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Volumn 10, Issue 8, 2013, Pages 1324-1332

Indigenous and acquired modifications in the aminoglycoside binding sites of Pseudomonas aeruginosa rRNAs

Author keywords

Aminoglycosides; Methyltransferases; Pseudomonas; RmtD; RRNA modifications

Indexed keywords

AMIKACIN; AMINOGLYCOSIDE; APRAMYCIN; BACTERIAL RNA; GENTAMICIN; HABEKACIN; KANAMYCIN; METHYLTRANSFERASE; NEOMYCIN; PRIMER RNA; RIBOSOME RNA; RNA 16S; RNA DIRECTED DNA POLYMERASE; TOBRAMYCIN;

EID: 84883062290     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.4161/rna.25984     Document Type: Article
Times cited : (9)

References (59)
  • 1
    • 0030021470 scopus 로고    scopus 로고
    • Role of mutant CFTR in hypersusceptibility of cystic fibrosis patients to lung infections
    • PMID:8539601
    • Pier GB, Grout M, Zaidi TS, Olsen JC, Johnson LG, Yankaskas JR, Goldberg JB. Role of mutant CFTR in hypersusceptibility of cystic fibrosis patients to lung infections. Science 1996; 271:64-7; PMID:8539601; http://dx.doi.org/10. 1126/science.271.5245.64
    • (1996) Science , vol.271 , pp. 64-67
    • Pier, G.B.1    Grout, M.2    Zaidi, T.S.3    Olsen, J.C.4    Johnson, L.G.5    Yankaskas, J.R.6    Goldberg, J.B.7
  • 2
    • 84869219279 scopus 로고    scopus 로고
    • Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: An evolutionary perspective
    • PMID:23147702
    • Folkesson A, Jelsbak L, Yang L, Johansen HK, Ciofu O, Hoiby N, Molin S. Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective. Nat Rev Microbiol 2012; 10:841-51; PMID:23147702; http://dx.doi.org/10.1038/nrmicro2907
    • (2012) Nat Rev Microbiol , vol.10 , pp. 841-851
    • Folkesson, A.1    Jelsbak, L.2    Yang, L.3    Johansen, H.K.4    Ciofu, O.5    Hoiby, N.6    Molin, S.7
  • 4
    • 0036304163 scopus 로고    scopus 로고
    • Pharmacokinetics and bioavailability of aerosolized tobramycin in cystic fibrosis
    • PMID:12114362
    • Geller DE, Pitlick WH, Nardella PA, Tracewell WG, Ramsey BW. Pharmacokinetics and bioavailability of aerosolized tobramycin in cystic fibrosis. Chest 2002; 122:219-26; PMID:12114362; http://dx.doi.org/10.1378/ chest.122.1.219
    • (2002) Chest , vol.122 , pp. 219-226
    • Geller, D.E.1    Pitlick, W.H.2    Nardella, P.A.3    Tracewell, W.G.4    Ramsey, B.W.5
  • 5
  • 6
    • 18844413446 scopus 로고    scopus 로고
    • Structural insights into translational fidelity
    • PMID:15952884
    • Ogle JM, Ramakrishnan V. Structural insights into translational fidelity. Annu Rev Biochem 2005; 74:129-77; PMID:15952884; http://dx.doi.org/10.1146/ annurev.biochem.74.061903.155440
    • (2005) Annu Rev Biochem , vol.74 , pp. 129-177
    • Ogle, J.M.1    Ramakrishnan, V.2
  • 7
    • 0014429801 scopus 로고
    • Misreading of ribonucleic acid code words induced by aminoglycoside antibiotics. The effect of drug concentration
    • PMID:5656371
    • Davies J, Davis BD. Misreading of ribonucleic acid code words induced by aminoglycoside antibiotics. The effect of drug concentration. J Biol Chem 1968; 243:3312-6; PMID:5656371
    • (1968) J Biol Chem , vol.243 , pp. 3312-3316
    • Davies, J.1    Davis, B.D.2
  • 8
    • 0034699519 scopus 로고    scopus 로고
    • Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics
    • PMID:11014183
    • Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V. Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics. Nature 2000; 407:340-8; PMID:11014183; http://dx.doi.org/10.1038/35030019
    • (2000) Nature , vol.407 , pp. 340-348
    • Carter, A.P.1    Clemons, W.M.2    Brodersen, D.E.3    Morgan-Warren, R.J.4    Wimberly, B.T.5    Ramakrishnan, V.6
  • 9
    • 0029825658 scopus 로고    scopus 로고
    • Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic
    • PMID:8910275
    • Fourmy D, Recht MI, Blanchard SC, Puglisi JD. Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic. Science 1996; 274:1367-71; PMID:8910275; http://dx.doi.org/10.1126/science.274. 5291.1367
    • (1996) Science , vol.274 , pp. 1367-1371
    • Fourmy, D.1    Recht, M.I.2    Blanchard, S.C.3    Puglisi, J.D.4
  • 10
    • 0023238983 scopus 로고
    • Interaction of antibiotics with functional sites in 16S ribosomal RNA
    • PMID:2953976
    • Moazed D, Noller HF. Interaction of antibiotics with functional sites in 16S ribosomal RNA. Nature 1987; 327:389-94; PMID:2953976; http://dx.doi.org/10. 1038/327389a0
    • (1987) Nature , vol.327 , pp. 389-394
    • Moazed, D.1    Noller, H.F.2
  • 11
    • 0028138280 scopus 로고
    • Interactions of a small RNA with antibiotic and RNA ligands of the 30S subunit
    • PMID:8065453
    • Purohit P, Stern S. Interactions of a small RNA with antibiotic and RNA ligands of the 30S subunit. Nature 1994; 370:659-62; PMID:8065453; http://dx.doi.org/10.1038/370659a0
    • (1994) Nature , vol.370 , pp. 659-662
    • Purohit, P.1    Stern, S.2
  • 12
    • 0035986708 scopus 로고    scopus 로고
    • Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding a site
    • PMID:12079787
    • Vicens Q, Westhof E. Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding a site. Chem Biol 2002; 9:747-55; PMID:12079787; http://dx.doi.org/10. 1016/S1074-5521(02)00153-9
    • (2002) Chem Biol , vol.9 , pp. 747-755
    • Vicens, Q.1    Westhof, E.2
  • 16
    • 0032881809 scopus 로고    scopus 로고
    • X-ray crystal structures of 70S ribosome functional complexes
    • PMID:10497122
    • Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF. X-ray crystal structures of 70S ribosome functional complexes. Science 1999; 285:2095-104; PMID:10497122; http://dx.doi.org/10.1126/science.285.5436.2095
    • (1999) Science , vol.285 , pp. 2095-2104
    • Cate, J.H.1    Yusupov, M.M.2    Yusupova, G.Z.3    Earnest, T.N.4    Noller, H.F.5
  • 17
    • 78650105927 scopus 로고    scopus 로고
    • Inactivation of the RluD pseudouridine synthase has minimal effects on growth and ribosome function in wild-type Escherichia coli and Salmonella enterica
    • PMID:21037010
    • O'Connor M, Gregory ST. Inactivation of the RluD pseudouridine synthase has minimal effects on growth and ribosome function in wild-type Escherichia coli and Salmonella enterica. J Bacteriol 2011; 193:154-62; PMID:21037010; http://dx.doi.org/10.1128/JB.00970-10
    • (2011) J Bacteriol , vol.193 , pp. 154-162
    • O'Connor, M.1    Gregory, S.T.2
  • 18
    • 77953264623 scopus 로고    scopus 로고
    • Binding of aminoglycoside antibiotics to helix 69 of 23S rRNA
    • PMID:20110260
    • Scheunemann AE, Graham WD, Vendeix FA, Agris PF. Binding of aminoglycoside antibiotics to helix 69 of 23S rRNA. Nucleic Acids Res 2010; 38:3094-105; PMID:20110260; http://dx.doi.org/10.1093/nar/gkp1253
    • (2010) Nucleic Acids Res , vol.38 , pp. 3094-3105
    • Scheunemann, A.E.1    Graham, W.D.2    Vendeix, F.A.3    Agris, P.F.4
  • 20
    • 0036629250 scopus 로고    scopus 로고
    • RRNA modifications and ribosome function
    • PMID:12114023
    • Decatur WA, Fournier MJ. rRNA modifications and ribosome function. Trends Biochem Sci 2002; 27:344-51; PMID:12114023; http://dx.doi.org/10.1016/S0968- 0004(02)02109-6
    • (2002) Trends Biochem Sci , vol.27 , pp. 344-351
    • Decatur, W.A.1    Fournier, M.J.2
  • 21
    • 77950361036 scopus 로고    scopus 로고
    • Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA
    • PMID:19965768
    • Kimura S, Suzuki T. Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA. Nucleic Acids Res 2010; 38:1341-52; PMID:19965768; http://dx.doi.org/10.1093/nar/gkp1073
    • (2010) Nucleic Acids Res , vol.38 , pp. 1341-1352
    • Kimura, S.1    Suzuki, T.2
  • 22
    • 33646806139 scopus 로고    scopus 로고
    • 5C methyltransferase specific for 16 S rRNA nucleotide 1407
    • PMID:16678201
    • 5C methyltransferase specific for 16 S rRNA nucleotide 1407. J Mol Biol 2006; 359:777-86; PMID:16678201; http://dx.doi.org/10.1016/j.jmb.2006.04.007
    • (2006) J Mol Biol , vol.359 , pp. 777-786
    • Andersen, N.M.1    Douthwaite, S.2
  • 23
    • 33344476204 scopus 로고    scopus 로고
    • Identification and characterization of RsmE, the founding member of a new RNA base methyltransferase family
    • PMID:16431987
    • Basturea GN, Rudd KE, Deutscher MP. Identification and characterization of RsmE, the founding member of a new RNA base methyltransferase family. RNA 2006; 12:426-34; PMID:16431987; http://dx.doi.org/10.1261/rna.2283106
    • (2006) RNA , vol.12 , pp. 426-434
    • Basturea, G.N.1    Rudd, K.E.2    Deutscher, M.P.3
  • 24
    • 84855258750 scopus 로고    scopus 로고
    • YhiQ is RsmJ, the methyltransferase responsible for methylation of G1516 in 16S rRNA of E. Coli
    • PMID:22079366
    • Basturea GN, Dague DR, Deutscher MP, Rudd KE. YhiQ is RsmJ, the methyltransferase responsible for methylation of G1516 in 16S rRNA of E. coli. J Mol Biol 2012; 415:16-21; PMID:22079366; http://dx.doi.org/10.1016/j.jmb.2011. 10.044
    • (2012) J Mol Biol , vol.415 , pp. 16-21
    • Basturea, G.N.1    Dague, D.R.2    Deutscher, M.P.3    Rudd, K.E.4
  • 25
    • 0015494418 scopus 로고
    • Mechanism of kasugamycin resistance in Escherichia coli
    • PMID:4336392
    • Helser TL, Davies JE, Dahlberg JE. Mechanism of kasugamycin resistance in Escherichia coli. Nat New Biol 1972; 235:6-9; PMID:4336392; http://dx.doi.org/10.1038/newbio235006a0
    • (1972) Nat New Biol , vol.235 , pp. 6-9
    • Helser, T.L.1    Davies, J.E.2    Dahlberg, J.E.3
  • 26
    • 0018698756 scopus 로고
    • 6-dimethyladenosines near the 3′ end of 16 S ribosomal RNA of Escherichia coli. III. Purification and properties of the methylating enzyme and methylase-30 S interactions
    • PMID:383712
    • 6-dimethyladenosines near the 3′ end of 16 S ribosomal RNA of Escherichia coli. III. Purification and properties of the methylating enzyme and methylase-30 S interactions. J Biol Chem 1979; 254:9094-100; PMID:383712
    • (1979) J Biol Chem , vol.254 , pp. 9094-9100
    • Poldermans, B.1    Roza, L.2    Van Knippenberg, P.H.3
  • 27
    • 52949120327 scopus 로고    scopus 로고
    • 3Ψ methyltransferase RlmH that targets nucleotide 1915 in 23S rRNA
    • PMID:18755835
    • 3Ψ methyltransferase RlmH that targets nucleotide 1915 in 23S rRNA. RNA 2008; 14:2234-44; PMID:18755835; http://dx.doi.org/10.1261/rna.1198108
    • (2008) RNA , vol.14 , pp. 2234-2244
    • Purta, E.1    Kaminska, K.H.2    Kasprzak, J.M.3    Bujnicki, J.M.4    Douthwaite, S.5
  • 28
    • 52949137027 scopus 로고    scopus 로고
    • Identification of pseudouridine methyltransferase in Escherichia coli
    • PMID:18755836
    • Ero R, Peil L, Liiv A, Remme J. Identification of pseudouridine methyltransferase in Escherichia coli. RNA 2008; 14:2223-33; PMID:18755836; http://dx.doi.org/10.1261/rna.1186608
    • (2008) RNA , vol.14 , pp. 2223-2233
    • Ero, R.1    Peil, L.2    Liiv, A.3    Remme, J.4
  • 29
    • 0037088598 scopus 로고    scopus 로고
    • Characterization of the 23 S ribosomal RNA m5U1939 methyltransferase from Escherichia coli
    • PMID:11779873
    • Agarwalla S, Kealey JT, Santi DV, Stroud RM. Characterization of the 23 S ribosomal RNA m5U1939 methyltransferase from Escherichia coli. J Biol Chem 2002; 277:8835-40; PMID:11779873; http://dx.doi.org/10.1074/jbc.M111825200
    • (2002) J Biol Chem , vol.277 , pp. 8835-8840
    • Agarwalla, S.1    Kealey, J.T.2    Santi, D.V.3    Stroud, R.M.4
  • 31
    • 52949109757 scopus 로고    scopus 로고
    • 5C methyltransferase specific for 23S rRNA nucleotide 1962
    • PMID:18786544
    • 5C methyltransferase specific for 23S rRNA nucleotide 1962. J Mol Biol 2008; 383:641-51; PMID:18786544; http://dx.doi.org/10.1016/j.jmb.2008.08. 061
    • (2008) J Mol Biol , vol.383 , pp. 641-651
    • Purta, E.1    O'Connor, M.2    Bujnicki, J.M.3    Douthwaite, S.4
  • 35
    • 0024459873 scopus 로고
    • How antibiotic-producing organisms avoid suicide
    • PMID:2679354
    • Cundliffe E. How antibiotic-producing organisms avoid suicide. Annu Rev Microbiol 1989; 43:207-33; PMID:2679354; http://dx.doi.org/10.1146/annurev.mi. 43.100189.001231
    • (1989) Annu Rev Microbiol , vol.43 , pp. 207-233
    • Cundliffe, E.1
  • 36
    • 84862638890 scopus 로고    scopus 로고
    • Exogenously acquired 16S rRNA methyltransferases found in aminoglycosideresistant pathogenic Gram-negative bacteria: An update
    • Elsevier Ltd
    • Wachino J, Arakawa Y. Exogenously acquired 16S rRNA methyltransferases found in aminoglycosideresistant pathogenic Gram-negative bacteria: an update. Drug Resist Update: 2012 Elsevier Ltd, 2012; 15:133-48.
    • (2012) Drug Resist Update: 2012 , vol.15 , pp. 133-148
    • Wachino, J.1    Arakawa, Y.2
  • 37
    • 84879483942 scopus 로고    scopus 로고
    • Association of the novel aminoglycoside resistance determinant RmtF with NDM carbapenemase in Enterobacteriaceae isolated in India and the UK
    • PMID:23580560
    • Hidalgo L, Hopkins KL, Gutierrez B, Ovejero CM, Shukla S, Douthwaite S, Prasad KN, Woodford N, Gonzalez-Zorn B. Association of the novel aminoglycoside resistance determinant RmtF with NDM carbapenemase in Enterobacteriaceae isolated in India and the UK. J Antimicrob Chemother 2013; 68:1543-50; PMID:23580560; http://dx.doi.org/10.1093/jac/dkt078
    • (2013) J Antimicrob Chemother , vol.68 , pp. 1543-1550
    • Hidalgo, L.1    Hopkins, K.L.2    Gutierrez, B.3    Ovejero, C.M.4    Shukla, S.5    Douthwaite, S.6    Prasad, K.N.7    Woodford, N.8    Gonzalez-Zorn, B.9
  • 38
    • 84876233899 scopus 로고    scopus 로고
    • Coproduction of 16S rRNA methyltransferase RmtD or RmtG with KPC-2 and CTX-M group extended-spectrum β-lactamases in Klebsiella pneumoniae
    • PMID:23459483
    • Bueno MF, Francisco GR, O'Hara JA, de Oliveira Garcia D, Doi Y. Coproduction of 16S rRNA methyltransferase RmtD or RmtG with KPC-2 and CTX-M group extended-spectrum β-lactamases in Klebsiella pneumoniae. Antimicrob Agents Chemother 2013; 57:2397-400; PMID:23459483; http://dx.doi.org/10.1128/ AAC.02108-12
    • (2013) Antimicrob Agents Chemother , vol.57 , pp. 2397-2400
    • Bueno, M.F.1    Francisco, G.R.2    O'Hara, J.A.3    De Oliveira Garcia, D.4    Doi, Y.5
  • 39
    • 84876237735 scopus 로고    scopus 로고
    • Novel 16S rRNA methyltransferase RmtH produced by Klebsiella pneumoniae associated with war-related trauma
    • PMID:23478957
    • O'Hara JA, McGann P, Snesrud EC, Clifford RJ, Waterman PE, Lesho EP, Doi Y. Novel 16S rRNA methyltransferase RmtH produced by Klebsiella pneumoniae associated with war-related trauma. Antimicrob Agents Chemother 2013; 57:2413-6; PMID:23478957; http://dx.doi.org/10.1128/AAC.00266-13
    • (2013) Antimicrob Agents Chemother , vol.57 , pp. 2413-2416
    • O'Hara, J.A.1    McGann, P.2    Snesrud, E.C.3    Clifford, R.J.4    Waterman, P.E.5    Lesho, E.P.6    Doi, Y.7
  • 41
    • 35948935939 scopus 로고    scopus 로고
    • High prevalence of metallo-beta-lactamase and 16S rRNA methylase coproduction among imipenem-resistant Pseudomonas aeruginosa isolates in Brazil
    • PMID:17576840
    • Doi Y, Ghilardi AC, Adams J, de Oliveira Garcia D, Paterson DL. High prevalence of metallo-beta-lactamase and 16S rRNA methylase coproduction among imipenem-resistant Pseudomonas aeruginosa isolates in Brazil. Antimicrob Agents Chemother 2007; 51:3388-90; PMID:17576840; http://dx.doi.org/10.1128/AAC.00443- 07
    • (2007) Antimicrob Agents Chemother , vol.51 , pp. 3388-3390
    • Doi, Y.1    Ghilardi, A.C.2    Adams, J.3    De Oliveira Garcia, D.4    Paterson, D.L.5
  • 42
    • 33646179813 scopus 로고    scopus 로고
    • Recognition of a complex substrate by the KsgA/Dim1 family of enzymes has been conserved throughout evolution
    • PMID:16540698
    • O'Farrell HC, Pulicherla N, Desai PM, Rife JP. Recognition of a complex substrate by the KsgA/Dim1 family of enzymes has been conserved throughout evolution. RNA 2006; 12:725-33; PMID:16540698; http://dx.doi.org/10.1261/rna. 2310406
    • (2006) RNA , vol.12 , pp. 725-733
    • O'Farrell, H.C.1    Pulicherla, N.2    Desai, P.M.3    Rife, J.P.4
  • 43
    • 34548722786 scopus 로고    scopus 로고
    • Identifying modifications in RNA by MALDI mass spectrometry
    • PMID:17673077
    • Douthwaite S, Kirpekar F. Identifying modifications in RNA by MALDI mass spectrometry. Methods Enzymol 2007; 425:3-20; PMID:17673077; http://dx.doi.org/10.1016/S0076-6879(07)25001-3
    • (2007) Methods Enzymol , vol.425 , pp. 3-20
    • Douthwaite, S.1    Kirpekar, F.2
  • 44
    • 84867261155 scopus 로고    scopus 로고
    • Insights into the catalytic mechanism of 16S rRNA methyltransferase RsmE (m≥U1498) from crystal and solution structures
    • PMID:22925577
    • Zhang H, Wan H, Gao ZQ, Wei Y, Wang WJ, Liu GF, Shtykova EV, Xu JH, Dong YH. Insights into the catalytic mechanism of 16S rRNA methyltransferase RsmE (m≥U1498) from crystal and solution structures. J Mol Biol 2012; 423:576-89; PMID:22925577; http://dx.doi.org/10.1016/j.jmb.2012.08.016
    • (2012) J Mol Biol , vol.423 , pp. 576-589
    • Zhang, H.1    Wan, H.2    Gao, Z.Q.3    Wei, Y.4    Wang, W.J.5    Liu, G.F.6    Shtykova, E.V.7    Xu, J.H.8    Dong, Y.H.9
  • 45
    • 33746106088 scopus 로고    scopus 로고
    • Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2′-O-methylations in 16S and 23S rRNAs
    • PMID:16857584
    • Johansen SK, Maus CE, Plikaytis BB, Douthwaite S. Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2′-O- methylations in 16S and 23S rRNAs. Mol Cell 2006; 23:173-82; PMID:16857584; http://dx.doi.org/10.1016/j.molcel.2006.05.044
    • (2006) Mol Cell , vol.23 , pp. 173-182
    • Johansen, S.K.1    Maus, C.E.2    Plikaytis, B.B.3    Douthwaite, S.4
  • 46
    • 0031787478 scopus 로고    scopus 로고
    • A pseudouridine synthase required for the formation of two universally conserved pseudouridines in ribosomal RNA is essential for normal growth of Escherichia coli
    • PMID:9814761
    • Raychaudhuri S, Conrad J, Hall BG, Ofengand J. A pseudouridine synthase required for the formation of two universally conserved pseudouridines in ribosomal RNA is essential for normal growth of Escherichia coli. RNA 1998; 4:1407-17; PMID:9814761; http://dx.doi.org/10.1017/S1355838298981146
    • (1998) RNA , vol.4 , pp. 1407-1417
    • Raychaudhuri, S.1    Conrad, J.2    Hall, B.G.3    Ofengand, J.4
  • 47
    • 33646201327 scopus 로고    scopus 로고
    • Aminoglycoside resistance by ArmA-mediated ribosomal 16S methylation in human bacterial pathogens
    • PMID:16626740
    • Liou GF, Yoshizawa S, Courvalin P, Galimand M. Aminoglycoside resistance by ArmA-mediated ribosomal 16S methylation in human bacterial pathogens. J Mol Biol 2006; 359:358-64; PMID:16626740; http://dx.doi.org/10.1016/j.jmb.2006.03. 038
    • (2006) J Mol Biol , vol.359 , pp. 358-364
    • Liou, G.F.1    Yoshizawa, S.2    Courvalin, P.3    Galimand, M.4
  • 48
    • 67650995904 scopus 로고    scopus 로고
    • The aminoglycoside resistance methyltransferase Sgm impedes RsmF methylation at an adjacent rRNA nucleotide in the ribosomal A site
    • PMID:19509304
    • Cubrilo S, Babić F, Douthwaite S, Maravić Vlahovicek G. The aminoglycoside resistance methyltransferase Sgm impedes RsmF methylation at an adjacent rRNA nucleotide in the ribosomal A site. RNA 2009; 15:1492-7; PMID:19509304; http://dx.doi.org/10.1261/rna.1618809
    • (2009) RNA , vol.15 , pp. 1492-1497
    • Cubrilo, S.1    Babić, F.2    Douthwaite, S.3    Maravić Vlahovicek, G.4
  • 50
    • 84866012733 scopus 로고    scopus 로고
    • Capreomycin susceptibility is increased by TlyA-directed 2′-O-methylation on both ribosomal subunits
    • PMID:22779429
    • Monshupanee T, Johansen SK, Dahlberg AE, Douthwaite S. Capreomycin susceptibility is increased by TlyA-directed 2′-O-methylation on both ribosomal subunits. Mol Microbiol 2012; 85:1194-203; PMID:22779429; http://dx.doi.org/10.1111/j.1365-2958.2012.08168.x
    • (2012) Mol Microbiol , vol.85 , pp. 1194-1203
    • Monshupanee, T.1    Johansen, S.K.2    Dahlberg, A.E.3    Douthwaite, S.4
  • 51
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • PMID:9254694
    • Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997; 25:3389-402; PMID:9254694; http://dx.doi.org/10.1093/nar/25.17.3389
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 53
    • 2442686628 scopus 로고    scopus 로고
    • A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA
    • PMID:15146074
    • Andersen TE, Porse BT, Kirpekar F. A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA. RNA 2004; 10:907-13; PMID:15146074; http://dx.doi.org/10.1261/rna.5259404
    • (2004) RNA , vol.10 , pp. 907-913
    • Andersen, T.E.1    Porse, B.T.2    Kirpekar, F.3
  • 54
    • 0033950924 scopus 로고    scopus 로고
    • Mapping posttranscriptional modifications in 5S ribosomal RNA by MALDI mass spectrometry
    • PMID:10688367
    • Kirpekar F, Douthwaite S, Roepstorff P. Mapping posttranscriptional modifications in 5S ribosomal RNA by MALDI mass spectrometry. RNA 2000; 6:296-306; PMID:10688367; http://dx.doi.org/10.1017/S1355838200992148
    • (2000) RNA , vol.6 , pp. 296-306
    • Kirpekar, F.1    Douthwaite, S.2    Roepstorff, P.3
  • 55
    • 0018459544 scopus 로고
    • Direct chemical method for sequencing RNA
    • PMID:377283
    • Peattie DA. Direct chemical method for sequencing RNA. Proc Natl Acad Sci USA 1979; 76:1760-4; PMID:377283; http://dx.doi.org/10.1073/pnas.76.4.1760
    • (1979) Proc Natl Acad Sci USA , vol.76 , pp. 1760-1764
    • Peattie, D.A.1
  • 56
    • 0020522235 scopus 로고
    • Phe in the free state, in the ternary complex and in the ribosomal A and P sites by chemical probing
    • PMID:6187569
    • Phe in the free state, in the ternary complex and in the ribosomal A and P sites by chemical probing. Eur J Biochem 1983; 131:261-9; PMID:6187569; http://dx.doi.org/10.1111/j.1432-1033.1983.tb07258.x
    • (1983) Eur J Biochem , vol.131 , pp. 261-269
    • Douthwaite, S.1    Garrett, R.A.2    Wagner, R.3
  • 57
    • 0022019308 scopus 로고
    • Specific fragmentation of tRNA and rRNA at a 7-methylguanine residue in the presence of methylated carrier RNA
    • PMID:2578958
    • Zueva VS, Mankin AS, Bogdanov AA, Baratova LA. Specific fragmentation of tRNA and rRNA at a 7-methylguanine residue in the presence of methylated carrier RNA. Eur J Biochem 1985; 146:679-87; PMID:2578958; http://dx.doi.org/10.1111/j. 1432-1033.1985.tb08704.x
    • (1985) Eur J Biochem , vol.146 , pp. 679-687
    • Zueva, V.S.1    Mankin, A.S.2    Bogdanov, A.A.3    Baratova, L.A.4
  • 58
    • 0024241761 scopus 로고
    • Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension
    • PMID:2468070
    • Stern S, Moazed D, Noller HF. Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension. Methods Enzymol 1988; 164:481-9; PMID:2468070; http://dx.doi.org/10.1016/S0076-6879(88)64064-X
    • (1988) Methods Enzymol , vol.164 , pp. 481-489
    • Stern, S.1    Moazed, D.2    Noller, H.F.3


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