1    Lukiw, W.J.2    Kruck, T.P.3
  • 23
    • 84875954971 scopus 로고    scopus 로고
    • Genome-wide association studies, Alzheimer disease, and understudied populations
    • doi: 10.1001/jama.2013.3507
    • Nussbaum, R. L. (2013). Genome-wide association studies, Alzheimer disease, and understudied populations. JAMA 309, 1527-1528. doi: 10.1001/jama.2013.3507
    • (2013) JAMA , vol.309 , pp. 1527-1528
    • Nussbaum, R.L.1
  • 24
    • 84872450218 scopus 로고    scopus 로고
    • Human genetic individuality
    • doi: 10.1146/annurev-genom-090711-163825
    • Olson, M. V. (2012). Human genetic individuality. Annu. Rev. Genomics Hum. Genet. 13, 1-27. doi: 10.1146/annurev-genom-090711-163825
    • (2012) Annu. Rev. Genomics Hum. Genet. , vol.13 , pp. 1-27
    • Olson, M.V.1
  • 26
    • 84858648349 scopus 로고    scopus 로고
    • A network diffusion model of disease progression in dementia
    • doi: 10.1016/j. neuron.2011.12.040
    • Raj, A., Kuceyeski, A., and Weiner, M. (2012). A network diffusion model of disease progression in dementia. Neuron 73, 1204-1215. doi: 10.1016/j. neuron.2011.12.040
    • (2012) Neuron , vol.73 , pp. 1204-1215
    • Raj, A.1    Kuceyeski, A.2    Weiner, M.3
  • 27
    • 77249114260 scopus 로고    scopus 로고
    • Variability in gene expression underlies incomplete penetrance
    • doi: 10.1038/nature08781
    • Raj, A., Rifkin, S. A., Andersen, E., and van Oudenaarden, A. (2010). Variability in gene expression underlies incomplete penetrance. Nature 463, 913-918. doi: 10.1038/nature08781
    • (2010) Nature , vol.463 , pp. 913-918
    • Raj, A.1    Rifkin, S.A.2    Andersen, E.3    van Oudenaarden, A.4
  • 28
    • 84875922261 scopus 로고    scopus 로고
    • Variants in the ATP-binding cassette transporter (ABCA7), apolipoprotein E {small element of}4, and the risk of late-onset Alzheimer disease in African Americans
    • doi: 10.1001/jama.2013.2973
    • Reitz, C., Jun, G., Naj, A., Rajbhandary, R., Vardarajan, B. N., Wang, L. S., et al. (2013). Variants in the ATP-binding cassette transporter (ABCA7), apolipoprotein E {small element of}4, and the risk of late-onset Alzheimer disease in African Americans. JAMA 309, 1483-1492. doi: 10.1001/jama.2013.2973
    • (2013) JAMA , vol.309 , pp. 1483-1492
    • Reitz, C.1    Jun, G.2    Naj, A.3    Rajbhandary, R.4    Vardarajan, B.N.5    Wang, L.S.6
  • 29
    • 84857154347 scopus 로고    scopus 로고
    • MicroRNA 146a (miR-146a) is over-expressed during prion disease and modulates the innate immune response and the microglial activation state
    • doi:10.1371/journal.pone.0030832
    • Saba, R., Gushue, S., Huzarewich, R. L., Manguiat, K., Medina, S., Robertson, C., et al. (2012). MicroRNA 146a (miR-146a) is over-expressed during prion disease and modulates the innate immune response and the microglial activation state. PLoS ONE. 7:e30832. doi:10.1371/journal.pone.0030832
    • (2012) PLoS ONE. , vol.7
    • Saba, R.1    Gushue, S.2    Huzarewich, R.L.3    Manguiat, K.4    Medina, S.5    Robertson, C.6
  • 30
    • 65749093295 scopus 로고    scopus 로고
    • Micro-RNA (miRNA) abundance and stability in human primary brain cells and in human brain tissues
    • doi: 10.1016/j.neulet.2009.04.052
    • Sethi, P., and Lukiw, W. J. (2009). Micro-RNA (miRNA) abundance and stability in human primary brain cells and in human brain tissues. Neurosci. Lett. 459, 100-104. doi: 10.1016/j.neulet.2009.04.052
    • (2009) Neurosci. Lett. , vol.459 , pp. 100-104
    • Sethi, P.1    Lukiw, W.J.2
  • 32
    • 0032507032 scopus 로고    scopus 로고
    • The APOE-epsilon4 allele and the risk of Alzheimer disease among African Americans, whites, and Hispanics
    • doi: 10.1001/jama.279. 10.751
    • Tang, M. X., Stern, Y., Marder, K., Bell, K., Gurland, B., Lantigua, R., et al. (1998). The APOE-epsilon4 allele and the risk of Alzheimer disease among African Americans, whites, and Hispanics. JAMA 279, 751-755. doi: 10.1001/jama.279. 10.751
    • (1998) JAMA , vol.279 , pp. 751-755
    • Tang, M.X.1    Stern, Y.2    Marder, K.3    Bell, K.4    Gurland, B.5    Lantigua, R.6
  • 33
    • 79251508690 scopus 로고    scopus 로고
    • Interethnic differences in dementia epidemiology: Global and Asia-Pacific perspectives
    • doi: 10.1159/000 321675
    • Venketasubramanian, N., Sahadevan, S., Kua, E. H., Chen, C. P., and Ng, T. P. (2010). Interethnic differences in dementia epidemiology: global and Asia-Pacific perspectives. Dement. Geriatr. Cogn. Disord. 30, 492-498. doi: 10.1159/000 321675
    • (2010) Dement. Geriatr. Cogn. Disord. , vol.30 , pp. 492-498
    • Venketasubramanian, N.1    Sahadevan, S.2    Kua, E.H.3    Chen, C.P.4    Ng, T.P.5
  • 34
    • 70349558133 scopus 로고    scopus 로고
    • miR-34a, a microRNA up-regulated in a double transgenic mouse model of Alzheimer's disease, inhibits bcl2 translation
    • doi: 10.1016/j.brainresbull.2009.08.006
    • Wang, X., Liu, P., Zhu, H., Xu, Y., Ma, C., Dai, X., et al. (2009). miR-34a, a microRNA up-regulated in a double transgenic mouse model of Alzheimer's disease, inhibits bcl2 translation. Brain Res. Bull. 80, 268-273. doi: 10.1016/j.brainresbull.2009.08.006
    • (2009) Brain Res. Bull. , vol.80 , pp. 268-273
    • Wang, X.1    Liu, P.2    Zhu, H.3    Xu, Y.4    Ma, C.5    Dai, X.6
  • 35
    • 38849093314 scopus 로고    scopus 로고
    • The influence of genetic variation on gene expression
    • doi: 10.1101/gr.6981507
    • Williams, R. B., Chan, E. K., Cowley, M. J., and Little, P. F. (2007). The influence of genetic variation on gene expression. Genome Res. 17, 1707-1716. doi: 10.1101/gr.6981507
    • (2007) Genome Res. , vol.17 , pp. 1707-1716
    • Williams, R.B.1    Chan, E.K.2    Cowley, M.J.3    Little, P.F.4
  • 36
    • 84875831763 scopus 로고    scopus 로고
    • Regulation of TREM2 expression by an NF-êBsensitive miRNA-34a
    • doi: 10.1097/WNR.0b013e32835fb6b0
    • Zhao, Y., Bhattacharjee, S., Jones, B. M., Dua, P., Alexandrov, P. N., Hill, J. M., et al. (2013). Regulation of TREM2 expression by an NF-êBsensitive miRNA-34a. Neuroreport 24, 318-323. doi: 10.1097/WNR.0b013e32835fb6b0
    • (2013) Neuroreport , vol.24 , pp. 318-323
    • Zhao, Y.1    Bhattacharjee, S.2    Jones, B.M.3    Dua, P.4    Alexandrov, P.N.5    Hill, J.M.6


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