Coupling of random amplified polymorphic DNA profiles analysis and high resolution capillary electrophoresis system for the assessment of chemical genotoxicity

Environmental Science and Technology

Volumn 47, Issue 16, 2013, Pages 9505-9513

  Baurand, Pierre Emmanuel ^a   De Vaufleury, Annette ^a,b   Scheifler, Renaud ^a   Capelli, Nicolas ^a  

^a UNIVERSITÉ DE FRANCHE COMTÉ   (France)

^b Department of Health Safety Environment ^*  (France)

Author keywords

[No Author keywords available]

Indexed keywords

CONTROL SAMPLES; DNA FRAGMENTATION; EMBRYONIC DEVELOPMENT; GENOTOXIC EFFECTS; HIGH RESOLUTION; PROFILE MODIFICATION; RANDOM AMPLIFIED POLYMORPHIC DNAS; TERRESTRIAL SNAIL;

ANIMALS; CAPILLARY ELECTROPHORESIS; DNA; MOLLUSCS;

CHEMICAL ANALYSIS;

CADMIUM; DNA FRAGMENT;

CADMIUM; DOSE-RESPONSE RELATIONSHIP; ELECTROKINESIS; EMBRYO; EMBRYONIC DEVELOPMENT; GENOTOXICITY; HATCHING; POLLUTION EXPOSURE; POLYMORPHISM; SNAIL;

ARTICLE; CAPILLARY ELECTROPHORESIS; CONTROLLED STUDY; DNA FRAGMENTATION; EMBRYO; EMBRYO DEVELOPMENT; EMBRYOTOXICITY; GENOTOXICITY; HELIX ASPERSA; HIGH RESOLUTION CAPILLARY ELECTROPHORESIS; NONHUMAN; RANDOM AMPLIFIED POLYMORPHIC DNA;

ANIMALS; CADMIUM; ELECTROPHORESIS, CAPILLARY; EMBRYO, NONMAMMALIAN; HELIX (SNAILS); MUTAGENICITY TESTS; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; TOXICITY TESTS;

EID: 84882622300     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es4021519     Document Type: Article

References (53)

1. Hallare, A.; Nagel, K.; Köhler, H.-R.; Triebskorn, R. Comparative embryotoxicity and proteotoxicity of three carrier solvents to zebrafish (Danio rerio) embryos Ecotoxicol. Environ. Saf. 2006, 63, 378-388
2. ISO 12890. Détermination de la Toxicité vis-à-vis des Embryons et Larves de Poissons d'eau Douce. Méthode Semi-statique. Qualité de l'eau; International Organization for Standardization: Geneva, Switzerland, 1999.
3. ISO 15088. Détermination de la Toxicité Aiguë des Eaux Résiduaires vis-à-vis des Œufs de Poisson-Zèbre (Danio rerio). Qualité de l'eau; International Organization for Standardization: Geneva, Switzerland, 2007.
4. Osterauer, R.; Fassbender, C.; Braunbeck, T.; Koehler, H.-R. Genotoxicity of platinum in embryos of zebrafish (Danio rerio) and ramshorn snail (Marisa cornuarietis) Sci. Total Environ. 2011, 409, 2114-2119
5. Geffard, O.; Budzinski, H.; His, E. The effects of elutriates from PAH and heavy metal polluted sediments on Crassostrea gigas (Thunberg) embryogenesis, larval growth, and bio-accumulation by the larvae of pollutants from sedimentary origin Ecotoxicology 2002, 11, 403-416
6. XP T90-382. Bioindicateur de la Toxicité Potentielle de Milieux Aqueux. Détermination de la Toxicité Potentielle d'échantillons Aqueux sur le Développement Embryo-Larvaire de Bivalve. Qualité de l'eau. AFNOR (Association Française de Normalisation): La Plaine Saint-Denis Cedex, France, 2009.
7. Fritsch, C.; Cœurdassier, M.; Giraudoux, P.; Raoul, F.; Douay, F.; Rieffel, D.; De Vaufleury, A.; Scheifler, R. Spatially explicit analysis of metal transfer to biota: Influence of soil contamination and landscape PLoS One 2011, 6, e20682
8. Scheifler, R.; Gomot-de Vaufleury, A.; Badot, P. M. Transfer of cadmium from plant leaves and vegetable flour to the snail Helix aspersa: Bioaccumulation and effects Ecotoxicol. Environ. Saf. 2002, 53, 148-153
9. Gomot, A. Effects of heavy metals on the development of snails: Heavy metal pollution bioindicators for human health Bull. Acad. Natl. Med. 1997, 181, 59-75
10. ISO 15952. Effects of Pollutants on Juvenile Land Snails (Helicidae), Determination of the Effects on Growth by Soil Contamination; International Organization for Standardization: Geneva, Switzerland, 2006.
11. Gomot-de Vaufleury, A.; Kerhoas, I. Effects of cadmium on the reproductive system of the land snail Helix aspersa Bull. Environ. Contam. Toxicol. 2000, 64, 434-442
12. Druart, C.; Scheifler, R.; De Vaufleury, A. Towards the development of an embryotoxicity bioassay with terrestrial snails: Screening approach for cadmium and pesticides J. Hazard. Mater. 2010, 184, 26-33
13. Druart, C.; Scheifler, R.; Millet, M.; De Vaufleury, A. Landsnail eggs bioassays: A new tool to assess embryotoxicity of contaminants in the solid, liquid, or gaseous phase of soil Appl. Soil Ecol. 2012, 53, 56-64
14. Herber, R. F. M. Cadmium. In Elements and Their Compounds in the Environment; Merian, E.; Anke, M.; Ihnat, M.; Stoeppler, M., Eds.; Wiley-VCH Verlag GmbH: Berlin, 2008; pp 689-708.
15. Hispard, F.; De Vaufleury, A.; Martin, H.; Devaux, S.; Cosson, R. P.; Scheifler, R.; Richert, L.; Berthelot, A.; Badot, P.-M. Effects of subchronic digestive exposure to organic or inorganic cadmium on biomarkers in rat tissues Ecotoxicol. Environ. Saf. 2008, 70, 490-498
16. Radwan, M. A.; El-Gendy, K. S.; Gad, A. F. Biomarkers of oxidative stress in the land snail, Theba pisana for assessing ecotoxicological effects of urban metal pollution Chemosphere 2010, 79, 40-46
17. Schirling, M.; Bohlen, A.; Triebskorn, R.; Köhler, H.-R. An invertebrate embryo test with the apple snail Marisa cornuarietis to assess effects of potential developmental and endocrine disruptors Chemosphere 2006, 64, 1730-1738
18. Roccheri, M. C.; Agnello, M.; Bonaventura, R.; Matranga, V. Cadmium induces the expression of specific stress proteins in sea urchin embryos Biochem. Biophys. Res. Commun. 2004, 321, 80-87
19. Mai, H.; Cachot, J.; Brune, J.; Geffard, O.; Belles, A.; Budzinski, H.; Morin, B. Embryotoxic and genotoxic effects of heavy metals and pesticides on early life stages of Pacific oyster (Crassostrea gigas) Mar. Pollut. Bull. 2012, 64, 2663-2670
20. Fourie, F.; Reinecke, S. A.; Reinecke, A. J. The determination of earthworm species sensitivity differences to cadmium genotoxicity using the comet assay Ecotoxicol. Environ. Saf. 2007, 67, 361-368
21. Noventa, S.; Pavoni, B.; Galloway, T. S. Periwinkle (Littorina littorea) as a sentinel species: a field study integrating chemical and biological analyses Environ. Sci. Technol. 2011, 45, 2634-2640
22. Morin, B.; Filatreau, J.; Vicquelin, L.; Barjhoux, I.; Guinel, S.; Leray-Forget, J.; Cachot, J. Detection of DNA damage in yolk-sac larvae of the Japanese Medaka, Oryzias latipes, by the comet assay Anal. Bioanal. Chem. 2011, 399, 2235-2242
23. Jha, A. N. Ecotoxicological applications and significance of the comet assay Mutagenesis 2008, 23, 207-221
24. Jha, A. N. Genotoxicological studies in aquatic organisms: an overview Mutat. Res., Environ. Mutagen. Relat. Subj. 2004, 552, 1-17
25. Atienzar, F. A.; Cordi, B.; Donkin, M. E.; Evenden, A. J.; Jha, A. N.; Depledge, M. H. Comparison of ultraviolet-induced genotoxicity detected by random amplified polymorphic DNA with chlorophyll fluorescence and growth in a marine macroalgae Palmaria palmata Aquat. Toxicol. 2000, 50, 1-12
26. Rocco, L.; Frenzilli, G.; Zito, G.; Archimandritis, A.; Peluso, C.; Stingo, V. Genotoxic effects in fish induced by pharmacological agents present in the sewage of some Italian water-treatment plants Environ. Toxicol. 2012, 27, 18-25
27. Purohit, H. I.; Raje, D. V.; Kapley, A.; Padmanabhan, P.; Singh, R. N.; Purohit, H. J. Genomics tools in environmental impact assessment Environ. Sci. Technol. 2003, 37, 356A-363A
28. Atienzar, F. A.; Jha, A. N. The random amplified polymorphic DNA (RAPD) assay and related techniques applied to genotoxicity and carcinogenesis studies: A critical review Mutat. Res. 2006, 613, 76-102
29. De Wolf, H.; Blust, R.; Backeljau, T. The use of RAPD in ecotoxicology Mutat. Res., Rev. Mutat. Res. 2004, 566, 249-262
30. Rocco, L.; Frenzilli, G.; Fusco, D.; Peluso, C.; Stingo, V. Evaluation of zebrafish DNA integrity after exposure to pharmacological agents present in aquatic environments Ecotoxicol. Environ. Saf. 2010, 73, 1530-1536
31. Rocco, L.; Izzo, A.; Zito, G.; Peluso, C. Genotoxicity in zebrafish (Danio rerio) exposed to two pharmacological products from an impacted Italian river J. Environ. Anal. Toxicol. 2011, 1, 2161-0525
32. Cambier, S.; Gonzalez, P.; Durrieu, G.; Bourdineaud, J.-P. Cadmium-induced genotoxicity in zebrafish at environmentally relevant doses Ecotoxicol. Environ. Saf. 2010, 73, 312-319
33. Cambier, S.; Gonzalez, P.; Mesmer-Dudons, N.; Brethes, D.; Fujimura, M.; Bourdineaud, J.-P. Effects of dietary methylmercury on the zebrafish brain: Histological, mitochondrial, and gene transcription analyses Biometals 2012, 25, 165-180
34. Cenkci, S.; Yildiz, M.; Cigerci, I. H.; Konuk, M.; Bozdag, A. Toxic chemicals-induced genotoxicity detected by random amplified polymorphic DNA (RAPD) in bean (Phaseolus vulgaris L.) seedlings Chemosphere 2009, 76, 900-906
35. Hughes-Stamm, S. R.; Ashton, K. J.; Van Daal, A. Assessment of DNA degradation and the genotyping success of highly degraded samples Int. J. Legal Med. 2011, 125, 341-348
36. McMurray, C. L.; Hardy, K. J.; Hawkey, P. M. Rapid, automated epidemiological typing of methicillin-resistant Staphylococcus aureus J. Microbiol. Met. 2010, 80, 109-111
37. Macfadyen, S.; Gibson, R.; Raso, L.; Sint, D.; Traugott, M.; Memmott, J. Parasitoid control of aphids in organic and conventional farming systems Agric., Ecosyst. Environ. 2009, 133, 14-18
38. Wu, Y.; Wang, B.; Han, J.; Zhang, Z.; Chen, Y. RAPD-2100 bio-analyzer and 2DGE methods applied to qualitatively and quantitatively assess grain purity of commercial malting barley Eur. Food Res. Technol. 2012, 234, 381-390
39. Lammer, E.; Carr, G. J.; Wendler, K.; Rawlings, J. M.; Belanger, S. E.; Braunbeck, T. Is the fish embryo toxicity test (FET) with the zebrafish (Danio rerio) a potential alternative for the fish acute toxicity test? Comp. Biochem. Phys. Part C: Toxicol. Pharmacol. 2009, 149, 196-209
40. Embry, M. R.; Belanger, S. E.; Braunbeck, T. A.; Galay-Burgos, M.; Halder, M.; Hinton, D. E.; Léonard, M. A.; Lillicrap, A.; Norberg-King, T.; Whale, G. The fish embryo toxicity test as an animal alternative method in hazard and risk assessment and scientific research Aquat. Toxicol. 2010, 97, 79-87
41. Akagi, J.; Khoshmanesh, K.; Evans, B.; Hall, C. J.; Crosier, K. E.; Cooper, J. M.; Crosier, P. S.; Wlodkowic, D. Miniaturized embryo array for automated trapping, immobilization and microperfusion of zebrafish embryos PLoS One 2012, 7, e36630
42. Lokhande, S. R.; Singare, U. P.; Pimple, S. D. Study on physico-chemical parameters of waste water effluents from Taloja industrial area of Mumbai, India Int. J. Ecosyst. 2012, 1, 1-9
43. 2 nanoparticles on soybean (Glycine max) plants Environ. Sci. Technol. 2010, 44, 7315-7320
44. Zhiyi, R.; Haowen, Y. A method for genotoxicity detection using random amplified polymorphism DNA with Danio rerio Ecotoxicol. Environ. Saf. 2004, 58, 96-103
45. Ahmad, M. A.; Gaur, R.; Gupta, M. Comparative biochemical and RAPD analysis in two varieties of rice (Oryza sativa) under arsenic stress by using various biomarkers J. Hazard. Mater. 2012, 217, 141-148
46. Atienzar, F. A.; Cheung, V. V.; Jha, A. N.; Depledge, M. H. Fitness parameters and DNA effects are sensitive indicators of copper-induced toxicity in Daphnia magna Toxicol. Sci. 2001, 59, 241-250
47. Liu, W.; Sun, L.; Zhong, M.; Zhou, Q.; Gong, Z.; Li, P.; Tai, P.; Li, X. Cadmium-induced DNA damage and mutations in Arabidopsis plantlet shoots identified by DNA fingerprinting Chemosphere 2012, 89, 1048-1055
48. Gupta, M.; Sarin, N. B. Heavy metal induced DNA changes in aquatic macrophytes: Random amplified polymorphic DNA analysis and identification of sequence characterized amplified region marker. J. Environ Sci.-China 2009, 21, 686-690
49. Hagger, J. A.; Atienzar, F. A.; Jha, A. N. Genotoxic, cytotoxic, developmental and survival effects of tritiated water in the early life stages of the marine mollusc Mytilus edulis Aquat. Toxicol. 2005, 74, 205-217
50. Orieux, N.; Cambier, S.; Gonzalez, P.; Morin, B.; Adam, C.; Garnier-Laplace, J.; Bourdineaud, J.-P. Genotoxic damages in zebrafish submitted to a polymetallic gradient displayed by the Lot River (France) Ecotoxicol. Environ. Saf. 2011, 74, 974-983
51. Gladish, D. K.; Xu, J.; Niki, T. Apoptosis-like programmed cell death occurs in procambium and ground meristem of Pea (Pisum sativum) root tips exposed to sudden flooding Ann. Bot. 2006, 97, 895-902
52. Liu, W.; Yang, Y. S.; Li, P. J.; Zhou, Q. X.; Xie, L. J.; Han, Y. P. Risk assessment of cadmium-contaminated soil on plant DNA damage using RAPD and physiological indices J. Hazard. Mater. 2009, 161, 878-883
53. Zhou, L.; Li, J.; Lin, X.; Al-Rasheid, K. A. S. Use of RAPD to detect DNA damage induced by nitrofurazone in marine ciliate, Euplotes vannus (Protozoa, Ciliophora) Aquat. Toxicol. 2011, 103, 225-232