-
2
-
-
84880582220
-
-
www.nobelprize.org/nobel-prizes/chemistry/laureates/2003/ mackinnon-lecture.html
-
-
-
-
3
-
-
0031030225
-
Permeation through an open channel: Poisson-Nernst-Planck theory of a synthetic ionic channel
-
10.1016/S0006-3495(97)78650-8 0006-3495
-
Chen D, Lear J and Eisenberg R S 1997 Permeation through an open channel: poisson-Nernst-Planck theory of a synthetic ionic channel Biophys. J. 72 97-116
-
(1997)
Biophys. J.
, vol.72
, Issue.1
, pp. 97-116
-
-
Chen, D.1
Lear, J.2
Eisenberg, R.S.3
-
4
-
-
34548270391
-
Inverse problems related to ion channel selectivity
-
10.1137/060664689 0036-1399
-
Burger M, Eisenberg R S and Engl H W 2007 Inverse problems related to ion channel selectivity SIAM J. Appl. Math. 67 960-89
-
(2007)
SIAM J. Appl. Math.
, vol.67
, Issue.4
, pp. 960-989
-
-
Burger, M.1
Eisenberg, R.S.2
Engl, H.W.3
-
5
-
-
0032981778
-
Selectivity and permeation in calcium release channel of cardiac muscle: Alkali metal ions
-
10.1016/S0006-3495(99)77297-8 0006-3495
-
Chen D P, Xu L, Tripathy A, Meissner G and Eisenberg R S 1999 Selectivity and permeation in calcium release channel of cardiac muscle: alkali metal ions Biophys. J. 76 1346-66
-
(1999)
Biophys. J.
, vol.76
, Issue.3
, pp. 1346-1366
-
-
Chen, D.P.1
Xu, L.2
Tripathy, A.3
Meissner, G.4
Eisenberg, R.S.5
-
6
-
-
34548717678
-
Steric selectivity in Na channels crising from protein polarization and mobile side chains
-
10.1529/biophysj.107.105478 0006-3495
-
Boda D, Nonner W, Valisko M, Henderson D, Eisenberg R S and Gillespie D 2007 Steric selectivity in Na channels crising from protein polarization and mobile side chains Biophys. J. 93 1960-80
-
(2007)
Biophys. J.
, vol.93
, Issue.6
, pp. 1960-1980
-
-
Boda, D.1
Nonner, W.2
Valisko, M.3
Henderson, D.4
Eisenberg, R.S.5
Gillespie, D.6
-
7
-
-
0027157588
-
Charges, currents, and potentials in ionic channels of one conformation
-
10.1016/S0006-3495(93)81507-8 0006-3495
-
Eisenberg R S and Chen D 1993 Charges, currents, and potentials in ionic channels of one conformation Biophys. J. 64 1405-21
-
(1993)
Biophys. J.
, vol.64
, Issue.5
, pp. 1405-1421
-
-
Eisenberg, R.S.1
Chen, D.2
-
8
-
-
12344316628
-
Issues in modeling ion transport in biological channels: Self-consistent particle-based simulations
-
10.1023/B:JCEL.0000011431.17843.a6 1569-8025
-
Aboud, Saraniti S M and Eisenberg R S 2003 Issues in modeling ion transport in biological channels: self-consistent particle-based simulations J. Comput. Electron. 2 239-43
-
(2003)
J. Comput. Electron.
, vol.2
, Issue.2-4
, pp. 239-243
-
-
Aboud1
Saraniti, S.M.2
Eisenberg, R.S.3
-
9
-
-
0033884302
-
A grand canonical Monte Carlo - Brownian dynamics algorithm for simulating ion channels
-
10.1016/S0006-3495(00)76336-3 0006-3495
-
Im W, Seefeld S and Roux B 2000 A grand canonical Monte Carlo - Brownian dynamics algorithm for simulating ion channels Biophys. J. 79 788-801
-
(2000)
Biophys. J.
, vol.79
, Issue.2
, pp. 788-801
-
-
Im, W.1
Seefeld, S.2
Roux, B.3
-
10
-
-
1342344804
-
Comparison of dynamic lattice Monte Carlo simulations and the dielectric self-energy Poisson-Nernst-Planck continuum theory for model ion channels
-
10.1021/jp0355307 1520-6106 B
-
Graf P, Kurnikova M G, Coalson R D and Nitzan A 2004 Comparison of dynamic lattice Monte Carlo simulations and the dielectric self-energy Poisson-Nernst-Planck continuum theory for model ion channels J. Phys. Chem. B 108 2006-15
-
(2004)
J. Phys. Chem.
, vol.108
, Issue.6
, pp. 2006-2015
-
-
Graf, P.1
Kurnikova, M.G.2
Coalson, R.D.3
Nitzan, A.4
-
11
-
-
0024203547
-
Dendritic spines of rat cerebellar Purkinje cells: Serial electron microscopy with reference to their biophysical characteristics
-
Harris K M and Stevens J K 1988 Dendritic spines of rat cerebellar Purkinje cells: serial electron microscopy with reference to their biophysical characteristics J. Neurosci. 12 4455-69
-
(1988)
J. Neurosci.
, vol.12
, pp. 4455-4469
-
-
Harris, K.M.1
Stevens, J.K.2
-
12
-
-
43449117577
-
Balancing structure and function at hippocampal dendritic spines
-
10.1146/annurev.neuro.31.060407.125646 0147-006X
-
Bourne J N and Harris K M 2008 Balancing structure and function at hippocampal dendritic spines Annu. Rev. Neurosci. 31 47-67
-
(2008)
Annu. Rev. Neurosci.
, vol.31
, Issue.1
, pp. 47-67
-
-
Bourne, J.N.1
Harris, K.M.2
-
13
-
-
9644260584
-
Dynamic regulation of spine-dendrite coupling in cultured hippocampal neurons
-
10.1111/j.1460-9568.2004.03691.x 0953-816X
-
Korkotian E, Holcman D and Segal M 2004 Dynamic regulation of spine-dendrite coupling in cultured hippocampal neurons Euro. J. Neurosci. 20 2649-63
-
(2004)
Euro. J. Neurosci.
, vol.20
, Issue.10
, pp. 2649-2663
-
-
Korkotian, E.1
Holcman, D.2
Segal, M.3
-
14
-
-
77952334420
-
Actin in dendritic spines: Connecting dynamics to function
-
10.1083/jcb.201003008 0021-9525
-
Hotulainen P and Hoogenraad C C 2010 Actin in dendritic spines: connecting dynamics to function J. Cell Biol. 189 619-29
-
(2010)
J. Cell Biol.
, vol.189
, Issue.4
, pp. 619-629
-
-
Hotulainen, P.1
Hoogenraad, C.C.2
-
15
-
-
65149090058
-
Spine microdomains for postsynaptic signaling and plasticity
-
10.1016/j.tcb.2009.02.004 0962-8924
-
Newpher T M and Ehlers M D 2009 Spine microdomains for postsynaptic signaling and plasticity Trends Cell Biol. 5 218-27
-
(2009)
Trends Cell Biol.
, vol.19
, Issue.5
, pp. 218-227
-
-
Newpher, T.M.1
Ehlers, M.D.2
-
16
-
-
0030000583
-
Morphological plasticity in dendritic spines of cultured hippocampal neurons
-
10.1016/0306-4522(95)00490-4 0306-4522
-
Papa M and Segal M 1996 Morphological plasticity in dendritic spines of cultured hippocampal neurons Neuroscience 71 1005-11
-
(1996)
Neuroscience
, vol.71
, Issue.4
, pp. 1005-1011
-
-
Papa, M.1
Segal, M.2
-
17
-
-
0030903814
-
Dendritic spine density and LTP induction in cultured hippocampal slices
-
Collin C, Miyaguchi K and Segal M 1997 Dendritic spine density and LTP induction in cultured hippocampal slices J. Neurophysiol. 77 1614-23
-
(1997)
J. Neurophysiol.
, vol.77
, pp. 1614-1623
-
-
Collin, C.1
Miyaguchi, K.2
Segal, M.3
-
18
-
-
0032742098
-
Release of calcium from stores alters the morphology of dendritic spines in cultured hippocampal neurons
-
10.1073/pnas.96.21.12068 0027-8424
-
Korkotian E and Segal M 1999 Release of calcium from stores alters the morphology of dendritic spines in cultured hippocampal neurons Proc. Natl Acad. Sci. USA 96 12068-72
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, Issue.21
, pp. 12068-12072
-
-
Korkotian, E.1
Segal, M.2
-
19
-
-
0030023673
-
Direct measurement of coupling between dendritic spines and shafts
-
10.1126/science.272.5262.716 0036-8075
-
Svoboda K, Tank D W and Denk W 1996 Direct measurement of coupling between dendritic spines and shafts Science 272 716-9
-
(1996)
Science
, vol.272
, Issue.5262
, pp. 716-719
-
-
Svoboda, K.1
Tank, D.W.2
Denk, W.3
-
20
-
-
27644561757
-
Neuronal activity regulates diffusion across the neck of dendritic spines
-
10.1126/science.1114816 0036-8075
-
Bloodgood B L and Sabatini B L 2005 Neuronal activity regulates diffusion across the neck of dendritic spines Science 310 866-9
-
(2005)
Science
, vol.310
, Issue.5749
, pp. 866-869
-
-
Bloodgood, B.L.1
Sabatini, B.L.2
-
21
-
-
28844483840
-
Survival probability of diffusion with trapping in cellular neurobiology
-
10.1103/PhysRevE.72.031910 1539-3755 E 031910
-
Holcman D, Marchewka A and Schuss Z 2005 Survival probability of diffusion with trapping in cellular neurobiology Phys. Rev. E 72 031910
-
(2005)
Phys. Rev.
, vol.72
, Issue.3
-
-
Holcman, D.1
Marchewka, A.2
Schuss, Z.3
-
22
-
-
16244382891
-
Calcium dynamics in dendritic spines, modeling and experiments
-
10.1016/j.ceca.2005.01.015 0143-4160
-
Holcman D, Korkotian E and Segal M 2005 Calcium dynamics in dendritic spines, modeling and experiments Cell Calcium 37 467-75
-
(2005)
Cell Calcium
, vol.37
, Issue.5
, pp. 467-475
-
-
Holcman, D.1
Korkotian, E.2
Segal, M.3
-
23
-
-
34548183323
-
Diffusion in a dendritic spine: The role of geometry
-
10.1103/PhysRevE.76.021922 1539-3755 E 021922
-
Biess A, Korkotian E and Holcman D 2007 Diffusion in a dendritic spine: the role of geometry Phys. Rev. E 76 021922
-
(2007)
Phys. Rev.
, vol.76
, Issue.2
-
-
Biess, A.1
Korkotian, E.2
Holcman, D.3
-
24
-
-
77953363025
-
Some questions in computational cellular biology
-
10.1007/s11784-010-0012-1 1661-7738
-
Holcman D and Kupka I 2010 Some questions in computational cellular biology J. Fixed Point Theory Appl. 7 67-83
-
(2010)
J. Fixed Point Theory Appl.
, vol.7
, Issue.1
, pp. 67-83
-
-
Holcman, D.1
Kupka, I.2
-
25
-
-
0034700490
-
Stargazin regulates synaptic targeting of AMPA receptors by two distinct mechanisms
-
10.1038/35046031 0028-0836
-
Chen L, Chetkovich D M, Petralia R S, Sweeney N T, Kawasaki Y, Wenthold R J, Bredt D S and Nicoll R A 2000 Stargazin regulates synaptic targeting of AMPA receptors by two distinct mechanisms Nature 408 936
-
(2000)
Nature
, vol.408
, Issue.6812
, pp. 562
-
-
Chen, L.1
Chetkovich, D.M.2
Petralia, R.S.3
Sweeney, N.T.4
Kawasaki, Y.5
Wenthold, R.J.6
Bredt, D.S.7
Nicoll, R.A.8
-
26
-
-
0141918783
-
AMPA receptor trafficking at excitatory synapses
-
10.1016/S0896-6273(03)00640-8 0896-6273
-
Bredt D S and Nicoll R A 2003 AMPA receptor trafficking at excitatory synapses Neuron 40 361
-
(2003)
Neuron
, vol.40
, Issue.2
, pp. 361
-
-
Bredt, D.S.1
Nicoll, R.A.2
-
27
-
-
29144486135
-
Photoinactivation of native AMPA receptors reveals their real-time trafficking
-
10.1016/j.neuron.2005.11.030 0896-6273
-
Adesnik H, Nicoll R A and England P M 2005 Photoinactivation of native AMPA receptors reveals their real-time trafficking Neuron 48 977-85
-
(2005)
Neuron
, vol.48
, Issue.6
, pp. 977-985
-
-
Adesnik, H.1
Nicoll, R.A.2
England, P.M.3
-
28
-
-
0033546052
-
Rapid spine delivery and redistribution of AMPA receptors after synaptic NMDA receptor activation
-
10.1126/science.284.5421.1811 0036-8075
-
Shi S H, Hayashi Y, Petralia R S, Zaman S H, Wenthold R J, Svoboda K and Malinow R 1999 Rapid spine delivery and redistribution of AMPA receptors after synaptic NMDA receptor activation Science 284 1811-6
-
(1999)
Science
, vol.284
, Issue.5421
, pp. 1811-1816
-
-
Shi, S.H.1
Hayashi, Y.2
Petralia, R.S.3
Zaman, S.H.4
Wenthold, R.J.5
Svoboda, K.6
Malinow, R.7
-
29
-
-
0036305484
-
AMPA receptor trafficking and synaptic plasticity
-
10.1146/annurev.neuro.25.112701.142758 0147-006X
-
Malinow R and Malenka R C 2002 AMPA receptor trafficking and synaptic plasticity Annu. Rev. Neurosci. 25 103-26
-
(2002)
Annu. Rev. Neurosci.
, vol.25
, Issue.1
, pp. 103-126
-
-
Malinow, R.1
Malenka, R.C.2
-
30
-
-
0038222585
-
AMPA receptor trafficking and long-term potentiation
-
10.1098/rstb.2002.1233 0962-8436 B
-
Malinow R 2003 AMPA receptor trafficking and long-term potentiation Philos. Trans. R. Soc. Lond. B 358 707-14
-
(2003)
Philos. Trans. R. Soc. Lond.
, vol.358
, Issue.1432
, pp. 707-714
-
-
Malinow, R.1
-
31
-
-
33751335637
-
A biophysical model of AMPA receptor trafficking and its regulation during LTP/LTD
-
10.1523/JNEUROSCI.3601-06.2006 0270-6474
-
Earnshaw B A and Bressloff P C 2006 A biophysical model of AMPA receptor trafficking and its regulation during LTP/LTD J. Neurosci. 26 12362-73
-
(2006)
J. Neurosci.
, vol.26
, Issue.47
, pp. 12362-12373
-
-
Earnshaw, B.A.1
Bressloff, P.C.2
-
32
-
-
33749440738
-
Modeling synaptic dynamics and receptor trafficking
-
10.1529/biophysj.106.081935 0006-3495
-
Holcman D and Triller A 2006 Modeling synaptic dynamics and receptor trafficking Biophys. J. 91 2405-15
-
(2006)
Biophys. J.
, vol.91
, Issue.7
, pp. 2405-2415
-
-
Holcman, D.1
Triller, A.2
-
33
-
-
33745965151
-
Lateral diffusion drives constitutive exchange of AMPA receptors at dendritic spines and is regulated by spine morphology
-
10.1523/JNEUROSCI.1235-06.2006 0270-6474
-
Ashby M C, Maier S R, Nishimune A and Henley J M 2006 Lateral diffusion drives constitutive exchange of AMPA receptors at dendritic spines and is regulated by spine morphology J. Neurosci. 26 7046
-
(2006)
J. Neurosci.
, vol.26
, Issue.26
, pp. 7046
-
-
Ashby, M.C.1
Maier, S.R.2
Nishimune, A.3
Henley, J.M.4
-
34
-
-
84873643682
-
Stochastic Models of Intracellular Transport OCCAM Preprint Number 12/45, University of Oxford, UK (2012)
-
10.1103/RevModPhys.85.135 0034-6861
-
Bressloff P C and Newby J M 2013 Stochastic Models of Intracellular Transport OCCAM Preprint Number 12/45, University of Oxford, UK (2012) Rev. Mod. Phys. 85 135-96 and
-
(2013)
Rev. Mod. Phys.
, vol.85
, Issue.1
, pp. 135-196
-
-
Bressloff, P.C.1
Newby, J.M.2
-
35
-
-
38749148048
-
High-density mapping of single-molecule trajectories with photoactivated localization microscopy
-
10.1038/nmeth.1176 1548-7091
-
Manley S, Gillette J M, Patterson G H, Shroff H, Hess H F, Betzig E and Lippincott-Schwartz J 2008 High-density mapping of single-molecule trajectories with photoactivated localization microscopy Nature Methods 5 155
-
(2008)
Nature Methods
, vol.5
, Issue.2
, pp. 155
-
-
Manley, S.1
Gillette, J.M.2
Patterson, G.H.3
Shroff, H.4
Hess, H.F.5
Betzig, E.6
Lippincott-Schwartz, J.7
-
36
-
-
78650512639
-
Breaking the diffraction barrier: Super-resolution imaging of cells
-
10.1016/j.cell.2010.12.002 0092-8674
-
Huang B, Babcock H and Zhuang X 2010 Breaking the diffraction barrier: super-resolution imaging of cells Cell 143 1047-58
-
(2010)
Cell
, vol.143
, Issue.7
, pp. 1047-1058
-
-
Huang, B.1
Babcock, H.2
Zhuang, X.3
-
37
-
-
78650115105
-
Equilibrium and recrossings of the transition state: What can be learned from diffusion?
-
10.1021/jp101674y 1932-7447 C
-
Schuss Z 2010 Equilibrium and recrossings of the transition state: what can be learned from diffusion? J. Phys. Chem. C 114 20320-34
-
(2010)
J. Phys. Chem.
, vol.114
, Issue.48
, pp. 20320-20334
-
-
Schuss, Z.1
-
41
-
-
0027608991
-
Strong localized perturbations of eigenvalue problems
-
10.1137/0153038 0036-1399
-
Ward M J and Keller J B 1993 Strong localized perturbations of eigenvalue problems SIAM J. Appl. Math. 53 770-98
-
(1993)
SIAM J. Appl. Math.
, vol.53
, Issue.3
, pp. 770-798
-
-
Ward, M.J.1
Keller, J.B.2
-
42
-
-
0027606742
-
Summing logarithmic expansions for singularly perturbed eigenvalue problems
-
10.1137/0153039 0036-1399
-
Ward M J, Henshaw W D and Keller J B 1993 Summing logarithmic expansions for singularly perturbed eigenvalue problems SIAM J. Appl. Math. 53 799-828
-
(1993)
SIAM J. Appl. Math.
, vol.53
, Issue.3
, pp. 799-828
-
-
Ward, M.J.1
Henshaw, W.D.2
Keller, J.B.3
-
43
-
-
0026624618
-
The onset of thermal runaway in partially insulated or cooled reactors
-
10.1093/imamat/48.1.53 0272-4960
-
Ward M J and Van De Velde E 1992 The onset of thermal runaway in partially insulated or cooled reactors IMA J. Appl. Math. 48 53-85
-
(1992)
IMA J. Appl. Math.
, vol.48
, Issue.1
, pp. 53-85
-
-
Ward, M.J.1
Van De Velde, E.2
-
44
-
-
23844511916
-
Optimizing the fundamental Neumann eigenvalue for the Laplacian in a domain with small traps
-
10.1017/S0956792505006145 0956-7925
-
Kolokolnikov T, Titcombe M and Ward M J 2005 Optimizing the fundamental Neumann eigenvalue for the Laplacian in a domain with small traps Eur. J. Appl. Math. 16 161-200
-
(2005)
Eur. J. Appl. Math.
, vol.16
, Issue.2
, pp. 161-200
-
-
Kolokolnikov, T.1
Titcombe, M.2
Ward, M.J.3
-
45
-
-
77951899892
-
An asymptotic analysis of the mean first passage time for narrow escape problems: II. The sphere
-
10.1137/100782620 1540-3459
-
Cheviakov A, Ward M J and Straube R 2010 An asymptotic analysis of the mean first passage time for narrow escape problems: II. The sphere SIAM Multiscale Modeling Simul. 8 836-70
-
(2010)
SIAM Multiscale Modeling Simul.
, vol.8
, Issue.3
, pp. 836-870
-
-
Cheviakov, A.1
Ward, M.J.2
Straube, R.3
-
46
-
-
10344243553
-
Escape through a small opening: Receptor trafficking in a synaptic membrane
-
10.1007/s10955-004-5712-8 0022-4715
-
Holcman D and Schuss Z 2004 Escape through a small opening: receptor trafficking in a synaptic membrane J. Stat. Phys. 117 191-230
-
(2004)
J. Stat. Phys.
, vol.117
, Issue.5-6
, pp. 975-230
-
-
Holcman, D.1
Schuss, Z.2
-
49
-
-
33644521764
-
Narrow escape III
-
10.1007/s10955-005-8028-4 0022-4715
-
Singer A, Schuss Z and Holcman D 2006 Narrow escape III J. Stat. Phys. 122 491-509
-
(2006)
J. Stat. Phys.
, vol.122
, Issue.3
, pp. 491-509
-
-
Singer, A.1
Schuss, Z.2
Holcman, D.3
-
50
-
-
34250115420
-
Diffusion-controlled reactions in two dimensions
-
10.1007/BF00052459 0167-8019
-
Gandolfi A, Gerardi A and Marchetti F 1985 Diffusion-controlled reactions in two dimensions Acta Applicandae Math. 4 139-59
-
(1985)
Acta Applicandae Math.
, vol.4
, Issue.2-3
, pp. 139-159
-
-
Gandolfi, A.1
Gerardi, A.2
Marchetti, F.3
-
51
-
-
0022759528
-
Analysis of intracellular receptor/Ligand sorting: Calculation of mean surface and bulk diffusion times within a sphere
-
10.1016/S0006-3495(86)83463-4 0006-3495
-
Linderman J and Laufengerger D 1986 Analysis of intracellular receptor/Ligand sorting: calculation of mean surface and bulk diffusion times within a sphere Biophys. J. 50 295-305
-
(1986)
Biophys. J.
, vol.50
, Issue.2
, pp. 295-305
-
-
Linderman, J.1
Laufengerger, D.2
-
52
-
-
72049111861
-
Diffusion on a sphere with localized traps: Mean first passage time, eigenvalue asymptotics, and Fekete points
-
10.1137/080733280 0036-1399
-
Coombs D, Straube R and Ward M 2009 Diffusion on a sphere with localized traps: mean first passage time, eigenvalue asymptotics, and Fekete points SIAM J. Appl. Math. 70 302-32
-
(2009)
SIAM J. Appl. Math.
, vol.70
, Issue.1
, pp. 302-332
-
-
Coombs, D.1
Straube, R.2
Ward, M.3
-
53
-
-
36148968483
-
The narrow escape problem for diffusion in cellular microdomains
-
10.1073/pnas.0706599104 0027-8424
-
Schuss Z, Singer A and Holcman D 2007 The narrow escape problem for diffusion in cellular microdomains Proc. Natl Acad. Sci. USA 104 16098-103
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, Issue.41
, pp. 16098-16103
-
-
Schuss, Z.1
Singer, A.2
Holcman, D.3
-
54
-
-
84871838974
-
Brownian motion in dire straits: I
-
10.1137/110857519 1540-3459
-
Holcman D and Schuss Z 2012 Brownian motion in dire straits: I SIAM Multiscale Modeling Simul. 10 1204-31
-
(2012)
SIAM Multiscale Modeling Simul.
, vol.10
, Issue.4
, pp. 1204-1231
-
-
Holcman, D.1
Schuss, Z.2
-
55
-
-
80051648740
-
Narrow escape through a funnel and effective diffusion on a crowded membrane
-
10.1103/PhysRevE.84.021906 1539-3755 E 021906
-
Holcman D, Hoze N and Schuss Z 2011 Narrow escape through a funnel and effective diffusion on a crowded membrane Phys. Rev. E 84 021906
-
(2011)
Phys. Rev.
, vol.84
, Issue.2
-
-
Holcman, D.1
Hoze, N.2
Schuss, Z.3
-
56
-
-
18644384332
-
Stochastic chemical reactions in microdomains
-
10.1063/1.1849155 0021-9606 114710
-
Holcman D and Schuss Z 2005 Stochastic chemical reactions in microdomains J. Chem. Phys. 122 114710
-
(2005)
J. Chem. Phys.
, vol.122
, Issue.11
-
-
Holcman, D.1
Schuss, Z.2
-
57
-
-
65549088571
-
A dynamical corral model of protein trafficking in spines
-
10.1016/j.bpj.2008.12.3889 0006-3495
-
Bressloff P C and Earnshaw B A 2009 A dynamical corral model of protein trafficking in spines Biophys. J. 96 1786-802
-
(2009)
Biophys. J.
, vol.96
, Issue.5
, pp. 1786-1802
-
-
Bressloff, P.C.1
Earnshaw, B.A.2
-
58
-
-
84859225935
-
Diffusion laws in dendritic spines
-
10.1186/2190-8567-1-10 2190-8567
-
Holcman D and Schuss Z 2011 Diffusion laws in dendritic spines J. Math. Neurosci. 1 10
-
(2011)
J. Math. Neurosci.
, vol.1
, Issue.1
, pp. 10
-
-
Holcman, D.1
Schuss, Z.2
-
59
-
-
41849096685
-
Activation through a narrow opening
-
10.1137/060663477 0036-1399
-
Singer A and Schuss Z 2007 Activation through a narrow opening SIAM J. Appl. Math. 68 98-108
-
(2007)
SIAM J. Appl. Math.
, vol.68
, Issue.1
, pp. 98-108
-
-
Singer, A.1
Schuss, Z.2
-
60
-
-
57049089336
-
Narrow escape and leakage of Brownian particles
-
10.1103/PhysRevE.78.051111 1539-3755 E 051111
-
Singer A, Schuss Z and Holcman D 2008 Narrow escape and leakage of Brownian particles Phys. Rev. E 78 051111
-
(2008)
Phys. Rev.
, vol.78
, Issue.5
-
-
Singer, A.1
Schuss, Z.2
Holcman, D.3
-
61
-
-
80052197574
-
The narrow escape problem in a flat cylindrical microdomain with application to diffusion in the synaptic cleft
-
10.1137/100807612 1540-3459
-
Reingruber J and Holcman D 2011 The narrow escape problem in a flat cylindrical microdomain with application to diffusion in the synaptic cleft Multiscale Modeling Simul. 9 2 793-816
-
(2011)
Multiscale Modeling Simul. 9
, vol.9
, Issue.2
, pp. 793-816
-
-
Reingruber, J.1
Holcman, D.2
-
62
-
-
77951103662
-
Threshold activation for stochastic chemical reactions in microdomains
-
10.1103/PhysRevE.81.041107 1539-3755 E 041107
-
Dao Duc K and Holcman D 2010 Threshold activation for stochastic chemical reactions in microdomains Phys. Rev. E 81 041107
-
(2010)
Phys. Rev.
, vol.81
, Issue.4
-
-
Dao Duc, K.1
Holcman, D.2
-
63
-
-
84862213550
-
Using default constraints of the spindle assembly checkpoints to estimate the associate chemical rates
-
10.1186/2046-1682-5-1 2046-1682
-
Dao Duc K and Holcman D 2012 Using default constraints of the spindle assembly checkpoints to estimate the associate chemical rates BMC Biophys. 5 1
-
(2012)
BMC Biophys.
, vol.5
, Issue.1
, pp. 1
-
-
Dao Duc, K.1
Holcman, D.2
-
64
-
-
80052454851
-
Estimating the synaptic current in a multiconductance AMPA receptor model
-
10.1016/j.bpj.2011.05.032 0006-3495
-
Taflia A and Holcman D 2011 Estimating the synaptic current in a multiconductance AMPA receptor model Biophys. J. 101 781-92
-
(2011)
Biophys. J.
, vol.101
, Issue.4
, pp. 781-792
-
-
Taflia, A.1
Holcman, D.2
-
65
-
-
80053450670
-
Synapse geometry and receptor dynamics modulate synaptic strength
-
10.1371/journal.pone.0025122 1932-6203 e25122
-
Freche D, Pannasch U, Rouach N and Holcman D 2011 Synapse geometry and receptor dynamics modulate synaptic strength PLoS One 6 e25122
-
(2011)
PLoS One
, vol.6
, Issue.10
-
-
Freche, D.1
Pannasch, U.2
Rouach, N.3
Holcman, D.4
-
66
-
-
54049091941
-
Neuroligins and neurexins link synaptic function to cognitive disease
-
10.1038/nature07456 0028-0836
-
Südhof T C 2008 Neuroligins and neurexins link synaptic function to cognitive disease Nature 455 903-11
-
(2008)
Nature
, vol.455
, Issue.7215
, pp. 903-911
-
-
Südhof, T.C.1
-
67
-
-
84855341900
-
SHANK3 mutations identified in autism lead to modification of dendritic spine morphology via an actin-dependent mechanism
-
10.1038/mp.2011.57 1359-4184
-
Durand C M, Perroy J, Loll F, Perrais D, Fagni L, Bourgeron T, Montcouquiol M and Sans N 2011 SHANK3 mutations identified in autism lead to modification of dendritic spine morphology via an actin-dependent mechanism Mol. Psychiatry 17 71-84
-
(2011)
Mol. Psychiatry
, vol.17
, Issue.1
, pp. 71-84
-
-
Durand, C.M.1
Perroy, J.2
Loll, F.3
Perrais, D.4
Fagni, L.5
Bourgeron, T.6
Montcouquiol, M.7
Sans, N.8
-
68
-
-
33847119026
-
Cell adhesion molecules: Signalling functions at the synapse
-
10.1038/nrn2075 1471-003X
-
Dalva M B, McClelland A C and Kayser M S 2007 Cell adhesion molecules: signalling functions at the synapse Nature Rev. Neurosci. 8 206-20
-
(2007)
Nature Rev. Neurosci.
, vol.8
, Issue.3
, pp. 206-220
-
-
Dalva, M.B.1
McClelland, A.C.2
Kayser, M.S.3
-
69
-
-
33846564563
-
Retrograde modulation of presynaptic release probability through signaling mediated by PSD-95-neuroligin
-
10.1038/nn1837 1097-6256
-
Futai K et al 2007 Retrograde modulation of presynaptic release probability through signaling mediated by PSD-95-neuroligin Nature Neurosci. 10 186-95
-
(2007)
Nature Neurosci.
, vol.10
, Issue.2
, pp. 186-195
-
-
Futai, K.1
-
73
-
-
0027232839
-
Glycoprotein motility and dynamic domains in fluid plasma membranes
-
10.1146/annurev.bb.22.060193.002221 1056-8700
-
Sheetz M P 1993 Glycoprotein motility and dynamic domains in fluid plasma membranes Ann. Rev. Biophys. Biomol. Struct. 22 417
-
(1993)
Ann. Rev. Biophys. Biomol. Struct.
, vol.22
, Issue.1
, pp. 417
-
-
Sheetz, M.P.1
-
74
-
-
0034805172
-
Binding of cross-linked glycosylphosphatidylinositol-anchored proteins to discrete actin-associated sites and cholesterol-dependent domains
-
10.1016/S0006-3495(01)75866-3 0006-3495
-
Suzuki K and Sheetz M P 2001 Binding of cross-linked glycosylphosphatidylinositol-anchored proteins to discrete actin-associated sites and cholesterol-dependent domains Biophys. J. 81 2181
-
(2001)
Biophys. J.
, vol.81
, Issue.4
, pp. 2181
-
-
Suzuki, K.1
Sheetz, M.P.2
-
75
-
-
0027197103
-
Lateral diffusion in an archipelago. Dependence on tracer size
-
10.1016/S0006-3495(93)81548-0 0006-3495
-
Saxton M J 1993 Lateral diffusion in an archipelago. Dependence on tracer size Biophys. J. 64 1766
-
(1993)
Biophys. J.
, vol.64
, Issue.6
, pp. 1766
-
-
Saxton, M.J.1
-
76
-
-
0029163176
-
Single-particle tracking: Effects of corrals
-
10.1016/S0006-3495(95)79911-8 0006-3495
-
Saxton M J 1995 Single-particle tracking: effects of corrals Biophys. J. 69 389
-
(1995)
Biophys. J.
, vol.69
, Issue.2
, pp. 389
-
-
Saxton, M.J.1
-
77
-
-
0030956033
-
Single-particle tracking: Applications to membrane dynamics
-
10.1146/annurev.biophys.26.1.373 1056-8700
-
Saxton M J and Jacobson K 1997 Single-particle tracking: applications to membrane dynamics Annu. Rev. Biophys. Biomol. Struct. 26 373
-
(1997)
Annu. Rev. Biophys. Biomol. Struct.
, vol.26
, Issue.1
, pp. 373
-
-
Saxton, M.J.1
Jacobson, K.2
-
78
-
-
63849095895
-
Control of the postsynaptic membrane viscosity
-
10.1523/JNEUROSCI.4445-08.2009 0270-6474
-
Renner M, Choquet D and Triller A 2009 Control of the postsynaptic membrane viscosity J. Neurosci. 29 2926-37
-
(2009)
J. Neurosci.
, vol.29
, Issue.9
, pp. 2926-2937
-
-
Renner, M.1
Choquet, D.2
Triller, A.3
-
79
-
-
0000282961
-
Brownian motion in biological membranes
-
10.1073/pnas.72.8.3111 0027-8424
-
Saffman P G and Delbrück M 1975 Brownian motion in biological membranes Proc. Natl Acad. Sci. 72 3111-3
-
(1975)
Proc. Natl Acad. Sci.
, vol.72
, Issue.8
, pp. 3111-3113
-
-
Saffman, P.G.1
Delbrück, M.2
-
81
-
-
0038439320
-
The role of receptor diffusion in the organization of the postsynaptic membrane
-
10.1038/nrn1077 1471-003X
-
Choquet D and Triller A 2003 The role of receptor diffusion in the organization of the postsynaptic membrane Nature Rev. Neurosci. 4 251-65
-
(2003)
Nature Rev. Neurosci.
, vol.4
, Issue.4
, pp. 251-265
-
-
Choquet, D.1
Triller, A.2
-
82
-
-
62649088069
-
Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus
-
10.1128/JB.01513-08 0021-9193
-
Lieber A, Leis A, Kushmaro A, Minsky A and Medalia O 2009 Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus J. Bacteriol. 191 1439-45
-
(2009)
J. Bacteriol.
, vol.191
, Issue.5
, pp. 1439-1445
-
-
Lieber, A.1
Leis, A.2
Kushmaro, A.3
Minsky, A.4
Medalia, O.5
-
84
-
-
0037428220
-
-
10.1126/science.1077865 0036-8075
-
Levin-Zaidman S, Englander J, Shimoni E, Sharma A K, Minton K W and Minsky A 2003 Science 299 254-6
-
(2003)
Science
, vol.299
, Issue.5604
, pp. 254-256
-
-
Levin-Zaidman, S.1
Englander, J.2
Shimoni, E.3
Sharma, A.K.4
Minton, K.W.5
Minsky, A.6
-
85
-
-
84856284166
-
Brownian needle in dire straits: Stochastic motion of a rod in very confined narrow domains
-
10.1103/PhysRevE.85.010103 1539-3755 E 010103(R)
-
Holcman D and Schuss Z 2012 Brownian needle in dire straits: stochastic motion of a rod in very confined narrow domains Phys. Rev. E 85 010103(R)
-
(2012)
Phys. Rev.
, vol.85
, Issue.1
-
-
Holcman, D.1
Schuss, Z.2
-
86
-
-
14144256353
-
Active site restructuring regulates ligand recognition in class A penicillin-binding proteins
-
10.1073/pnas.0407186102 0027-8424
-
Macheboeuf P, Di Guilmi A M, Job V, Vernet T, Dideberg O and Dessen A 2005 Active site restructuring regulates ligand recognition in class A penicillin-binding proteins Proc. Natl Acad. Sci. USA 102 577-82
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, Issue.3
, pp. 577-582
-
-
Macheboeuf, P.1
Di Guilmi, A.M.2
Job, V.3
Vernet, T.4
Dideberg, O.5
Dessen, A.6
-
87
-
-
70349972620
-
The gated narrow escape time for molecular signaling
-
10.1103/PhysRevLett.103.148102 0031-9007 148102
-
Reingruber J and Holcman D 2009 The gated narrow escape time for molecular signaling Phys. Rev. Lett. 103 148102
-
(2009)
Phys. Rev. Lett.
, vol.103
, Issue.14
-
-
Reingruber, J.1
Holcman, D.2
-
89
-
-
79151480523
-
Nuclear geometry and rapid mitosis ensure asymmetric episome segregation in yeast
-
10.1016/j.cub.2010.12.016 0960-9822
-
Gehlen L R, Nagai S, Shimada K, Meister P, Taddei A and Gasser S M 2011 Nuclear geometry and rapid mitosis ensure asymmetric episome segregation in yeast Curr. Biol. 21 25-33
-
(2011)
Curr. Biol.
, vol.21
, Issue.1
, pp. 25-33
-
-
Gehlen, L.R.1
Nagai, S.2
Shimada, K.3
Meister, P.4
Taddei, A.5
Gasser, S.M.6
-
90
-
-
0020394540
-
Cytoplasmic actin in dendritic spines as a possible mediator of synaptic plasticity
-
Filkova E and Delay R J 1982 Cytoplasmic actin in dendritic spines as a possible mediator of synaptic plasticity J. Cell Biol. 95 350-65
-
(1982)
J. Cell Biol.
, vol.95
, pp. 350-365
-
-
Filkova, E.1
Delay, R.J.2
-
91
-
-
61549115643
-
Quantifying neurite growth mediated by interactions between secretory vesicles, microtubules and actin networks
-
10.1016/j.bpj.2008.10.036 0006-3495
-
Tsaneva K, Burgo A, Galli T and Holcman D 2009 Quantifying neurite growth mediated by interactions between secretory vesicles, microtubules and actin networks Biophys. J. 96 840-57
-
(2009)
Biophys. J.
, vol.96
, Issue.3
, pp. 840-857
-
-
Tsaneva, K.1
Burgo, A.2
Galli, T.3
Holcman, D.4
-
93
-
-
42649133151
-
The first eigenvalue of Laplace operator with small holes
-
10.1088/1751-8113/41/15/155001 1751-8113 155001
-
Holcman D and Schuss Z 2008 The first eigenvalue of Laplace operator with small holes J. Phys. A: Math. Theor. 41 155001
-
(2008)
J. Phys. A: Math. Theor.
, vol.41
, Issue.15
-
-
Holcman, D.1
Schuss, Z.2
-
94
-
-
42749097812
-
Diffusion through a cluster of small windows and flux regulation in microdomains
-
10.1016/j.physleta.2008.02.076 0375-9601 A
-
Holcman D and Schuss Z 2008 Diffusion through a cluster of small windows and flux regulation in microdomains Phys. Lett. A 372 3768-72
-
(2008)
Phys. Lett.
, vol.372
, Issue.21
, pp. 3768-3772
-
-
Holcman, D.1
Schuss, Z.2
|