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Volumn 430, Issue 7002, 2004, Pages 857-864

The structure and evolution of centromeric transition regions within the human genome

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOMES; DNA;

EID: 4344672526     PISSN: 00280836     EISSN: None     Source Type: Journal    
DOI: 10.1038/nature02806     Document Type: Article
Times cited : (164)

References (40)
  • 1
    • 0842289255 scopus 로고    scopus 로고
    • Sequencing of a rice centromere uncovers active genes
    • Nagaki, K. et al. Sequencing of a rice centromere uncovers active genes. Nature Genet. 36, 138-145 (2004).
    • (2004) Nature Genet. , vol.36 , pp. 138-145
    • Nagaki, K.1
  • 2
    • 0034018260 scopus 로고    scopus 로고
    • Molecular structure and evolution of an alpha/non-alpha satellite junction at 16p11
    • Horvath, J. et al. Molecular structure and evolution of an alpha/non-alpha satellite junction at 16p11. Hum. Mol. Genet. 9, 113-123 (2000).
    • (2000) Hum. Mol. Genet. , vol.9 , pp. 113-123
    • Horvath, J.1
  • 3
    • 0344153498 scopus 로고    scopus 로고
    • Duplicate, decouple, disperse: The evolutionary transience of human centromeric regions
    • Jackson, M. Duplicate, decouple, disperse: the evolutionary transience of human centromeric regions. Curr. Opin. Genet. Dev. 13, 629-635 (2003).
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 629-635
    • Jackson, M.1
  • 4
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • International Human Genome Sequencing Consortium, Initial sequencing and analysis of the human genome. Nature 409, 860-921 (2001).
    • (2001) Nature , vol.409 , pp. 860-921
  • 5
    • 0031692007 scopus 로고    scopus 로고
    • Masquerading repeats: Paralogous pitfalls of the Human Genome
    • Eichler, E. E. Masquerading repeats: Paralogous pitfalls of the Human Genome. Genome Res. 8, 758-762 (1998).
    • (1998) Genome Res. , vol.8 , pp. 758-762
    • Eichler, E.E.1
  • 6
    • 0034831138 scopus 로고    scopus 로고
    • Segmental duplications: Organization and impact within the current human genome project assembly
    • Bailey, J. A., Yavor, A. M., Massa, H. F., Trask, B. J. & Eichler, E. E. Segmental duplications: organization and impact within the current human genome project assembly. Genome Res. 11, 1005-1017 (2001).
    • (2001) Genome Res. , vol.11 , pp. 1005-1017
    • Bailey, J.A.1    Yavor, A.M.2    Massa, H.F.3    Trask, B.J.4    Eichler, E.E.5
  • 7
    • 10744231402 scopus 로고    scopus 로고
    • Whole-genome shotgun assembly and comparison of human genome assmblies
    • Istrail, S. et al. Whole-genome shotgun assembly and comparison of human genome assmblies. Proc. Natl Acad. Sci. USA 101, 1916-1921 (2004).
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 1916-1921
    • Istrail, S.1
  • 8
    • 0036138187 scopus 로고    scopus 로고
    • Human-specific duplication and mosaic transcripts: The recent paralogous structure of chromosome 22
    • Bailey, J. A. et al. Human-specific duplication and mosaic transcripts: the recent paralogous structure of chromosome 22. Am. J. Hum. Genet. 70, 83-100 (2002).
    • (2002) Am. J. Hum. Genet. , vol.70 , pp. 83-100
    • Bailey, J.A.1
  • 9
    • 0142059650 scopus 로고    scopus 로고
    • An Alu transposition model for the origin and expansion of human segmental duplications
    • Bailey, J. A., Giu, L. & Eichler, E. E. An Alu transposition model for the origin and expansion of human segmental duplications. Am. J. Hum. Genet. 73, 823-834 (2003).
    • (2003) Am. J. Hum. Genet. , vol.73 , pp. 823-834
    • Bailey, J.A.1    Giu, L.2    Eichler, E.E.3
  • 10
    • 0035475786 scopus 로고    scopus 로고
    • Lessons from the human genome: Transitions between euchromatin and heterochromatin
    • Horvath, J. E., Bailey, J. A., Locke, D. P. & Eichler, E. E. Lessons from the human genome: transitions between euchromatin and heterochromatin. Hum. Mol. Genet. 10, 2215-2223 (2001).
    • (2001) Hum. Mol. Genet. , vol.10 , pp. 2215-2223
    • Horvath, J.E.1    Bailey, J.A.2    Locke, D.P.3    Eichler, E.E.4
  • 11
    • 0035812788 scopus 로고    scopus 로고
    • Genomic and genetic definition of a functional human centromere
    • Schueler, M. G., Higgins, A. W., Rudd, M. K., Gustashaw, K. & Willard, H. F. Genomic and genetic definition of a functional human centromere. Science 294, 109-115 (2001).
    • (2001) Science , vol.294 , pp. 109-115
    • Schueler, M.G.1    Higgins, A.W.2    Rudd, M.K.3    Gustashaw, K.4    Willard, H.F.5
  • 12
    • 10744222471 scopus 로고    scopus 로고
    • Using a pericentromeric interspersed repeat to recapitulate the phylogeny and expansion of human centromeric segmental duplications
    • Horvath, J. E. et al. Using a pericentromeric interspersed repeat to recapitulate the phylogeny and expansion of human centromeric segmental duplications. Mol. Biol. Evol. 20, 1463-1479 (2003).
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 1463-1479
    • Horvath, J.E.1
  • 13
    • 0042651065 scopus 로고    scopus 로고
    • Neocentromeres in 15q24- 26 map to duplicons which flanked an ancestral centromere in 15q25
    • Ventura, M. et al. Neocentromeres in 15q24-26 map to duplicons which flanked an ancestral centromere in 15q25. Genome Res. 13, 2059-2068 (2003).
    • (2003) Genome Res. , vol.13 , pp. 2059-2068
    • Ventura, M.1
  • 14
    • 0020027910 scopus 로고
    • The origin of man: A chromosomal pictorial legacy
    • Yunis, J. J. & Prakash, O. The origin of man: a chromosomal pictorial legacy. Science 215, 1525-1530 (1982).
    • (1982) Science , vol.215 , pp. 1525-1530
    • Yunis, J.J.1    Prakash, O.2
  • 15
    • 0027406565 scopus 로고
    • An alphoid DNA sequence conserved in all human and great ape chromosomes: Evidence for ancient centromeric sequences at human chromosomal regions 2q21 and 9q13
    • Baldini, A. et al. An alphoid DNA sequence conserved in all human and great ape chromosomes: evidence for ancient centromeric sequences at human chromosomal regions 2q21 and 9q13. Hum. Genet. 90, 577-583 (1993).
    • (1993) Hum. Genet. , vol.90 , pp. 577-583
    • Baldini, A.1
  • 16
    • 0037350508 scopus 로고    scopus 로고
    • Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome
    • Liu, G. et al. Analysis of primate genomic variation reveals a repeat-driven expansion of the human genome. Genome Res. 13, 358-368 (2003).
    • (2003) Genome Res. , vol.13 , pp. 358-368
    • Liu, G.1
  • 18
    • 0041334086 scopus 로고    scopus 로고
    • Chromosome 6 phylogeny in primates and centromere repositioning
    • Eder, V. et al. Chromosome 6 phylogeny in primates and centromere repositioning. Mol. Biol. Evol. 20, 1506-1512 (2003).
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 1506-1512
    • Eder, V.1
  • 19
    • 0035500899 scopus 로고    scopus 로고
    • Recent duplication, domain accretion and the dynamic mutation of the human genome
    • Eichler, E. E. Recent duplication, domain accretion and the dynamic mutation of the human genome. Trends Genet. 17, 661-669 (2001).
    • (2001) Trends Genet. , vol.17 , pp. 661-669
    • Eichler, E.E.1
  • 20
    • 9244244285 scopus 로고    scopus 로고
    • Molecular evolution of the human chromosome 15 pericentromeric region
    • in the press
    • Locke, D. P. et al. Molecular evolution of the human chromosome 15 pericentromeric region. Cytogenet. Genome Res. (in the press).
    • Cytogenet. Genome Res.
    • Locke, D.P.1
  • 21
    • 0141430082 scopus 로고    scopus 로고
    • The 200-kb segmental duplication on human chromosome 21 originates from a pericentromeric dissemination involving human chromosomes 2,18 and 13
    • Golfier, G. et al. The 200-kb segmental duplication on human chromosome 21 originates from a pericentromeric dissemination involving human chromosomes 2,18 and 13. Gene 312, 51-59 (2003).
    • (2003) Gene , vol.312 , pp. 51-59
    • Golfier, G.1
  • 22
    • 0037348842 scopus 로고    scopus 로고
    • Segmental duplications in euchromatic regions of human chromosome 5: A source of evolutionary instability and transcriptional innovation
    • Courseaux, A. et al. Segmental duplications in euchromatic regions of human chromosome 5: a source of evolutionary instability and transcriptional innovation. Genome Res. 13, 369-381 (2003).
    • (2003) Genome Res. , vol.13 , pp. 369-381
    • Courseaux, A.1
  • 23
    • 0033916868 scopus 로고    scopus 로고
    • The mosaic structure of a 2p11 pericentromeric segment: A strategy for characterizing complex regions of the human genome
    • Horvath, J., Schwartz, S. & Eichler, E. The mosaic structure of a 2p11 pericentromeric segment: A strategy for characterizing complex regions of the human genome. Genome Res. 10, 839-852 (2000).
    • (2000) Genome Res. , vol.10 , pp. 839-852
    • Horvath, J.1    Schwartz, S.2    Eichler, E.3
  • 24
    • 0037047628 scopus 로고    scopus 로고
    • Recent segmental duplications in the human genome
    • Bailey, J. A. et al. Recent segmental duplications in the human genome. Science 297, 1003-1007 (2002).
    • (2002) Science , vol.297 , pp. 1003-1007
    • Bailey, J.A.1
  • 25
    • 0037317323 scopus 로고    scopus 로고
    • Genomic sequence and transcriptional profile of the boundary between pericentromeric satellites and genes on human chromosome arm 10p
    • Guy, J. et al. Genomic sequence and transcriptional profile of the boundary between pericentromeric satellites and genes on human chromosome arm 10p. Genome Res. 13, 159-172 (2003).
    • (2003) Genome Res. , vol.13 , pp. 159-172
    • Guy, J.1
  • 26
    • 0038495746 scopus 로고    scopus 로고
    • The DNA sequence of human chromosome 7
    • Hillier, L. W. et al. The DNA sequence of human chromosome 7. Nature 424,157-164 (2003).
    • (2003) Nature , vol.424 , pp. 157-164
    • Hillier, L.W.1
  • 27
    • 18244396646 scopus 로고    scopus 로고
    • Human paralogs of KIAA0187 were created through independent pericentromeric-directed and chromosome-specific duplication mechanisms
    • Crosier, M. et al. Human paralogs of KIAA0187 were created through independent pericentromeric-directed and chromosome-specific duplication mechanisms. Genome Res. 12, 67-80 (2002).
    • (2002) Genome Res. , vol.12 , pp. 67-80
    • Crosier, M.1
  • 28
    • 0032928889 scopus 로고    scopus 로고
    • Sequences flanking the centromere of human chromosome 10 are a complex patchwork of arm-specific sequences, stable duplications, and unstable sequences with homologies to telomeric and other centromeric locations
    • Jackson, M. S. et al. Sequences flanking the centromere of human chromosome 10 are a complex patchwork of arm-specific sequences, stable duplications, and unstable sequences with homologies to telomeric and other centromeric locations. Hum. Mol. Genet. 8, 205-215 (1999).
    • (1999) Hum. Mol. Genet. , vol.8 , pp. 205-215
    • Jackson, M.S.1
  • 29
    • 0037351987 scopus 로고    scopus 로고
    • Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization
    • Locke, D. P. et al. Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization. Genome Res. 13, 347-357 (2003).
    • (2003) Genome Res. , vol.13 , pp. 347-357
    • Locke, D.P.1
  • 30
    • 0037267093 scopus 로고    scopus 로고
    • Pericentromeric duplications in the laboratory mouse
    • Thomas, J. W. et al. Pericentromeric duplications in the laboratory mouse. Genome Res. 13, 55-63 (2003).
    • (2003) Genome Res. , vol.13 , pp. 55-63
    • Thomas, J.W.1
  • 31
    • 1842717953 scopus 로고    scopus 로고
    • Recent segmental duplications in the working draft assembly of the brown Norway rat
    • Tuzun, E., Bailey, J. & Eichler, E. E. Recent segmental duplications in the working draft assembly of the brown Norway rat. Genome Res. 14, 493-506 (2004).
    • (2004) Genome Res. , vol.14 , pp. 493-506
    • Tuzun, E.1    Bailey, J.2    Eichler, E.E.3
  • 33
    • 0033601285 scopus 로고    scopus 로고
    • Genetic definition and sequence analysis of Arabidopsis centromeres
    • Copenhaver, G. P. et al. Genetic definition and sequence analysis of Arabidopsis centromeres. Science: 286, 2468-2474 (1999).
    • (1999) Science , vol.286 , pp. 2468-2474
    • Copenhaver, G.P.1
  • 34
    • 0029994815 scopus 로고    scopus 로고
    • Molecular phylogeny of the New World monkeys (Platyrrhini, primates) based on two unlinked nuclear genes: IRBP intron I and epsilon-globin sequences
    • Schneider, H. et al. Molecular phylogeny of the New World monkeys (Platyrrhini, primates) based on two unlinked nuclear genes: IRBP intron I and epsilon-globin sequences. Am. J. Phys. Anthropol. 100, 153-179 (1996).
    • (1996) Am. J. Phys. Anthropol. , vol.100 , pp. 153-179
    • Schneider, H.1
  • 35
    • 0023066343 scopus 로고
    • Chromosome-specific subsets of human alpha satellite DNA: Analysis of sequence divergence within and between chromosomal subsets and evidence for an ancestral pentameric repeat
    • Willard, H. F. & Waye, J. S. Chromosome-specific subsets of human alpha satellite DNA: analysis of sequence divergence within and between chromosomal subsets and evidence for an ancestral pentameric repeat. J. Mol. Evol. 25, 207-214 (1987).
    • (1987) J. Mol. Evol. , vol.25 , pp. 207-214
    • Willard, H.F.1    Waye, J.S.2
  • 38
    • 0019751983 scopus 로고
    • High resolution-banding
    • An International System for Human Cytogenetic Nomenclature, High resolution-banding. Cytogenet. Cell Genet. 31, 1-23 (1981).
    • (1981) Cytogenet. Cell Genet. , vol.31 , pp. 1-23
  • 39
    • 10744221353 scopus 로고    scopus 로고
    • Closing the gaps on human chromosome 19 revealed genes with a high density of repetitive tandemly arrayed elements
    • Leem, S. H. et al. Closing the gaps on human chromosome 19 revealed genes with a high density of repetitive tandemly arrayed elements. Genome Res. 14, 239-246 (2004).
    • (2004) Genome Res. , vol.14 , pp. 239-246
    • Leem, S.H.1
  • 40
    • 85059049192 scopus 로고    scopus 로고
    • Analysis of the centromeric regions of the human genome assembly
    • in the press
    • Rudd, M. K. & Willard, H. F. Analysis of the centromeric regions of the human genome assembly. Trends Genet. (in the press).
    • Trends Genet.
    • Rudd, M.K.1    Willard, H.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.