메뉴 건너뛰기




Volumn 18, Issue 12, 2012, Pages 2118-2127

A structure-based model of RIG-I activation

Author keywords

Crystal and cocrystal X ray structures; dsRNA pamps; RIG I activation

Indexed keywords

DOUBLE STRANDED RNA; PATTERN RECOGNITION RECEPTOR; RETINOIC ACID INDUCIBLE PROTEIN I; VIRUS RNA;

EID: 84869845792     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.035949.112     Document Type: Review
Times cited : (122)

References (58)
  • 1
    • 65649083024 scopus 로고    scopus 로고
    • Regulation of signal transduction by enzymatically inactive antiviral RNA helicase proteins MDA5, RIG-I, and LGP2
    • Bamming D, Horvath CM. 2009. Regulation of signal transduction by enzymatically inactive antiviral RNA helicase proteins MDA5, RIG-I, and LGP2. J Biol Chem 284: 9700-9712.
    • (2009) J Biol Chem , vol.284 , pp. 9700-9712
    • Bamming, D.1    Horvath, C.M.2
  • 2
    • 77957997708 scopus 로고    scopus 로고
    • Preference of RIG-I for short viral RNA molecules in infected cells revealed by next-generation sequencing
    • Baum A, Sachidanandam R, Garcia-Sastre A. 2010. Preference of RIG-I for short viral RNA molecules in infected cells revealed by next-generation sequencing. Proc Natl Acad Sci 107: 16303-16308.
    • (2010) Proc Natl Acad Sci , vol.107 , pp. 16303-16308
    • Baum, A.1    Sachidanandam, R.2    Garcia-Sastre, A.3
  • 4
    • 56749133272 scopus 로고    scopus 로고
    • Viral evasion and subversion of pattern-recognition receptor signalling
    • Bowie AG, Unterholzner L. 2008. Viral evasion and subversion of pattern-recognition receptor signalling. Nat Rev Immunol 8: 911-922.
    • (2008) Nat Rev Immunol , vol.8 , pp. 911-922
    • Bowie, A.G.1    Unterholzner, L.2
  • 5
    • 84861330800 scopus 로고    scopus 로고
    • MAVS ubiquitination by the E3 ligase TRIM25 and degradation by the proteasome is involved in type I interferon production after activation of the antiviral RIG-I-like receptors
    • doi: 10.1186/1741-7007-10-44
    • Castanier C, Zemirli N, Portier A, Garcin D, Bidere N, Vazquez A, Arnoult D. 2012. MAVS ubiquitination by the E3 ligase TRIM25 and degradation by the proteasome is involved in type I interferon production after activation of the antiviral RIG-I-like receptors. BMC Biol 10: 44. doi: 10.1186/1741-7007-10-44.
    • (2012) BMC Biol , vol.10 , pp. 44
    • Castanier, C.1    Zemirli, N.2    Portier, A.3    Garcin, D.4    Bidere, N.5    Vazquez, A.6    Arnoult, D.7
  • 9
    • 80955136787 scopus 로고    scopus 로고
    • A thermal stability assay can help to estimate the crystallization likelihood of biological samples
    • Dupeux F, Rower M, Seroul G, Blot D, Marquez JA. 2011. A thermal stability assay can help to estimate the crystallization likelihood of biological samples. Acta Crystallogr D Biol Crystallogr 67: 915-919.
    • (2011) Acta Crystallogr D Biol Crystallogr , vol.67 , pp. 915-919
    • Dupeux, F.1    Rower, M.2    Seroul, G.3    Blot, D.4    Marquez, J.A.5
  • 10
    • 18844457346 scopus 로고    scopus 로고
    • X-Ray structures of the sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA
    • DOI 10.1016/j.cell.2005.03.026, PII S0092867405002989
    • Dürr H, Körner C, Müller M, Hickmann V, Hopfner KP. 2005. X-ray structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA. Cell 121: 363-373. (Pubitemid 40692297)
    • (2005) Cell , vol.121 , Issue.3 , pp. 363-373
    • Durr, H.1    Korner, C.2    Muller, M.3    Hickmann, V.4    Hopfner, K.-P.5
  • 13
    • 0025222065 scopus 로고
    • A novel mechanism for the initiation of Tacaribe arenavirus genome replication
    • Garcin D, Kolakofsky D. 1990. A novel mechanism for the initiation of Tacaribe arenavirus genome replication. J Virol 64: 6196-6203.
    • (1990) J Virol , vol.64 , pp. 6196-6203
    • Garcin, D.1    Kolakofsky, D.2
  • 14
    • 0026513650 scopus 로고
    • Tacaribe arenavirus RNA synthesis in vitro is primer dependent and suggests an unusual model for the initiation of genome replication
    • Garcin D, Kolakofsky D. 1992. Tacaribe arenavirus RNA synthesis in vitro is primer dependent and suggests an unusual model for the initiation of genome replication. J Virol 66: 1370-1376.
    • (1992) J Virol , vol.66 , pp. 1370-1376
    • Garcin, D.1    Kolakofsky, D.2
  • 17
    • 79961133270 scopus 로고    scopus 로고
    • MAVS forms functional prion-like aggregates to activate and propagate antiviral innate immune response
    • Hou F, Sun L, Zheng H, Skaug B, Jiang QX, Chen ZJ. 2011. MAVS forms functional prion-like aggregates to activate and propagate antiviral innate immune response. Cell 146: 448-461.
    • (2011) Cell , vol.146 , pp. 448-461
    • Hou, F.1    Sun, L.2    Zheng, H.3    Skaug, B.4    Jiang, Q.X.5    Chen, Z.J.6
  • 18
    • 84555178934 scopus 로고    scopus 로고
    • Structural insights into the activation of RIG-I, a nanosensor for viral RNAs
    • Jiang QX, Chen ZJ. 2012. Structural insights into the activation of RIG-I, a nanosensor for viral RNAs. EMBO Rep 13: 7-8.
    • (2012) EMBO Rep , vol.13 , pp. 7-8
    • Jiang, Q.X.1    Chen, Z.J.2
  • 20
    • 84862994793 scopus 로고    scopus 로고
    • Ubiquitin-induced oligomerization of the RNA sensors RIG-I and MDA5 activates antiviral innate immune response
    • Jiang X, Kinch LN, Brautigam CA, Chen X, Du F, Grishin NV, Chen ZJ. 2012. Ubiquitin-induced oligomerization of the RNA sensors RIG-I and MDA5 activates antiviral innate immune response. Immunity 36: 959-973.
    • (2012) Immunity , vol.36 , pp. 959-973
    • Jiang, X.1    Kinch, L.N.2    Brautigam, C.A.3    Chen, X.4    Du, F.5    Grishin, N.V.6    Chen, Z.J.7
  • 21
    • 80755140529 scopus 로고    scopus 로고
    • 55 Amino acid linker between helicase and carboxyl terminal domains of RIG-I functions as a critical repression domain and determines inter-domain conformation
    • Kageyama M, Takahasi K, Narita R, Hirai R, Yoneyama M, Kato H, Fujita T. 2011. 55 amino acid linker between helicase and carboxyl terminal domains of RIG-I functions as a critical repression domain and determines inter-domain conformation. Biochem Biophys Res Commun 415: 75-81.
    • (2011) Biochem Biophys Res Commun , vol.415 , pp. 75-81
    • Kageyama, M.1    Takahasi, K.2    Narita, R.3    Hirai, R.4    Yoneyama, M.5    Kato, H.6    Fujita, T.7
  • 27
    • 84861181618 scopus 로고    scopus 로고
    • The mitochondrial targeting chaperone 14-3-3e regulates a RIG-I translocon that mediates membrane association and innate antiviral immunity
    • Liu HM, Loo YM, Horner SM, Zornetzer GA, Katze MG, Gale M Jr. 2012. The mitochondrial targeting chaperone 14-3-3e regulates a RIG-I translocon that mediates membrane association and innate antiviral immunity. Cell Host Microbe 11: 528-537.
    • (2012) Cell Host Microbe , vol.11 , pp. 528-537
    • Liu, H.M.1    Loo, Y.M.2    Horner, S.M.3    Zornetzer, G.A.4    Katze, M.G.5    Gale Jr., M.6
  • 28
    • 79956314622 scopus 로고    scopus 로고
    • Immune signaling by RIG-I-like receptors
    • Loo YM, Gale M Jr. 2011. Immune signaling by RIG-I-like receptors. Immunity 34: 680-692.
    • (2011) Immunity , vol.34 , pp. 680-692
    • Loo, Y.M.1    Gale Jr., M.2
  • 31
    • 84868553355 scopus 로고    scopus 로고
    • Visualizing the determinants of viral RNA recognition by innate immune sensor RIG-I
    • Luo D, Kohlway A, Vela A, Pyle AM. 2012. Visualizing the determinants of viral RNA recognition by innate immune sensor RIG-I. Structure 20: 1-6.
    • (2012) Structure , vol.20 , pp. 1-6
    • Luo, D.1    Kohlway, A.2    Vela, A.3    Pyle, A.M.4
  • 32
    • 77953308262 scopus 로고    scopus 로고
    • Unpaired 59 ppp-nucleotides, as found in arenavirus double-stranded RNA panhandles, are not recognized by RIG-I
    • Marq JB, Kolakofsky D, Garcin D. 2010. Unpaired 59 ppp-nucleotides, as found in arenavirus double-stranded RNA panhandles, are not recognized by RIG-I. J Biol Chem 285: 18208-18216.
    • (2010) J Biol Chem , vol.285 , pp. 18208-18216
    • Marq, J.B.1    Kolakofsky, D.2    Garcin, D.3
  • 33
    • 79953166075 scopus 로고    scopus 로고
    • Short double-stranded RNAs with an overhanging 59 ppp-nucleotide, as found in arenavirus genomes, act as RIG-I decoys
    • Marq JB, Hausmann S, Veillard N, Kolakofsky D, Garcin D. 2011. Short double-stranded RNAs with an overhanging 59 ppp-nucleotide, as found in arenavirus genomes, act as RIG-I decoys. J Biol Chem 286: 6108-6116.
    • (2011) J Biol Chem , vol.286 , pp. 6108-6116
    • Marq, J.B.1    Hausmann, S.2    Veillard, N.3    Kolakofsky, D.4    Garcin, D.5
  • 34
    • 79955570153 scopus 로고    scopus 로고
    • Genomic RNAs of Borna disease virus are elongated on internal template motifs after realignment of the 39 termini
    • Martin A, Hoefs N, Tadewaldt J, Staeheli P, Schneider U. 2011. Genomic RNAs of Borna disease virus are elongated on internal template motifs after realignment of the 39 termini. Proc Natl Acad Sci 108: 7206-7211.
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 7206-7211
    • Martin, A.1    Hoefs, N.2    Tadewaldt, J.3    Staeheli, P.4    Schneider, U.5
  • 35
    • 27144440476 scopus 로고    scopus 로고
    • Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus
    • DOI 10.1038/nature04193, PII N04193
    • Meylan E, Curran J, Hofmann K, Moradpour D, Binder M, Bartenschlager R, Tschopp J. 2005. Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus. Nature 437: 1167-1172. (Pubitemid 41509355)
    • (2005) Nature , vol.437 , Issue.7062 , pp. 1167-1172
    • Meylan, E.1    Curran, J.2    Hofmann, K.3    Moradpour, D.4    Binder, M.5    Bartenschlager, R.6    Tschopp, J.7
  • 36
    • 79954598438 scopus 로고    scopus 로고
    • A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export
    • Montpetit B, Thomsen ND, Helmke KJ, Seeliger MA, Berger JM, Weis K. 2011. A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export. Nature 472: 238-242.
    • (2011) Nature , vol.472 , pp. 238-242
    • Montpetit, B.1    Thomsen, N.D.2    Helmke, K.J.3    Seeliger, M.A.4    Berger, J.M.5    Weis, K.6
  • 38
  • 39
    • 11844252069 scopus 로고    scopus 로고
    • Crystal structure and functional implications of Pyrococcus furiosus Hef helicase domain involved in branched DNA processing
    • DOI 10.1016/j.str.2004.11.008, PII S0969212604003934
    • Nishino T, Komori K, Tsuchiya D, Ishino Y, Morikawa K. 2005. Crystal structure and functional implications of Pyrococcus furiosus hef helicase domain involved in branched DNA processing. Structure 13: 143-153. (Pubitemid 40092482)
    • (2005) Structure , vol.13 , Issue.1 , pp. 143-153
    • Nishino, T.1    Komori, K.2    Tsuchiya, D.3    Ishino, Y.4    Morikawa, K.5
  • 41
    • 84862909216 scopus 로고    scopus 로고
    • Cooperative assembly and dynamic disassembly of MDA5 filaments for viral dsRNA recognition
    • Peisley A, Lin C, Wu B, Orme-Johnson M, Liu M, Walz T, Hur S. 2011. Cooperative assembly and dynamic disassembly of MDA5 filaments for viral dsRNA recognition. Proc Natl Acad Sci 108: 21010-21015.
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 21010-21015
    • Peisley, A.1    Lin, C.2    Wu, B.3    Orme-Johnson, M.4    Liu, M.5    Walz, T.6    Hur, S.7
  • 46
    • 68049089651 scopus 로고    scopus 로고
    • Recognition of 59 triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus
    • Schlee M, Roth A, Hornung V, Hagmann CA, Wimmenauer V, Barchet W, Coch C, Janke M, Mihailovic A, Wardle G, et al. 2009. Recognition of 59 triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus. Immunity 31: 25-34.
    • (2009) Immunity , vol.31 , pp. 25-34
    • Schlee, M.1    Roth, A.2    Hornung, V.3    Hagmann, C.A.4    Wimmenauer, V.5    Barchet, W.6    Coch, C.7    Janke, M.8    Mihailovic, A.9    Wardle, G.10
  • 48
    • 33646017369 scopus 로고    scopus 로고
    • Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa
    • Sengoku T, Nureki O, Nakamura A, Kobayashi S, Yokoyama S. 2006. Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa. Cell 125: 287-300.
    • (2006) Cell , vol.125 , pp. 287-300
    • Sengoku, T.1    Nureki, O.2    Nakamura, A.3    Kobayashi, S.4    Yokoyama, S.5
  • 49
    • 24144461689 scopus 로고    scopus 로고
    • Identification and characterization of MAVS, a mitochondrial antiviral signaling protein that activates NF-κB and IRF3
    • DOI 10.1016/j.cell.2005.08.012, PII S0092867405008160
    • Seth RB, Sun L, Ea CK, Chen ZJ. 2005. Identification and characterization of MAVS, a mitochondrial antiviral signaling protein that activates NF-kB and IRF 3. Cell 122: 669-682. (Pubitemid 41242633)
    • (2005) Cell , vol.122 , Issue.5 , pp. 669-682
    • Seth, R.B.1    Sun, L.2    Ea, C.-K.3    Chen, Z.J.4
  • 50
    • 36048996083 scopus 로고    scopus 로고
    • Activation of the beta interferon promoter by unnatural Sendai virus infection requires RIG-I and is inhibited by viral C proteins
    • DOI 10.1128/JVI.01300-07
    • Strahle L, Marq JB, Brini A, Hausmann S, Kolakofsky D, Garcin D. 2007. Activation of the b interferon promoter by unnatural Sendai virus infection requires RIG-I and is inhibited by viral C proteins. J Virol 81: 12227-12237. (Pubitemid 350085838)
    • (2007) Journal of Virology , vol.81 , Issue.22 , pp. 12227-12237
    • Strahle, L.1    Marq, J.-B.2    Brini, A.3    Hausmann, S.4    Kolakofsky, D.5    Garcin, D.6
  • 51
    • 84869765600 scopus 로고    scopus 로고
    • The thermodynamic basis for viral RNA detection by the RIG-I innate immune sensor
    • doi: 10.1074/jbc.M112.385146
    • Vela A, Fedorova O, Ding SC, Pyle AM. 2012. The thermodynamic basis for viral RNA detection by the RIG-I innate immune sensor. J Biol Chem doi: 10.1074/jbc.M112.385146.
    • (2012) J Biol Chem
    • Vela, A.1    Fedorova, O.2    Ding, S.C.3    Pyle, A.M.4
  • 53
    • 24944538819 scopus 로고    scopus 로고
    • VISA is an adapter protein required for virus-triggered IFN-β signaling
    • DOI 10.1016/j.molcel.2005.08.014, PII S109727650501556X
    • Xu LG, Wang YY, Han KJ, Li LY, Zhai Z, Shu HB. 2005. VISA is an adapter protein required for virus-triggered IFN-b signaling. Mol Cell 19: 727-740. (Pubitemid 41316668)
    • (2005) Molecular Cell , vol.19 , Issue.6 , pp. 727-740
    • Xu, L.-G.1    Wang, Y.-Y.2    Han, K.-J.3    Li, L.-Y.4    Zhai, Z.5    Shu, H.-B.6
  • 56
    • 77951708374 scopus 로고    scopus 로고
    • Reconstitution of the RIG-I pathway reveals a signaling role of unanchored polyubiquitin chains in innate immunity
    • Zeng W, Sun L, Jiang X, Chen X, Hou F, Adhikari A, Xu M, Chen ZJ. 2010. Reconstitution of the RIG-I pathway reveals a signaling role of unanchored polyubiquitin chains in innate immunity. Cell 141: 315-330.
    • (2010) Cell , vol.141 , pp. 315-330
    • Zeng, W.1    Sun, L.2    Jiang, X.3    Chen, X.4    Hou, F.5    Adhikari, A.6    Xu, M.7    Chen, Z.J.8
  • 57
    • 0033816530 scopus 로고    scopus 로고
    • An RNA helicase, RHIV -1, induced by porcine reproductive and respiratory syndrome virus (PRRSV) is mapped on porcine chromosome 10q13
    • Zhang X, Wang C, Schook LB, Hawken RJ, Rutherford MS. 2000. An RNA helicase, RHIV -1, induced by porcine reproductive and respiratory syndrome virus (PRRSV) is mapped on porcine chromosome 10q13. Microb Pathog 28: 267-278.
    • (2000) Microb Pathog , vol.28 , pp. 267-278
    • Zhang, X.1    Wang, C.2    Schook, L.B.3    Hawken, R.J.4    Rutherford, M.S.5
  • 58
    • 66249094862 scopus 로고    scopus 로고
    • Origin and evolution of the RIG-I like RNA helicase gene family
    • doi: 10.1186/1471-2148-9-85
    • Zou J, Chang M, Nie P, Secombes CJ. 2009. Origin and evolution of the RIG-I like RNA helicase gene family. BMC Evol Biol 9: 85. doi: 10.1186/1471-2148-9-85.
    • (2009) BMC Evol Biol , vol.9 , pp. 85
    • Zou, J.1    Chang, M.2    Nie, P.3    Secombes, C.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.