-
1
-
-
84869036539
-
Circadian topology of metabolism
-
10.1038/nature11704
-
Bass J, (2012) Circadian topology of metabolism. Nature 491: 348-356. doi:10.1038/nature11704. PubMed: 23151577.
-
(2012)
Nature
, vol.491
, pp. 348-356
-
-
Bass, J.1
-
2
-
-
77958504804
-
Clocks not winding down: unravelling circadian networks
-
10.1038/nrm2995
-
Zhang EE, Kay SA, (2010) Clocks not winding down: unravelling circadian networks. Nat Rev Mol Cell Biol 11: 764-776. doi:10.1038/nrm2995. PubMed: 20966970.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 764-776
-
-
Zhang, E.E.1
Kay, S.A.2
-
3
-
-
12244296161
-
No transcription-translation feedback in circadian rhythm of KaiC phosphorylation
-
10.1126/science.1102540
-
Tomita J, Nakajima M, Kondo T, Iwasaki H, (2005) No transcription-translation feedback in circadian rhythm of KaiC phosphorylation. Science 307: 251-254. doi:10.1126/science.1102540. PubMed: 15550625.
-
(2005)
Science
, vol.307
, pp. 251-254
-
-
Tomita, J.1
Nakajima, M.2
Kondo, T.3
Iwasaki, H.4
-
4
-
-
69549101750
-
Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus
-
10.1073/pnas.0902587106
-
Ito H, Mutsuda M, Murayama Y, Tomita J, Hosokawa N, et al. (2009) Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus. Proc Natl Acad Sci U S A 106: 14168-14173. doi:10.1073/pnas.0902587106. PubMed: 19666549.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 14168-14173
-
-
Ito, H.1
Mutsuda, M.2
Murayama, Y.3
Tomita, J.4
Hosokawa, N.5
-
5
-
-
77957054558
-
Intermolecular associations determine the dynamics of the circadian KaiABC oscillator
-
10.1073/pnas.1002119107
-
Qin X, Byrne M, Mori T, Zou P, Williams DR, et al. (2010) Intermolecular associations determine the dynamics of the circadian KaiABC oscillator. Proc Natl Acad Sci U S A 107: 14805-14810. doi:10.1073/pnas.1002119107. PubMed: 20679240.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 14805-14810
-
-
Qin, X.1
Byrne, M.2
Mori, T.3
Zou, P.4
Williams, D.R.5
-
6
-
-
17244373578
-
Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro
-
10.1126/science.1108451
-
Nakajima M, Imai K, Ito H, Nishiwaki T, Murayama Y, et al. (2005) Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro. Science 308: 414-415. doi:10.1126/science.1108451. PubMed: 15831759.
-
(2005)
Science
, vol.308
, pp. 414-415
-
-
Nakajima, M.1
Imai, K.2
Ito, H.3
Nishiwaki, T.4
Murayama, Y.5
-
7
-
-
79251566511
-
Circadian clocks in human red blood cells
-
10.1038/nature09702
-
O'Neill JS, Reddy AB, (2011) Circadian clocks in human red blood cells. Nature 469: 498-503. doi:10.1038/nature09702. PubMed: 21270888.
-
(2011)
Nature
, vol.469
, pp. 498-503
-
-
O'Neill, J.S.1
Reddy, A.B.2
-
8
-
-
79251539603
-
Circadian rhythms persist without transcription in a eukaryote
-
10.1038/nature09654
-
O'Neill JS, van Ooijen G, Dixon LE, Troein C, Corellou F, et al. (2011) Circadian rhythms persist without transcription in a eukaryote. Nature 469: 554-558. doi:10.1038/nature09654. PubMed: 21270895.
-
(2011)
Nature
, vol.469
, pp. 554-558
-
-
O'Neill, J.S.1
van Ooijen, G.2
Dixon, L.E.3
Troein, C.4
Corellou, F.5
-
9
-
-
84861452257
-
Peroxiredoxins are conserved markers of circadian rhythms
-
22622569
-
Edgar RS, Green EW, Zhao Y, van Ooijen G, Olmedo M, et al. (2012) Peroxiredoxins are conserved markers of circadian rhythms. Nature 485: 459-464. PubMed: 22622569.
-
(2012)
Nature
, vol.485
, pp. 459-464
-
-
Edgar, R.S.1
Green, E.W.2
Zhao, Y.3
van Ooijen, G.4
Olmedo, M.5
-
10
-
-
84870951025
-
Circadian regulation of olfaction and an evolutionarily conserved, nontranscriptional marker in Caenorhabditis elegans
-
10.1073/pnas.1211705109
-
Olmedo M, O'Neill JS, Edgar RS, Valekunja UK, Reddy AB, et al. (2012) Circadian regulation of olfaction and an evolutionarily conserved, nontranscriptional marker in Caenorhabditis elegans. Proc Natl Acad Sci U S A 109: 20479-20484. doi:10.1073/pnas.1211705109. PubMed: 23185015.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 20479-20484
-
-
Olmedo, M.1
O'Neill, J.S.2
Edgar, R.S.3
Valekunja, U.K.4
Reddy, A.B.5
-
11
-
-
84867905300
-
Non-transcriptional oscillators in circadian timekeeping
-
10.1016/j.tibs.2012.07.006
-
van Ooijen G, Millar AJ, (2012) Non-transcriptional oscillators in circadian timekeeping. Trends Biochem Sci 37: 484-492. doi:10.1016/j.tibs.2012.07.006. PubMed: 22917814.
-
(2012)
Trends Biochem Sci
, vol.37
, pp. 484-492
-
-
van Ooijen, G.1
Millar, A.J.2
-
12
-
-
79955890550
-
Kinases and phosphatases in the mammalian circadian clock
-
10.1016/j.febslet.2011.02.038
-
Reischl S, Kramer A, (2011) Kinases and phosphatases in the mammalian circadian clock. FEBS Lett 585: 1393-1399. doi:10.1016/j.febslet.2011.02.038. PubMed: 21376720.
-
(2011)
FEBS Lett
, vol.585
, pp. 1393-1399
-
-
Reischl, S.1
Kramer, A.2
-
13
-
-
70349330769
-
Post-translational modifications in circadian rhythms
-
10.1016/j.tibs.2009.06.006
-
Mehra A, Baker CL, Loros JJ, Dunlap JC, (2009) Post-translational modifications in circadian rhythms. Trends Biochem Sci 34: 483-490. doi:10.1016/j.tibs.2009.06.006. PubMed: 19740663.
-
(2009)
Trends Biochem Sci
, vol.34
, pp. 483-490
-
-
Mehra, A.1
Baker, C.L.2
Loros, J.J.3
Dunlap, J.C.4
-
14
-
-
33847779219
-
Post-translational modifications regulate the ticking of the circadian clock
-
10.1038/nrm2106
-
Gallego M, Virshup DM, (2007) Post-translational modifications regulate the ticking of the circadian clock. Nat Rev Mol Cell Biol 8: 139-148. doi:10.1038/nrm2106. PubMed: 17245414.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 139-148
-
-
Gallego, M.1
Virshup, D.M.2
-
15
-
-
79952101339
-
Casein kinase 1: Complexity in the family
-
10.1016/j.biocel.2010.12.004
-
Cheong JK, Virshup DM, (2011) Casein kinase 1: Complexity in the family. Int J Biochem Cell Biol 43: 465-469. doi:10.1016/j.biocel.2010.12.004. PubMed: 21145983.
-
(2011)
Int J Biochem Cell Biol
, vol.43
, pp. 465-469
-
-
Cheong, J.K.1
Virshup, D.M.2
-
16
-
-
78650432933
-
High-throughput chemical screen identifies a novel potent modulator of cellular circadian rhythms and reveals CKIalpha as a clock regulatory kinase
-
Hirota T, Lee JW, Lewis WG, Zhang EE, Breton G, et al. (2010) High-throughput chemical screen identifies a novel potent modulator of cellular circadian rhythms and reveals CKIalpha as a clock regulatory kinase. PLOS Biol 8: e1000559.
-
(2010)
PLOS Biol
, vol.8
-
-
Hirota, T.1
Lee, J.W.2
Lewis, W.G.3
Zhang, E.E.4
Breton, G.5
-
17
-
-
75849128796
-
Essential roles of CKIdelta and CKIepsilon in the mammalian circadian clock
-
10.1073/pnas.0906651106
-
Lee H, Chen R, Lee Y, Yoo S, Lee C, (2009) Essential roles of CKIdelta and CKIepsilon in the mammalian circadian clock. Proc Natl Acad Sci U S A 106: 21359-21364. doi:10.1073/pnas.0906651106. PubMed: 19948962.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 21359-21364
-
-
Lee, H.1
Chen, R.2
Lee, Y.3
Yoo, S.4
Lee, C.5
-
18
-
-
79961004102
-
Kinetics of doubletime kinase-dependent degradation of the Drosophila period protein
-
10.1074/jbc.M111.243618
-
Syed S, Saez L, Young MW, (2011) Kinetics of doubletime kinase-dependent degradation of the Drosophila period protein. J Biol Chem 286: 27654-27662. doi:10.1074/jbc.M111.243618. PubMed: 21659538.
-
(2011)
J Biol Chem
, vol.286
, pp. 27654-27662
-
-
Syed, S.1
Saez, L.2
Young, M.W.3
-
19
-
-
80052238651
-
Circadian conformational change of the Neurospora clock protein FREQUENCY triggered by clustered hyperphosphorylation of a basic domain
-
10.1016/j.molcel.2011.06.033
-
Querfurth C, Diernfellner AC, Gin E, Malzahn E, Höfer T, et al. (2011) Circadian conformational change of the Neurospora clock protein FREQUENCY triggered by clustered hyperphosphorylation of a basic domain. Mol Cell 43: 713-722. doi:10.1016/j.molcel.2011.06.033. PubMed: 21884974.
-
(2011)
Mol Cell
, vol.43
, pp. 713-722
-
-
Querfurth, C.1
Diernfellner, A.C.2
Gin, E.3
Malzahn, E.4
Höfer, T.5
-
20
-
-
0032503969
-
double-time is a novel Drosophila clock gene that regulates PERIOD protein accumulation
-
10.1016/S0092-8674(00)81224-6
-
Price JL, Blau J, Rothenfluh A, Abodeely M, Kloss B, et al. (1998) double-time is a novel Drosophila clock gene that regulates PERIOD protein accumulation. Cell 94: 83-95. doi:10.1016/S0092-8674(00)81224-6. PubMed: 9674430.
-
(1998)
Cell
, vol.94
, pp. 83-95
-
-
Price, J.L.1
Blau, J.2
Rothenfluh, A.3
Abodeely, M.4
Kloss, B.5
-
21
-
-
79955540602
-
NEMO/NLK phosphorylates PERIOD to initiate a time-delay phosphorylation circuit that sets circadian clock speed
-
10.1016/j.cell.2011.04.002
-
Chiu JC, Ko HW, Edery I, (2011) NEMO/NLK phosphorylates PERIOD to initiate a time-delay phosphorylation circuit that sets circadian clock speed. Cell 145: 357-370. doi:10.1016/j.cell.2011.04.002. PubMed: 21514639.
-
(2011)
Cell
, vol.145
, pp. 357-370
-
-
Chiu, J.C.1
Ko, H.W.2
Edery, I.3
-
22
-
-
34347363069
-
A DOUBLETIME kinase binding domain on the Drosophila PERIOD protein is essential for its hyperphosphorylation, transcriptional repression, and circadian clock function
-
10.1128/MCB.02339-06
-
Kim EY, Ko HW, Yu W, Hardin PE, Edery I, (2007) A DOUBLETIME kinase binding domain on the Drosophila PERIOD protein is essential for its hyperphosphorylation, transcriptional repression, and circadian clock function. Mol Cell Biol 27: 5014-5028. doi:10.1128/MCB.02339-06. PubMed: 17452449.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 5014-5028
-
-
Kim, E.Y.1
Ko, H.W.2
Yu, W.3
Hardin, P.E.4
Edery, I.5
-
23
-
-
0032504041
-
The Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon
-
10.1016/S0092-8674(00)81225-8
-
Kloss B, Price JL, Saez L, Blau J, Rothenfluh A, et al. (1998) The Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon. Cell 94: 97-107. doi:10.1016/S0092-8674(00)81225-8. PubMed: 9674431.
-
(1998)
Cell
, vol.94
, pp. 97-107
-
-
Kloss, B.1
Price, J.L.2
Saez, L.3
Blau, J.4
Rothenfluh, A.5
-
24
-
-
62849110192
-
DOUBLETIME plays a noncatalytic role to mediate CLOCK phosphorylation and repress CLOCK-dependent transcription within the Drosophila circadian clock
-
10.1128/MCB.01777-08
-
Yu W, Zheng H, Price JL, Hardin PE, (2009) DOUBLETIME plays a noncatalytic role to mediate CLOCK phosphorylation and repress CLOCK-dependent transcription within the Drosophila circadian clock. Mol Cell Biol 29: 1452-1458. doi:10.1128/MCB.01777-08. PubMed: 19139270.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 1452-1458
-
-
Yu, W.1
Zheng, H.2
Price, J.L.3
Hardin, P.E.4
-
25
-
-
33748687611
-
CKI and CKII mediate the FREQUENCY-dependent phosphorylation of the WHITE COLLAR complex to close the Neurospora circadian negative feedback loop
-
10.1101/gad.1463506
-
He Q, Cha J, Lee HC, Yang Y, Liu Y, (2006) CKI and CKII mediate the FREQUENCY-dependent phosphorylation of the WHITE COLLAR complex to close the Neurospora circadian negative feedback loop. Genes Dev 20: 2552-2565. doi:10.1101/gad.1463506. PubMed: 16980584.
-
(2006)
Genes Dev
, vol.20
, pp. 2552-2565
-
-
He, Q.1
Cha, J.2
Lee, H.C.3
Yang, Y.4
Liu, Y.5
-
26
-
-
84863230177
-
Phylogeny and molecular evolution of the green algae
-
10.1080/07352689.2011.615705
-
Leliaert F, Smith RS, Moreau H, Herron MD, Verbruggen H, et al. (2012) Phylogeny and molecular evolution of the green algae. Crit Rev Plant Sci 31: 1-46. doi:10.1080/07352689.2011.615705.
-
(2012)
Crit Rev Plant Sci
, vol.31
, pp. 1-46
-
-
Leliaert, F.1
Smith, R.S.2
Moreau, H.3
Herron, M.D.4
Verbruggen, H.5
-
27
-
-
33746830079
-
Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features
-
10.1073/pnas.0604795103
-
Derelle E, Ferraz C, Rombauts S, Rouzé P, Worden AZ, et al. (2006) Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Proc Natl Acad Sci U S A 103: 11647-11652. doi:10.1073/pnas.0604795103. PubMed: 16868079.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 11647-11652
-
-
Derelle, E.1
Ferraz, C.2
Rombauts, S.3
Rouzé, P.4
Worden, A.Z.5
-
28
-
-
40349094722
-
3-D ultrastructure of O. tauri: electron cryotomography of an entire eukaryotic cell
-
10.1371/journal.pone.0000749
-
Henderson GP, Gan L, Jensen GJ, (2007) 3-D ultrastructure of O. tauri: electron cryotomography of an entire eukaryotic cell. PLOS ONE 2: e749. doi:10.1371/journal.pone.0000749. PubMed: 17710148.
-
(2007)
PLOS ONE
, vol.2
-
-
Henderson, G.P.1
Gan, L.2
Jensen, G.J.3
-
29
-
-
73249122674
-
Clocks in the green lineage: comparative functional analysis of the circadian architecture of the picoeukaryote Ostreococcus
-
doi:10.1105/tpc.109.068825. PubMed: 19948792, PubMed, Sanchez F
-
Corellou F, Schwartz C, Motta JP, el Djouani-Tahri B, Sanchez F, et al (2009) Clocks in the green lineage: comparative functional analysis of the circadian architecture of the picoeukaryote Ostreococcus. Plant Cell 21: 3436-3449. doi:10.1105/tpc.109.068825. PubMed: 19948792.
-
(2009)
Plant Cell
, vol.21
, pp. 3436-3449
-
-
Corellou, F.1
Schwartz, C.2
Motta, J.P.3
el Djouani-Tahri, B.4
Sanchez, F.5
-
30
-
-
77951935233
-
Orchestrated transcription of biological processes in the marine picoeukaryote Ostreococcus exposed to light/dark cycles
-
10.1186/1471-2164-11-192
-
Monnier A, Liverani S, Bouvet R, Jesson B, Smith JQ, et al. (2010) Orchestrated transcription of biological processes in the marine picoeukaryote Ostreococcus exposed to light/dark cycles. BMC Genomics 11: 192. doi:10.1186/1471-2164-11-192. PubMed: 20307298.
-
(2010)
BMC Genomics
, vol.11
, pp. 192
-
-
Monnier, A.1
Liverani, S.2
Bouvet, R.3
Jesson, B.4
Smith, J.Q.5
-
31
-
-
80052028934
-
Shotgun proteomic analysis of the unicellular alga Ostreococcus tauri
-
10.1016/j.jprot.2011.05.028
-
Le Bihan T, Martin SF, Chirnside ES, van Ooijen G, Barrios-Llerena ME, et al. (2011) Shotgun proteomic analysis of the unicellular alga Ostreococcus tauri. J Proteomics 74: 2060-2070. doi:10.1016/j.jprot.2011.05.028. PubMed: 21635980.
-
(2011)
J Proteomics
, vol.74
, pp. 2060-2070
-
-
Le Bihan, T.1
Martin, S.F.2
Chirnside, E.S.3
van Ooijen, G.4
Barrios-Llerena, M.E.5
-
32
-
-
79957491160
-
Proteasome function is required for biological timing throughout the twenty-four hour cycle
-
10.1016/j.cub.2011.03.060
-
van Ooijen G, Dixon LE, Troein C, Millar AJ, (2011) Proteasome function is required for biological timing throughout the twenty-four hour cycle. Curr Biol 21: 869-875. doi:10.1016/j.cub.2011.03.060. PubMed: 21530263.
-
(2011)
Curr Biol
, vol.21
, pp. 869-875
-
-
van Ooijen, G.1
Dixon, L.E.2
Troein, C.3
Millar, A.J.4
-
33
-
-
84867626009
-
Genomic Transformation of the Picoeukaryote Ostreococcus tauri
-
22825291
-
van Ooijen G, Knox K, Kis K, Bouget FY, Millar AJ, (2012) Genomic Transformation of the Picoeukaryote Ostreococcus tauri. J Vis Exp. PubMed: 22825291.
-
(2012)
J Vis Exp
-
-
van Ooijen, G.1
Knox, K.2
Kis, K.3
Bouget, F.Y.4
Millar, A.J.5
-
34
-
-
77957000375
-
Entrainment of disrupted circadian behavior through inhibition of casein kinase 1 (CK1) enzymes
-
10.1073/pnas.1005101107
-
Meng QJ, Maywood ES, Bechtold DA, Lu WQ, Li J, et al. (2010) Entrainment of disrupted circadian behavior through inhibition of casein kinase 1 (CK1) enzymes. Proc Natl Acad Sci U S A 107: 15240-15245. doi:10.1073/pnas.1005101107. PubMed: 20696890.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 15240-15245
-
-
Meng, Q.J.1
Maywood, E.S.2
Bechtold, D.A.3
Lu, W.Q.4
Li, J.5
-
35
-
-
34848913124
-
Beta-TrCP1-mediated degradation of PERIOD2 is essential for circadian dynamics
-
10.1177/0748730407303926
-
Reischl S, Vanselow K, Westermark PO, Thierfelder N, Maier B, et al. (2007) Beta-TrCP1-mediated degradation of PERIOD2 is essential for circadian dynamics. J Biol Rhythms 22: 375-386. doi:10.1177/0748730407303926. PubMed: 17876059.
-
(2007)
J Biol Rhythms
, vol.22
, pp. 375-386
-
-
Reischl, S.1
Vanselow, K.2
Westermark, P.O.3
Thierfelder, N.4
Maier, B.5
-
36
-
-
15044343742
-
Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation
-
10.1128/MCB.25.7.2795-2807.2005
-
Eide EJ, Woolf MF, Kang H, Woolf P, Hurst W, et al. (2005) Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation. Mol Cell Biol 25: 2795-2807. doi:10.1128/MCB.25.7.2795-2807.2005. PubMed: 15767683.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 2795-2807
-
-
Eide, E.J.1
Woolf, M.F.2
Kang, H.3
Woolf, P.4
Hurst, W.5
-
37
-
-
66449087281
-
The circadian system in higher plants
-
10.1146/annurev.arplant.043008.092054
-
Harmer SL, (2009) The circadian system in higher plants. Annu Rev Plant Biol 60: 357-377. doi:10.1146/annurev.arplant.043008.092054. PubMed: 19575587.
-
(2009)
Annu Rev Plant Biol
, vol.60
, pp. 357-377
-
-
Harmer, S.L.1
-
38
-
-
84866864299
-
Phosphorylation in the plant circadian system
-
10.1016/j.tplants.2012.06.008
-
Kusakina J, Dodd AN, (2012) Phosphorylation in the plant circadian system. Trends Plant Sci 17: 575-583. doi:10.1016/j.tplants.2012.06.008. PubMed: 22784827.
-
(2012)
Trends Plant Sci
, vol.17
, pp. 575-583
-
-
Kusakina, J.1
Dodd, A.N.2
-
39
-
-
77955376205
-
Impairment of protein trafficking upon overexpression and mutation of optineurin
-
10.1371/journal.pone.0011547
-
Park B, Ying H, Shen X, Park JS, Qiu Y, et al. (2010) Impairment of protein trafficking upon overexpression and mutation of optineurin. PLOS ONE 5: e11547. doi:10.1371/journal.pone.0011547. PubMed: 20634958.
-
(2010)
PLOS ONE
, vol.5
-
-
Park, B.1
Ying, H.2
Shen, X.3
Park, J.S.4
Qiu, Y.5
-
40
-
-
34547111542
-
An inhibitor of casein kinase I epsilon induces phase delays in circadian rhythms under free-running and entrained conditions
-
10.1124/jpet.107.122846
-
Badura L, Swanson T, Adamowicz W, Adams J, Cianfrogna J, et al. (2007) An inhibitor of casein kinase I epsilon induces phase delays in circadian rhythms under free-running and entrained conditions. J Pharmacol Exp Ther 322: 730-738. doi:10.1124/jpet.107.122846. PubMed: 17502429.
-
(2007)
J Pharmacol Exp Ther
, vol.322
, pp. 730-738
-
-
Badura, L.1
Swanson, T.2
Adamowicz, W.3
Adams, J.4
Cianfrogna, J.5
-
41
-
-
79952921586
-
Navigating the kinome
-
10.1038/nchembio.530
-
Metz JT, Johnson EF, Soni NB, Merta PJ, Kifle L, et al. (2011) Navigating the kinome. Nat Chem Biol 7: 200-202. doi:10.1038/nchembio.530. PubMed: 21336281.
-
(2011)
Nat Chem Biol
, vol.7
, pp. 200-202
-
-
Metz, J.T.1
Johnson, E.F.2
Soni, N.B.3
Merta, P.J.4
Kifle, L.5
-
42
-
-
53349117774
-
High-quality binary protein interaction map of the yeast interactome network
-
10.1126/science.1158684
-
Yu H, Braun P, Yildirim MA, Lemmens I, Venkatesan K, et al. (2008) High-quality binary protein interaction map of the yeast interactome network. Science 322: 104-110. doi:10.1126/science.1158684. PubMed: 18719252.
-
(2008)
Science
, vol.322
, pp. 104-110
-
-
Yu, H.1
Braun, P.2
Yildirim, M.A.3
Lemmens, I.4
Venkatesan, K.5
-
43
-
-
77956444369
-
Characterization of two members of the cryptochrome/photolyase family from Ostreococcus tauri provides insights into the origin and evolution of cryptochromes
-
10.1111/j.1365-3040.2010.02168.x
-
Heijde M, Zabulon G, Corellou F, Ishikawa T, Brazard J, et al. (2010) Characterization of two members of the cryptochrome/photolyase family from Ostreococcus tauri provides insights into the origin and evolution of cryptochromes. Plant Cell Environ 33: 1614-1626. doi:10.1111/j.1365-3040.2010.02168.x. PubMed: 20444223.
-
(2010)
Plant Cell Environ
, vol.33
, pp. 1614-1626
-
-
Heijde, M.1
Zabulon, G.2
Corellou, F.3
Ishikawa, T.4
Brazard, J.5
-
44
-
-
0037053314
-
The circadian regulatory proteins BMAL1 and cryptochromes are substrates of casein kinase Iepsilon
-
10.1074/jbc.M111466200
-
Eide EJ, Vielhaber EL, Hinz WA, Virshup DM, (2002) The circadian regulatory proteins BMAL1 and cryptochromes are substrates of casein kinase Iepsilon. J Biol Chem 277: 17248-17254. doi:10.1074/jbc.M111466200. PubMed: 11875063.
-
(2002)
J Biol Chem
, vol.277
, pp. 17248-17254
-
-
Eide, E.J.1
Vielhaber, E.L.2
Hinz, W.A.3
Virshup, D.M.4
-
45
-
-
84870932225
-
From quiescence to proliferation: Cdk oscillations drive the mammalian cell cycle
-
23130001
-
Gérard C, Goldbeter A, (2012) From quiescence to proliferation: Cdk oscillations drive the mammalian cell cycle. Front Physiol 3: 413. PubMed: 23130001.
-
(2012)
Front Physiol
, vol.3
, pp. 413
-
-
Gérard, C.1
Goldbeter, A.2
-
46
-
-
0032578987
-
Model scenarios for evolution of the eukaryotic cell cycle
-
10.1098/rstb.1998.0352
-
Novak B, Csikasz-Nagy A, Gyorffy B, Nasmyth K, Tyson JJ, (1998) Model scenarios for evolution of the eukaryotic cell cycle. Philos Trans R Soc Lond B Biol Sci 353: 2063-2076. doi:10.1098/rstb.1998.0352. PubMed: 10098216.
-
(1998)
Philos Trans R Soc Lond B Biol Sci
, vol.353
, pp. 2063-2076
-
-
Novak, B.1
Csikasz-Nagy, A.2
Gyorffy, B.3
Nasmyth, K.4
Tyson, J.J.5
-
47
-
-
84863841760
-
An inhibitor of casein kinase 1 epsilon/delta partially normalizes the manic-like behaviors of the ClockDelta19 mouse
-
10.1097/FBP.0b013e32835651fd
-
Arey R, McClung CA, (2012) An inhibitor of casein kinase 1 epsilon/delta partially normalizes the manic-like behaviors of the ClockDelta19 mouse. Behav Pharmacol 23: 392-396. doi:10.1097/FBP.0b013e32835651fd. PubMed: 22743604.
-
(2012)
Behav Pharmacol
, vol.23
, pp. 392-396
-
-
Arey, R.1
McClung, C.A.2
-
48
-
-
84867705767
-
An evaluation of polymorphisms in casein kinase 1 delta and epsilon genes in major psychiatric disorders
-
10.1016/j.neulet.2012.08.070
-
Matsunaga S, Ikeda M, Kishi T, Fukuo Y, Aleksic B, et al. (2012) An evaluation of polymorphisms in casein kinase 1 delta and epsilon genes in major psychiatric disorders. Neurosci Lett 529: 66-69. doi:10.1016/j.neulet.2012.08.070. PubMed: 22981886.
-
(2012)
Neurosci Lett
, vol.529
, pp. 66-69
-
-
Matsunaga, S.1
Ikeda, M.2
Kishi, T.3
Fukuo, Y.4
Aleksic, B.5
-
49
-
-
79953328303
-
Casein kinase 1-dependent phosphorylation of familial advanced sleep phase syndrome-associated residues controls PERIOD 2 stability
-
10.1074/jbc.M111.224014
-
Shanware NP, Hutchinson JA, Kim SH, Zhan L, Bowler MJ, et al. (2011) Casein kinase 1-dependent phosphorylation of familial advanced sleep phase syndrome-associated residues controls PERIOD 2 stability. J Biol Chem 286: 12766-12774. doi:10.1074/jbc.M111.224014. PubMed: 21324900.
-
(2011)
J Biol Chem
, vol.286
, pp. 12766-12774
-
-
Shanware, N.P.1
Hutchinson, J.A.2
Kim, S.H.3
Zhan, L.4
Bowler, M.J.5
-
50
-
-
52149109334
-
The genetics of mammalian circadian order and disorder: implications for physiology and disease
-
10.1038/nrg2430
-
Takahashi JS, Hong HK, Ko CH, McDearmon EL, (2008) The genetics of mammalian circadian order and disorder: implications for physiology and disease. Nat Rev Genet 9: 764-775. doi:10.1038/nrg2430. PubMed: 18802415.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 764-775
-
-
Takahashi, J.S.1
Hong, H.K.2
Ko, C.H.3
McDearmon, E.L.4
-
51
-
-
84866672445
-
Cellular circadian clocks in mood disorders
-
10.1177/0748730412456367
-
McCarthy MJ, Welsh DK, (2012) Cellular circadian clocks in mood disorders. J Biol Rhythms 27: 339-352. doi:10.1177/0748730412456367. PubMed: 23010657.
-
(2012)
J Biol Rhythms
, vol.27
, pp. 339-352
-
-
McCarthy, M.J.1
Welsh, D.K.2
-
52
-
-
77957266390
-
Quantitative analysis of regulatory flexibility under changing environmental conditions
-
21045818
-
Edwards KD, Akman OE, Knox K, Lumsden PJ, Thomson AW, et al. (2010) Quantitative analysis of regulatory flexibility under changing environmental conditions. Mol Syst Biol 6: 424. PubMed: 21045818.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 424
-
-
Edwards, K.D.1
Akman, O.E.2
Knox, K.3
Lumsden, P.J.4
Thomson, A.W.5
-
53
-
-
84870680444
-
The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium
-
10.1074/mcp.O112.021543
-
Côté RG, Griss J, Dianes JA, Wang R, Wright JC, et al. (2012) The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium. Mol Cell Proteomics 11: 1682-1689. doi:10.1074/mcp.O112.021543. PubMed: 22949509.
-
(2012)
Mol Cell Proteomics
, vol.11
, pp. 1682-1689
-
-
Côté, R.G.1
Griss, J.2
Dianes, J.A.3
Wang, R.4
Wright, J.C.5
-
54
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
10.1038/nbt.1511
-
Cox J, Mann M, (2008) MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat Biotechnol 26: 1367-1372. doi:10.1038/nbt.1511. PubMed: 19029910.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
55
-
-
77955019084
-
Parallelization of the MAFFT multiple sequence alignment program
-
10.1093/bioinformatics/btq224
-
Katoh K, Toh H, (2010) Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics 26: 1899-1900. doi:10.1093/bioinformatics/btq224. PubMed: 20427515.
-
(2010)
Bioinformatics
, vol.26
, pp. 1899-1900
-
-
Katoh, K.1
Toh, H.2
-
56
-
-
65449188232
-
Jalview Version 2--a multiple sequence alignment editor and analysis workbench
-
10.1093/bioinformatics/btp033
-
Waterhouse AM, Procter JB, Martin DM, Clamp M, Barton GJ, (2009) Jalview Version 2--a multiple sequence alignment editor and analysis workbench. Bioinformatics 25: 1189-1191. doi:10.1093/bioinformatics/btp033. PubMed: 19151095.
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.3
Clamp, M.4
Barton, G.J.5
-
57
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML Web servers
-
10.1080/10635150802429642
-
Stamatakis A, Hoover P, Rougemont J, (2008) A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol 57: 758-771. doi:10.1080/10635150802429642. PubMed: 18853362.
-
(2008)
Syst Biol
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
58
-
-
0035031966
-
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
-
10.1093/oxfordjournals.molbev.a003851
-
Whelan S, Goldman N, (2001) A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol 18: 691-699. doi:10.1093/oxfordjournals.molbev.a003851. PubMed: 11319253.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 691-699
-
-
Whelan, S.1
Goldman, N.2
-
59
-
-
52649145895
-
-
Mol, Proteomics: Cell Publishing House, a tool to predict kinase-specific phosphorylation sites in hierarchy
-
Xue Y, Ren J, Gao X, Jin C, Wen L, et al. (2008). GPS 2: 0, a tool to predict kinase-specific phosphorylation sites in hierarchy. Mol Proteomics: Cell Publishing House 7: 1598-1608.
-
(2008)
GPS
, vol.2
, pp. 0
-
-
Xue, Y.1
Ren, J.2
Gao, X.3
Jin, C.4
Wen, L.5
-
60
-
-
34250689932
-
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
-
10.1073/pnas.0611046104
-
Palenik B, Grimwood J, Aerts A, Rouzé P, Salamov A, et al. (2007) The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Proc Natl Acad Sci U S A 104: 7705-7710. doi:10.1073/pnas.0611046104. PubMed: 17460045.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 7705-7710
-
-
Palenik, B.1
Grimwood, J.2
Aerts, A.3
Rouzé, P.4
Salamov, A.5
-
61
-
-
69649109364
-
Circos: an information aesthetic for comparative genomics
-
10.1101/gr.092759.109
-
Krzywinski M, Schein J, Birol I, Connors J, Gascoyne R, et al. (2009) Circos: an information aesthetic for comparative genomics. Genome Res 19: 1639-1645. doi:10.1101/gr.092759.109. PubMed: 19541911.
-
(2009)
Genome Res
, vol.19
, pp. 1639-1645
-
-
Krzywinski, M.1
Schein, J.2
Birol, I.3
Connors, J.4
Gascoyne, R.5
|