메뉴 건너뛰기




Volumn 20, Issue 18, 2004, Pages 3508-3515

Modeling interactome: Scale-free or geometric?

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ANALYTICAL ERROR; ARTICLE; ARTIFICIAL NEURAL NETWORK; CALCULATION; CLUSTER ANALYSIS; CONTROLLED STUDY; DROSOPHILA MELANOGASTER; FREQUENCY ANALYSIS; GEOMETRY; HYPOTHESIS; INTERMETHOD COMPARISON; NONHUMAN; PREDICTION; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; RANDOMIZATION; SACCHAROMYCES CEREVISIAE; STANDARDIZATION;

EID: 12344273375     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bth436     Document Type: Article
Times cited : (606)

References (32)
  • 1
    • 0036013593 scopus 로고    scopus 로고
    • Statistical mechanics of complex networks
    • Albert,R. and Barabási,A.-L. (2002) Statistical mechanics of complex networks. Rev. Modern Phys., 74, 47-97.
    • (2002) Rev. Modern Phys. , vol.74 , pp. 47-97
    • Albert, R.1    Barabási, A.-L.2
  • 2
    • 0038483826 scopus 로고    scopus 로고
    • Emergence of scaling in random networks
    • Barabási,A.L. and Albert,R. (1999) Emergence of scaling in random networks. Science, 286, 509-512.
    • (1999) Science , vol.286 , pp. 509-512
    • Barabási, A.L.1    Albert, R.2
  • 3
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: Understanding the cell's functional organization
    • Barabási,A.-L. and Oltvai,Z.N. (2004) Network biology: understanding the cell's functional organization. Nat. Rev., 5 101-113.
    • (2004) Nat. Rev. , vol.5 , pp. 101-113
    • Barabási, A.-L.1    Oltvai, Z.N.2
  • 4
    • 12344306136 scopus 로고    scopus 로고
    • Scale-free and hierarchical structures in complex networks
    • AIP Conf. Proc. No. 661, Modeling of Complex Systems: Seventh Granada Lectures Granada (Spain), 2-7 September 2002, Springer-Verlag, Heidelberg
    • Barabási,A.-L., Dezso,Z., Ravasz,E., Yook,S.H. and Oltvai,Z.N. (2003) Scale-free and hierarchical structures in complex networks, AIP Conf. Proc. No. 661, Modeling of Complex Systems: Seventh Granada Lectures Granada (Spain), 2-7 September 2002, Springer-Verlag, Heidelberg, pp.1-16.
    • (2003) , pp. 1-16
    • Barabási, A.-L.1    Dezso, Z.2    Ravasz, E.3    Yook, S.H.4    Oltvai, Z.N.5
  • 6
    • 0037058980 scopus 로고    scopus 로고
    • The average distances in random graphs with given expected degrees
    • Chung,F. and Lu,L. (2002) The average distances in random graphs with given expected degrees. Proc. Natl Acad. Sci., USA, 99, 15879-15882.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 15879-15882
    • Chung, F.1    Lu, L.2
  • 7
    • 0037423295 scopus 로고    scopus 로고
    • Scale-free networks are ultra small
    • Cohen,R. and Havlin,S. (2003) Scale-free networks are ultra small. Phys. Rev. Lett., 90, 058701.
    • (2003) Phys. Rev. Lett. , vol.90 , pp. 058701
    • Cohen, R.1    Havlin, S.2
  • 8
    • 18044399942 scopus 로고    scopus 로고
    • Linear orderings of random geometric graphs
    • Diaz,J., Penrose,M.D., Petit,J. and Serna (2001) Linear orderings of random geometric graphs. J. Algorithm., 38, 78-116.
    • (2001) J. Algorithm , vol.38 , pp. 78-116
    • Diaz, J.1    Penrose, M.D.2    Petit, J.3    Serna, M.4
  • 9
    • 0034555999 scopus 로고    scopus 로고
    • Convergence theorems for some layout measures on random lattice and random geometric graphs
    • Diaz,J., Penrose,M.D., Petit,J. and Serna,M. (2000) Convergence theorems for some layout measures on random lattice and random geometric graphs. Combinatorics, Prob. Comput., 10, 489-511.
    • (2000) Combinatorics, Prob. Comput. , vol.10 , pp. 489-511
    • Diaz, J.1    Penrose, M.D.2    Petit, J.3    Serna, M.4
  • 10
    • 0001540595 scopus 로고
    • On random graphs
    • Erdös,P. and Rényi,A. (1959) On random graphs. Publ. Math., 6, 290-297.
    • (1959) Publ. Math. , vol.6 , pp. 290-297
    • Erdös, P.1    Rényi, A.2
  • 12
    • 0000207615 scopus 로고
    • On the strength of connectedness of a random graph
    • Erdös,P. and Rényi,A. (1961) On the strength of connectedness of a random graph. Acta Math. Sci. Hung., 12, 261-267.
    • (1961) Acta Math. Sci. Hung. , vol.12 , pp. 261-267
    • Erdös, P.1    Rényi, A.2
  • 16
    • 0035799707 scopus 로고    scopus 로고
    • Lethality and centrality in protein networks
    • Jeong,H., Mason,S.P., Barabási,A.L. and Oltvai,Z.N. (2001) Lethality and centrality in protein networks. Nature, 411, 41-42.
    • (2001) Nature , vol.411 , pp. 41-42
    • Jeong, H.1    Mason, S.P.2    Barabási, A.L.3    Oltvai, Z.N.4
  • 17
    • 0346725930 scopus 로고    scopus 로고
    • Unraveling protein interaction networks with near-optimal efficiency
    • Lappe,M. and Holm,L. (2004) Unraveling protein interaction networks with near-optimal efficiency. Nat. Biotechnol., 22 (1), 98-103.
    • (2004) Nat. Biotechnol. , vol.22 , Issue.1 , pp. 98-103
    • Lappe, M.1    Holm, L.2
  • 18
    • 0037012880 scopus 로고    scopus 로고
    • Specificity and stability in topology of protein networks
    • Maslov,S. and Sneppen,K. (2002) Specificity and stability in topology of protein networks. Science, 296, 910-913.
    • (2002) Science , vol.296 , pp. 910-913
    • Maslov, S.1    Sneppen, K.2
  • 21
    • 0038718854 scopus 로고    scopus 로고
    • The structure and function of complex networks
    • Newman,M.E.J. (2003) The structure and function of complex networks. SIAM Rev., 45, 167-256.
    • (2003) SIAM Rev. , vol.45 , pp. 167-256
    • Newman, M.E.J.1
  • 25
  • 26
    • 0036578795 scopus 로고    scopus 로고
    • Network motifs in the transcriptional regulation network of Escherichia coli
    • Shen-Orr,S.S., Milo,R., Mangan,S. and Alon,U. (2002) Network motifs in the transcriptional regulation network of Escherichia coli. Nat. Genet., 31, 64-68.
    • (2002) Nat. Genet. , vol.31 , pp. 64-68
    • Shen-Orr, S.S.1    Milo, R.2    Mangan, S.3    Alon, U.4
  • 27
    • 0035826155 scopus 로고    scopus 로고
    • Exploring complex networks
    • Strogatz,S.H. (2001) Exploring complex networks. Nature 410, 268-276.
    • (2001) Nature , vol.410 , pp. 268-276
    • Strogatz, S.H.1
  • 29
    • 0037161731 scopus 로고    scopus 로고
    • Comparative assessment of large-scale data-sets of protein-protein interactions
    • von Mering,C., Krause,R., Snel,B., Cornell,M., Oliver,S.G., Fields,S. and Bork,P. (2002) Comparative assessment of large-scale data-sets of protein-protein interactions. Nature, 417, 399-403.
    • (2002) Nature , vol.417 , pp. 399-403
    • von Mering, C.1    Krause, R.2    Snel, B.3    Cornell, M.4    Oliver, S.G.5    Fields, S.6    Bork, P.7
  • 30
    • 0032482432 scopus 로고    scopus 로고
    • Collective dynamics of 'small-world' networks
    • Watts,D.J. and Strogatz,S.H. (1998) Collective dynamics of 'small-world' networks. Nature, 393, 440-442.
    • (1998) Nature , vol.393 , pp. 440-442
    • Watts, D.J.1    Strogatz, S.H.2
  • 31
    • 0003736078 scopus 로고    scopus 로고
    • 2nd edn. Prentice-Hall, Upper Saddle River, NJ
    • West,D.B. (2001) Introduction to Graph Theory, 2nd edn. Prentice-Hall, Upper Saddle River, NJ.
    • (2001) Introduction to Graph Theory
    • West, D.B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.