메뉴 건너뛰기




Volumn 11, Issue SUPPL.1, 2013, Pages 224-232

Systems biology of coagulation

Author keywords

Computer; Convection; Platelet; Simulation; Thrombin; Thrombosis

Indexed keywords

ANTIPLASMIN; FIBRINOGEN; KAOLIN; PHOSPHOLIPASE D; PLASMINOGEN ACTIVATOR INHIBITOR 1; POLYPHOSPHATE; PROTEIN KINASE B; PROTEIN KINASE C; PROTHROMBIN; SULFATE; THROMBIN; TISSUE PLASMINOGEN ACTIVATOR; VON WILLEBRAND FACTOR;

EID: 84880615423     PISSN: 15387933     EISSN: 15387836     Source Type: Journal    
DOI: 10.1111/jth.12220     Document Type: Review
Times cited : (47)

References (35)
  • 1
    • 0021278877 scopus 로고
    • "Clotspeed", a mathematical simulation of the functional properties of prothrombinase
    • Nesheim ME, Tracy RP, Mann KG. "Clotspeed", a mathematical simulation of the functional properties of prothrombinase. J Biol Chem 1984; 259: 1447-53.
    • (1984) J Biol Chem , vol.259 , pp. 1447-1453
    • Nesheim, M.E.1    Tracy, R.P.2    Mann, K.G.3
  • 2
    • 0037166290 scopus 로고    scopus 로고
    • A model for the stoichiometric regulation of blood coagulation
    • Hockin MF, Jones KC, Everse SJ, Mann KG. A model for the stoichiometric regulation of blood coagulation. J Biol Chem 2002; 277: 18322-33.
    • (2002) J Biol Chem , vol.277 , pp. 18322-18333
    • Hockin, M.F.1    Jones, K.C.2    Everse, S.J.3    Mann, K.G.4
  • 4
    • 84865245193 scopus 로고    scopus 로고
    • Is there value in kinetic modeling of thrombin generation? Yes
    • Mann KG. Is there value in kinetic modeling of thrombin generation? Yes. J Thromb Haemost 2012; 10: 1463-9.
    • (2012) J Thromb Haemost , vol.10 , pp. 1463-1469
    • Mann, K.G.1
  • 5
    • 84865222041 scopus 로고    scopus 로고
    • Is there value in kinetic modeling of thrombin generation? No (unless...)
    • Hemker HC, Kerdelo S, Kremers RM. Is there value in kinetic modeling of thrombin generation? No (unless...). J Thromb Haemost 2012; 10: 1470-7.
    • (2012) J Thromb Haemost , vol.10 , pp. 1470-1477
    • Hemker, H.C.1    Kerdelo, S.2    Kremers, R.M.3
  • 7
    • 78049416033 scopus 로고    scopus 로고
    • Systems biology of coagulation initiation: kinetics of thrombin generation in resting and activated human blood
    • Chatterjee MS, Denney WS, Jing H, Diamond SL. Systems biology of coagulation initiation: kinetics of thrombin generation in resting and activated human blood. PLoS Comput Biol 2010;6:e1000950.
    • (2010) PLoS Comput Biol , vol.6
    • Chatterjee, M.S.1    Denney, W.S.2    Jing, H.3    Diamond, S.L.4
  • 8
    • 1342312137 scopus 로고    scopus 로고
    • A mathematical model of lipid-mediated thrombin generation
    • Bungay SD, Gentry PA, Gentry RD. A mathematical model of lipid-mediated thrombin generation. Math Med Biol 2003; 20: 105-29.
    • (2003) Math Med Biol , vol.20 , pp. 105-129
    • Bungay, S.D.1    Gentry, P.A.2    Gentry, R.D.3
  • 10
    • 84861529620 scopus 로고    scopus 로고
    • Thrombus growth and embolism on tissue factor-bearing collagen surfaces under flow: role of thrombin with and without fibrin
    • Colace TV, Muthard RW, Diamond SL. Thrombus growth and embolism on tissue factor-bearing collagen surfaces under flow: role of thrombin with and without fibrin. Arterioscler Thromb Vasc Biol 2012; 32: 1466-76.
    • (2012) Arterioscler Thromb Vasc Biol , vol.32 , pp. 1466-1476
    • Colace, T.V.1    Muthard, R.W.2    Diamond, S.L.3
  • 11
    • 0026771894 scopus 로고
    • Computer modeling of fibrin polymerization kinetics correlated with electron microscope and turbidity observations: clot structure and assembly are kinetically controlled
    • Weisel JW, Nagaswami C. Computer modeling of fibrin polymerization kinetics correlated with electron microscope and turbidity observations: clot structure and assembly are kinetically controlled. Biophys J 1992; 63: 111-28.
    • (1992) Biophys J , vol.63 , pp. 111-128
    • Weisel, J.W.1    Nagaswami, C.2
  • 13
    • 0029763116 scopus 로고    scopus 로고
    • Computer simulation of systemic circulation and clot lysis dynamics during thrombolytic therapy that accounts for inner clot transport and reaction
    • Anand S, Diamond SL. Computer simulation of systemic circulation and clot lysis dynamics during thrombolytic therapy that accounts for inner clot transport and reaction. Circulation 1996; 94: 763-74.
    • (1996) Circulation , vol.94 , pp. 763-774
    • Anand, S.1    Diamond, S.L.2
  • 14
    • 0033302248 scopus 로고    scopus 로고
    • Engineering design of optimal strategies for blood clot dissolution
    • Diamond SL. Engineering design of optimal strategies for blood clot dissolution. Annu Rev Biomed Eng 1999; 1: 427-62.
    • (1999) Annu Rev Biomed Eng , vol.1 , pp. 427-462
    • Diamond, S.L.1
  • 15
    • 0037083201 scopus 로고    scopus 로고
    • An experimental and theoretical study on the dissolution of mural fibrin clots by tissue-type plasminogen activator
    • Wootton DM, Popel AS, Alevriadou BR. An experimental and theoretical study on the dissolution of mural fibrin clots by tissue-type plasminogen activator. Biotechnol Bioeng 2002; 77: 405-19.
    • (2002) Biotechnol Bioeng , vol.77 , pp. 405-419
    • Wootton, D.M.1    Popel, A.S.2    Alevriadou, B.R.3
  • 16
    • 84880638977 scopus 로고    scopus 로고
    • Modelling fibrinolysis: a 3D stochastic multiscale model
    • Epub ahead of print.
    • Bannish BE, Keener JP, Fogelson AL. Modelling fibrinolysis: a 3D stochastic multiscale model. Math Med Biol 2012; 4. Epub ahead of print.
    • (2012) Math Med Biol , vol.4
    • Bannish, B.E.1    Keener, J.P.2    Fogelson, A.L.3
  • 17
    • 58149156729 scopus 로고    scopus 로고
    • A molecular signaling model of platelet phosphoinositide and calcium regulation during homeostasis and P2Y1 activation
    • Purvis JE, Chatterjee MS, Brass LF, Diamond SL. A molecular signaling model of platelet phosphoinositide and calcium regulation during homeostasis and P2Y1 activation. Blood 2008; 112: 4069-79.
    • (2008) Blood , vol.112 , pp. 4069-4079
    • Purvis, J.E.1    Chatterjee, M.S.2    Brass, L.F.3    Diamond, S.L.4
  • 18
    • 63549117062 scopus 로고    scopus 로고
    • Steady-state kinetic modeling constrains cellular resting states and dynamic behavior
    • Purvis JE, Radhakrishnan R, Diamond SL. Steady-state kinetic modeling constrains cellular resting states and dynamic behavior. PLoS Comput Biol 2009; 5: e1000298.
    • (2009) PLoS Comput Biol , vol.5
    • Purvis, J.E.1    Radhakrishnan, R.2    Diamond, S.L.3
  • 20
    • 0032818672 scopus 로고    scopus 로고
    • Monte Carlo simulation of the heterotypic aggregation kinetics of platelets and neutrophils
    • Laurenzi IJ, Diamond SL. Monte Carlo simulation of the heterotypic aggregation kinetics of platelets and neutrophils. Biophys J 1999; 77: 1733-46.
    • (1999) Biophys J , vol.77 , pp. 1733-1746
    • Laurenzi, I.J.1    Diamond, S.L.2
  • 21
    • 79551642552 scopus 로고    scopus 로고
    • Simulation of aggregating particles in complex flows by the lattice kinetic Monte Carlo method
    • Flamm MH, Sinno T, Diamond SL. Simulation of aggregating particles in complex flows by the lattice kinetic Monte Carlo method. J Chem Phys 2011; 134: 034905.
    • (2011) J Chem Phys , vol.134 , pp. 034905
    • Flamm, M.H.1    Sinno, T.2    Diamond, S.L.3
  • 24
    • 77954522738 scopus 로고    scopus 로고
    • Pairwise agonist scanning predicts cellular signaling responses to combinatorial stimuli
    • Chatterjee MS, Purvis JE, Brass LF, Diamond SL. Pairwise agonist scanning predicts cellular signaling responses to combinatorial stimuli. Nat Biotechnol 2010; 28: 727-32.
    • (2010) Nat Biotechnol , vol.28 , pp. 727-732
    • Chatterjee, M.S.1    Purvis, J.E.2    Brass, L.F.3    Diamond, S.L.4
  • 25
    • 0035119193 scopus 로고    scopus 로고
    • Surface-mediated control of blood coagulation: the role of binding site densities and platelet deposition
    • Kuharsky AL, Fogelson AL. Surface-mediated control of blood coagulation: the role of binding site densities and platelet deposition. Biophys J 2001; 80: 1050-74.
    • (2001) Biophys J , vol.80 , pp. 1050-1074
    • Kuharsky, A.L.1    Fogelson, A.L.2
  • 26
    • 43549100702 scopus 로고    scopus 로고
    • Determination of surface tissue factor thresholds that trigger coagulation at venous and arterial shear rates: amplification of 100 fM circulating tissue factor requires flow
    • Okorie UM, Denney WS, Chatterjee MS, Neeves KB, Diamond SL. Determination of surface tissue factor thresholds that trigger coagulation at venous and arterial shear rates: amplification of 100 fM circulating tissue factor requires flow. Blood 2008; 111: 3507-13.
    • (2008) Blood , vol.111 , pp. 3507-3513
    • Okorie, U.M.1    Denney, W.S.2    Chatterjee, M.S.3    Neeves, K.B.4    Diamond, S.L.5
  • 27
    • 79952603824 scopus 로고    scopus 로고
    • Grow with the flow: a spatial-temporal model of platelet deposition and blood coagulation under flow
    • Leiderman K, Fogelson AL. Grow with the flow: a spatial-temporal model of platelet deposition and blood coagulation under flow. Math Med Biol 2011; 28: 47-84.
    • (2011) Math Med Biol , vol.28 , pp. 47-84
    • Leiderman, K.1    Fogelson, A.L.2
  • 28
    • 84855464236 scopus 로고    scopus 로고
    • Blood clot formation under flow: the importance of factor XI depends strongly on platelet count
    • Fogelson AL, Hussain YH, Leiderman K. Blood clot formation under flow: the importance of factor XI depends strongly on platelet count. Biophys J 2012; 102: 10-18.
    • (2012) Biophys J , vol.102 , pp. 10-18
    • Fogelson, A.L.1    Hussain, Y.H.2    Leiderman, K.3
  • 29
    • 84868108253 scopus 로고    scopus 로고
    • Platelet-targeting sensor reveals thrombin gradients within blood clots forming in microfluidic assays and in mouse
    • Welsh JD, Colace TV, Muthard RW, Stalker TJ, Brass LF, Diamond SL. Platelet-targeting sensor reveals thrombin gradients within blood clots forming in microfluidic assays and in mouse. J Thromb Haemost 2012; 10: 2344-53.
    • (2012) J Thromb Haemost , vol.10 , pp. 2344-2353
    • Welsh, J.D.1    Colace, T.V.2    Muthard, R.W.3    Stalker, T.J.4    Brass, L.F.5    Diamond, S.L.6
  • 32
    • 68549086963 scopus 로고    scopus 로고
    • Simulation of thrombus formation in shear flows using Lattice Boltzmann Method
    • Tamagawa M, Kaneda H, Hiramoto M, Nagahama S. Simulation of thrombus formation in shear flows using Lattice Boltzmann Method. Artif Organs 2009; 33: 604-10.
    • (2009) Artif Organs , vol.33 , pp. 604-610
    • Tamagawa, M.1    Kaneda, H.2    Hiramoto, M.3    Nagahama, S.4
  • 34
    • 20844432399 scopus 로고    scopus 로고
    • Initiation and propagation of coagulation from tissue factor-bearing cell monolayers to plasma: initiator cells do not regulate spatial growth rate
    • Ovanesov MV, Ananyeva NM, Panteleev MA, Ataullakhanov FI, Saenko EL. Initiation and propagation of coagulation from tissue factor-bearing cell monolayers to plasma: initiator cells do not regulate spatial growth rate. J Thromb Haemost 2005; 3: 321-31.
    • (2005) J Thromb Haemost , vol.3 , pp. 321-331
    • Ovanesov, M.V.1    Ananyeva, N.M.2    Panteleev, M.A.3    Ataullakhanov, F.I.4    Saenko, E.L.5
  • 35
    • 33750481224 scopus 로고    scopus 로고
    • Modular chemical mechanism predicts spatiotemporal dynamics of initiation in the complex network of hemostasis
    • Kastrup CJ, Runyon MK, Shen F, Ismagilov RF. Modular chemical mechanism predicts spatiotemporal dynamics of initiation in the complex network of hemostasis. Proc Natl Acad Sci U S A 2006; 103: 15747-52.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 15747-15752
    • Kastrup, C.J.1    Runyon, M.K.2    Shen, F.3    Ismagilov, R.F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.