Proteasome function is required for biological timing throughout the twenty-four hour cycle

Current Biology

Volumn 21, Issue 10, 2011, Pages 869-875

  Van Ooijen, Gerben ^a   Dixon, Laura E ^a   Troein, Carl ^a,b   Millar, Andrew J ^a  

^a UNIVERSITY OF EDINBURGH   (United Kingdom)

^b LUND UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

LUCIFERASE; PROTEASOME; TRANSCRIPTION FACTOR CLOCK;

ARTICLE; BIOLOGICAL MODEL; CIRCADIAN RHYTHM; FEEDBACK SYSTEM; GENE EXPRESSION REGULATION; GREEN ALGA; METABOLISM; PHYSIOLOGY; WESTERN BLOTTING;

BLOTTING, WESTERN; CHLOROPHYTA; CIRCADIAN CLOCKS; CIRCADIAN RHYTHM; CLOCK PROTEINS; FEEDBACK, PHYSIOLOGICAL; GENE EXPRESSION REGULATION; LUCIFERASES; MODELS, BIOLOGICAL; PROTEASOME ENDOPEPTIDASE COMPLEX;

CYANOBACTERIA; EUKARYOTA; OSTREOCOCCUS; OSTREOCOCCUS TAURI; PROTISTA;

EID: 79957491160     PISSN: 09609822     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cub.2011.03.060     Document Type: Article

References (43)

1. M. Nakajima, K. Imai, H. Ito, T. Nishiwaki, Y. Murayama, H. Iwasaki, T. Oyama, and T. Kondo Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro Science 308 2005 414 415 (Pubitemid 40530079)
2. J. Tomita, M. Nakajima, T. Kondo, and H. Iwasaki No transcription- translation feedback in circadian rhythm of KaiC phosphorylation Science 307 2005 251 254 (Pubitemid 40116239)
3. S.I. Godinho, E.S. Maywood, L. Shaw, V. Tucci, A.R. Barnard, L. Busino, M. Pagano, R. Kendall, M.M. Quwailid, and M.R. Romero The after-hours mutant reveals a role for Fbxl3 in determining mammalian circadian period Science 316 2007 897 900 (Pubitemid 46764281)
4. M.H. Hastings, E.S. Maywood, and J.S. O'Neill Cellular circadian pacemaking and the role of cytosolic rhythms Curr. Biol. 18 2008 R805 R815
5. A. Mehra, C.L. Baker, J.J. Loros, and J.C. Dunlap Post-translational modifications in circadian rhythms Trends Biochem. Sci. 34 2009 483 490
6. M. Merrow, G. Mazzotta, Z. Chen, and T. Roenneberg The right place at the right time: Regulation of daily timing by phosphorylation Genes Dev. 20 2006 2629-3
7. E.J. Eide, M.F. Woolf, H. Kang, P. Woolf, W. Hurst, F. Camacho, E.L. Vielhaber, A. Giovanni, and D.M. Virshup Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation Mol. Cell. Biol. 25 2005 2795 2807 (Pubitemid 40381641)
8. C. Iitaka, K. Miyazaki, T. Akaike, and N. Ishida A role for glycogen synthase kinase-3beta in the mammalian circadian clock J. Biol. Chem. 280 2005 29397 29402 (Pubitemid 41177011)
9. B. Maier, S. Wendt, J.T. Vanselow, T. Wallach, S. Reischl, S. Oehmke, A. Schlosser, and A. Kramer A large-scale functional RNAi screen reveals a role for CK2 in the mammalian circadian clock Genes Dev. 23 2009 708 718
10. J. Lee, Y. Lee, M.J. Lee, E. Park, S.H. Kang, C.H. Chung, K.H. Lee, and K. Kim Dual modification of BMAL1 by SUMO2/3 and ubiquitin promotes circadian activation of the CLOCK/BMAL1 complex Mol. Cell. Biol. 28 2008 6056 6065
11. E.E. Zhang, A.C. Liu, T. Hirota, L.J. Miraglia, G. Welch, P.Y. Pongsawakul, X. Liu, A. Atwood, J.W. Huss 3rd, and J. Janes A genome-wide RNAi screen for modifiers of the circadian clock in human cells Cell 139 2009 199 210
12. J.S. O'Neill, G. van Ooijen, L.E. Dixon, C. Troein, F. Corellou, F.Y. Bouget, A.B. Reddy, and A.J. Millar Circadian rhythms persist without transcription in a eukaryote Nature 469 2011 554 558
13. J.S. O'Neill, and A.B. Reddy Circadian clocks in human red blood cells Nature 469 2011 498 503
14. F. Corellou, C. Schwartz, J.P. Motta, B. Djouani-Tahri, F. Sanchez, and F.Y. Bouget Clocks in the green lineage: Comparative functional analysis of the circadian architecture of the picoeukaryote ostreococcus Plant Cell 21 2009 3436 3449
15. S.L. Harmer The circadian system in higher plants Annu. Rev. Plant Biol. 60 2009 357 377
16. P. Más, W.Y. Kim, D.E. Somers, and S.A. Kay Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana Nature 426 2003 567 570 (Pubitemid 37522643)
17. B. Djouani-Tahri, J.P. Motta, F.Y. Bouget, and F. Corellou Insights into the regulation of the core clock component TOC1 in the green picoeukaryote Ostreococcus Plant Signal. Behav. 5 2010 332 335
18. C. Troein, F. Corellou, L.E. Dixon, G. van Ooijen, J.S. O'Neill, F.Y. Bouget, and A.J. Millar Multiple light inputs to a simple clock circuit allow complex biological rhythms Plant J. 2011 10.1111/j.1365-313X.2011.04489.x Published online January 10, 2011
19. A.J. Millar, S.R. Short, N.H. Chua, and S.A. Kay A novel circadian phenotype based on firefly luciferase expression in transgenic plants Plant Cell 4 1992 1075 1087
20. O.E. Akman, M.L. Guerriero, L. Loewe, and C. Troein Complementary approaches to understanding the plant circadian clock Electronic Proceedings in Theoretical Computer Science 19 2010 1 19
21. H.R. Song, and I.A. Carré DET1 regulates the proteasomal degradation of LHY, a component of the Arabidopsis circadian clock Plant Mol. Biol. 57 2005 761 771 (Pubitemid 40938361)
22. I. Roig-Villanova, J. Bou, C. Sorin, P.F. Devlin, and J.F. Martínez-García Identification of primary target genes of phytochrome signaling. Early transcriptional control during shade avoidance responses in Arabidopsis Plant Physiol. 141 2006 85 96 (Pubitemid 43956184)
23. A. Para, E.M. Farré, T. Imaizumi, J.L. Pruneda-Paz, F.G. Harmon, and S.A. Kay PRR3 Is a vascular regulator of TOC1 stability in the Arabidopsis circadian clock Plant Cell 19 2007 3462 3473
24. A. Baudry, S. Ito, Y.H. Song, A.A. Strait, T. Kiba, S. Lu, R. Henriques, J.L. Pruneda-Paz, N.H. Chua, and E.M. Tobin F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression Plant Cell 22 2010 606 622
25. W.Y. Kim, S. Fujiwara, S.S. Suh, J. Kim, Y. Kim, L. Han, K. David, J. Putterill, H.G. Nam, and D.E. Somers ZEITLUPE is a circadian photoreceptor stabilized by GIGANTEA in blue light Nature 449 2007 356 360 (Pubitemid 47443478)
26. A. Monnier, S. Liverani, R. Bouvet, B. Jesson, J.Q. Smith, J. Mosser, F. Corellou, and F.Y. Bouget Orchestrated transcription of biological processes in the marine picoeukaryote Ostreococcus exposed to light/dark cycles BMC Genomics 11 2010 192
27. C. Gu, I. Kolodziejek, J. Misas-Villamil, T. Shindo, T. Colby, M. Verdoes, K.H. Richau, J. Schmidt, H.S. Overkleeft, and R.A. van der Hoorn Proteasome activity profiling: A simple, robust and versatile method revealing subunit-selective inhibitors and cytoplasmic, defense-induced proteasome activities Plant J. 62 2010 160 170
28. L. Meng, R. Mohan, B.H. Kwok, M. Elofsson, N. Sin, and C.M. Crews Epoxomicin, a potent and selective proteasome inhibitor, exhibits in vivo antiinflammatory activity Proc. Natl. Acad. Sci. USA 96 1999 10403 10408 (Pubitemid 29422570)
29. Y. Yang, J. Kitagaki, R.M. Dai, Y.C. Tsai, K.L. Lorick, R.L. Ludwig, S.A. Pierre, J.P. Jensen, I.V. Davydov, and P. Oberoi Inhibitors of ubiquitin-activating enzyme (E1), a new class of potential cancer therapeutics Cancer Res. 67 2007 9472 9481 (Pubitemid 47535937)
30. N. Nakamichi, T. Kiba, R. Henriques, T. Mizuno, N.H. Chua, and H. Sakakibara PSEUDO-RESPONSE REGULATORS 9, 7, and 5 are transcriptional repressors in the Arabidopsis circadian clock Plant Cell 22 2010 594 605
31. J.L. Pruneda-Paz, G. Breton, A. Para, and S.A. Kay A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clock Science 323 2009 1481 1485
32. C.R. McClung Plant circadian rhythms Plant Cell 18 2006 792 803 (Pubitemid 43956136)
33. J.C. Woolum A re-examination of the role of the nucleus in generating the circadian rhythm in Acetabularia J. Biol. Rhythms 6 1991 129 136
34. B.M. Sweeney, and F.T. Haxo Persistence of a photosynthetic rhythm in enucleated Acetabularia Science 134 1961 1361 1363
35. D. Morse, P.M. Milos, E. Roux, and J.W. Hastings Circadian regulation of bioluminescence in Gonyaulax involves translational control Proc. Natl. Acad. Sci. USA 86 1989 172 176
36. P.L. Lakin-Thomas Transcriptional feedback oscillators: Maybe, maybe not. J. Biol. Rhythms 21 2006 83 92
37. S.B. Khalsa, D. Whitmore, B. Bogart, and G.D. Block Evidence for a central role of transcription in the timing mechanism of a circadian clock Am. J. Physiol. 271 1996 C1646 C1651
38. S.B. Khalsa, D. Whitmore, and G.D. Block Stopping the circadian pacemaker with inhibitors of protein synthesis Proc. Natl. Acad. Sci. USA 89 1992 10862 10866
39. A. Hall, P.A. Karplus, and L.B. Poole Typical 2-Cys peroxiredoxins - structures, mechanisms and functions FEBS J. 276 2009 2469 2477
40. M. Baier, and K.J. Dietz The plant 2-Cys peroxiredoxin BAS1 is a nuclear-encoded chloroplast protein: Its expressional regulation, phylogenetic origin, and implications for its specific physiological function in plants Plant J. 12 1997 179 190 (Pubitemid 27312774)
41. M. Moulager, A. Monnier, B. Jesson, R. Bouvet, J. Mosser, C. Schwartz, L. Garnier, F. Corellou, and F.Y. Bouget Light-dependent regulation of cell division in Ostreococcus: Evidence for a major transcriptional input Plant Physiol. 144 2007 1360 1369 (Pubitemid 47037452)
42. X. Qin, M. Byrne, T. Mori, P. Zou, D.R. Williams, H. McHaourab, and C.H. Johnson Intermolecular associations determine the dynamics of the circadian KaiABC oscillator Proc. Natl. Acad. Sci. USA 107 2010 14805 14810
43. K.D. Edwards, O.E. Akman, K. Knox, P.J. Lumsden, A.W. Thomson, P.E. Brown, A. Pokhilko, L. Kozma-Bognar, F. Nagy, D.A. Rand, and A.J. Millar Quantitative analysis of regulatory flexibility under changing environmental conditions Mol. Syst. Biol. 6 2010 424