메뉴 건너뛰기




Volumn 76, Issue 7, 2013, Pages

Control of flux by narrow passages and hidden targets in cellular biology

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MODEL; CELLS; CYTOLOGY; HUMAN; METABOLISM; REVIEW;

EID: 84880602787     PISSN: 00344885     EISSN: None     Source Type: Journal    
DOI: 10.1088/0034-4885/76/7/074601     Document Type: Article
Times cited : (66)

References (94)
  • 2
    • 84880582220 scopus 로고    scopus 로고
    • www.nobelprize.org/nobel-prizes/chemistry/laureates/2003/ mackinnon-lecture.html
  • 3
    • 0031030225 scopus 로고    scopus 로고
    • Permeation through an open channel: Poisson-Nernst-Planck theory of a synthetic ionic channel
    • 10.1016/S0006-3495(97)78650-8 0006-3495
    • Chen D, Lear J and Eisenberg R S 1997 Permeation through an open channel: poisson-Nernst-Planck theory of a synthetic ionic channel Biophys. J. 72 97-116
    • (1997) Biophys. J. , vol.72 , Issue.1 , pp. 97-116
    • Chen, D.1    Lear, J.2    Eisenberg, R.S.3
  • 4
    • 34548270391 scopus 로고    scopus 로고
    • Inverse problems related to ion channel selectivity
    • 10.1137/060664689 0036-1399
    • Burger M, Eisenberg R S and Engl H W 2007 Inverse problems related to ion channel selectivity SIAM J. Appl. Math. 67 960-89
    • (2007) SIAM J. Appl. Math. , vol.67 , Issue.4 , pp. 960-989
    • Burger, M.1    Eisenberg, R.S.2    Engl, H.W.3
  • 5
    • 0032981778 scopus 로고    scopus 로고
    • Selectivity and permeation in calcium release channel of cardiac muscle: Alkali metal ions
    • 10.1016/S0006-3495(99)77297-8 0006-3495
    • Chen D P, Xu L, Tripathy A, Meissner G and Eisenberg R S 1999 Selectivity and permeation in calcium release channel of cardiac muscle: alkali metal ions Biophys. J. 76 1346-66
    • (1999) Biophys. J. , vol.76 , Issue.3 , pp. 1346-1366
    • Chen, D.P.1    Xu, L.2    Tripathy, A.3    Meissner, G.4    Eisenberg, R.S.5
  • 6
    • 34548717678 scopus 로고    scopus 로고
    • Steric selectivity in Na channels crising from protein polarization and mobile side chains
    • 10.1529/biophysj.107.105478 0006-3495
    • Boda D, Nonner W, Valisko M, Henderson D, Eisenberg R S and Gillespie D 2007 Steric selectivity in Na channels crising from protein polarization and mobile side chains Biophys. J. 93 1960-80
    • (2007) Biophys. J. , vol.93 , Issue.6 , pp. 1960-1980
    • Boda, D.1    Nonner, W.2    Valisko, M.3    Henderson, D.4    Eisenberg, R.S.5    Gillespie, D.6
  • 7
    • 0027157588 scopus 로고
    • Charges, currents, and potentials in ionic channels of one conformation
    • 10.1016/S0006-3495(93)81507-8 0006-3495
    • Eisenberg R S and Chen D 1993 Charges, currents, and potentials in ionic channels of one conformation Biophys. J. 64 1405-21
    • (1993) Biophys. J. , vol.64 , Issue.5 , pp. 1405-1421
    • Eisenberg, R.S.1    Chen, D.2
  • 8
    • 12344316628 scopus 로고    scopus 로고
    • Issues in modeling ion transport in biological channels: Self-consistent particle-based simulations
    • 10.1023/B:JCEL.0000011431.17843.a6 1569-8025
    • Aboud, Saraniti S M and Eisenberg R S 2003 Issues in modeling ion transport in biological channels: self-consistent particle-based simulations J. Comput. Electron. 2 239-43
    • (2003) J. Comput. Electron. , vol.2 , Issue.2-4 , pp. 239-243
    • Aboud1    Saraniti, S.M.2    Eisenberg, R.S.3
  • 9
    • 0033884302 scopus 로고    scopus 로고
    • A grand canonical Monte Carlo - Brownian dynamics algorithm for simulating ion channels
    • 10.1016/S0006-3495(00)76336-3 0006-3495
    • Im W, Seefeld S and Roux B 2000 A grand canonical Monte Carlo - Brownian dynamics algorithm for simulating ion channels Biophys. J. 79 788-801
    • (2000) Biophys. J. , vol.79 , Issue.2 , pp. 788-801
    • Im, W.1    Seefeld, S.2    Roux, B.3
  • 10
    • 1342344804 scopus 로고    scopus 로고
    • Comparison of dynamic lattice Monte Carlo simulations and the dielectric self-energy Poisson-Nernst-Planck continuum theory for model ion channels
    • 10.1021/jp0355307 1520-6106 B
    • Graf P, Kurnikova M G, Coalson R D and Nitzan A 2004 Comparison of dynamic lattice Monte Carlo simulations and the dielectric self-energy Poisson-Nernst-Planck continuum theory for model ion channels J. Phys. Chem. B 108 2006-15
    • (2004) J. Phys. Chem. , vol.108 , Issue.6 , pp. 2006-2015
    • Graf, P.1    Kurnikova, M.G.2    Coalson, R.D.3    Nitzan, A.4
  • 11
    • 0024203547 scopus 로고
    • Dendritic spines of rat cerebellar Purkinje cells: Serial electron microscopy with reference to their biophysical characteristics
    • Harris K M and Stevens J K 1988 Dendritic spines of rat cerebellar Purkinje cells: serial electron microscopy with reference to their biophysical characteristics J. Neurosci. 12 4455-69
    • (1988) J. Neurosci. , vol.12 , pp. 4455-4469
    • Harris, K.M.1    Stevens, J.K.2
  • 12
    • 43449117577 scopus 로고    scopus 로고
    • Balancing structure and function at hippocampal dendritic spines
    • 10.1146/annurev.neuro.31.060407.125646 0147-006X
    • Bourne J N and Harris K M 2008 Balancing structure and function at hippocampal dendritic spines Annu. Rev. Neurosci. 31 47-67
    • (2008) Annu. Rev. Neurosci. , vol.31 , Issue.1 , pp. 47-67
    • Bourne, J.N.1    Harris, K.M.2
  • 13
    • 9644260584 scopus 로고    scopus 로고
    • Dynamic regulation of spine-dendrite coupling in cultured hippocampal neurons
    • 10.1111/j.1460-9568.2004.03691.x 0953-816X
    • Korkotian E, Holcman D and Segal M 2004 Dynamic regulation of spine-dendrite coupling in cultured hippocampal neurons Euro. J. Neurosci. 20 2649-63
    • (2004) Euro. J. Neurosci. , vol.20 , Issue.10 , pp. 2649-2663
    • Korkotian, E.1    Holcman, D.2    Segal, M.3
  • 14
    • 77952334420 scopus 로고    scopus 로고
    • Actin in dendritic spines: Connecting dynamics to function
    • 10.1083/jcb.201003008 0021-9525
    • Hotulainen P and Hoogenraad C C 2010 Actin in dendritic spines: connecting dynamics to function J. Cell Biol. 189 619-29
    • (2010) J. Cell Biol. , vol.189 , Issue.4 , pp. 619-629
    • Hotulainen, P.1    Hoogenraad, C.C.2
  • 15
    • 65149090058 scopus 로고    scopus 로고
    • Spine microdomains for postsynaptic signaling and plasticity
    • 10.1016/j.tcb.2009.02.004 0962-8924
    • Newpher T M and Ehlers M D 2009 Spine microdomains for postsynaptic signaling and plasticity Trends Cell Biol. 5 218-27
    • (2009) Trends Cell Biol. , vol.19 , Issue.5 , pp. 218-227
    • Newpher, T.M.1    Ehlers, M.D.2
  • 16
    • 0030000583 scopus 로고    scopus 로고
    • Morphological plasticity in dendritic spines of cultured hippocampal neurons
    • 10.1016/0306-4522(95)00490-4 0306-4522
    • Papa M and Segal M 1996 Morphological plasticity in dendritic spines of cultured hippocampal neurons Neuroscience 71 1005-11
    • (1996) Neuroscience , vol.71 , Issue.4 , pp. 1005-1011
    • Papa, M.1    Segal, M.2
  • 17
    • 0030903814 scopus 로고    scopus 로고
    • Dendritic spine density and LTP induction in cultured hippocampal slices
    • Collin C, Miyaguchi K and Segal M 1997 Dendritic spine density and LTP induction in cultured hippocampal slices J. Neurophysiol. 77 1614-23
    • (1997) J. Neurophysiol. , vol.77 , pp. 1614-1623
    • Collin, C.1    Miyaguchi, K.2    Segal, M.3
  • 18
    • 0032742098 scopus 로고    scopus 로고
    • Release of calcium from stores alters the morphology of dendritic spines in cultured hippocampal neurons
    • 10.1073/pnas.96.21.12068 0027-8424
    • Korkotian E and Segal M 1999 Release of calcium from stores alters the morphology of dendritic spines in cultured hippocampal neurons Proc. Natl Acad. Sci. USA 96 12068-72
    • (1999) Proc. Natl Acad. Sci. USA , vol.96 , Issue.21 , pp. 12068-12072
    • Korkotian, E.1    Segal, M.2
  • 19
    • 0030023673 scopus 로고    scopus 로고
    • Direct measurement of coupling between dendritic spines and shafts
    • 10.1126/science.272.5262.716 0036-8075
    • Svoboda K, Tank D W and Denk W 1996 Direct measurement of coupling between dendritic spines and shafts Science 272 716-9
    • (1996) Science , vol.272 , Issue.5262 , pp. 716-719
    • Svoboda, K.1    Tank, D.W.2    Denk, W.3
  • 20
    • 27644561757 scopus 로고    scopus 로고
    • Neuronal activity regulates diffusion across the neck of dendritic spines
    • 10.1126/science.1114816 0036-8075
    • Bloodgood B L and Sabatini B L 2005 Neuronal activity regulates diffusion across the neck of dendritic spines Science 310 866-9
    • (2005) Science , vol.310 , Issue.5749 , pp. 866-869
    • Bloodgood, B.L.1    Sabatini, B.L.2
  • 21
    • 28844483840 scopus 로고    scopus 로고
    • Survival probability of diffusion with trapping in cellular neurobiology
    • 10.1103/PhysRevE.72.031910 1539-3755 E 031910
    • Holcman D, Marchewka A and Schuss Z 2005 Survival probability of diffusion with trapping in cellular neurobiology Phys. Rev. E 72 031910
    • (2005) Phys. Rev. , vol.72 , Issue.3
    • Holcman, D.1    Marchewka, A.2    Schuss, Z.3
  • 22
    • 16244382891 scopus 로고    scopus 로고
    • Calcium dynamics in dendritic spines, modeling and experiments
    • 10.1016/j.ceca.2005.01.015 0143-4160
    • Holcman D, Korkotian E and Segal M 2005 Calcium dynamics in dendritic spines, modeling and experiments Cell Calcium 37 467-75
    • (2005) Cell Calcium , vol.37 , Issue.5 , pp. 467-475
    • Holcman, D.1    Korkotian, E.2    Segal, M.3
  • 23
    • 34548183323 scopus 로고    scopus 로고
    • Diffusion in a dendritic spine: The role of geometry
    • 10.1103/PhysRevE.76.021922 1539-3755 E 021922
    • Biess A, Korkotian E and Holcman D 2007 Diffusion in a dendritic spine: the role of geometry Phys. Rev. E 76 021922
    • (2007) Phys. Rev. , vol.76 , Issue.2
    • Biess, A.1    Korkotian, E.2    Holcman, D.3
  • 24
    • 77953363025 scopus 로고    scopus 로고
    • Some questions in computational cellular biology
    • 10.1007/s11784-010-0012-1 1661-7738
    • Holcman D and Kupka I 2010 Some questions in computational cellular biology J. Fixed Point Theory Appl. 7 67-83
    • (2010) J. Fixed Point Theory Appl. , vol.7 , Issue.1 , pp. 67-83
    • Holcman, D.1    Kupka, I.2
  • 26
    • 0141918783 scopus 로고    scopus 로고
    • AMPA receptor trafficking at excitatory synapses
    • 10.1016/S0896-6273(03)00640-8 0896-6273
    • Bredt D S and Nicoll R A 2003 AMPA receptor trafficking at excitatory synapses Neuron 40 361
    • (2003) Neuron , vol.40 , Issue.2 , pp. 361
    • Bredt, D.S.1    Nicoll, R.A.2
  • 27
    • 29144486135 scopus 로고    scopus 로고
    • Photoinactivation of native AMPA receptors reveals their real-time trafficking
    • 10.1016/j.neuron.2005.11.030 0896-6273
    • Adesnik H, Nicoll R A and England P M 2005 Photoinactivation of native AMPA receptors reveals their real-time trafficking Neuron 48 977-85
    • (2005) Neuron , vol.48 , Issue.6 , pp. 977-985
    • Adesnik, H.1    Nicoll, R.A.2    England, P.M.3
  • 28
    • 0033546052 scopus 로고    scopus 로고
    • Rapid spine delivery and redistribution of AMPA receptors after synaptic NMDA receptor activation
    • 10.1126/science.284.5421.1811 0036-8075
    • Shi S H, Hayashi Y, Petralia R S, Zaman S H, Wenthold R J, Svoboda K and Malinow R 1999 Rapid spine delivery and redistribution of AMPA receptors after synaptic NMDA receptor activation Science 284 1811-6
    • (1999) Science , vol.284 , Issue.5421 , pp. 1811-1816
    • Shi, S.H.1    Hayashi, Y.2    Petralia, R.S.3    Zaman, S.H.4    Wenthold, R.J.5    Svoboda, K.6    Malinow, R.7
  • 29
    • 0036305484 scopus 로고    scopus 로고
    • AMPA receptor trafficking and synaptic plasticity
    • 10.1146/annurev.neuro.25.112701.142758 0147-006X
    • Malinow R and Malenka R C 2002 AMPA receptor trafficking and synaptic plasticity Annu. Rev. Neurosci. 25 103-26
    • (2002) Annu. Rev. Neurosci. , vol.25 , Issue.1 , pp. 103-126
    • Malinow, R.1    Malenka, R.C.2
  • 30
    • 0038222585 scopus 로고    scopus 로고
    • AMPA receptor trafficking and long-term potentiation
    • 10.1098/rstb.2002.1233 0962-8436 B
    • Malinow R 2003 AMPA receptor trafficking and long-term potentiation Philos. Trans. R. Soc. Lond. B 358 707-14
    • (2003) Philos. Trans. R. Soc. Lond. , vol.358 , Issue.1432 , pp. 707-714
    • Malinow, R.1
  • 31
    • 33751335637 scopus 로고    scopus 로고
    • A biophysical model of AMPA receptor trafficking and its regulation during LTP/LTD
    • 10.1523/JNEUROSCI.3601-06.2006 0270-6474
    • Earnshaw B A and Bressloff P C 2006 A biophysical model of AMPA receptor trafficking and its regulation during LTP/LTD J. Neurosci. 26 12362-73
    • (2006) J. Neurosci. , vol.26 , Issue.47 , pp. 12362-12373
    • Earnshaw, B.A.1    Bressloff, P.C.2
  • 32
    • 33749440738 scopus 로고    scopus 로고
    • Modeling synaptic dynamics and receptor trafficking
    • 10.1529/biophysj.106.081935 0006-3495
    • Holcman D and Triller A 2006 Modeling synaptic dynamics and receptor trafficking Biophys. J. 91 2405-15
    • (2006) Biophys. J. , vol.91 , Issue.7 , pp. 2405-2415
    • Holcman, D.1    Triller, A.2
  • 33
    • 33745965151 scopus 로고    scopus 로고
    • Lateral diffusion drives constitutive exchange of AMPA receptors at dendritic spines and is regulated by spine morphology
    • 10.1523/JNEUROSCI.1235-06.2006 0270-6474
    • Ashby M C, Maier S R, Nishimune A and Henley J M 2006 Lateral diffusion drives constitutive exchange of AMPA receptors at dendritic spines and is regulated by spine morphology J. Neurosci. 26 7046
    • (2006) J. Neurosci. , vol.26 , Issue.26 , pp. 7046
    • Ashby, M.C.1    Maier, S.R.2    Nishimune, A.3    Henley, J.M.4
  • 34
    • 84873643682 scopus 로고    scopus 로고
    • Stochastic Models of Intracellular Transport OCCAM Preprint Number 12/45, University of Oxford, UK (2012)
    • 10.1103/RevModPhys.85.135 0034-6861
    • Bressloff P C and Newby J M 2013 Stochastic Models of Intracellular Transport OCCAM Preprint Number 12/45, University of Oxford, UK (2012) Rev. Mod. Phys. 85 135-96 and
    • (2013) Rev. Mod. Phys. , vol.85 , Issue.1 , pp. 135-196
    • Bressloff, P.C.1    Newby, J.M.2
  • 36
    • 78650512639 scopus 로고    scopus 로고
    • Breaking the diffraction barrier: Super-resolution imaging of cells
    • 10.1016/j.cell.2010.12.002 0092-8674
    • Huang B, Babcock H and Zhuang X 2010 Breaking the diffraction barrier: super-resolution imaging of cells Cell 143 1047-58
    • (2010) Cell , vol.143 , Issue.7 , pp. 1047-1058
    • Huang, B.1    Babcock, H.2    Zhuang, X.3
  • 37
    • 78650115105 scopus 로고    scopus 로고
    • Equilibrium and recrossings of the transition state: What can be learned from diffusion?
    • 10.1021/jp101674y 1932-7447 C
    • Schuss Z 2010 Equilibrium and recrossings of the transition state: what can be learned from diffusion? J. Phys. Chem. C 114 20320-34
    • (2010) J. Phys. Chem. , vol.114 , Issue.48 , pp. 20320-20334
    • Schuss, Z.1
  • 39
    • 0012060969 scopus 로고
    • On the statistical treatment of dynamical systems
    • 10.1017/CBO9780511897818.012
    • Pontryagin L S, Andronov A A and Vitt A A 1989 On the statistical treatment of dynamical systems Noise Nonlinear Dyn. 1 329-40
    • (1989) Noise Nonlinear Dyn. , vol.1 , pp. 329-340
    • Pontryagin, L.S.1    Andronov, A.A.2    Vitt, A.A.3
  • 41
    • 0027608991 scopus 로고
    • Strong localized perturbations of eigenvalue problems
    • 10.1137/0153038 0036-1399
    • Ward M J and Keller J B 1993 Strong localized perturbations of eigenvalue problems SIAM J. Appl. Math. 53 770-98
    • (1993) SIAM J. Appl. Math. , vol.53 , Issue.3 , pp. 770-798
    • Ward, M.J.1    Keller, J.B.2
  • 42
    • 0027606742 scopus 로고
    • Summing logarithmic expansions for singularly perturbed eigenvalue problems
    • 10.1137/0153039 0036-1399
    • Ward M J, Henshaw W D and Keller J B 1993 Summing logarithmic expansions for singularly perturbed eigenvalue problems SIAM J. Appl. Math. 53 799-828
    • (1993) SIAM J. Appl. Math. , vol.53 , Issue.3 , pp. 799-828
    • Ward, M.J.1    Henshaw, W.D.2    Keller, J.B.3
  • 43
    • 0026624618 scopus 로고
    • The onset of thermal runaway in partially insulated or cooled reactors
    • 10.1093/imamat/48.1.53 0272-4960
    • Ward M J and Van De Velde E 1992 The onset of thermal runaway in partially insulated or cooled reactors IMA J. Appl. Math. 48 53-85
    • (1992) IMA J. Appl. Math. , vol.48 , Issue.1 , pp. 53-85
    • Ward, M.J.1    Van De Velde, E.2
  • 44
    • 23844511916 scopus 로고    scopus 로고
    • Optimizing the fundamental Neumann eigenvalue for the Laplacian in a domain with small traps
    • 10.1017/S0956792505006145 0956-7925
    • Kolokolnikov T, Titcombe M and Ward M J 2005 Optimizing the fundamental Neumann eigenvalue for the Laplacian in a domain with small traps Eur. J. Appl. Math. 16 161-200
    • (2005) Eur. J. Appl. Math. , vol.16 , Issue.2 , pp. 161-200
    • Kolokolnikov, T.1    Titcombe, M.2    Ward, M.J.3
  • 45
    • 77951899892 scopus 로고    scopus 로고
    • An asymptotic analysis of the mean first passage time for narrow escape problems: II. The sphere
    • 10.1137/100782620 1540-3459
    • Cheviakov A, Ward M J and Straube R 2010 An asymptotic analysis of the mean first passage time for narrow escape problems: II. The sphere SIAM Multiscale Modeling Simul. 8 836-70
    • (2010) SIAM Multiscale Modeling Simul. , vol.8 , Issue.3 , pp. 836-870
    • Cheviakov, A.1    Ward, M.J.2    Straube, R.3
  • 46
    • 10344243553 scopus 로고    scopus 로고
    • Escape through a small opening: Receptor trafficking in a synaptic membrane
    • 10.1007/s10955-004-5712-8 0022-4715
    • Holcman D and Schuss Z 2004 Escape through a small opening: receptor trafficking in a synaptic membrane J. Stat. Phys. 117 191-230
    • (2004) J. Stat. Phys. , vol.117 , Issue.5-6 , pp. 975-230
    • Holcman, D.1    Schuss, Z.2
  • 48
    • 33644532542 scopus 로고    scopus 로고
    • Narrow escape II
    • 10.1007/s10955-005-8027-5 0022-4715
    • Singer A, Schuss Z and Holcman D 2006 Narrow escape II J. Stat. Phys. 122 465-89
    • (2006) J. Stat. Phys. , vol.122 , Issue.3 , pp. 465-489
    • Singer, A.1    Schuss, Z.2    Holcman, D.3
  • 49
    • 33644521764 scopus 로고    scopus 로고
    • Narrow escape III
    • 10.1007/s10955-005-8028-4 0022-4715
    • Singer A, Schuss Z and Holcman D 2006 Narrow escape III J. Stat. Phys. 122 491-509
    • (2006) J. Stat. Phys. , vol.122 , Issue.3 , pp. 491-509
    • Singer, A.1    Schuss, Z.2    Holcman, D.3
  • 50
    • 34250115420 scopus 로고
    • Diffusion-controlled reactions in two dimensions
    • 10.1007/BF00052459 0167-8019
    • Gandolfi A, Gerardi A and Marchetti F 1985 Diffusion-controlled reactions in two dimensions Acta Applicandae Math. 4 139-59
    • (1985) Acta Applicandae Math. , vol.4 , Issue.2-3 , pp. 139-159
    • Gandolfi, A.1    Gerardi, A.2    Marchetti, F.3
  • 51
    • 0022759528 scopus 로고
    • Analysis of intracellular receptor/Ligand sorting: Calculation of mean surface and bulk diffusion times within a sphere
    • 10.1016/S0006-3495(86)83463-4 0006-3495
    • Linderman J and Laufengerger D 1986 Analysis of intracellular receptor/Ligand sorting: calculation of mean surface and bulk diffusion times within a sphere Biophys. J. 50 295-305
    • (1986) Biophys. J. , vol.50 , Issue.2 , pp. 295-305
    • Linderman, J.1    Laufengerger, D.2
  • 52
    • 72049111861 scopus 로고    scopus 로고
    • Diffusion on a sphere with localized traps: Mean first passage time, eigenvalue asymptotics, and Fekete points
    • 10.1137/080733280 0036-1399
    • Coombs D, Straube R and Ward M 2009 Diffusion on a sphere with localized traps: mean first passage time, eigenvalue asymptotics, and Fekete points SIAM J. Appl. Math. 70 302-32
    • (2009) SIAM J. Appl. Math. , vol.70 , Issue.1 , pp. 302-332
    • Coombs, D.1    Straube, R.2    Ward, M.3
  • 53
    • 36148968483 scopus 로고    scopus 로고
    • The narrow escape problem for diffusion in cellular microdomains
    • 10.1073/pnas.0706599104 0027-8424
    • Schuss Z, Singer A and Holcman D 2007 The narrow escape problem for diffusion in cellular microdomains Proc. Natl Acad. Sci. USA 104 16098-103
    • (2007) Proc. Natl Acad. Sci. USA , vol.104 , Issue.41 , pp. 16098-16103
    • Schuss, Z.1    Singer, A.2    Holcman, D.3
  • 54
    • 84871838974 scopus 로고    scopus 로고
    • Brownian motion in dire straits: I
    • 10.1137/110857519 1540-3459
    • Holcman D and Schuss Z 2012 Brownian motion in dire straits: I SIAM Multiscale Modeling Simul. 10 1204-31
    • (2012) SIAM Multiscale Modeling Simul. , vol.10 , Issue.4 , pp. 1204-1231
    • Holcman, D.1    Schuss, Z.2
  • 55
    • 80051648740 scopus 로고    scopus 로고
    • Narrow escape through a funnel and effective diffusion on a crowded membrane
    • 10.1103/PhysRevE.84.021906 1539-3755 E 021906
    • Holcman D, Hoze N and Schuss Z 2011 Narrow escape through a funnel and effective diffusion on a crowded membrane Phys. Rev. E 84 021906
    • (2011) Phys. Rev. , vol.84 , Issue.2
    • Holcman, D.1    Hoze, N.2    Schuss, Z.3
  • 56
    • 18644384332 scopus 로고    scopus 로고
    • Stochastic chemical reactions in microdomains
    • 10.1063/1.1849155 0021-9606 114710
    • Holcman D and Schuss Z 2005 Stochastic chemical reactions in microdomains J. Chem. Phys. 122 114710
    • (2005) J. Chem. Phys. , vol.122 , Issue.11
    • Holcman, D.1    Schuss, Z.2
  • 57
    • 65549088571 scopus 로고    scopus 로고
    • A dynamical corral model of protein trafficking in spines
    • 10.1016/j.bpj.2008.12.3889 0006-3495
    • Bressloff P C and Earnshaw B A 2009 A dynamical corral model of protein trafficking in spines Biophys. J. 96 1786-802
    • (2009) Biophys. J. , vol.96 , Issue.5 , pp. 1786-1802
    • Bressloff, P.C.1    Earnshaw, B.A.2
  • 58
    • 84859225935 scopus 로고    scopus 로고
    • Diffusion laws in dendritic spines
    • 10.1186/2190-8567-1-10 2190-8567
    • Holcman D and Schuss Z 2011 Diffusion laws in dendritic spines J. Math. Neurosci. 1 10
    • (2011) J. Math. Neurosci. , vol.1 , Issue.1 , pp. 10
    • Holcman, D.1    Schuss, Z.2
  • 59
    • 41849096685 scopus 로고    scopus 로고
    • Activation through a narrow opening
    • 10.1137/060663477 0036-1399
    • Singer A and Schuss Z 2007 Activation through a narrow opening SIAM J. Appl. Math. 68 98-108
    • (2007) SIAM J. Appl. Math. , vol.68 , Issue.1 , pp. 98-108
    • Singer, A.1    Schuss, Z.2
  • 60
    • 57049089336 scopus 로고    scopus 로고
    • Narrow escape and leakage of Brownian particles
    • 10.1103/PhysRevE.78.051111 1539-3755 E 051111
    • Singer A, Schuss Z and Holcman D 2008 Narrow escape and leakage of Brownian particles Phys. Rev. E 78 051111
    • (2008) Phys. Rev. , vol.78 , Issue.5
    • Singer, A.1    Schuss, Z.2    Holcman, D.3
  • 61
    • 80052197574 scopus 로고    scopus 로고
    • The narrow escape problem in a flat cylindrical microdomain with application to diffusion in the synaptic cleft
    • 10.1137/100807612 1540-3459
    • Reingruber J and Holcman D 2011 The narrow escape problem in a flat cylindrical microdomain with application to diffusion in the synaptic cleft Multiscale Modeling Simul. 9 2 793-816
    • (2011) Multiscale Modeling Simul. 9 , vol.9 , Issue.2 , pp. 793-816
    • Reingruber, J.1    Holcman, D.2
  • 62
    • 77951103662 scopus 로고    scopus 로고
    • Threshold activation for stochastic chemical reactions in microdomains
    • 10.1103/PhysRevE.81.041107 1539-3755 E 041107
    • Dao Duc K and Holcman D 2010 Threshold activation for stochastic chemical reactions in microdomains Phys. Rev. E 81 041107
    • (2010) Phys. Rev. , vol.81 , Issue.4
    • Dao Duc, K.1    Holcman, D.2
  • 63
    • 84862213550 scopus 로고    scopus 로고
    • Using default constraints of the spindle assembly checkpoints to estimate the associate chemical rates
    • 10.1186/2046-1682-5-1 2046-1682
    • Dao Duc K and Holcman D 2012 Using default constraints of the spindle assembly checkpoints to estimate the associate chemical rates BMC Biophys. 5 1
    • (2012) BMC Biophys. , vol.5 , Issue.1 , pp. 1
    • Dao Duc, K.1    Holcman, D.2
  • 64
    • 80052454851 scopus 로고    scopus 로고
    • Estimating the synaptic current in a multiconductance AMPA receptor model
    • 10.1016/j.bpj.2011.05.032 0006-3495
    • Taflia A and Holcman D 2011 Estimating the synaptic current in a multiconductance AMPA receptor model Biophys. J. 101 781-92
    • (2011) Biophys. J. , vol.101 , Issue.4 , pp. 781-792
    • Taflia, A.1    Holcman, D.2
  • 65
    • 80053450670 scopus 로고    scopus 로고
    • Synapse geometry and receptor dynamics modulate synaptic strength
    • 10.1371/journal.pone.0025122 1932-6203 e25122
    • Freche D, Pannasch U, Rouach N and Holcman D 2011 Synapse geometry and receptor dynamics modulate synaptic strength PLoS One 6 e25122
    • (2011) PLoS One , vol.6 , Issue.10
    • Freche, D.1    Pannasch, U.2    Rouach, N.3    Holcman, D.4
  • 66
    • 54049091941 scopus 로고    scopus 로고
    • Neuroligins and neurexins link synaptic function to cognitive disease
    • 10.1038/nature07456 0028-0836
    • Südhof T C 2008 Neuroligins and neurexins link synaptic function to cognitive disease Nature 455 903-11
    • (2008) Nature , vol.455 , Issue.7215 , pp. 903-911
    • Südhof, T.C.1
  • 67
    • 84855341900 scopus 로고    scopus 로고
    • SHANK3 mutations identified in autism lead to modification of dendritic spine morphology via an actin-dependent mechanism
    • 10.1038/mp.2011.57 1359-4184
    • Durand C M, Perroy J, Loll F, Perrais D, Fagni L, Bourgeron T, Montcouquiol M and Sans N 2011 SHANK3 mutations identified in autism lead to modification of dendritic spine morphology via an actin-dependent mechanism Mol. Psychiatry 17 71-84
    • (2011) Mol. Psychiatry , vol.17 , Issue.1 , pp. 71-84
    • Durand, C.M.1    Perroy, J.2    Loll, F.3    Perrais, D.4    Fagni, L.5    Bourgeron, T.6    Montcouquiol, M.7    Sans, N.8
  • 68
    • 33847119026 scopus 로고    scopus 로고
    • Cell adhesion molecules: Signalling functions at the synapse
    • 10.1038/nrn2075 1471-003X
    • Dalva M B, McClelland A C and Kayser M S 2007 Cell adhesion molecules: signalling functions at the synapse Nature Rev. Neurosci. 8 206-20
    • (2007) Nature Rev. Neurosci. , vol.8 , Issue.3 , pp. 206-220
    • Dalva, M.B.1    McClelland, A.C.2    Kayser, M.S.3
  • 69
    • 33846564563 scopus 로고    scopus 로고
    • Retrograde modulation of presynaptic release probability through signaling mediated by PSD-95-neuroligin
    • 10.1038/nn1837 1097-6256
    • Futai K et al 2007 Retrograde modulation of presynaptic release probability through signaling mediated by PSD-95-neuroligin Nature Neurosci. 10 186-95
    • (2007) Nature Neurosci. , vol.10 , Issue.2 , pp. 186-195
    • Futai, K.1
  • 73
    • 0027232839 scopus 로고
    • Glycoprotein motility and dynamic domains in fluid plasma membranes
    • 10.1146/annurev.bb.22.060193.002221 1056-8700
    • Sheetz M P 1993 Glycoprotein motility and dynamic domains in fluid plasma membranes Ann. Rev. Biophys. Biomol. Struct. 22 417
    • (1993) Ann. Rev. Biophys. Biomol. Struct. , vol.22 , Issue.1 , pp. 417
    • Sheetz, M.P.1
  • 74
    • 0034805172 scopus 로고    scopus 로고
    • Binding of cross-linked glycosylphosphatidylinositol-anchored proteins to discrete actin-associated sites and cholesterol-dependent domains
    • 10.1016/S0006-3495(01)75866-3 0006-3495
    • Suzuki K and Sheetz M P 2001 Binding of cross-linked glycosylphosphatidylinositol-anchored proteins to discrete actin-associated sites and cholesterol-dependent domains Biophys. J. 81 2181
    • (2001) Biophys. J. , vol.81 , Issue.4 , pp. 2181
    • Suzuki, K.1    Sheetz, M.P.2
  • 75
    • 0027197103 scopus 로고
    • Lateral diffusion in an archipelago. Dependence on tracer size
    • 10.1016/S0006-3495(93)81548-0 0006-3495
    • Saxton M J 1993 Lateral diffusion in an archipelago. Dependence on tracer size Biophys. J. 64 1766
    • (1993) Biophys. J. , vol.64 , Issue.6 , pp. 1766
    • Saxton, M.J.1
  • 76
    • 0029163176 scopus 로고
    • Single-particle tracking: Effects of corrals
    • 10.1016/S0006-3495(95)79911-8 0006-3495
    • Saxton M J 1995 Single-particle tracking: effects of corrals Biophys. J. 69 389
    • (1995) Biophys. J. , vol.69 , Issue.2 , pp. 389
    • Saxton, M.J.1
  • 77
    • 0030956033 scopus 로고    scopus 로고
    • Single-particle tracking: Applications to membrane dynamics
    • 10.1146/annurev.biophys.26.1.373 1056-8700
    • Saxton M J and Jacobson K 1997 Single-particle tracking: applications to membrane dynamics Annu. Rev. Biophys. Biomol. Struct. 26 373
    • (1997) Annu. Rev. Biophys. Biomol. Struct. , vol.26 , Issue.1 , pp. 373
    • Saxton, M.J.1    Jacobson, K.2
  • 78
    • 63849095895 scopus 로고    scopus 로고
    • Control of the postsynaptic membrane viscosity
    • 10.1523/JNEUROSCI.4445-08.2009 0270-6474
    • Renner M, Choquet D and Triller A 2009 Control of the postsynaptic membrane viscosity J. Neurosci. 29 2926-37
    • (2009) J. Neurosci. , vol.29 , Issue.9 , pp. 2926-2937
    • Renner, M.1    Choquet, D.2    Triller, A.3
  • 79
    • 0000282961 scopus 로고
    • Brownian motion in biological membranes
    • 10.1073/pnas.72.8.3111 0027-8424
    • Saffman P G and Delbrück M 1975 Brownian motion in biological membranes Proc. Natl Acad. Sci. 72 3111-3
    • (1975) Proc. Natl Acad. Sci. , vol.72 , Issue.8 , pp. 3111-3113
    • Saffman, P.G.1    Delbrück, M.2
  • 81
    • 0038439320 scopus 로고    scopus 로고
    • The role of receptor diffusion in the organization of the postsynaptic membrane
    • 10.1038/nrn1077 1471-003X
    • Choquet D and Triller A 2003 The role of receptor diffusion in the organization of the postsynaptic membrane Nature Rev. Neurosci. 4 251-65
    • (2003) Nature Rev. Neurosci. , vol.4 , Issue.4 , pp. 251-265
    • Choquet, D.1    Triller, A.2
  • 82
    • 62649088069 scopus 로고    scopus 로고
    • Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus
    • 10.1128/JB.01513-08 0021-9193
    • Lieber A, Leis A, Kushmaro A, Minsky A and Medalia O 2009 Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus J. Bacteriol. 191 1439-45
    • (2009) J. Bacteriol. , vol.191 , Issue.5 , pp. 1439-1445
    • Lieber, A.1    Leis, A.2    Kushmaro, A.3    Minsky, A.4    Medalia, O.5
  • 85
    • 84856284166 scopus 로고    scopus 로고
    • Brownian needle in dire straits: Stochastic motion of a rod in very confined narrow domains
    • 10.1103/PhysRevE.85.010103 1539-3755 E 010103(R)
    • Holcman D and Schuss Z 2012 Brownian needle in dire straits: stochastic motion of a rod in very confined narrow domains Phys. Rev. E 85 010103(R)
    • (2012) Phys. Rev. , vol.85 , Issue.1
    • Holcman, D.1    Schuss, Z.2
  • 86
    • 14144256353 scopus 로고    scopus 로고
    • Active site restructuring regulates ligand recognition in class A penicillin-binding proteins
    • 10.1073/pnas.0407186102 0027-8424
    • Macheboeuf P, Di Guilmi A M, Job V, Vernet T, Dideberg O and Dessen A 2005 Active site restructuring regulates ligand recognition in class A penicillin-binding proteins Proc. Natl Acad. Sci. USA 102 577-82
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , Issue.3 , pp. 577-582
    • Macheboeuf, P.1    Di Guilmi, A.M.2    Job, V.3    Vernet, T.4    Dideberg, O.5    Dessen, A.6
  • 87
    • 70349972620 scopus 로고    scopus 로고
    • The gated narrow escape time for molecular signaling
    • 10.1103/PhysRevLett.103.148102 0031-9007 148102
    • Reingruber J and Holcman D 2009 The gated narrow escape time for molecular signaling Phys. Rev. Lett. 103 148102
    • (2009) Phys. Rev. Lett. , vol.103 , Issue.14
    • Reingruber, J.1    Holcman, D.2
  • 89
    • 79151480523 scopus 로고    scopus 로고
    • Nuclear geometry and rapid mitosis ensure asymmetric episome segregation in yeast
    • 10.1016/j.cub.2010.12.016 0960-9822
    • Gehlen L R, Nagai S, Shimada K, Meister P, Taddei A and Gasser S M 2011 Nuclear geometry and rapid mitosis ensure asymmetric episome segregation in yeast Curr. Biol. 21 25-33
    • (2011) Curr. Biol. , vol.21 , Issue.1 , pp. 25-33
    • Gehlen, L.R.1    Nagai, S.2    Shimada, K.3    Meister, P.4    Taddei, A.5    Gasser, S.M.6
  • 90
    • 0020394540 scopus 로고
    • Cytoplasmic actin in dendritic spines as a possible mediator of synaptic plasticity
    • Filkova E and Delay R J 1982 Cytoplasmic actin in dendritic spines as a possible mediator of synaptic plasticity J. Cell Biol. 95 350-65
    • (1982) J. Cell Biol. , vol.95 , pp. 350-365
    • Filkova, E.1    Delay, R.J.2
  • 91
    • 61549115643 scopus 로고    scopus 로고
    • Quantifying neurite growth mediated by interactions between secretory vesicles, microtubules and actin networks
    • 10.1016/j.bpj.2008.10.036 0006-3495
    • Tsaneva K, Burgo A, Galli T and Holcman D 2009 Quantifying neurite growth mediated by interactions between secretory vesicles, microtubules and actin networks Biophys. J. 96 840-57
    • (2009) Biophys. J. , vol.96 , Issue.3 , pp. 840-857
    • Tsaneva, K.1    Burgo, A.2    Galli, T.3    Holcman, D.4
  • 93
    • 42649133151 scopus 로고    scopus 로고
    • The first eigenvalue of Laplace operator with small holes
    • 10.1088/1751-8113/41/15/155001 1751-8113 155001
    • Holcman D and Schuss Z 2008 The first eigenvalue of Laplace operator with small holes J. Phys. A: Math. Theor. 41 155001
    • (2008) J. Phys. A: Math. Theor. , vol.41 , Issue.15
    • Holcman, D.1    Schuss, Z.2
  • 94
    • 42749097812 scopus 로고    scopus 로고
    • Diffusion through a cluster of small windows and flux regulation in microdomains
    • 10.1016/j.physleta.2008.02.076 0375-9601 A
    • Holcman D and Schuss Z 2008 Diffusion through a cluster of small windows and flux regulation in microdomains Phys. Lett. A 372 3768-72
    • (2008) Phys. Lett. , vol.372 , Issue.21 , pp. 3768-3772
    • Holcman, D.1    Schuss, Z.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.