-
1
-
-
78650854687
-
Rna helicases at work: Binding and rearranging
-
Jankowsky E (2011) RNA helicases at work: Binding and rearranging. Trends Biochem Sci 36(1)-19-29.
-
(2011)
Trends Biochem Sci
, vol.36
, Issue.1
, pp. 19-29
-
-
Jankowsky, E.1
-
2
-
-
34347385000
-
Rna helicases - One fold for many functions
-
Jankowsky E, Fairman ME (2007) RNA helicases - One fold for many functions. Curr Opin Struct Biol 17(3):316-324.
-
(2007)
Curr Opin Struct Biol
, vol.17
, Issue.3
, pp. 316-324
-
-
Jankowsky, E.1
Fairman, M.E.2
-
3
-
-
79956071179
-
Dead-box proteins as rna helicases and chaperones
-
Jarmoskaite I, Russell R (2011) DEAD-box proteins as RNA helicases and chaperones. Wiley Interdiscip Rev RNA 2(1)-135-152.
-
(2011)
Wiley Interdiscip Rev RNA
, vol.2
, Issue.1
, pp. 135-152
-
-
Jarmoskaite, I.1
Russell, R.2
-
4
-
-
33749139723
-
Dead-box proteins: A family affair - Active and passive players in rnpremodeling
-
Linder P (2006) Dead-box proteins: A family affair - Active and passive players in RNPremodeling. Nucleic Acids Res 34(15):4168-4180.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.15
, pp. 4168-4180
-
-
Linder, P.1
-
5
-
-
70350089113
-
The mechanism of atp-dependent rna unwinding by dead box proteins
-
Hilbert M, Karow AR, Klostermeier D (2009) The mechanism of ATP-dependent RNA unwinding by DEAD box proteins. Biol Chem 390(12)-1237-1250.
-
(2009)
Biol Chem
, vol.390
, Issue.12
, pp. 1237-1250
-
-
Hilbert, M.1
Karow, A.R.2
Klostermeier, D.3
-
6
-
-
0027301893
-
Dbpa: A dead box protein specifically activated by 23s rrna
-
Fuller-Pace FV, Nicol SM, Reid AD, Lane DP (1993) DbpA: A DEAD box protein specifically activated by 23s rRNA. EMBO J 12(9):3619-3626.
-
(1993)
EMBO J
, vol.12
, Issue.9
, pp. 3619-3626
-
-
Fuller-Pace, F.V.1
Nicol, S.M.2
Reid, A.D.3
Lane, D.P.4
-
7
-
-
33749125440
-
Dead-box rna helicases in escherichia coli
-
Iost I, Dreyfus M (2006) DEAD-box RNA helicases in Escherichia coli. Nucleic Acids Res 34(15):4189-4197.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.15
, pp. 4189-4197
-
-
Iost, I.1
Dreyfus, M.2
-
8
-
-
71049181356
-
A dominant negative mutant of the e. Coli rna helicase dbpa blocks assembly of the 50s ribosomal subunit
-
Sharpe Elles LM, Sykes MT, Williamson JR, Uhlenbeck OC (2009) A dominant negative mutant of the E. coli RNA helicase DbpA blocks assembly of the 50S ribosomal subunit. Nucleic Acids Res 37(19):6503-6514.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.19
, pp. 6503-6514
-
-
Sharpe Elles, L.M.1
Sykes, M.T.2
Williamson, J.R.3
Uhlenbeck, O.C.4
-
9
-
-
0032387820
-
Kinetic analysis of the rna-dependent adenosinetriphosphatase activity of dbpa, an escherichia coli dead protein specific for 23s ribosomal rna
-
Tsu CA, Uhlenbeck OC (1998) Kinetic analysis of the RNA-dependent adenosinetriphosphatase activity of DbpA, an Escherichia coli DEAD protein specific for 23S ribosomal RNA. Biochemistry 37(48)-16989-16996.
-
(1998)
Biochemistry
, vol.37
, Issue.48
, pp. 16989-16996
-
-
Tsu, C.A.1
Uhlenbeck, O.C.2
-
10
-
-
0036927393
-
The carboxy-terminal domain of the dexdh protein yxin is sufficient to confer specificity for 23s rrna
-
Kossen K, Karginov FV, Uhlenbeck OC (2002) The carboxy-terminal domain of the DExDH protein YxiN is sufficient to confer specificity for 23S rRNA. J Mol Biol 324(4): 625-636.
-
(2002)
J Mol Biol
, vol.324
, Issue.4
, pp. 625-636
-
-
Kossen, K.1
Karginov, F.V.2
Uhlenbeck, O.C.3
-
11
-
-
69749126977
-
Structure of the yeast dead box protein mss116p reveals two wedges that crimp rna
-
Del Campo M, Lambowitz AM (2009) Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA. Mol Cell 35(5):598-609.
-
(2009)
Mol Cell
, vol.35
, Issue.5
, pp. 598-609
-
-
Del Campo, M.1
Lambowitz, A.M.2
-
12
-
-
62049084648
-
The mrna export protein dbp5 binds rna and the cytoplasmic nucleoporin nup214 in a mutually exclusive manner
-
von Moeller H, Basquin C, Conti E (2009) The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner. Nat Struct Mol Biol 16(3):247-254.
-
(2009)
Nat Struct Mol Biol
, vol.16
, Issue.3
, pp. 247-254
-
-
Von Moeller, H.1
Basquin, C.2
Conti, E.3
-
13
-
-
33749332762
-
Structure of the exon junction core complex with a trapped dead-box atpase bound to rna
-
Andersen CB, et al. (2006) Structure of the exon junction core complex with a trapped DEAD-box ATPase bound to RNA. Science 313(5795)-1968-1972.
-
(2006)
Science
, vol.313
, Issue.5795
, pp. 1968-1972
-
-
Andersen, C.B.1
-
14
-
-
33646017369
-
Structural basis for rna unwinding by the dead-box protein drosophila vasa
-
Sengoku T, Nureki O, Nakamura A, Kobayashi S, Yokoyama S (2006) Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa. Cell 125(2):287-300.
-
(2006)
Cell
, vol.125
, Issue.2
, pp. 287-300
-
-
Sengoku, T.1
Nureki, O.2
Nakamura, A.3
Kobayashi, S.4
Yokoyama, S.5
-
15
-
-
33747182255
-
The crystal structure of the exon junction complex reveals how it maintains a stable grip on mrna
-
Bono F, Ebert J, Lorentzen E, Conti E (2006) The crystal structure of the exon junction complex reveals how it maintains a stable grip on mRNA. Cell 126(4):713-725.
-
(2006)
Cell
, vol.126
, Issue.4
, pp. 713-725
-
-
Bono, F.1
Ebert, J.2
Lorentzen, E.3
Conti, E.4
-
16
-
-
67449105353
-
The dexd/h-box rna helicase ddx19 is regulated by an alphahelical switch
-
Collins R, et al. (2009) The DEXD/H-box RNA helicase DDX19 is regulated by an alphahelical switch. J Biol Chem 284(16)-10296-10300.
-
(2009)
J Biol Chem
, vol.284
, Issue.16
, pp. 10296-10300
-
-
Collins, R.1
-
17
-
-
77958568836
-
Comparative structural analysis of human dead-box rna helicases
-
pii
-
Schütz P, et al. (2010) Comparative structural analysis of human DEAD-box RNA helicases. PLoS ONE 5(9):pii: e12791.
-
(2010)
PLoS ONE
, vol.5
, Issue.9
-
-
Schütz, P.1
-
19
-
-
81155154337
-
Gle1 is a multifunctional dead-box protein regulator that modulates ded1 in translation initiation
-
Bolger TA, Wente SR (2011) Gle1 is a multifunctional DEAD-box protein regulator that modulates Ded1 in translation initiation. J Biol Chem 286(46):39750-39759.
-
(2011)
J Biol Chem
, vol.286
, Issue.46
, pp. 39750-39759
-
-
Bolger, T.A.1
Wente, S.R.2
-
20
-
-
0042666838
-
Solution structure and rna interactions of the rna recognition motif from eukaryotic translation initiation factor 4b
-
Fleming K, et al. (2003) Solution structure and RNA interactions of the RNA recognition motif from eukaryotic translation initiation factor 4B. Biochemistry 42(30):8966-8975.
-
(2003)
Biochemistry
, vol.42
, Issue.30
, pp. 8966-8975
-
-
Fleming, K.1
-
21
-
-
33745406566
-
The nucleolar protein esf2 interacts directly with the dexd/h box rna helicase, dbp8, to stimulate atp hydrolysis
-
Granneman S, et al. (2006) The nucleolar protein Esf2 interacts directly with the DExD/H box RNA helicase, Dbp8, to stimulate ATP hydrolysis. Nucleic Acids Res 34(10): 3189-3199.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.10
, pp. 3189-3199
-
-
Granneman, S.1
-
22
-
-
72449189579
-
The atpase and helicase activities of prp43p are stimulated by the g-patch protein pfa1p during yeast ribosome biogenesis
-
Lebaron S, et al. (2009) The ATPase and helicase activities of Prp43p are stimulated by the G-patch protein Pfa1p during yeast ribosome biogenesis. EMBO J 28(24): 3808-3819.
-
(2009)
EMBO J
, vol.28
, Issue.24
, pp. 3808-3819
-
-
Lebaron, S.1
-
23
-
-
70449656291
-
Rna helicase prp43 and its co-factor pfa1 promote 20 to 18 s rrna processing catalyzed by the endonuclease nob1
-
Pertschy B, et al. (2009) RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1. J Biol Chem 284(50): 35079-35091.
-
(2009)
J Biol Chem
, vol.284
, Issue.50
, pp. 35079-35091
-
-
Pertschy, B.1
-
24
-
-
0035903136
-
Modulation of the helicase activity of eif4a by eif4b, eif4h, and eif4f
-
Rogers GW, Jr., Richter NJ, Lima WF, Merrick WC (2001) Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F. J Biol Chem 276(33):30914-30922.
-
(2001)
J Biol Chem
, vol.276
, Issue.33
, pp. 30914-30922
-
-
Rogers Jr., G.W.1
Richter, N.J.2
Lima, W.F.3
Merrick, W.C.4
-
25
-
-
36849009618
-
Dynamic interactions of ntr1-ntr2 with prp43 and with u5 govern the recruitment of prp43 to mediate spliceosome disassembly
-
Tsai RT, et al. (2007) Dynamic interactions of Ntr1-Ntr2 with Prp43 and with U5 govern the recruitment of Prp43 to mediate spliceosome disassembly. Mol Cell Biol 27(23): 8027-8037.
-
(2007)
Mol Cell Biol
, vol.27
, Issue.23
, pp. 8027-8037
-
-
Tsai, R.T.1
-
26
-
-
0033580840
-
Ded1p, a dead-box protein required for translation initiation in saccharomyces cerevisiae, is an rna helicase
-
Iost I, Dreyfus M, Linder P (1999) Ded1p, a DEAD-box protein required for translation initiation in Saccharomyces cerevisiae, is an RNA helicase. J Biol Chem 274(25): 17677-17683.
-
(1999)
J Biol Chem
, vol.274
, Issue.25
, pp. 17677-17683
-
-
Iost, I.1
Dreyfus, M.2
Linder, P.3
-
27
-
-
80052965200
-
Duplex unwinding and atpase activities of the dead-box helicase eif4a are coupled by eif4g and eif4b
-
Özeş AR, Feoktistova K, Avanzino BC, Fraser CS (2011) Duplex unwinding and ATPase activities of the DEAD-box helicase eIF4A are coupled by eIF4G and eIF4B. J Mol Biol 412(4):674-687.
-
(2011)
J Mol Biol
, vol.412
, Issue.4
, pp. 674-687
-
-
Özeş, A.R.1
Feoktistova, K.2
Avanzino, B.C.3
Fraser, C.S.4
-
28
-
-
47749123500
-
Crystal structure of the yeast eif4a-eif4g complex: An rnahelicase controlled by protein-protein interactions
-
Schütz P, et al. (2008) Crystal structure of the yeast eIF4A-eIF4G complex: An RNAhelicase controlled by protein-protein interactions. Proc Natl Acad Sci USA 105(28): 9564-9569.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.28
, pp. 9564-9569
-
-
Schütz, P.1
-
29
-
-
43249100378
-
A conserved phenylalanine of motif iv in superfamily 2 helicases is required for cooperative, atpdependent binding of rna substrates in dead-box proteins
-
Banroques J, Cordin O, Doère M, Linder P, Tanner NK (2008) A conserved phenylalanine of motif IV in superfamily 2 helicases is required for cooperative, ATPdependent binding of RNA substrates in DEAD-box proteins. Mol Cell Biol 28(10): 3359-3371.
-
(2008)
Mol Cell Biol
, vol.28
, Issue.10
, pp. 3359-3371
-
-
Banroques, J.1
Cordin, O.2
Doère, M.3
Linder, P.4
Tanner, N.K.5
-
30
-
-
33646181578
-
Discriminatory rnp remodeling by the dead-box protein ded1
-
Bowers HA, et al. (2006) Discriminatory RNP remodeling by the DEAD-box protein DED1. RNA 12(5):903-912.
-
(2006)
RNA
, vol.12
, Issue.5
, pp. 903-912
-
-
Bowers, H.A.1
-
31
-
-
33845738802
-
Involvement of dead-box proteins in group i and group ii intron splicing. Biochemical characterization of mss116p, atp hydrolysis-dependent and -independent mechanisms, and general rna chaperone activity
-
Halls C, et al. (2007) Involvement of DEAD-box proteins in group I and group II intron splicing. Biochemical characterization of Mss116p, ATP hydrolysis-dependent and -independent mechanisms, and general RNA chaperone activity. J Mol Biol 365(3):835-855.
-
(2007)
J Mol Biol
, vol.365
, Issue.3
, pp. 835-855
-
-
Halls, C.1
-
32
-
-
26644450709
-
Atp- and adp-dependent modulation of rna unwinding and strand annealing activities by the dead-box protein ded1
-
Yang Q, Jankowsky E (2005) ATP- and ADP-dependent modulation of RNA unwinding and strand annealing activities by the DEAD-box protein DED1. Biochemistry 44(41): 13591-13601.
-
(2005)
Biochemistry
, vol.44
, Issue.41
, pp. 13591-13601
-
-
Yang, Q.1
Jankowsky, E.2
-
33
-
-
33750593917
-
The dead-box protein ded1 unwinds rna duplexes by a mode distinct from translocating helicases
-
Yang Q, Jankowsky E (2006) The DEAD-box protein Ded1 unwinds RNA duplexes by a mode distinct from translocating helicases. Nat Struct Mol Biol 13(11):981-986.
-
(2006)
Nat Struct Mol Biol
, vol.13
, Issue.11
, pp. 981-986
-
-
Yang, Q.1
Jankowsky, E.2
-
34
-
-
0033578620
-
Interaction of translation initiation factor eif4g with eif4a in the yeast saccharomyces cerevisiae
-
Dominguez D, Altmann M, Benz J, Baumann U, Trachsel H (1999) Interaction of translation initiation factor eIF4G with eIF4A in the yeast Saccharomyces cerevisiae. J Biol Chem 274(38):26720-26726.
-
(1999)
J Biol Chem
, vol.274
, Issue.38
, pp. 26720-26726
-
-
Dominguez, D.1
Altmann, M.2
Benz, J.3
Baumann, U.4
Trachsel, H.5
-
35
-
-
79953675393
-
Eif4g stimulates the activity of the dead box protein eif4a by a conformational guidance mechanism
-
Hilbert M, Kebbel F, Gubaev A, Klostermeier D (2011) eIF4G stimulates the activity of the DEAD box protein eIF4A by a conformational guidance mechanism. Nucleic Acids Res 39(6):2260-2270.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.6
, pp. 2260-2270
-
-
Hilbert, M.1
Kebbel, F.2
Gubaev, A.3
Klostermeier, D.4
-
36
-
-
0032562221
-
The dead box protein eif4a. 2. A cycle of nucleotide and rna-dependent conformational changes
-
Lorsch JR, Herschlag D (1998) The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes. Biochemistry 37(8):2194-2206.
-
(1998)
Biochemistry
, vol.37
, Issue.8
, pp. 2194-2206
-
-
Lorsch, J.R.1
Herschlag, D.2
-
37
-
-
0032562239
-
The dead box protein eif4a. 1. A minimal kinetic and thermodynamic framework reveals coupled binding of rna and nucleotide
-
Lorsch JR, Herschlag D (1998) The DEAD box protein eIF4A. 1. A minimal kinetic and thermodynamic framework reveals coupled binding of RNA and nucleotide. Biochemistry 37(8):2180-2193.
-
(1998)
Biochemistry
, vol.37
, Issue.8
, pp. 2180-2193
-
-
Lorsch, J.R.1
Herschlag, D.2
-
38
-
-
0040142238
-
Biochemical and kinetic characterization of the rna helicase activity of eukaryotic initiation factor 4a
-
Rogers GW, Jr., Richter NJ, Merrick WC (1999) Biochemical and kinetic characterization of the RNA helicase activity of eukaryotic initiation factor 4A. J Biol Chem 274(18): 12236-12244.
-
(1999)
J Biol Chem
, vol.274
, Issue.18
, pp. 12236-12244
-
-
Rogers Jr., G.W.1
Richter, N.J.2
Merrick, W.C.3
-
39
-
-
79951545973
-
The roles of s1 rna-binding domains in rrp5's interactions with pre-rrna
-
Young CL, Karbstein K (2011) The roles of S1 RNA-binding domains in Rrp5's interactions with pre-rRNA. RNA 17(3):512-521.
-
(2011)
RNA
, vol.17
, Issue.3
, pp. 512-521
-
-
Young, C.L.1
Karbstein, K.2
-
40
-
-
0030911550
-
Rok1p is a putative rna helicase required for rrna processing
-
Venema J, Bousquet-Antonelli C, Gelugne JP, Caizergues-Ferrer M, Tollervey D (1997) Rok1p is a putative RNA helicase required for rRNA processing. Mol Cell Biol 17(6): 3398-3407.
-
(1997)
Mol Cell Biol
, vol.17
, Issue.6
, pp. 3398-3407
-
-
Venema, J.1
Bousquet-Antonelli, C.2
Gelugne, J.P.3
Caizergues-Ferrer, M.4
Tollervey, D.5
-
41
-
-
0029853905
-
Rrp5 is required for formation of both 18s and 5.8s rrna in yeast
-
Venema J, Tollervey D (1996) RRP5 is required for formation of both 18S and 5.8S rRNA in yeast. EMBO J 15(20):5701-5714.
-
(1996)
EMBO J
, vol.15
, Issue.20
, pp. 5701-5714
-
-
Venema, J.1
Tollervey, D.2
-
42
-
-
0031761922
-
Two mutant forms of the s1/tprcontaining protein rrp5p affect the 18s rrna synthesis in saccharomyces cerevisiae
-
Torchet C, Jacq C, Hermann-Le Denmat S (1998) Two mutant forms of the S1/TPRcontaining protein Rrp5p affect the 18S rRNA synthesis in Saccharomyces cerevisiae. RNA 4(12)-1636-1652.
-
(1998)
RNA
, vol.4
, Issue.12
, pp. 1636-1652
-
-
Torchet, C.1
Jacq, C.2
Hermann-Le Denmat, S.3
-
43
-
-
78650413785
-
An rna conformational switch regulates pre-18s rrna cleavage
-
Lamanna AC, Karbstein K (2011) An RNA conformational switch regulates pre-18S rRNA cleavage. J Mol Biol 405(1):3-17.
-
(2011)
J Mol Biol
, vol.405
, Issue.1
, pp. 3-17
-
-
Lamanna, A.C.1
Karbstein, K.2
-
44
-
-
0028998441
-
Tetratrico peptide repeat interactions: To tpr or not to tpr?
-
Lamb JR, Tugendreich S, Hieter P (1995) Tetratrico peptide repeat interactions: To TPR or not to TPR? Trends Biochem Sci 20(7):257-259.
-
(1995)
Trends Biochem Sci
, vol.20
, Issue.7
, pp. 257-259
-
-
Lamb, J.R.1
Tugendreich, S.2
Hieter, P.3
-
45
-
-
10244245450
-
U3 snornp and rrp5p associate independently with saccharomyces cerevisiae 35s pre-rrna, but rrp5p is essential for association of rok1p
-
Vos HR, Bax R, Faber AW, Vos JC, Raué HA (2004) U3 snoRNP and Rrp5p associate independently with Saccharomyces cerevisiae 35S pre-rRNA, but Rrp5p is essential for association of Rok1p. Nucleic Acids Res 32(19):5827-5833.
-
(2004)
Nucleic Acids Res
, vol.32
, Issue.19
, pp. 5827-5833
-
-
Vos, H.R.1
Bax, R.2
Faber, A.W.3
Vos, J.C.4
Raué, H.A.5
-
46
-
-
0032983093
-
The roles of rrp5p in the synthesis of yeast 18s and 5.8s rrna can be functionally and physically separated
-
Eppens NA, Rensen S, Granneman S, Raué HA, Venema J (1999) The roles of Rrp5p in the synthesis of yeast 18S and 5.8S rRNA can be functionally and physically separated. RNA 5(6):779-793.
-
(1999)
RNA
, vol.5
, Issue.6
, pp. 779-793
-
-
Eppens, N.A.1
Rensen, S.2
Granneman, S.3
Raué, H.A.4
Venema, J.5
-
47
-
-
0036800015
-
Deletions in the s1 domain of rrp5p cause processing at a novel site in its1 of yeast pre-rrna that depends on rex4p
-
Eppens NA, et al. (2002) Deletions in the S1 domain of Rrp5p cause processing at a novel site in ITS1 of yeast pre-rRNA that depends on Rex4p. Nucleic Acids Res 30(19): 4222-4231.
-
(2002)
Nucleic Acids Res
, vol.30
, Issue.19
, pp. 4222-4231
-
-
Eppens, N.A.1
-
48
-
-
33745742173
-
Activation of the dexd/h-box protein dbp5 by the nuclearpore protein gle1 and its coactivator insp6 is required for mrna export
-
Weirich CS, et al. (2006) Activation of the DExD/H-box protein Dbp5 by the nuclearpore protein Gle1 and its coactivator InsP6 is required for mRNA export. Nat Cell Biol 8(7):668-676.
-
(2006)
Nat Cell Biol
, vol.8
, Issue.7
, pp. 668-676
-
-
Weirich, C.S.1
-
49
-
-
2442708866
-
Dbp9p, a member of the dead box protein family, exhibits dna helicase activity
-
Kikuma T, et al. (2004) Dbp9p, a member of the DEAD box protein family, exhibits DNA helicase activity. J Biol Chem 279(20):20692-20698.
-
(2004)
J Biol Chem
, vol.279
, Issue.20
, pp. 20692-20698
-
-
Kikuma, T.1
-
50
-
-
0024356599
-
Dissociation of double-stranded polynucleotide helical structures by eukaryotic initiation factors, as revealed by a novel assay
-
Lawson TG, et al. (1989) Dissociation of double-stranded polynucleotide helical structures by eukaryotic initiation factors, as revealed by a novel assay. Biochemistry 28(11):4729-4734.
-
(1989)
Biochemistry
, vol.28
, Issue.11
, pp. 4729-4734
-
-
Lawson, T.G.1
-
51
-
-
2942754127
-
Studies on three e. Coli dead-box helicases point to an unwinding mechanism different from that of model dna helicases
-
Bizebard T, Ferlenghi I, Iost I, Dreyfus M (2004) Studies on three E. coli DEAD-box helicases point to an unwinding mechanism different from that of model DNA helicases. Biochemistry 43(24):7857-7866.
-
(2004)
Biochemistry
, vol.43
, Issue.24
, pp. 7857-7866
-
-
Bizebard, T.1
Ferlenghi, I.2
Iost, I.3
Dreyfus, M.4
-
52
-
-
0037066739
-
The atpase, rna unwinding, and rna binding activities of recombinant p68 rna helicase
-
Huang Y, Liu ZR (2002) The ATPase, RNA unwinding, and RNA binding activities of recombinant p68 RNA helicase. J Biol Chem 277(15)-12810-12815.
-
(2002)
J Biol Chem
, vol.277
, Issue.15
, pp. 12810-12815
-
-
Huang, Y.1
Liu, Z.R.2
-
53
-
-
2542510120
-
Rearrangement of structured rna via branch migration structures catalysed by the highly related dead-box proteins p68 and p72
-
Rössler OG, Straka A, Stahl H (2001) Rearrangement of structured RNA via branch migration structures catalysed by the highly related DEAD-box proteins p68 and p72. Nucleic Acids Res 29(10):2088-2096.
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.10
, pp. 2088-2096
-
-
Rössler, O.G.1
Straka, A.2
Stahl, H.3
-
54
-
-
14244260321
-
Characterization of the atpase and unwinding activities of the yeast dead-box protein has1p and the analysis of the roles of the conserved motifs
-
Rocak S, Emery B, Tanner NK, Linder P (2005) Characterization of the ATPase and unwinding activities of the yeast DEAD-box protein Has1p and the analysis of the roles of the conserved motifs. Nucleic Acids Res 33(3):999-1009.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.3
, pp. 999-1009
-
-
Rocak, S.1
Emery, B.2
Tanner, N.K.3
Linder, P.4
-
55
-
-
84871267065
-
Duplex destabilization by four ribosomal dead-box proteins
-
Garcia I, Albring MJ, Uhlenbeck OC (2012) Duplex destabilization by four ribosomal DEAD-box proteins. Biochemistry 51(50)-10109-10118.
-
(2012)
Biochemistry
, vol.51
, Issue.50
, pp. 10109-10118
-
-
Garcia, I.1
Albring, M.J.2
Uhlenbeck, O.C.3
-
56
-
-
33749130843
-
Remodeling of ribonucleoprotein complexes with dexh/d rna helicases
-
Jankowsky E, Bowers H (2006) Remodeling of ribonucleoprotein complexes with DExH/D RNA helicases. Nucleic Acids Res 34(15):4181-4188.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.15
, pp. 4181-4188
-
-
Jankowsky, E.1
Bowers, H.2
-
57
-
-
0035808566
-
Active disruption of an rnaprotein interaction by a dexh/d rna helicase
-
Jankowsky E, Gross CH, Shuman S, Pyle AM (2001) Active disruption of an RNAprotein interaction by a DExH/D RNA helicase. Science 291(5501)-121-125.
-
(2001)
Science
, vol.291
, Issue.5501
, pp. 121-125
-
-
Jankowsky, E.1
Gross, C.H.2
Shuman, S.3
Pyle, A.M.4
-
58
-
-
39149089317
-
Structural insights into the exon junction complex
-
Le Hir H, Andersen GR (2008) Structural insights into the exon junction complex. Curr Opin Struct Biol 18(1)-112-119.
-
(2008)
Curr Opin Struct Biol
, vol.18
, Issue.1
, pp. 112-119
-
-
Le Hir, H.1
Andersen, G.R.2
-
59
-
-
79956300418
-
The dbp5 cycle at the nuclear pore complex during mrna export ii: Nucleotide cycling and mrnp remodeling by dbp5 are controlled by nup159 and gle1
-
Noble KN, et al. (2011) The Dbp5 cycle at the nuclear pore complex during mRNA export II: Nucleotide cycling and mRNP remodeling by Dbp5 are controlled by Nup159 and Gle1. Genes Dev 25(10)-1065-1077.
-
(2011)
Genes Dev
, vol.25
, Issue.10
, pp. 1065-1077
-
-
Noble, K.N.1
-
60
-
-
84867064003
-
Structural basis for rna-duplex recognition and unwinding by the dead-box helicase mss116p
-
Mallam AL, Del Campo M, Gilman B, Sidote DJ, Lambowitz AM (2012) Structural basis for RNA-duplex recognition and unwinding by the DEAD-box helicase Mss116p. Nature 490(7418)-121-125.
-
(2012)
Nature
, vol.490
, Issue.7418
, pp. 121-125
-
-
Mallam, A.L.1
Del Campo, M.2
Gilman, B.3
Sidote, D.J.4
Lambowitz, A.M.5
-
61
-
-
33750936780
-
Nonspecific binding to structured rna and preferential unwinding of an exposed helix by the cyt-19 protein, a dead-box rna chaperone
-
Tijerina P, Bhaskaran H, Russell R (2006) Nonspecific binding to structured RNA and preferential unwinding of an exposed helix by the CYT-19 protein, a DEAD-box RNA chaperone. Proc Natl Acad Sci USA 103(45)-16698-16703.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.45
, pp. 16698-16703
-
-
Tijerina, P.1
Bhaskaran, H.2
Russell, R.3
-
62
-
-
78549252106
-
Time-resolved measurements of intracellular atp in the yeast saccharomyces cerevisiae using a new type of nanobiosensor
-
Ozalp VC, Pedersen TR, Nielsen LJ, Olsen LF (2010) Time-resolved measurements of intracellular ATP in the yeast Saccharomyces cerevisiae using a new type of nanobiosensor. J Biol Chem 285(48):37579-37588.
-
(2010)
J Biol Chem
, vol.285
, Issue.48
, pp. 37579-37588
-
-
Ozalp, V.C.1
Pedersen, T.R.2
Nielsen, L.J.3
Olsen, L.F.4
-
63
-
-
0035282868
-
Characterization and mutational analysis of yeast dbp8p, a putative rna helicase involved in ribosome biogenesis
-
Daugeron MC, Linder P (2001) Characterization and mutational analysis of yeast Dbp8p, a putative RNA helicase involved in ribosome biogenesis. Nucleic Acids Res 29(5)-1144-1155.
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.5
, pp. 1144-1155
-
-
Daugeron, M.C.1
Linder, P.2
-
64
-
-
84869845792
-
A structure-based model of rig-i activation
-
Kolakofsky D, Kowalinski E, Cusack S (2012) A structure-based model of RIG-I activation. RNA 18(12):2118-2127.
-
(2012)
RNA
, vol.18
, Issue.12
, pp. 2118-2127
-
-
Kolakofsky, D.1
Kowalinski, E.2
Cusack, S.3
-
65
-
-
79956302113
-
Human eif4aiii interacts with an eif4glike partner nom1 revealing an evolutionarily conserved function outside the exon junction complex
-
Alexandrov A, Colognori D, Steitz JA (2011) Human eIF4AIII interacts with an eIF4Glike partner, NOM1, revealing an evolutionarily conserved function outside the exon junction complex. Genes Dev 25(10)-1078-1090.
-
(2011)
Genes Dev
, vol.25
, Issue.10
, pp. 1078-1090
-
-
Alexandrov, A.1
Colognori, D.2
Steitz, J.A.3
-
66
-
-
79954598438
-
A conserved mechanism of dead-box atpase activation by nucleoporins and insp6 in mrna export
-
Montpetit B, et al. (2011) A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export. Nature 472(7342):238-242.
-
(2011)
Nature
, vol.472
, Issue.7342
, pp. 238-242
-
-
Montpetit, B.1
-
67
-
-
0033569797
-
The rna export factor gle1p is located on the cytoplasmic fibrils of the npc and physically interacts with the fg-nucleoporin rip1p, the deadbox protein rat8p/dbp5p and a new protein ymr 255p
-
Strahm Y, et al. (1999) The RNA export factor Gle1p is located on the cytoplasmic fibrils of the NPC and physically interacts with the FG-nucleoporin Rip1p, the DEADbox protein Rat8p/Dbp5p and a new protein Ymr 255p. EMBO J 18(20):5761-5777.
-
(1999)
EMBO J
, vol.18
, Issue.20
, pp. 5761-5777
-
-
Strahm, Y.1
-
68
-
-
79958267118
-
The rna helicase mtr4p modulates polyadenylation in the tramp complex
-
Jia H, et al. (2011) The RNA helicase Mtr4p modulates polyadenylation in the TRAMP complex. Cell 145(6):890-901.
-
(2011)
Cell
, vol.145
, Issue.6
, pp. 890-901
-
-
Jia, H.1
-
69
-
-
58149231008
-
Atp-dependent unwinding of u4/u6 snrnas by the brr2 helicase requires the c terminus of prp8
-
Maeder C, Kutach AK, Guthrie C (2009) ATP-dependent unwinding of U4/U6 snRNAs by the Brr2 helicase requires the C terminus of Prp8. Nat Struct Mol Biol 16(1):42-48.
-
(2009)
Nat Struct Mol Biol
, vol.16
, Issue.1
, pp. 42-48
-
-
Maeder, C.1
Kutach, A.K.2
Guthrie, C.3
-
70
-
-
69149090973
-
Common design principles in the spliceosomal rna helicase brr2 and in the hel308 dna helicase
-
Pena V, et al. (2009) Common design principles in the spliceosomal RNA helicase Brr2 and in the Hel308 DNA helicase. Mol Cell 35(4):454-466.
-
(2009)
Mol Cell
, vol.35
, Issue.4
, pp. 454-466
-
-
Pena, V.1
-
71
-
-
34548842257
-
Ntr1 activates the prp43 helicase to trigger release of lariat-intron from the spliceosome
-
Tanaka N, Aronova A, Schwer B (2007) Ntr1 activates the Prp43 helicase to trigger release of lariat-intron from the spliceosome. Genes Dev 21(18):2312-2325.
-
(2007)
Genes Dev
, vol.21
, Issue.18
, pp. 2312-2325
-
-
Tanaka, N.1
Aronova, A.2
Schwer, B.3
-
72
-
-
84857590342
-
Dbp5, gle1-ip6 and nup159: A working model for mrnp export
-
Folkmann AW, Noble KN, Cole CN, Wente SR (2011) Dbp5, Gle1-IP6 and Nup159: A working model for mRNP export. Nucleus 2(6):540-548.
-
(2011)
Nucleus
, vol.2
, Issue.6
, pp. 540-548
-
-
Folkmann, A.W.1
Noble, K.N.2
Cole, C.N.3
Wente, S.R.4
-
73
-
-
24944469031
-
Structural basis for the enhancement of eif4a helicase activity by eif4g
-
Oberer M, Marintchev A, Wagner G (2005) Structural basis for the enhancement of eIF4A helicase activity by eIF4G. Genes Dev 19(18):2212-2223.
-
(2005)
Genes Dev
, vol.19
, Issue.18
, pp. 2212-2223
-
-
Oberer, M.1
Marintchev, A.2
Wagner, G.3
-
74
-
-
79952686670
-
Molecular mechanisms for the rna-dependent atpase activity of upf1 and its regulation by upf2
-
Chakrabarti S, et al. (2011) Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2. Mol Cell 41(6):693-703.
-
(2011)
Mol Cell
, vol.41
, Issue.6
, pp. 693-703
-
-
Chakrabarti, S.1
-
75
-
-
84862000545
-
Specific domains in yeast translation initiation factor eif4g strongly bias rna unwinding activity of the eif4f complex toward duplexes with 5′-overhangs
-
Rajagopal V, Park EH, Hinnebusch AG, Lorsch JR (2012) Specific domains in yeast translation initiation factor eIF4G strongly bias RNA unwinding activity of the eIF4F complex toward duplexes with 5′-overhangs. J Biol Chem 287(24):20301-20312.
-
(2012)
J Biol Chem
, vol.287
, Issue.24
, pp. 20301-20312
-
-
Rajagopal, V.1
Park, E.H.2
Hinnebusch, A.G.3
Lorsch, J.R.4
-
76
-
-
0030671163
-
Prp43: An rna helicase-like factor involved in spliceosome disassembly
-
Arenas JE, Abelson JN (1997) Prp43: An RNA helicase-like factor involved in spliceosome disassembly. Proc Natl Acad Sci USA 94(22)-11798-11802.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, Issue.22
, pp. 11798-11802
-
-
Arenas, J.E.1
Abelson, J.N.2
-
77
-
-
30644465812
-
Prp43p is a deah-box spliceosome disassembly factor essential for ribosome biogenesis
-
Combs DJ, Nagel RJ, Ares M, Jr., Stevens SW (2006) Prp43p is a DEAH-box spliceosome disassembly factor essential for ribosome biogenesis. Mol Cell Biol 26(2):523-534.
-
(2006)
Mol Cell Biol
, vol.26
, Issue.2
, pp. 523-534
-
-
Combs, D.J.1
Nagel, R.J.2
Ares Jr., M.3
Stevens, S.W.4
-
78
-
-
30644478744
-
The splicing factor prp43p, a deah box atpase, functions in ribosome biogenesis
-
Leeds NB, Small EC, Hiley SL, Hughes TR, Staley JP (2006) The splicing factor Prp43p, a DEAH box ATPase, functions in ribosome biogenesis. Mol Cell Biol 26(2):513-522.
-
(2006)
Mol Cell Biol
, vol.26
, Issue.2
, pp. 513-522
-
-
Leeds, N.B.1
Small, E.C.2
Hiley, S.L.3
Hughes, T.R.4
Staley, J.P.5
-
79
-
-
29144515824
-
Spliceosome disassembly catalyzed by prp43 and its associated components ntr1 and ntr2
-
Tsai RT, et al. (2005) Spliceosome disassembly catalyzed by Prp43 and its associated components Ntr1 and Ntr2. Genes Dev 19(24):2991-3003.
-
(2005)
Genes Dev
, vol.19
, Issue.24
, pp. 2991-3003
-
-
Tsai, R.T.1
-
80
-
-
70449686545
-
Prp43 bound at different sites on the pre-rrna performs distinct functions in ribosome synthesis
-
Bohnsack MT, et al. (2009) Prp43 bound at different sites on the pre-rRNA performs distinct functions in ribosome synthesis. Mol Cell 36(4):583-592.
-
(2009)
Mol Cell
, vol.36
, Issue.4
, pp. 583-592
-
-
Bohnsack, M.T.1
-
81
-
-
77954958169
-
Prp43p contains a processive helicase structural architecture with a specific regulatory domain
-
Walbott H, et al. (2010) Prp43p contains a processive helicase structural architecture with a specific regulatory domain. EMBO J 29(13):2194-2204.
-
(2010)
EMBO J
, vol.29
, Issue.13
, pp. 2194-2204
-
-
Walbott, H.1
-
82
-
-
0029040719
-
Antisense snornas: A family of nucleolar rnas with long complementarities to rrna
-
Bachellerie JP, et al. (1995) Antisense snoRNAs: A family of nucleolar RNAs with long complementarities to rRNA. Trends Biochem Sci 20(7):261-264.
-
(1995)
Trends Biochem Sci
, vol.20
, Issue.7
, pp. 261-264
-
-
Bachellerie, J.P.1
-
83
-
-
2942610793
-
Rna structure and function in c/d and h/aca s (no)rnps
-
Henras AK, Dez C, Henry Y (2004) RNA structure and function in C/D and H/ACA s (no)RNPs. Curr Opin Struct Biol 14(3):335-343.
-
(2004)
Curr Opin Struct Biol
, vol.14
, Issue.3
, pp. 335-343
-
-
Henras, A.K.1
Dez, C.2
Henry, Y.3
-
85
-
-
0032498230
-
The enhanceosome and transcriptional synergy
-
Carey M (1998) The enhanceosome and transcriptional synergy. Cell 92(1):5-8.
-
(1998)
Cell
, vol.92
, Issue.1
, pp. 5-8
-
-
Carey, M.1
-
87
-
-
0031466305
-
Cyclin-dependent kinases: Engines, clocks, and microprocessors
-
Morgan DO (1997) Cyclin-dependent kinases: Engines, clocks, and microprocessors. Annu Rev Cell Dev Biol 13:261-291.
-
(1997)
Annu Rev Cell Dev Biol
, vol.13
, pp. 261-291
-
-
Morgan, D.O.1
-
89
-
-
27944487604
-
An essential gtpase promotes assembly of preribosomal rna processing complexes
-
Karbstein K, Jonas S, Doudna JA (2005) An essential GTPase promotes assembly of preribosomal RNA processing complexes. Mol Cell 20(4):633-643.
-
(2005)
Mol Cell
, vol.20
, Issue.4
, pp. 633-643
-
-
Karbstein, K.1
Jonas, S.2
Doudna, J.A.3
-
90
-
-
70149120737
-
Nob1 binds the single-stranded cleavage site d at the 3′-end of 18s rrna with its pin domain
-
Lamanna AC, Karbstein K (2009) Nob1 binds the single-stranded cleavage site D at the 3′-end of 18S rRNA with its PIN domain. Proc Natl Acad Sci USA 106(34)-14259-14264.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.34
, pp. 14259-14264
-
-
Lamanna, A.C.1
Karbstein, K.2
-
91
-
-
0037125926
-
Probing the tetrahymena group i ribozyme reaction in both directions
-
Karbstein K, Carroll KS, Herschlag D (2002) Probing the Tetrahymena group I ribozyme reaction in both directions. Biochemistry 41(37)-11171-11183.
-
(2002)
Biochemistry
, vol.41
, Issue.37
, pp. 11171-11183
-
-
Karbstein, K.1
Carroll, K.S.2
Herschlag, D.3
-
93
-
-
81155159831
-
Ribosome assembly factors prevent premature translation initiation by 40s assembly intermediates
-
Strunk BS, et al. (2011) Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates. Science 333(6048)-1449-1453.
-
(2011)
Science
, vol.333
, Issue.6048
, pp. 1449-1453
-
-
Strunk, B.S.1
|