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Volumn 15, Issue 4, 2013, Pages 413-424

Biodiversity of Actinomycetes Associated with Caribbean Sponges and Their Potential for Natural Product Discovery

Author keywords

Actinomycete; Micromonospora; Natural products; Sponges

Indexed keywords

ACTINOMYCETE; MARINE ACTINOMYCETE; METABOLITE PRODUCTION; MICROMONOSPORA; NATURAL PRODUCTS; PHYLOGENETIC ANALYSIS; SECONDARY METABOLITES; SPONGES;

EID: 84879782113     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-013-9493-4     Document Type: Article
Times cited : (36)

References (64)
  • 2
    • 43849089834 scopus 로고    scopus 로고
    • Microbial diversity and the genetic nature of microbial species
    • Achtman M, Wagner M (2008) Microbial diversity and the genetic nature of microbial species. Nat Rev Microbiol 6: 431-440.
    • (2008) Nat Rev Microbiol , vol.6 , pp. 431-440
    • Achtman, M.1    Wagner, M.2
  • 4
    • 19644393308 scopus 로고    scopus 로고
    • Bioactive microbial metabolites
    • Bérdy J (2005) Bioactive microbial metabolites. J Antibiot 58: 1-26.
    • (2005) J Antibiot , vol.58 , pp. 1-26
    • Bérdy, J.1
  • 5
    • 4143145178 scopus 로고    scopus 로고
    • In vitro assessment of chlrohexidine glocunate-impregnated polyurethanefoam antimicrobial dressing using zone of inhibition assays
    • Bhende S, Spangler D (2004) In vitro assessment of chlrohexidine glocunate-impregnated polyurethanefoam antimicrobial dressing using zone of inhibition assays. Infect Cont Hosp Epidemiol 25: 664-667.
    • (2004) Infect Cont Hosp Epidemiol , vol.25 , pp. 664-667
    • Bhende, S.1    Spangler, D.2
  • 6
    • 0041919471 scopus 로고    scopus 로고
    • Ribosomal DNA sequencing for identification of aerobic gram-positive rods in the clinical laboratory (an 18-month evaluation)
    • Bosshard PP, Abels S, Zbinden R, Bottger EC, Altwegg M (2003) Ribosomal DNA sequencing for identification of aerobic gram-positive rods in the clinical laboratory (an 18-month evaluation). J Clin Microbiol 41: 4134-4140.
    • (2003) J Clin Microbiol , vol.41 , pp. 4134-4140
    • Bosshard, P.P.1    Abels, S.2    Zbinden, R.3    Bottger, E.C.4    Altwegg, M.5
  • 8
    • 0033612120 scopus 로고    scopus 로고
    • Metabolites from the sponge Plakortis simplex. Determination of absolute stereochemistry of plakortin. Isolation and stereostructure of three plakortin related compounds
    • Cafieri F, Fattorusso E, Taglialatela-Scafati O, Lanaro A (1999) Metabolites from the sponge Plakortis simplex. Determination of absolute stereochemistry of plakortin. Isolation and stereostructure of three plakortin related compounds. Tetrahedron 55: 7045-7056.
    • (1999) Tetrahedron , vol.55 , pp. 7045-7056
    • Cafieri, F.1    Fattorusso, E.2    Taglialatela-Scafati, O.3    Lanaro, A.4
  • 9
    • 0035113276 scopus 로고    scopus 로고
    • The first naturally occurring α-methoxylated branched-chain fatty acids from the phospholipids of Amphimedon complanata
    • Carballeira NM, Alicea J (2001) The first naturally occurring α-methoxylated branched-chain fatty acids from the phospholipids of Amphimedon complanata. Lipids 36: 83-87.
    • (2001) Lipids , vol.36 , pp. 83-87
    • Carballeira, N.M.1    Alicea, J.2
  • 10
    • 0035024179 scopus 로고    scopus 로고
    • New methoxylated fatty acids from the Caribbean sponge Callyspongia fallax
    • Carballeira NM, Pagán M (2001) New methoxylated fatty acids from the Caribbean sponge Callyspongia fallax. J Nat Prod 64: 620-623.
    • (2001) J Nat Prod , vol.64 , pp. 620-623
    • Carballeira, N.M.1    Pagán, M.2
  • 11
    • 79551573188 scopus 로고    scopus 로고
    • Marine Streptomyces as a novel source of bioactive substances
    • Dharmaraj S (2010) Marine Streptomyces as a novel source of bioactive substances. World J Microbiol Biotechnol 26: 2123-2139.
    • (2010) World J Microbiol Biotechnol , vol.26 , pp. 2123-2139
    • Dharmaraj, S.1
  • 12
    • 0345346373 scopus 로고    scopus 로고
    • Horizontal gene transfer among bacteria in terrestrial and aquatic habitats as assessed by microcosm and field studies
    • Drge M, Pühler A, Selbitschka W (1999) Horizontal gene transfer among bacteria in terrestrial and aquatic habitats as assessed by microcosm and field studies. Biol Fertil Soils 29: 221-245.
    • (1999) Biol Fertil Soils , vol.29 , pp. 221-245
    • Drge, M.1    Pühler, A.2    Selbitschka, W.3
  • 14
    • 34848925453 scopus 로고    scopus 로고
    • Detection of actinobacteria cultivated from environmental samples reveals bias in universal primers
    • Farris MH, Olson JB (2007) Detection of actinobacteria cultivated from environmental samples reveals bias in universal primers. Lett Appl Microbiol 45: 376-381.
    • (2007) Lett Appl Microbiol , vol.45 , pp. 376-381
    • Farris, M.H.1    Olson, J.B.2
  • 17
    • 0014211361 scopus 로고
    • Construction of phylogenetic trees: a method based on mutation distances as estimated from cytochrome c sequences is of general applicability
    • Fitch WM, Margoliash E (1967) Construction of phylogenetic trees: a method based on mutation distances as estimated from cytochrome c sequences is of general applicability. Science 155: 279-284.
    • (1967) Science , vol.155 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 18
    • 0003437299 scopus 로고    scopus 로고
    • Version 3. 6. Department of Genetics University of Washington, Seattle, WA
    • Felsenstein J (2004) PHYLIP (Phylogenetic Inference Package). Version 3. 6. Department of Genetics University of Washington, Seattle, WA.
    • (2004) PHYLIP (Phylogenetic Inference Package)
    • Felsenstein, J.1
  • 20
    • 44449118067 scopus 로고    scopus 로고
    • Microbial biogeography: from taxonomy to traits
    • Green JL, Bohannan BJM, Whitaker RJ (2008) Microbial biogeography: from taxonomy to traits. Science 320: 1039-1042.
    • (2008) Science , vol.320 , pp. 1039-1042
    • Green, J.L.1    Bohannan, B.J.M.2    Whitaker, R.J.3
  • 22
    • 0025729508 scopus 로고
    • Secondary metabolites by chemical screening.15: structure and absolute configuration of naphthomevalin a new dihydro-naphthoquinone antibiotic from Streptomyces sp
    • Henkel T, Zeeck A (1990) Secondary metabolites by chemical screening. 15: structure and absolute configuration of naphthomevalin a new dihydro-naphthoquinone antibiotic from Streptomyces sp. J Antibiot 44: 665-669.
    • (1990) J Antibiot , vol.44 , pp. 665-669
    • Henkel, T.1    Zeeck, A.2
  • 24
    • 0031815972 scopus 로고    scopus 로고
    • Intergeneric transfer of conjugative and mobilizable plasmids harbored by Escherichia coli in the gut of the soil microarthropod Folsomia candida (Collembola)
    • Hoffman A, Thimm T, Dröge M, Moore ERB, Munch JC, Tebbe CC (1998) Intergeneric transfer of conjugative and mobilizable plasmids harbored by Escherichia coli in the gut of the soil microarthropod Folsomia candida (Collembola). Appl Environ Microbiol 64: 2652-265.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 2265-2652
    • Hoffman, A.1    Thimm, T.2    Dröge, M.3    Moore, E.R.B.4    Munch, J.C.5    Tebbe, C.C.6
  • 25
    • 77749243242 scopus 로고    scopus 로고
    • Sponge-derived Streptomyces producing isoprenoids via the mevalonate pathway
    • Izumikawa M, Khan ST, Takagi M, Shin-ya K (2010) Sponge-derived Streptomyces producing isoprenoids via the mevalonate pathway. J Nat Prod 73: 208-212.
    • (2010) J Nat Prod , vol.73 , pp. 208-212
    • Izumikawa, M.1    Khan, S.T.2    Takagi, M.3    Shin-Ya, K.4
  • 26
    • 20444488858 scopus 로고    scopus 로고
    • Culturable marine actinomycete diversity from tropical Pacific Ocean sediments
    • Jensen PR, Gontang E, Mafnas C, Mincer TJ, Fenical W (2005a) Culturable marine actinomycete diversity from tropical Pacific Ocean sediments. Environ Microbiol 7: 1039-1048.
    • (2005) Environ Microbiol , vol.7 , pp. 1039-1048
    • Jensen, P.R.1    Gontang, E.2    Mafnas, C.3    Mincer, T.J.4    Fenical, W.5
  • 28
    • 0025919185 scopus 로고
    • Distribution of actinomycetes in near-shore tropical marine sediments
    • Jensen PR, Dwight R, Fenical W (1991) Distribution of actinomycetes in near-shore tropical marine sediments. Appl Environ Microbiol 57: 1102-1108.
    • (1991) Appl Environ Microbiol , vol.57 , pp. 1102-1108
    • Jensen, P.R.1    Dwight, R.2    Fenical, W.3
  • 30
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of annurans
    • Kluge AG, Farris FS (1969) Quantitative phyletics and the evolution of annurans. Syst Zool 18: 1-32.
    • (1969) Syst Zool , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, F.S.2
  • 31
    • 0033971219 scopus 로고    scopus 로고
    • Intrageneric relationships among Micromonospora species deduced from gyrB-based phylogeny and DNA relatedness
    • Kasai H, Tamura T, Harayama S (2000) Intrageneric relationships among Micromonospora species deduced from gyrB-based phylogeny and DNA relatedness. Int J Syst Evol Micro 50: 127-134.
    • (2000) Int J Syst Evol Micro , vol.50 , pp. 127-134
    • Kasai, H.1    Tamura, T.2    Harayama, S.3
  • 32
    • 15944395584 scopus 로고    scopus 로고
    • Marine actinomycetes related to the 'Salinospora' group from the Great Barrier Reef sponge Pseudoceratina clavata
    • Kim TK, Garson MJ, Fuerst JA (2004) Marine actinomycetes related to the 'Salinospora' group from the Great Barrier Reef sponge Pseudoceratina clavata. Environ Microbiol 7: 509.
    • (2004) Environ Microbiol , vol.7 , pp. 509
    • Kim, T.K.1    Garson, M.J.2    Fuerst, J.A.3
  • 33
    • 59049107906 scopus 로고    scopus 로고
    • Potential effects of runoff, fluvial sediment, and nutrient discharges on the coral reefs of Puerto Rico
    • Larsen MC, Webb RMT (2009) Potential effects of runoff, fluvial sediment, and nutrient discharges on the coral reefs of Puerto Rico. J Coast Res 25: 189-208.
    • (2009) J Coast Res , vol.25 , pp. 189-208
    • Larsen, M.C.1    Webb, R.M.T.2
  • 34
    • 79959335131 scopus 로고    scopus 로고
    • Draft genome sequence of the marine bacterium Streptomyces griseoaurantiacus M045, which produces novel manumycin-type antibiotics with a pABA core component
    • Li F, Jiang P, Zheng H, Wang S, Zhao G, Qin S, Liu Z (2011) Draft genome sequence of the marine bacterium Streptomyces griseoaurantiacus M045, which produces novel manumycin-type antibiotics with a pABA core component. J Bacteriol 193: 3417-3418.
    • (2011) J Bacteriol , vol.193 , pp. 3417-3418
    • Li, F.1    Jiang, P.2    Zheng, H.3    Wang, S.4    Zhao, G.5    Qin, S.6    Liu, Z.7
  • 36
    • 32044441838 scopus 로고    scopus 로고
    • Culture-dependent and culture-independent diversity within obligate marine actinomycete genus Salinospora
    • Mincer TJ, Fenical W, Jensen PR (2005) Culture-dependent and culture-independent diversity within obligate marine actinomycete genus Salinospora. Appl Environ Microbiol 71: 7019-7028.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 7019-7028
    • Mincer, T.J.1    Fenical, W.2    Jensen, P.R.3
  • 39
    • 0024365215 scopus 로고
    • WS9659 A and B, novel testosterone 5α-reductase inhibitors isolated from a Streptomyces
    • Nakayama O, Yagi M, Tanaka M, Kiyoto S (1989) WS9659 A and B, novel testosterone 5α-reductase inhibitors isolated from a Streptomyces. J Antibiot 42: 1221-1229.
    • (1989) J Antibiot , vol.42 , pp. 1221-1229
    • Nakayama, O.1    Yagi, M.2    Tanaka, M.3    Kiyoto, S.4
  • 40
    • 70350722394 scopus 로고    scopus 로고
    • Genomic basis for natural product biosynthetic diversity in the actinomycetes
    • Nett M, Ikeda H, Moore BS (2009) Genomic basis for natural product biosynthetic diversity in the actinomycetes. Nat Prod Rep 6: 1362-1384.
    • (2009) Nat Prod Rep , vol.6 , pp. 1362-1384
    • Nett, M.1    Ikeda, H.2    Moore, B.S.3
  • 43
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 44
    • 84894403222 scopus 로고    scopus 로고
    • Control of fish bacterial pathogens, by antagonistic marine actinomycetes isolated from gulf of Mannar Coast
    • Saravanakumar R, Moomeen HS, Ronald J, Kannan M (2010) Control of fish bacterial pathogens, by antagonistic marine actinomycetes isolated from gulf of Mannar Coast. World J Fish & Marine Sci 4: 275-279.
    • (2010) World J Fish & Marine Sci , vol.4 , pp. 275-279
    • Saravanakumar, R.1    Moomeen, H.S.2    Ronald, J.3    Kannan, M.4
  • 45
    • 15444362001 scopus 로고    scopus 로고
    • DOTUR a computer based program for defining operational taxonomic units and estimating species richness
    • Schloss PD, Handelsman J (2005) DOTUR a computer based program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 71: 1501-1506.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 46
    • 45749130876 scopus 로고
    • Inhibition by antibiotics of the growth of bacterial and yeast protoplasts
    • Shockman GD, Lampen JO (1962) Inhibition by antibiotics of the growth of bacterial and yeast protoplasts. J Bacteriol 84: 508-512.
    • (1962) J Bacteriol , vol.84 , pp. 508-512
    • Shockman, G.D.1    Lampen, J.O.2
  • 48
    • 22544447348 scopus 로고    scopus 로고
    • Antibiotic terpenoid chloro-dihydroquinone from a new marine actinomycete
    • Soria-Mercado IE, Prieto-Davo A, Jensen PR, Fenical W (2005) Antibiotic terpenoid chloro-dihydroquinone from a new marine actinomycete. J Nat Prod 68: 904-910.
    • (2005) J Nat Prod , vol.68 , pp. 904-910
    • Soria-Mercado, I.E.1    Prieto-Davo, A.2    Jensen, P.R.3    Fenical, W.4
  • 50
    • 0030745477 scopus 로고    scopus 로고
    • Microbial flora in the deepest sea mud of the Mariana Trench
    • Takami H, Inoue A, Fuji F, Horikoshi K (1997) Microbial flora in the deepest sea mud of the Mariana Trench. FEMS Microbiol Lett 152: 279-285.
    • (1997) FEMS Microbiol Lett , vol.152 , pp. 279-285
    • Takami, H.1    Inoue, A.2    Fuji, F.3    Horikoshi, K.4
  • 51
    • 34250733462 scopus 로고    scopus 로고
    • Sponge-associated microorganisms: evolution, ecology, and biotechnological potential
    • Taylor MW, Radax R, Steger D, Wagner M (2007) Sponge-associated microorganisms: evolution, ecology, and biotechnological potential. Microbiol Mol Biol Rev 71: 295-347.
    • (2007) Microbiol Mol Biol Rev , vol.71 , pp. 295-347
    • Taylor, M.W.1    Radax, R.2    Steger, D.3    Wagner, M.4
  • 52
    • 77952574831 scopus 로고    scopus 로고
    • Marine drugs from sponge-microbe association- a review
    • Thomas TRA, Kavlekar DP, LokaBharathi PA (2010) Marine drugs from sponge-microbe association- a review. Drugs 8: 1417-1468.
    • (2010) Drugs , vol.8 , pp. 1417-1468
    • Thomas, T.R.A.1    Kavlekar, D.P.2    LokaBharathi, P.A.3
  • 53
    • 23944475626 scopus 로고    scopus 로고
    • Mechanisms of, and barriers to, horizontal gene transfer between bacteria
    • Thomas CM, Nielsen KM (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 3: 711-721.
    • (2005) Nat Rev Microbiol , vol.3 , pp. 711-721
    • Thomas, C.M.1    Nielsen, K.M.2
  • 54
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Comput Biol 22: 4673-4680.
    • (1994) Comput Biol , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 56
    • 0000393614 scopus 로고
    • Electron microscope study of the association between some sponges and bacteria
    • Vacelet J, Donadey C (1977) Electron microscope study of the association between some sponges and bacteria. J Exp Biol Ecol 30: 301-314.
    • (1977) J Exp Biol Ecol , vol.30 , pp. 301-314
    • Vacelet, J.1    Donadey, C.2
  • 58
    • 84879781388 scopus 로고
    • Common sponges
    • In: Kaplan E. H. (ed), The Peterson Field Guide Series, Houghton Mifflin Company, Bosto
    • Vicente VP (1982) Common sponges. In: Kaplan E. H. (ed) A field guide to coral reefs (Caribbean and Florida). The Peterson Field Guide Series, Houghton Mifflin Company, Boston, pp. 127-133.
    • (1982) A field guide to coral reefs (Caribbean and Florida) , pp. 127-133
    • Vicente, V.P.1
  • 59
    • 0000066433 scopus 로고
    • Factors affecting enumerations and isolation of actinomycetes from Chesapeake Bay and Southeastern Atlantic Ocean Sediments
    • Walker JD, Colwell RR (1975) Factors affecting enumerations and isolation of actinomycetes from Chesapeake Bay and Southeastern Atlantic Ocean Sediments. Mar Biol 30: 193-201.
    • (1975) Mar Biol , vol.30 , pp. 193-201
    • Walker, J.D.1    Colwell, R.R.2
  • 60
    • 0034752042 scopus 로고    scopus 로고
    • How many antibiotics are produced by the genus Streptomyces?
    • Watve MG, Tickoo R, Jog MM, Bhole BD (2001) How many antibiotics are produced by the genus Streptomyces? Arch Microbiol 176: 386-390.
    • (2001) Arch Microbiol , vol.176 , pp. 386-390
    • Watve, M.G.1    Tickoo, R.2    Jog, M.M.3    Bhole, B.D.4
  • 61
    • 0035158608 scopus 로고    scopus 로고
    • Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloides odorabile
    • Webster NS, Wilson KJ, Blackall LL, Hill RT (2001) Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloides odorabile. Appl Environ Microbiol 67: 434-444.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 434-444
    • Webster, N.S.1    Wilson, K.J.2    Blackall, L.L.3    Hill, R.T.4
  • 62
    • 79953229556 scopus 로고    scopus 로고
    • Lobophorin c and d, new kijanimicin derivatives from a marine sponge-associated actinomycetal strain AZS17
    • Wei RB, Xi T, Li J, Wang P, Li FC, Lin YC, Qin S (2011) Lobophorin c and d, new kijanimicin derivatives from a marine sponge-associated actinomycetal strain AZS17. Mar Drugs 9: 359-368.
    • (2011) Mar Drugs , vol.9 , pp. 359-368
    • Wei, R.B.1    Xi, T.2    Li, J.3    Wang, P.4    Li, F.C.5    Lin, Y.C.6    Qin, S.7
  • 63
    • 36148995894 scopus 로고    scopus 로고
    • Novel ring B abeo-sterols as growth inhibitors of Mycobacterium tuberculosis isolated from a Caribbean Sea sponge, Svenzea zeai
    • Wei X, Rodriguez AD, Wang Y, Franzblau SG (2007) Novel ring B abeo-sterols as growth inhibitors of Mycobacterium tuberculosis isolated from a Caribbean Sea sponge, Svenzea zeai. Tetrahedron 48: 8851-8854.
    • (2007) Tetrahedron , vol.48 , pp. 8851-8854
    • Wei, X.1    Rodriguez, A.D.2    Wang, Y.3    Franzblau, S.G.4
  • 64
    • 33747657075 scopus 로고    scopus 로고
    • Culturable actinobacteria from the marine sponge Hymeniacidon perleve: isolation and phylogenetic diversity by 16S rRNA gene-RFLP analysis
    • Zhang H, Lee YK, Zhang W, Lee HK (2006) Culturable actinobacteria from the marine sponge Hymeniacidon perleve: isolation and phylogenetic diversity by 16S rRNA gene-RFLP analysis. Antonie van Leeuwenhoek 90: 159-169.
    • (2006) Antonie Van Leeuwenhoek , vol.90 , pp. 159-169
    • Zhang, H.1    Lee, Y.K.2    Zhang, W.3    Lee, H.K.4


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