-
1
-
-
0742305866
-
Network biology: Understanding the cell's functional organization
-
Barabasi, A.-L. & Oltvai, Z. N. Network biology: understanding the cell's functional organization. Nat. Rev. Genet. 5, 101-113 (2004
-
(2004)
Nat. Rev. Genet
, vol.5
, pp. 101-113
-
-
Barabasi, A.-L.1
Oltvai, Z.N.2
-
2
-
-
79952659846
-
Boosting signal-to-noise in complex biology: Prior knowledge is power
-
Ideker, T., Dutkowski, J. & Hood, L. Boosting signal-to-noise in complex biology: prior knowledge is power. Cell 144, 860-863 (2011
-
(2011)
Cell
, vol.144
, pp. 860-863
-
-
Ideker, T.1
Dutkowski, J.2
Hood, L.3
-
3
-
-
84882417557
-
Interactome networks and human disease
-
Vidal, M., Cusick, M. E. & Barabasi, A.-L. Interactome networks and human disease. Nat. Rev. Genet. 12, 56-68 (2011
-
(2011)
Nat. Rev. Genet
, vol.12
, pp. 56-68
-
-
Vidal, M.1
Cusick, M.E.2
Barabasi, A.-L.3
-
4
-
-
84882314332
-
Network medicine: A networkbased approach to human disease
-
Barabasi, A.-L., Gulbahce, N. & Loscalzo, J. Network medicine: a networkbased approach to human disease. Cell 144, 986-998 (2011
-
(2011)
Cell
, vol.144
, pp. 986-998
-
-
Barabasi, A.-L.1
Gulbahce, N.2
Loscalzo, J.3
-
5
-
-
7244245762
-
Finishing the euchromatic sequence of the human genome
-
International Human Genome Sequencing Consortium
-
International Human Genome Sequencing Consortium. Finishing the euchromatic sequence of the human genome. Nature 431, 931-945 (2004
-
(2004)
Nature
, vol.431
, pp. 931-945
-
-
-
6
-
-
0035799707
-
Lethality and centrality in protein networks
-
Jeong, H., Mason, S. P., Barabasi, A.-L. & Oltvai, Z. N. Lethality and centrality in protein networks. Nature 411, 41-42 (2001
-
(2001)
Nature
, vol.411
, pp. 41-42
-
-
Jeong, H.1
Mason, S.P.2
Barabasi, A.-L.3
Oltvai, Z.N.4
-
7
-
-
16344381521
-
Comparative genomics of centrality and essentiality in three eukaryotic protein- interaction networks
-
Hahn, M. W. & Kern, A. D. Comparative genomics of centrality and essentiality in three eukaryotic protein- interaction networks. Mol. Biol. Evol. 22, 803-806 (2004
-
(2004)
Mol. Biol. Evol
, vol.22
, pp. 803-806
-
-
Hahn, M.W.1
Kern, A.D.2
-
8
-
-
33745712594
-
Why do hubs tend to be essential in protein networks?
-
He, X. & Zhang, J. Why do hubs tend to be essential in protein networks? PLoS Genet. 2, e88 (2006
-
(2006)
PLoS Genet
, vol.2
-
-
He, X.1
Zhang, J.2
-
9
-
-
44349113144
-
Estimating the size of the human interactome
-
Stumpf, M. P. H. et al. Estimating the size of the human interactome. Proc. Natl Acad. Sci. USA 105, 6959-6964 (2008
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 6959-6964
-
-
Stumpf, M.P.H.1
-
10
-
-
84864925344
-
How little do we actually know? On the size of gene regulatory networks
-
Rottger, R., Ruckert, U., Taubert, J. & Baumbach, J. How little do we actually know? On the size of gene regulatory networks. IEEE/ACM Trans. Comput. Biol. Bioinform. 9, 1293-1300 (2012
-
(2012)
IEEE/ACM Trans. Comput. Biol. Bioinform
, vol.9
, pp. 1293-1300
-
-
Rottger, R.1
Ruckert, U.2
Taubert, J.3
Baumbach, J.4
-
11
-
-
0037174670
-
Network motifs: Simple building blocks of complex networks
-
Milo, R. et al. Network motifs: simple building blocks of complex networks. Science 298, 824-827 (2002
-
(2002)
Science
, vol.298
, pp. 824-827
-
-
Milo, R.1
-
12
-
-
0036799752
-
Inferring domain-domain interactions from protein-protein interactions
-
Deng, M., Mehta, S., Sun, F. & Chen, T. Inferring domain-domain interactions from protein-protein interactions. Genome Res. 12, 1540-1548 (2002
-
(2002)
Genome Res
, vol.12
, pp. 1540-1548
-
-
Deng, M.1
Mehta, S.2
Sun, F.3
Chen, T.4
-
13
-
-
25144479967
-
Inferring protein-protein interactions through high-throughput interaction data from diverse organisms
-
Liu, Y., Liu, N. & Zhao, H. Inferring protein-protein interactions through high-throughput interaction data from diverse organisms. Bioinformatics 21, 3279-3285 (2005
-
(2005)
Bioinformatics
, vol.21
, pp. 3279-3285
-
-
Liu, Y.1
Liu, N.2
Zhao, H.3
-
14
-
-
76049100050
-
Missing and spurious interactions and the reconstruction of complex networks
-
Guimera, R. & Sales-Pardo, M. Missing and spurious interactions and the reconstruction of complex networks. Proc. Natl Acad. Sci. USA 106, 22073-22078 (2009
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 22073-22078
-
-
Guimera, R.1
Sales-Pardo, M.2
-
15
-
-
78650274124
-
New insights into protein-protein interaction data lead to increased estimates of the S. Cerevisiae interactome size
-
Sambourg, L. & Thierry-Mieg, N. New insights into protein-protein interaction data lead to increased estimates of the S. cerevisiae interactome size. BMC Bioinformatics 11, 605 (2010
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 605
-
-
Sambourg, L.1
Thierry-Mieg, N.2
-
16
-
-
4444268694
-
Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs
-
Kashtan, N., Itzkovitz, S., Milo, R. & Alon, U. Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs. Bioinformatics 20, 1746-1758 (2004
-
(2004)
Bioinformatics
, vol.20
, pp. 1746-1758
-
-
Kashtan, N.1
Itzkovitz, S.2
Milo, R.3
Alon, U.4
-
17
-
-
39449128256
-
Assessing the exceptionality of network motifs
-
Picard, F., Daudin, J.-J., Koskas, M., Schbath, S. & Robin, S. Assessing the exceptionality of network motifs. J. Comput. Biol. 15, 1-20 (2008
-
(2008)
J. Comput. Biol
, vol.15
, pp. 1-20
-
-
Picard, F.1
Daudin, J.-J.2
Koskas, M.3
Schbath, S.4
Robin, S.5
-
18
-
-
0000207615
-
On the strength of connectedness of a random graph
-
Erdos, P. & Renyi, A. On the strength of connectedness of a random graph. Acta Math Hung. 12, 261-267 (1960
-
(1960)
Acta Math Hung
, vol.12
, pp. 261-267
-
-
Erdos, P.1
Renyi, A.2
-
19
-
-
0038483826
-
Emergence of scaling in random networks
-
Barabasi, A.-L. & Albert, R. Emergence of scaling in random networks. Science 286, 509-512 (1999
-
(1999)
Science
, vol.286
, pp. 509-512
-
-
Barabasi, A.-L.1
Albert, R.2
-
20
-
-
0242692460
-
Duplication models for biological networks
-
Chung, F., Lu, L., Dewey, T. G. & Galas, D. J. Duplication models for biological networks. J. Comput. Biol. 10, 677-687 (2003
-
(2003)
J. Comput. Biol
, Issue.10
, pp. 677-687
-
-
Chung, F.1
Lu, L.2
Dewey, T.G.3
Galas, D.J.4
-
21
-
-
12344273375
-
Modeling interactome: Scale-free or geometric?
-
Przulj, N., Corneil, D. G. & Jurisica, I. Modeling interactome: scale-free or geometric? Bioinformatics 20, 3508-3515 (2004
-
(2004)
Bioinformatics
, vol.20
, pp. 3508-3515
-
-
Przulj, N.1
Corneil, D.G.2
Jurisica, I.3
-
22
-
-
84866361701
-
Circuitry and dynamics of human transcription factor regulatory networks
-
Neph, S. et al. Circuitry and dynamics of human transcription factor regulatory networks. Cell 150, 1274-1286 (2012
-
(2012)
Cell
, vol.150
, pp. 1274-1286
-
-
Neph, S.1
-
23
-
-
53349117774
-
High-quality binary protein interaction map of the yeast interactome network
-
Yu, H. et al. High-quality binary protein interaction map of the yeast interactome network. Science 322, 104-110 (2008
-
(2008)
Science
, vol.322
, pp. 104-110
-
-
Yu, H.1
-
24
-
-
58149218155
-
Empirically controlled mapping of the Caenorhabditis elegans protein-''protein interactome network
-
Simonis, N. et al. Empirically controlled mapping of the Caenorhabditis elegans protein-''protein interactome network. Nat. Methods 6, 47-54 (2009
-
(2009)
Nat. Methods
, vol.6
, pp. 47-54
-
-
Simonis, N.1
-
25
-
-
27144530248
-
Towards a proteome-scale map of the human protein-''protein interaction network
-
Rual, J. F. et al. Towards a proteome-scale map of the human protein-''protein interaction network. Nature 437, 1173-1178 (2005
-
(2005)
Nature
, vol.437
, pp. 1173-1178
-
-
Rual, J.F.1
-
26
-
-
58149305794
-
An empirical framework for binary interactome mapping
-
Venkatesan, K. et al. An empirical framework for binary interactome mapping. Nat. Methods 6, 83-90 (2009
-
(2009)
Nat. Methods
, vol.6
, pp. 83-90
-
-
Venkatesan, K.1
-
27
-
-
84882292291
-
Evidence for network evolution in an Arabidopsis interactome map
-
Arabidopsis Interactome Mapping Consortium
-
Arabidopsis Interactome Mapping Consortium. Evidence for network evolution in an Arabidopsis interactome map. Science 333, 601-607 (2011
-
Science
, vol.333
, Issue.601-607
, pp. 2011
-
-
-
28
-
-
25144498379
-
A human protein protein interaction network: A resource for annotating the proteome
-
Stelzl, U. et al. A human protein protein interaction network: a resource for annotating the proteome. Cell 122, 957-968 (2005
-
(2005)
Cell
, vol.122
, pp. 957-968
-
-
Stelzl, U.1
-
29
-
-
38549146907
-
DBD-taxonomically broad transcription factor predictions: New content and functionality
-
Database issue
-
Wilson, D. et al. DBD-taxonomically broad transcription factor predictions: new content and functionality. Nucleic Acids Res. 36, Database issue D88-D92 (2008
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Wilson, D.1
-
30
-
-
0037161731
-
Comparative assessment of large-scale data sets of protein protein interactions
-
von Mering, C. et al. Comparative assessment of large-scale data sets of protein protein interactions. Nature 417, 399-403 (2002
-
(2002)
Nature
, vol.417
, pp. 399-403
-
-
Von Mering, C.1
-
32
-
-
33847744247
-
How complete are current yeast and human protein-interaction networks?
-
Hart, G. T., Ramani, A. K. & Marcotte, E. M. How complete are current yeast and human protein-interaction networks? Genome Biol. 7, 120 (2006
-
(2006)
Genome Biol
, vol.7
, pp. 120
-
-
Hart, G.T.1
Ramani, A.K.2
Marcotte, E.M.3
-
33
-
-
33847064282
-
Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae
-
Reguly, T. et al. Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae. J. Biol. 5, 11 (2006
-
(2006)
J. Biol
, vol.5
, pp. 11
-
-
Reguly, T.1
-
34
-
-
84975860562
-
Biomolecular network motif counting and discovery by color coding
-
Alon, N., Dao, P., Hajirasouliha, I., Hormozdiari, F. & Sahinalp, S. C. Biomolecular network motif counting and discovery by color coding. Bioinformatics 24, i241-i249 (2008
-
(2008)
Bioinformatics
, vol.24
-
-
Alon, N.1
Dao, P.2
Hajirasouliha, I.3
Hormozdiari, F.4
Sahinalp, S.C.5
-
35
-
-
82955188307
-
Approximating the number of network motifs
-
Gonen, M. & Shavitt, Y. Approximating the number of network motifs. Internet Math. 6, 349-372 (2010
-
(2010)
Internet Math
, vol.6
, pp. 349-372
-
-
Gonen, M.1
Shavitt, Y.2
|