메뉴 건너뛰기




Volumn 3, Issue 6, 2013, Pages 2179-2190

Cellular Source and Mechanisms of High Transcriptome Complexity in the Mammalian Testis

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE H3; TRANSCRIPTOME;

EID: 84879795456     PISSN: None     EISSN: 22111247     Source Type: Journal    
DOI: 10.1016/j.celrep.2013.05.031     Document Type: Article
Times cited : (430)

References (42)
  • 1
    • 67649790837 scopus 로고    scopus 로고
    • Understanding what determines the frequency and pattern of human germline mutations
    • Arnheim N., Calabrese P. Understanding what determines the frequency and pattern of human germline mutations. Nat. Rev. Genet. 2009, 10:478-488.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 478-488
    • Arnheim, N.1    Calabrese, P.2
  • 5
    • 69849115535 scopus 로고    scopus 로고
    • Distinct histone modifications define initiation and repair of meiotic recombination in the mouse
    • Buard J., Barthès P., Grey C., de Massy B. Distinct histone modifications define initiation and repair of meiotic recombination in the mouse. EMBO J. 2009, 28:2616-2624.
    • (2009) EMBO J. , vol.28 , pp. 2616-2624
    • Buard, J.1    Barthès, P.2    Grey, C.3    de Massy, B.4
  • 6
    • 80052978224 scopus 로고    scopus 로고
    • Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
    • Cabili M.N., Trapnell C., Goff L., Koziol M., Tazon-Vega B., Regev A., Rinn J.L. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses. Genes Dev. 2011, 25:1915-1927.
    • (2011) Genes Dev. , vol.25 , pp. 1915-1927
    • Cabili, M.N.1    Trapnell, C.2    Goff, L.3    Koziol, M.4    Tazon-Vega, B.5    Regev, A.6    Rinn, J.L.7
  • 8
    • 79956330964 scopus 로고    scopus 로고
    • CpG islands and the regulation of transcription
    • Deaton A.M., Bird A. CpG islands and the regulation of transcription. Genes Dev. 2011, 25:1010-1022.
    • (2011) Genes Dev. , vol.25 , pp. 1010-1022
    • Deaton, A.M.1    Bird, A.2
  • 10
    • 0016753415 scopus 로고
    • Centrifugal elutriation: separation of spermatogenic cells on the basis of sedimentation velocity
    • Grabske R.J., Lake S., Gledhill B.L., Meistrich M.L. Centrifugal elutriation: separation of spermatogenic cells on the basis of sedimentation velocity. J.Cell. Physiol. 1975, 86:177-189.
    • (1975) J.Cell. Physiol. , vol.86 , pp. 177-189
    • Grabske, R.J.1    Lake, S.2    Gledhill, B.L.3    Meistrich, M.L.4
  • 13
    • 78649231644 scopus 로고    scopus 로고
    • Origins, evolution, and phenotypic impact of new genes
    • Kaessmann H. Origins, evolution, and phenotypic impact of new genes. Genome Res. 2010, 20:1313-1326.
    • (2010) Genome Res. , vol.20 , pp. 1313-1326
    • Kaessmann, H.1
  • 14
    • 57749177443 scopus 로고    scopus 로고
    • RNA-based gene duplication: mechanistic and evolutionary insights
    • Kaessmann H., Vinckenbosch N., Long M. RNA-based gene duplication: mechanistic and evolutionary insights. Nat. Rev. Genet. 2009, 10:19-31.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 19-31
    • Kaessmann, H.1    Vinckenbosch, N.2    Long, M.3
  • 16
    • 15844380966 scopus 로고    scopus 로고
    • Chromatin remodelling and epigenetic features of germ cells
    • Kimmins S., Sassone-Corsi P. Chromatin remodelling and epigenetic features of germ cells. Nature 2005, 434:583-589.
    • (2005) Nature , vol.434 , pp. 583-589
    • Kimmins, S.1    Sassone-Corsi, P.2
  • 17
    • 0034889978 scopus 로고    scopus 로고
    • A possible meiotic function of the peculiar patterns of gene expression in mammalian spermatogenic cells
    • Kleene K.C. A possible meiotic function of the peculiar patterns of gene expression in mammalian spermatogenic cells. Mech. Dev. 2001, 106:3-23.
    • (2001) Mech. Dev. , vol.106 , pp. 3-23
    • Kleene, K.C.1
  • 19
    • 61349177268 scopus 로고    scopus 로고
    • Mfuzz: a software package for soft clustering of microarray data
    • Kumar L., Futschik M.E. Mfuzz: a software package for soft clustering of microarray data. Bioinformation 2007, 2:5-7.
    • (2007) Bioinformation , vol.2 , pp. 5-7
    • Kumar, L.1    Futschik, M.E.2
  • 20
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B., Trapnell C., Pop M., Salzberg S.L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009, 10:R25.
    • (2009) Genome Biol. , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 22
    • 78651481549 scopus 로고    scopus 로고
    • Transcribed dark matter: meaning or myth?
    • Ponting C.P., Belgard T.G. Transcribed dark matter: meaning or myth?. Hum. Mol. Genet. 2010, 19(R2):R162-R168.
    • (2010) Hum. Mol. Genet. , vol.19 , Issue.2 R
    • Ponting, C.P.1    Belgard, T.G.2
  • 24
    • 74549125753 scopus 로고    scopus 로고
    • An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data
    • Ramsköld D., Wang E.T., Burge C.B., Sandberg R. An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data. PLoS Comput. Biol. 2009, 5:e1000598.
    • (2009) PLoS Comput. Biol. , vol.5
    • Ramsköld, D.1    Wang, E.T.2    Burge, C.B.3    Sandberg, R.4
  • 26
    • 0028809261 scopus 로고
    • Cell size regulation, a mechanism that controls cellular RNA accumulation: consequences on regulation of the ubiquitous transcription factors Oct1 and NF-Y and the liver-enriched transcription factor DBP
    • Schmidt E.E., Schibler U. Cell size regulation, a mechanism that controls cellular RNA accumulation: consequences on regulation of the ubiquitous transcription factors Oct1 and NF-Y and the liver-enriched transcription factor DBP. J.Cell Biol. 1995, 128:467-483.
    • (1995) J.Cell Biol. , vol.128 , pp. 467-483
    • Schmidt, E.E.1    Schibler, U.2
  • 27
    • 0142091380 scopus 로고    scopus 로고
    • A multitude of genes expressed solely in meiotic or postmeiotic spermatogenic cells offers a myriad of contraceptive targets
    • Schultz N., Hamra F.K., Garbers D.L. A multitude of genes expressed solely in meiotic or postmeiotic spermatogenic cells offers a myriad of contraceptive targets. Proc. Natl. Acad. Sci. USA 2003, 100:12201-12206.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 12201-12206
    • Schultz, N.1    Hamra, F.K.2    Garbers, D.L.3
  • 31
    • 3142769033 scopus 로고    scopus 로고
    • The murine testicular transcriptome: characterizing gene expression in the testis during the progression of spermatogenesis
    • Shima J.E., McLean D.J., McCarrey J.R., Griswold M.D. The murine testicular transcriptome: characterizing gene expression in the testis during the progression of spermatogenesis. Biol. Reprod. 2004, 71:319-330.
    • (2004) Biol. Reprod. , vol.71 , pp. 319-330
    • Shima, J.E.1    McLean, D.J.2    McCarrey, J.R.3    Griswold, M.D.4
  • 32
    • 33947303168 scopus 로고    scopus 로고
    • Transposable elements and the epigenetic regulation of the genome
    • Slotkin R.K., Martienssen R. Transposable elements and the epigenetic regulation of the genome. Nat. Rev. Genet. 2007, 8:272-285.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 272-285
    • Slotkin, R.K.1    Martienssen, R.2
  • 33
    • 67649854923 scopus 로고    scopus 로고
    • High-throughput bisulfite sequencing in mammalian genomes
    • Smith Z.D., Gu H., Bock C., Gnirke A., Meissner A. High-throughput bisulfite sequencing in mammalian genomes. Methods 2009, 48:226-232.
    • (2009) Methods , vol.48 , pp. 226-232
    • Smith, Z.D.1    Gu, H.2    Bock, C.3    Gnirke, A.4    Meissner, A.5
  • 34
    • 70350244282 scopus 로고    scopus 로고
    • Superovulation in mice alters the methylation pattern of imprinted genes in the sperm of the offspring
    • Stouder C., Deutsch S., Paoloni-Giacobino A. Superovulation in mice alters the methylation pattern of imprinted genes in the sperm of the offspring. Reprod. Toxicol. 2009, 28:536-541.
    • (2009) Reprod. Toxicol. , vol.28 , pp. 536-541
    • Stouder, C.1    Deutsch, S.2    Paoloni-Giacobino, A.3
  • 36
    • 34250626425 scopus 로고    scopus 로고
    • Meiotic sex chromosome inactivation
    • Turner J.M. Meiotic sex chromosome inactivation. Development 2007, 134:1823-1831.
    • (2007) Development , vol.134 , pp. 1823-1831
    • Turner, J.M.1
  • 38
    • 0035071815 scopus 로고    scopus 로고
    • An abundance of X-linked genes expressed in spermatogonia
    • Wang P.J., McCarrey J.R., Yang F., Page D.C. An abundance of X-linked genes expressed in spermatogonia. Nat. Genet. 2001, 27:422-426.
    • (2001) Nat. Genet. , vol.27 , pp. 422-426
    • Wang, P.J.1    McCarrey, J.R.2    Yang, F.3    Page, D.C.4
  • 39
    • 57749195712 scopus 로고    scopus 로고
    • RNA-Seq: a revolutionary tool for transcriptomics
    • Wang Z., Gerstein M., Snyder M. RNA-Seq: a revolutionary tool for transcriptomics. Nat. Rev. Genet. 2009, 10:57-63.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 40
    • 68949141599 scopus 로고    scopus 로고
    • BSMAP: whole genome bisulfite sequence MAPping program
    • Xi Y., Li W. BSMAP: whole genome bisulfite sequence MAPping program. BMC Bioinformatics 2009, 10:232.
    • (2009) BMC Bioinformatics , vol.10 , pp. 232
    • Xi, Y.1    Li, W.2
  • 42
    • 78149404797 scopus 로고    scopus 로고
    • Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome
    • Zhang Y.E., Vibranovski M.D., Landback P., Marais G.A., Long M. Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome. PLoS Biol. 2010, 8:8.
    • (2010) PLoS Biol. , vol.8 , pp. 8
    • Zhang, Y.E.1    Vibranovski, M.D.2    Landback, P.3    Marais, G.A.4    Long, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.