-
1
-
-
70449634957
-
Predicting new molecular targets for known drugs
-
doi:10.1038/nature08506
-
Keiser MJ, Setola V, Irwin JJ, Laggner C, Abbas AI, et al. (2009) Predicting new molecular targets for known drugs. Nature 462: 175-181. doi:10.1038/nature08506. PubMed: 19881490.
-
(2009)
Nature
, vol.462
, pp. 175-181
-
-
Keiser, M.J.1
Setola, V.2
Irwin, J.J.3
Laggner, C.4
Abbas, A.I.5
-
2
-
-
47249146126
-
Drug target identification using side-effect similarity
-
doi:10.1126/science.1158140
-
Campillos M, Kuhn M, Gavin AC, Jensen LJ, Bork P, (2008) Drug target identification using side-effect similarity. Science 321: 263-266. doi:10.1126/science.1158140. PubMed: 18621671.
-
(2008)
Science
, vol.321
, pp. 263-266
-
-
Campillos, M.1
Kuhn, M.2
Gavin, A.C.3
Jensen, L.J.4
Bork, P.5
-
3
-
-
32344440237
-
Analysis of drug-induced effect patterns to link structure and side effects of medicines
-
doi:10.1038/nchembio747
-
Fliri AF, Loging WT, Thadeio PF, Volkmann RA, (2005) Analysis of drug-induced effect patterns to link structure and side effects of medicines. Nat Chem Biol 1: 389-397. doi:10.1038/nchembio747. PubMed: 16370374.
-
(2005)
Nat Chem Biol
, vol.1
, pp. 389-397
-
-
Fliri, A.F.1
Loging, W.T.2
Thadeio, P.F.3
Volkmann, R.A.4
-
4
-
-
84855882587
-
Novel computational approaches to polypharmacology as a means to define responses to individual drugs
-
doi:10.1146/annurev-pharmtox-010611-134630
-
Xie L, Kinnings SL, Bourne PE, (2012) Novel computational approaches to polypharmacology as a means to define responses to individual drugs. Annu Rev Pharmacol Toxicol 52: 361-379. doi:10.1146/annurev-pharmtox-010611-134630. PubMed: 22017683.
-
(2012)
Annu Rev Pharmacol Toxicol
, vol.52
, pp. 361-379
-
-
Xie, L.1
Kinnings, S.L.2
Bourne, P.E.3
-
5
-
-
80051831092
-
Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease
-
Dudley JT, Sirota M, Shenoy M, Pai RK, Roedder S, et al. (2011) Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease. Sci Transl Med 3: 96ra76.
-
(2011)
Sci Transl Med
, vol.3
-
-
Dudley, J.T.1
Sirota, M.2
Shenoy, M.3
Pai, R.K.4
Roedder, S.5
-
6
-
-
77957044703
-
Discovery of drug mode of action and drug repositioning from transcriptional responses
-
doi:10.1073/pnas.1000138107
-
Iorio F, Bosotti R, Scacheri E, Belcastro V, Mithbaokar P, et al. (2010) Discovery of drug mode of action and drug repositioning from transcriptional responses. Proc Natl Acad Sci U S A 107: 14621-14626. doi:10.1073/pnas.1000138107. PubMed: 20679242.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 14621-14626
-
-
Iorio, F.1
Bosotti, R.2
Scacheri, E.3
Belcastro, V.4
Mithbaokar, P.5
-
7
-
-
36949022890
-
Predictive QSAR modeling workflow, model applicability domains, and virtual screening
-
doi:10.2174/138161207782794257
-
Tropsha A, Golbraikh A, (2007) Predictive QSAR modeling workflow, model applicability domains, and virtual screening. Curr Pharm Des 13: 3494-3504. doi:10.2174/138161207782794257. PubMed: 18220786.
-
(2007)
Curr Pharm Des
, vol.13
, pp. 3494-3504
-
-
Tropsha, A.1
Golbraikh, A.2
-
8
-
-
81855199785
-
Computational methods for early predictive safety assessment from biological and chemical data
-
doi:10.1517/17425255.2011.632632
-
Nigsch F, Lounkine E, McCarren P, Cornett B, Glick M, et al. (2011) Computational methods for early predictive safety assessment from biological and chemical data. Expert Opin Drug Metab Toxicol 7: 1497-1511. doi:10.1517/17425255.2011.632632. PubMed: 22050465.
-
(2011)
Expert Opin Drug Metab Toxicol
, vol.7
, pp. 1497-1511
-
-
Nigsch, F.1
Lounkine, E.2
McCarren, P.3
Cornett, B.4
Glick, M.5
-
9
-
-
33749335282
-
The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease
-
doi:10.1126/science.1132939
-
Lamb J, Crawford ED, Peck D, Modell JW, Blat IC, et al. (2006) The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease. Science 313: 1929-1935. doi:10.1126/science.1132939. PubMed: 17008526.
-
(2006)
Science
, vol.313
, pp. 1929-1935
-
-
Lamb, J.1
Crawford, E.D.2
Peck, D.3
Modell, J.W.4
Blat, I.C.5
-
10
-
-
84867338003
-
Discovery and preclinical validation of drug indications using compendia of public gene expression data
-
Sirota M, Dudley JT, Kim J, Chiang AP, Morgan AA, et al. (2011) Discovery and preclinical validation of drug indications using compendia of public gene expression data. Sci Transl Med 3: 96ra77.
-
(2011)
Sci Transl Med
, vol.3
-
-
Sirota, M.1
Dudley, J.T.2
Kim, J.3
Chiang, A.P.4
Morgan, A.A.5
-
11
-
-
61349126145
-
Similar compounds searching system by using the gene expression microarray database
-
doi:10.1016/j.toxlet.2008.08.009
-
Toyoshiba H, Sawada H, Naeshiro I, Horinouchi A, (2009) Similar compounds searching system by using the gene expression microarray database. Toxicol Lett 186: 52-57. doi:10.1016/j.toxlet.2008.08.009. PubMed: 18801419.
-
(2009)
Toxicol Lett
, vol.186
, pp. 52-57
-
-
Toyoshiba, H.1
Sawada, H.2
Naeshiro, I.3
Horinouchi, A.4
-
12
-
-
79953072390
-
Building the process-drug-side effect network to discover the relationship between biological Processes and side effects
-
doi:10.1186/1471-2105-12-S1-S2
-
Lee S, Lee K, Song M, Lee D, (2011) Building the process-drug-side effect network to discover the relationship between biological Processes and side effects. BMC Bioinformatics 12: S2. doi:10.1186/1471-2105-12-S1-S2.
-
(2011)
BMC Bioinformatics
, vol.12
-
-
Lee, S.1
Lee, K.2
Song, M.3
Lee, D.4
-
13
-
-
33645317063
-
hERG potassium channels and cardiac arrhythmia
-
doi:10.1038/nature04710
-
Sanguinetti MC, Tristani-Firouzi M, (2006) hERG potassium channels and cardiac arrhythmia. Nature 440: 463-469. doi:10.1038/nature04710. PubMed: 16554806.
-
(2006)
Nature
, vol.440
, pp. 463-469
-
-
Sanguinetti, M.C.1
Tristani-Firouzi, M.2
-
14
-
-
0029994611
-
Blockade of HERG channels expressed in Xenopus oocytes by the histamine receptor antagonists terfenadine and astemizole
-
doi:10.1016/0014-5793(96)00355-9
-
Suessbrich H, Waldegger S, Lang F, Busch AE, (1996) Blockade of HERG channels expressed in Xenopus oocytes by the histamine receptor antagonists terfenadine and astemizole. FEBS Lett 385: 77-80. doi:10.1016/0014-5793(96)00355-9. PubMed: 8641472.
-
(1996)
FEBS Lett
, vol.385
, pp. 77-80
-
-
Suessbrich, H.1
Waldegger, S.2
Lang, F.3
Busch, A.E.4
-
15
-
-
4244207380
-
Blockage of the HERG human cardiac K+ channel by the gastrointestinal prokinetic agent cisapride
-
9374794
-
Mohammad S, Zhou Z, Gong Q, January CT, (1997) Blockage of the HERG human cardiac K+ channel by the gastrointestinal prokinetic agent cisapride. Am J Physiol 273: H2534-H2538. PubMed: 9374794.
-
(1997)
Am J Physiol
, vol.273
-
-
Mohammad, S.1
Zhou, Z.2
Gong, Q.3
January, C.T.4
-
16
-
-
0029761822
-
HERG, a primary human ventricular target of the nonsedating antihistamine terfenadine
-
doi:10.1161/01.CIR.94.4.817
-
Roy M, Dumaine R, Brown AM, (1996) HERG, a primary human ventricular target of the nonsedating antihistamine terfenadine. Circulation 94: 817-823. doi:10.1161/01.CIR.94.4.817. PubMed: 8772706.
-
(1996)
Circulation
, vol.94
, pp. 817-823
-
-
Roy, M.1
Dumaine, R.2
Brown, A.M.3
-
17
-
-
79952446402
-
Modelling the long QT syndrome with induced pluripotent stem cells
-
doi:10.1038/nature09747
-
Itzhaki I, Maizels L, Huber I, Zwi-Dantsis L, Caspi O, et al. (2011) Modelling the long QT syndrome with induced pluripotent stem cells. Nature 471: 225-229. doi:10.1038/nature09747. PubMed: 21240260.
-
(2011)
Nature
, vol.471
, pp. 225-229
-
-
Itzhaki, I.1
Maizels, L.2
Huber, I.3
Zwi-Dantsis, L.4
Caspi, O.5
-
18
-
-
77957729169
-
Patient-specific induced pluripotent stem-cell models for long-QT syndrome
-
doi:10.1056/NEJMoa0908679
-
Moretti A, Bellin M, Welling A, Jung CB, Lam JT, et al. (2010) Patient-specific induced pluripotent stem-cell models for long-QT syndrome. N Engl J Med 363: 1397-1409. doi:10.1056/NEJMoa0908679. PubMed: 20660394.
-
(2010)
N Engl J Med
, vol.363
, pp. 1397-1409
-
-
Moretti, A.1
Bellin, M.2
Welling, A.3
Jung, C.B.4
Lam, J.T.5
-
19
-
-
78650503264
-
Profiling diverse compounds by flux- and electrophysiology-based primary screens for inhibition of human Ether-a-go-go related gene potassium channels
-
doi:10.1089/adt.2010.0339
-
Zou B, Yu H, Babcock JJ, Chanda P, Bader JS, et al. (2010) Profiling diverse compounds by flux- and electrophysiology-based primary screens for inhibition of human Ether-a-go-go related gene potassium channels. Assay Drug Dev Technol 8: 743-754. doi:10.1089/adt.2010.0339. PubMed: 21158688.
-
(2010)
Assay Drug Dev Technol
, vol.8
, pp. 743-754
-
-
Zou, B.1
Yu, H.2
Babcock, J.J.3
Chanda, P.4
Bader, J.S.5
-
20
-
-
84869215742
-
Identification and characterization of a compound that protects cardiac tissue from human Ether-a-go-go-related gene (hERG)-related drug-induced arrhythmias
-
doi:10.1074/jbc.M112.380162
-
Potet F, Lorinc AN, Chaigne S, Hopkins CR, Venkataraman R, et al. (2012) Identification and characterization of a compound that protects cardiac tissue from human Ether-a-go-go-related gene (hERG)-related drug-induced arrhythmias. J Biol Chem 287: 39613-39625. doi:10.1074/jbc.M112.380162. PubMed: 23033485.
-
(2012)
J Biol Chem
, vol.287
, pp. 39613-39625
-
-
Potet, F.1
Lorinc, A.N.2
Chaigne, S.3
Hopkins, C.R.4
Venkataraman, R.5
-
21
-
-
4143111393
-
In vivo identification of genes that modify ether-a-go-go-related gene activity in Caenorhabditis elegans may also affect human cardiac arrhythmia
-
doi:10.1073/pnas.0306005101
-
Petersen CI, McFarland TR, Stepanovic SZ, Yang P, Reiner DJ, et al. (2004) In vivo identification of genes that modify ether-a-go-go-related gene activity in Caenorhabditis elegans may also affect human cardiac arrhythmia. Proc Natl Acad Sci U S A 101: 11773-11778. doi:10.1073/pnas.0306005101. PubMed: 15280551.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 11773-11778
-
-
Petersen, C.I.1
McFarland, T.R.2
Stepanovic, S.Z.3
Yang, P.4
Reiner, D.J.5
-
22
-
-
33847724787
-
Zebrafish assays for drug toxicity screening
-
doi:10.1517/17425255.2.2.231
-
Rubinstein AL, (2006) Zebrafish assays for drug toxicity screening. Expert Opin Drug Metab Toxicol 2: 231-240. doi:10.1517/17425255.2.2.231. PubMed: 16866609.
-
(2006)
Expert Opin Drug Metab Toxicol
, vol.2
, pp. 231-240
-
-
Rubinstein, A.L.1
-
23
-
-
0037166235
-
Functional up-regulation of HERG K+ channels in neoplastic hematopoietic cells
-
doi:10.1074/jbc.M200592200
-
Smith GA, Tsui HW, Newell EW, Jiang X, Zhu XP, et al. (2002) Functional up-regulation of HERG K+ channels in neoplastic hematopoietic cells. J Biol Chem 277: 18528-18534. doi:10.1074/jbc.M200592200. PubMed: 11893742.
-
(2002)
J Biol Chem
, vol.277
, pp. 18528-18534
-
-
Smith, G.A.1
Tsui, H.W.2
Newell, E.W.3
Jiang, X.4
Zhu, X.P.5
-
24
-
-
48849089075
-
Pharmacological separation of hEAG and hERG K+ channel function in the human mammary carcinoma cell line MCF-7
-
doi:18497958
-
Roy J, Vantol B, Cowley EA, Blay J, Linsdell P, (2008) Pharmacological separation of hEAG and hERG K+ channel function in the human mammary carcinoma cell line MCF-7. Oncol Rep 19: 1511-1516. PubMed: 18497958.
-
(2008)
Oncol Rep
, vol.19
, pp. 1511-1516
-
-
Roy, J.1
Vantol, B.2
Cowley, E.A.3
Blay, J.4
Linsdell, P.5
-
25
-
-
77953720204
-
Systems pharmacology of arrhythmias
-
Berger SI, Ma. ayan A, Iyengar R (2010) Systems pharmacology of arrhythmias. Sci Signal 3: 30.
-
(2010)
Sci Signal
, vol.3
, pp. 30
-
-
Berger, S.I.1
-
26
-
-
83055198527
-
hERGCentral: a large database to store, retrieve, and analyze compound-human Ether-a-go-go related gene channel interactions to facilitate cardiotoxicity assessment in drug development
-
doi:10.1089/adt.2011.0425
-
Du F, Yu H, Zou B, Babcock J, Long S, et al. (2011) hERGCentral: a large database to store, retrieve, and analyze compound-human Ether-a-go-go related gene channel interactions to facilitate cardiotoxicity assessment in drug development. Assay Drug Dev Technol 9: 580-588. doi:10.1089/adt.2011.0425. PubMed: 22149888.
-
(2011)
Assay Drug Dev Technol
, vol.9
, pp. 580-588
-
-
Du, F.1
Yu, H.2
Zou, B.3
Babcock, J.4
Long, S.5
-
27
-
-
78049449443
-
Drug-Induced Regulation of Target Expression
-
Iskar M, Campillos M, Kuhn M, Jensen LJ, van Noort V, et al. (2010) Drug-Induced Regulation of Target Expression. PLOS Comput Biol 6: e1000925.
-
(2010)
PLOS Comput Biol
, vol.6
-
-
Iskar, M.1
Campillos, M.2
Kuhn, M.3
Jensen, L.J.4
van Noort, V.5
-
28
-
-
33847172327
-
Clustering by passing messages between data points
-
doi:10.1126/science.1136800
-
Frey BJ, Dueck D, (2007) Clustering by passing messages between data points. Science 315: 972-976. doi:10.1126/science.1136800. PubMed: 17218491.
-
(2007)
Science
, vol.315
, pp. 972-976
-
-
Frey, B.J.1
Dueck, D.2
-
29
-
-
0344492207
-
Relationships between preclinical cardiac electrophysiology, clinical QT interval prolongation and torsade de pointes for a broad range of drugs: evidence for a provisional safety margin in drug development
-
doi:10.1016/S0008-6363(02)00846-5
-
Redfern WS, Carlsson L, Davis AS, Lynch WG, MacKenzie I, et al. (2003) Relationships between preclinical cardiac electrophysiology, clinical QT interval prolongation and torsade de pointes for a broad range of drugs: evidence for a provisional safety margin in drug development. Cardiovasc Res 58: 32-45. doi:10.1016/S0008-6363(02)00846-5. PubMed: 12667944.
-
(2003)
Cardiovasc Res
, vol.58
, pp. 32-45
-
-
Redfern, W.S.1
Carlsson, L.2
Davis, A.S.3
Lynch, W.G.4
MacKenzie, I.5
-
30
-
-
68749083601
-
A framework to assess the translation of safety pharmacology data to humans
-
doi:10.1016/j.vascn.2009.05.011
-
Valentin JP, Bialecki R, Ewart L, Hammond T, Leishmann D, et al. (2009) A framework to assess the translation of safety pharmacology data to humans. J Pharmacol Toxicol Methods 60: 152-158. doi:10.1016/j.vascn.2009.05.011. PubMed: 19616110.
-
(2009)
J Pharmacol Toxicol Methods
, vol.60
, pp. 152-158
-
-
Valentin, J.P.1
Bialecki, R.2
Ewart, L.3
Hammond, T.4
Leishmann, D.5
-
31
-
-
0034812621
-
Interactions of the antimalarial drug mefloquine with the human cardiac potassium channels KvLQT1/minK and HERG
-
doi:11561091
-
Kang J, Chen XL, Wang L, Rampe D, (2001) Interactions of the antimalarial drug mefloquine with the human cardiac potassium channels KvLQT1/minK and HERG. J Pharmacol Exp Ther 299: 290-296. PubMed: 11561091.
-
(2001)
J Pharmacol Exp Ther
, vol.299
, pp. 290-296
-
-
Kang, J.1
Chen, X.L.2
Wang, L.3
Rampe, D.4
-
32
-
-
17144420547
-
Blockade of HERG cardiac K+ current by antifungal drug miconazole
-
doi:10.1038/sj.bjp.0706095
-
Kikuchi K, Nagatomo T, Abe H, Kawakami K, Duff HJ, et al. (2005) Blockade of HERG cardiac K+ current by antifungal drug miconazole. Br J Pharmacol 144: 840-848. doi:10.1038/sj.bjp.0706095. PubMed: 15778703.
-
(2005)
Br J Pharmacol
, vol.144
, pp. 840-848
-
-
Kikuchi, K.1
Nagatomo, T.2
Abe, H.3
Kawakami, K.4
Duff, H.J.5
-
33
-
-
79955419099
-
Simulation of multiple ion channel block provides improved early prediction of compounds' clinical torsadogenic risk
-
doi:10.1093/cvr/cvr044
-
Mirams GR, Cui Y, Sher A, Fink M, Cooper J, et al. (2011) Simulation of multiple ion channel block provides improved early prediction of compounds' clinical torsadogenic risk. Cardiovasc Res 91: 53-61. doi:10.1093/cvr/cvr044. PubMed: 21300721.
-
(2011)
Cardiovasc Res
, vol.91
, pp. 53-61
-
-
Mirams, G.R.1
Cui, Y.2
Sher, A.3
Fink, M.4
Cooper, J.5
-
34
-
-
84859475171
-
An in silico canine cardiac midmyocardial action potential duration model as a tool for early drug safety assessment
-
doi:10.1152/ajpheart.00808.2011
-
Davies MR, Mistry HB, Hussein L, Pollard CE, Valentin JP, et al. (2012) An in silico canine cardiac midmyocardial action potential duration model as a tool for early drug safety assessment. Am J Physiol Heart Circ Physiol 302: H1466-H1480. doi:10.1152/ajpheart.00808.2011. PubMed: 22198175.
-
(2012)
Am J Physiol Heart Circ Physiol
, vol.302
-
-
Davies, M.R.1
Mistry, H.B.2
Hussein, L.3
Pollard, C.E.4
Valentin, J.P.5
-
35
-
-
66749174141
-
A primate-specific, brain isoform of KCNH2 affects cortical physiology, cognition, neuronal repolarization and risk of schizophrenia
-
doi:10.1038/nm.1962
-
Huffaker SJ, Chen J, Nicodemus KK, Sambataro F, Yang F, et al. (2009) A primate-specific, brain isoform of KCNH2 affects cortical physiology, cognition, neuronal repolarization and risk of schizophrenia. Nat Med 15: 509-518. doi:10.1038/nm.1962. PubMed: 19412172.
-
(2009)
Nat Med
, vol.15
, pp. 509-518
-
-
Huffaker, S.J.1
Chen, J.2
Nicodemus, K.K.3
Sambataro, F.4
Yang, F.5
-
36
-
-
0035895887
-
HERG K+ channels activation during beta(1) integrin-mediated adhesion to fibronectin induces an up-regulation of alpha(v)beta(3) integrin in the preosteoclastic leukemia cell line FLG
-
4923-4931
-
Hofmann G, Bernabei PA, Crociani O, Cherubini A, Guasti L, et al. (2001) HERG K+ channels activation during beta(1) integrin-mediated adhesion to fibronectin induces an up-regulation of alpha(v)beta(3) integrin in the preosteoclastic leukemia cell line FLG. J Biol Chem 29. 1: 276: 4923-4931.
-
(2001)
J Biol Chem 29
, vol.1
, pp. 276
-
-
Hofmann, G.1
Bernabei, P.A.2
Crociani, O.3
Cherubini, A.4
Guasti, L.5
-
37
-
-
0036039326
-
The significance of QT interval in drug development
-
doi:10.1046/j.1365-2125.2002.01627.x
-
Shah RR, (2002) The significance of QT interval in drug development. Br J Clin Pharmacol 54: 188-202. doi:10.1046/j.1365-2125.2002.01627.x. PubMed: 12207642.
-
(2002)
Br J Clin Pharmacol
, vol.54
, pp. 188-202
-
-
Shah, R.R.1
-
38
-
-
84862192766
-
ChEMBL: a large-scale bioactivity database for drug discovery
-
doi:10.1093/nar/gkr777
-
Gaulton A, Bellis LJ, Bento AP, Chambers J, Davies M, et al. (2012) ChEMBL: a large-scale bioactivity database for drug discovery. Nucleic Acids Res 40: D1100-D1107. doi:10.1093/nar/gkr777. PubMed: 21948594.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Gaulton, A.1
Bellis, L.J.2
Bento, A.P.3
Chambers, J.4
Davies, M.5
-
39
-
-
2142773127
-
Potent inhibition of human cardiac potassium (HERG) channels by the anti-estrogen agent clomiphene-without QT interval prolongation
-
doi:10.1016/j.bbrc.2004.04.063
-
Yuill KH, Borg JJ, Ridley JM, Milnes JT, Witchel HJ, et al. (2004) Potent inhibition of human cardiac potassium (HERG) channels by the anti-estrogen agent clomiphene-without QT interval prolongation. Biochem Biophys Res Commun 318: 556-561. doi:10.1016/j.bbrc.2004.04.063. PubMed: 15120636.
-
(2004)
Biochem Biophys Res Commun
, vol.318
, pp. 556-561
-
-
Yuill, K.H.1
Borg, J.J.2
Ridley, J.M.3
Milnes, J.T.4
Witchel, H.J.5
-
40
-
-
0031982513
-
Properties of HERG channels stably expressed in HEK 293 cells studied at physiological temperature
-
doi:10.1016/S0006-3495(98)77782-3
-
Zhou ZF, Gong QM, Ye B, Fan Z, Makielski JC, et al. (1998) Properties of HERG channels stably expressed in HEK 293 cells studied at physiological temperature. Biophys J 74: 230-241. doi:10.1016/S0006-3495(98)77782-3. PubMed: 9449325.
-
(1998)
Biophys J
, vol.74
, pp. 230-241
-
-
Zhou, Z.F.1
Gong, Q.M.2
Ye, B.3
Fan, Z.4
Makielski, J.C.5
-
41
-
-
0001686632
-
Endogenous voltage-gated potassium channels in human embryonic kidney (HEK293) cells
-
doi:10.1002/(SICI)1097-4547(19980601)52:5
-
Yu SP, Kerchner GA, (1998) Endogenous voltage-gated potassium channels in human embryonic kidney (HEK293) cells. J Neurosci Res 52: 612-617. doi:10.1002/(SICI)1097-4547(19980601)52:5. PubMed: 9632317.
-
(1998)
J Neurosci Res
, vol.52
, pp. 612-617
-
-
Yu, S.P.1
Kerchner, G.A.2
-
42
-
-
17344373426
-
Characterization of a hERG screen using the IonWorks HT: Comparison to a hERG rubidium efflux screen
-
doi:10.1089/adt.2005.3.47
-
Sorota S, Zhang XS, Margulis M, Tucker K, Priestley T, (2005) Characterization of a hERG screen using the IonWorks HT: Comparison to a hERG rubidium efflux screen. Assay Drug Dev Technol 3: 47-57. doi:10.1089/adt.2005.3.47. PubMed: 15798395.
-
(2005)
Assay Drug Dev Technol
, vol.3
, pp. 47-57
-
-
Sorota, S.1
Zhang, X.S.2
Margulis, M.3
Tucker, K.4
Priestley, T.5
-
43
-
-
78650483557
-
Comparison of human Ether-a-go-go related gene screening assays based on IonWorks Quattro and thallium flux
-
doi:10.1089/adt.2010.0267
-
Bridal TR, Margulis M, Wang X, Donio M, Sorota S, (2010) Comparison of human Ether-a-go-go related gene screening assays based on IonWorks Quattro and thallium flux. Assay Drug Dev Technol 8: 755-765. doi:10.1089/adt.2010.0267. PubMed: 20658944.
-
(2010)
Assay Drug Dev Technol
, vol.8
, pp. 755-765
-
-
Bridal, T.R.1
Margulis, M.2
Wang, X.3
Donio, M.4
Sorota, S.5
-
44
-
-
33748943301
-
Non-conducting functions of voltage-gated ion channels
-
doi:10.1038/nrn1988
-
Kaczmarek LK, (2006) Non-conducting functions of voltage-gated ion channels. Nat Rev Neurosci 7: 761-771. doi:10.1038/nrn1988. PubMed: 16988652.
-
(2006)
Nat Rev Neurosci
, vol.7
, pp. 761-771
-
-
Kaczmarek, L.K.1
-
45
-
-
33750433556
-
The C terminus of the L-type voltage-gated calcium channel Ca(V)1.2 encodes a transcription factor
-
doi:10.1016/j.cell.2006.10.017
-
Gomez-Ospina N, Tsuruta F, Barreto-Chang O, Hu L, Dolmetsch R, (2006) The C terminus of the L-type voltage-gated calcium channel Ca(V)1.2 encodes a transcription factor. Cell 127: 591-606. doi:10.1016/j.cell.2006.10.017. PubMed: 17081980.
-
(2006)
Cell
, vol.127
, pp. 591-606
-
-
Gomez-Ospina, N.1
Tsuruta, F.2
Barreto-Chang, O.3
Hu, L.4
Dolmetsch, R.5
-
46
-
-
33644551196
-
A voltage-driven switch for ion-independent signaling by ether-a-go-go K+ channels
-
doi:10.1073/pnas.0505909103
-
Hegle AP, Marble DD, Wilson GF, (2006) A voltage-driven switch for ion-independent signaling by ether-a-go-go K+ channels. Proc Natl Acad Sci U S A 103: 2886-2891. doi:10.1073/pnas.0505909103. PubMed: 16477030.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 2886-2891
-
-
Hegle, A.P.1
Marble, D.D.2
Wilson, G.F.3
-
47
-
-
84864705133
-
QSAR Modeling and Data Mining Link Torsades de Pointes Risk to the Interplay of Extent of Metabolism, Active Transport, and hERG Liability
-
Broccatelli F, Mannhold R, Moriconi A, Giuli S, Carosati E, (2012) QSAR Modeling and Data Mining Link Torsades de Pointes Risk to the Interplay of Extent of Metabolism, Active Transport, and hERG Liability. Mol Pharm 9: 2290-2301.
-
(2012)
Mol Pharm
, vol.9
, pp. 2290-2301
-
-
Broccatelli, F.1
Mannhold, R.2
Moriconi, A.3
Giuli, S.4
Carosati, E.5
-
48
-
-
84865098860
-
Voltage-gated potassium channel EAG2 controls mitotic entry and tumor growth in medulloblastoma via regulating cell volume dynamics
-
doi:10.1101/gad.193789.112
-
Huang X, Dubuc AM, Hashizume R, Berg J, He Y, et al. (2012) Voltage-gated potassium channel EAG2 controls mitotic entry and tumor growth in medulloblastoma via regulating cell volume dynamics. Genes Dev 26: 1780-1796. doi:10.1101/gad.193789.112. PubMed: 22855790.
-
(2012)
Genes Dev
, vol.26
, pp. 1780-1796
-
-
Huang, X.1
Dubuc, A.M.2
Hashizume, R.3
Berg, J.4
He, Y.5
-
49
-
-
67649100479
-
Functional assessment of time course microarray data
-
doi:10.1186/1471-2105-10-S1-S9
-
Nueda MJ, Sebastian P, Tarazona S, Garcia-Garcia F, Dopazo J, et al. (2009) Functional assessment of time course microarray data. BMC Bioinformatics 10 (Suppl 6):: S9. doi:10.1186/1471-2105-10-S1-S9.
-
(2009)
BMC Bioinformatics
, vol.10
, Issue.SUPPL. 6
-
-
Nueda, M.J.1
Sebastian, P.2
Tarazona, S.3
Garcia-Garcia, F.4
Dopazo, J.5
-
50
-
-
30344486684
-
Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium
-
doi:10.1093/bioinformatics/bti737
-
Tan Y, Shi L, Hussain SM, Xu J, Tong W, et al. (2006) Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium. Bioinformatics 22: 77-87. doi:10.1093/bioinformatics/bti737. PubMed: 16249259.
-
(2006)
Bioinformatics
, vol.22
, pp. 77-87
-
-
Tan, Y.1
Shi, L.2
Hussain, S.M.3
Xu, J.4
Tong, W.5
-
51
-
-
33646076705
-
Effect of the difference in vehicles on gene expression in the rat liver--analysis of the control data in the Toxicogenomics Project Database
-
doi:10.1016/j.lfs.2005.11.010
-
Takashima K, Mizukawa Y, Morishita K, Okuyama M, Kasahara T, et al. (2006) Effect of the difference in vehicles on gene expression in the rat liver--analysis of the control data in the Toxicogenomics Project Database. Life Sci 78: 2787-2796. doi:10.1016/j.lfs.2005.11.010. PubMed: 16360708.
-
(2006)
Life Sci
, vol.78
, pp. 2787-2796
-
-
Takashima, K.1
Mizukawa, Y.2
Morishita, K.3
Okuyama, M.4
Kasahara, T.5
-
52
-
-
77951675415
-
Prospective validation of a comprehensive in silico hERG model and its applications to commercial compound and drug databases
-
doi:10.1002/cmdc.201000024
-
Doddareddy MR, Klaasse EC, Shagufta, Ijzerman AP, Bender A, (2010) Prospective validation of a comprehensive in silico hERG model and its applications to commercial compound and drug databases. Chemmedchem 5: 716-729. doi:10.1002/cmdc.201000024. PubMed: 20349498.
-
(2010)
Chemmedchem
, vol.5
, pp. 716-729
-
-
Doddareddy, M.R.1
Klaasse, E.C.2
Shagufta3
Ijzerman, A.P.4
Bender, A.5
-
53
-
-
39749088786
-
hERG classification model based on a combination of support vector machine method and GRIND descriptors
-
doi:10.1021/mp700124e
-
Li Q, Jorgensen FS, Oprea T, Brunak S, Taboureau O, (2008) hERG classification model based on a combination of support vector machine method and GRIND descriptors. Mol Pharm 5: 117-127. doi:10.1021/mp700124e. PubMed: 18197627.
-
(2008)
Mol Pharm
, vol.5
, pp. 117-127
-
-
Li, Q.1
Jorgensen, F.S.2
Oprea, T.3
Brunak, S.4
Taboureau, O.5
-
54
-
-
77953229292
-
Multiple mechanisms of hERG liability: K+ current inhibition, disruption of protein trafficking, and apoptosis induced by amoxapine
-
doi:10.1007/s00210-010-0496-7
-
Obers S, Staudacher I, Ficker E, Dennis A, Koschny R, et al. (2010) Multiple mechanisms of hERG liability: K+ current inhibition, disruption of protein trafficking, and apoptosis induced by amoxapine. Naunyn Schmiedebergs Arch Pharmacol 381: 385-400. doi:10.1007/s00210-010-0496-7. PubMed: 20229012.
-
(2010)
Naunyn Schmiedebergs Arch Pharmacol
, vol.381
, pp. 385-400
-
-
Obers, S.1
Staudacher, I.2
Ficker, E.3
Dennis, A.4
Koschny, R.5
-
55
-
-
34548036519
-
VEGFR-1 (FLT-1), beta1 integrin, and hERG K+ channel for a macromolecular signaling complex in acute myeloid leukemia: role in cell migration and clinical outcome
-
doi:10.1182/blood-2006-02-003772
-
Pillozzi S, Brizzi MF, Bernabei PA, Bartolozzi B, Caporale R, et al. (2007) VEGFR-1 (FLT-1), beta1 integrin, and hERG K+ channel for a macromolecular signaling complex in acute myeloid leukemia: role in cell migration and clinical outcome. Blood 110: 1238-1250. doi:10.1182/blood-2006-02-003772. PubMed: 17420287.
-
(2007)
Blood
, vol.110
, pp. 1238-1250
-
-
Pillozzi, S.1
Brizzi, M.F.2
Bernabei, P.A.3
Bartolozzi, B.4
Caporale, R.5
-
56
-
-
84863915312
-
Modulation of hERG potassium channel gating normalizes action potential duration prolonged by dysfunctional KCNQ1 potassium channel
-
doi:10.1073/pnas.1205266109
-
Zhang H, Zou B, Yu H, Moretti A, Wang X, et al. (2012) Modulation of hERG potassium channel gating normalizes action potential duration prolonged by dysfunctional KCNQ1 potassium channel. Proc Natl Acad Sci U S A 109: 11866-11871. doi:10.1073/pnas.1205266109. PubMed: 22745159.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 11866-11871
-
-
Zhang, H.1
Zou, B.2
Yu, H.3
Moretti, A.4
Wang, X.5
-
57
-
-
84861993799
-
Combined deep microRNA and mRNA sequencing identifies protective transcriptomal signature of enhanced PI3Kalpha signaling in cardiac hypertrophy
-
doi:10.1016/j.yjmcc.2012.04.012
-
Yang KC, Ku YC, Lovett M, Nerbonne JM, (2012) Combined deep microRNA and mRNA sequencing identifies protective transcriptomal signature of enhanced PI3Kalpha signaling in cardiac hypertrophy. J Mol Cell Cardiol 53: 101-112. doi:10.1016/j.yjmcc.2012.04.012. PubMed: 22580345.
-
(2012)
J Mol Cell Cardiol
, vol.53
, pp. 101-112
-
-
Yang, K.C.1
Ku, Y.C.2
Lovett, M.3
Nerbonne, J.M.4
-
58
-
-
84859879034
-
Deep RNA sequencing reveals novel cardiac transcriptomic signatures for physiological and pathological hypertrophy
-
doi:10.1371/journal.pone.0035552
-
Song HK, Hong SE, Kim T, Kim do H, (2012) Deep RNA sequencing reveals novel cardiac transcriptomic signatures for physiological and pathological hypertrophy. PLOS ONE 7: e35552. doi:10.1371/journal.pone.0035552. PubMed: 22523601.
-
(2012)
PLOS ONE
, vol.7
-
-
Song, H.K.1
Hong, S.E.2
Kim, T.3
Kim do, H.4
-
59
-
-
84866430390
-
Global microRNA profiling of the mouse ventricles during development of severe hypertrophic cardiomyopathy and heart failure
-
doi:10.1371/journal.pone.0044744
-
Bagnall RD, Tsoutsman T, Shephard RE, Ritchie W, Semsarian C, (2012) Global microRNA profiling of the mouse ventricles during development of severe hypertrophic cardiomyopathy and heart failure. PLOS ONE 7: e44744. doi:10.1371/journal.pone.0044744. PubMed: 23024758.
-
(2012)
PLOS ONE
, vol.7
-
-
Bagnall, R.D.1
Tsoutsman, T.2
Shephard, R.E.3
Ritchie, W.4
Semsarian, C.5
-
60
-
-
0025066941
-
More powerful procedures for multiple significance testing
-
doi:10.1002/sim.4780090710
-
Hochberg Y, Benjamini Y, (1990) More powerful procedures for multiple significance testing. Stat Med 9: 811-818. doi:10.1002/sim.4780090710. PubMed: 2218183.
-
(1990)
Stat Med
, vol.9
, pp. 811-818
-
-
Hochberg, Y.1
Benjamini, Y.2
-
61
-
-
84863376218
-
Versatile pathway-centric approach based on high-throughput sequencing to anticancer drug discovery
-
doi:10.1073/pnas.1200305109
-
Li H, Zhou H, Wang D, Qiu J, Zhou Y, et al. (2012) Versatile pathway-centric approach based on high-throughput sequencing to anticancer drug discovery. Proc Natl Acad Sci U S A 109: 4609-4614. doi:10.1073/pnas.1200305109. PubMed: 22396588.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 4609-4614
-
-
Li, H.1
Zhou, H.2
Wang, D.3
Qiu, J.4
Zhou, Y.5
-
62
-
-
67649711869
-
aroma.affymetrix: A generic framework in R for analyzing small to very large Affymetrix data sets in bounded memory
-
Bengtsson H, Simpson K, Bullard J, Hansen K, (2008) aroma.affymetrix: A generic framework in R for analyzing small to very large Affymetrix data sets in bounded memory.
-
(2008)
-
-
Bengtsson, H.1
Simpson, K.2
Bullard, J.3
Hansen, K.4
-
63
-
-
10844290766
-
A model-based background adjustment for oligonucleotide expression arrays
-
doi:10.1198/016214504000000683
-
Wu ZJ, Irizarry RA, Gentleman R, Martinez-Murillo F, Spencer F, (2004) A model-based background adjustment for oligonucleotide expression arrays. J Am Stat Assoc 99: 909-917. doi:10.1198/016214504000000683.
-
(2004)
J Am Stat Assoc
, vol.99
, pp. 909-917
-
-
Wu, Z.J.1
Irizarry, R.A.2
Gentleman, R.3
Martinez-Murillo, F.4
Spencer, F.5
-
64
-
-
84863304598
-
R: A Language and Environment for Statistical Computing
-
R Development Core Team (2012) R: A Language and Environment for Statistical Computing.
-
(2012)
-
-
-
65
-
-
77958040999
-
Constructing a compound mode-of-action network for personalized drug effectiveness prediction
-
Niagara Falls, New York: ACM. 520-528, Niagara Falls, New York, Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology
-
Ma C, Chen H-IH, Huang Y, Chen Y, (2010) Constructing a compound mode-of-action network for personalized drug effectiveness prediction. Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology. Niagara Falls, New York: ACM. 520-528.
-
(2010)
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology
, pp. 520-528
-
-
Ma, C.1
Chen, H.-I.H.2
Huang, Y.3
Chen, Y.4
-
66
-
-
84155170296
-
topGO: topGO: Enrichment analysis for Gene Ontology
-
Alexa A, Rahnenfuhrer J, (2010) topGO: topGO: Enrichment analysis for Gene Ontology.
-
(2010)
-
-
Alexa, A.1
Rahnenfuhrer, J.2
|