메뉴 건너뛰기




Volumn 193, Issue 14, 2011, Pages 3691-3692

Draft genome sequence of the marine Streptomyces sp. strain PP-C42, isolated from the Baltic Sea

Author keywords

[No Author keywords available]

Indexed keywords

POLYPEPTIDE ANTIBIOTIC AGENT;

EID: 79960394911     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05097-11     Document Type: Note
Times cited : (16)

References (18)
  • 2
    • 0035875343 scopus 로고    scopus 로고
    • GeneMarkS: a selftraining method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions
    • Besemer, J., A. Lomsadze, and M. Borodovsky. 2001. GeneMarkS: a selftraining method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions. Nucleic Acids Res. 29:2607-2618.
    • (2001) Nucleic Acids Res , vol.29 , pp. 2607-2618
    • Besemer, J.1    Lomsadze, A.2    Borodovsky, M.3
  • 3
    • 67650704883 scopus 로고    scopus 로고
    • A lytic enzyme cocktail from Streptomyces sp. B578 for the control of lactic and acetic acid bacteria in wine
    • Blättel, V., et al. 2009. A lytic enzyme cocktail from Streptomyces sp. B578 for the control of lactic and acetic acid bacteria in wine. Appl. Microbiol. Biotechnol. 83:839-48.
    • (2009) Appl. Microbiol. Biotechnol. , vol.83 , pp. 839-848
    • Blättel, V.1
  • 4
    • 77957092532 scopus 로고    scopus 로고
    • Isolation of soil Streptomyces as source antibiotics active against antibiotic-resistant bacteria
    • Ceylan, O., G. Okmen, and A. Ugur. 2008. Isolation of soil Streptomyces as source antibiotics active against antibiotic-resistant bacteria. Eurasia J. Bio-Sci. 2:73-82.
    • (2008) Eurasia J. Bio-Sci. , vol.2 , pp. 73-82
    • Ceylan, O.1    Okmen, G.2    Ugur, A.3
  • 6
    • 27644520345 scopus 로고    scopus 로고
    • PenBase, the shrimp antimicrobial peptide penaeidin database: sequence-based classification and recommended nomenclature
    • Gueguen, Y., et al. 2006. PenBase, the shrimp antimicrobial peptide penaeidin database: sequence-based classification and recommended nomenclature. Dev. Comp. mmunol. 30:283-288.
    • (2006) Dev. Comp. Immunol. , vol.30 , pp. 283-288
    • Gueguen, Y.1
  • 7
    • 79960435388 scopus 로고    scopus 로고
    • Production of pectinolytic enzymes using Streptomyces strains isolated from palm grove soil in Biskra area(Algeria)
    • Ladjama, A., Z. Taibi, and A. Meddour. 2007. Production of pectinolytic enzymes using Streptomyces strains isolated from palm grove soil in Biskra area(Algeria). Afr. rop Sci. Conf. Proc. 8:1155-1158.
    • (2007) Afr. Crop Sci. Conf. Proc. , vol.8 , pp. 1155-1158
    • Ladjama, A.1    Taibi, Z.2    Meddour, A.3
  • 8
    • 34250665888 scopus 로고    scopus 로고
    • RNAmmer: consistent and rapid annotation of ribosomal RNA genes
    • Lagesen, K., et al. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
    • (2007) Nucleic Acids Res , vol.35 , pp. 3100-3108
    • Lagesen, K.1
  • 9
    • 79952592810 scopus 로고    scopus 로고
    • A fast, lock-free approach for efficient parallel counting of occurrences of k-mers
    • Marçais, G., and C. Kingsford. 2011. A fast, lock-free approach for efficient parallel counting of occurrences of k-mers. Bioinformatics 27:764-770.
    • (2011) Bioinformatics , vol.27 , pp. 764-770
    • Marçais, G.1    Kingsford, C.2
  • 10
    • 0028849641 scopus 로고
    • Evidence for indigenous Streptomyces populations in a marine environment determined with a 16S rRNA probe
    • Moran, M. A., L. T. Rutherford, and R. E. Hodson. 1995. Evidence for indigenous Streptomyces populations in a marine environment determined with a 16S rRNA probe. ppl. Environ. Microbiol. 61:3695-3700.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 3695-3700
    • Moran, M.A.1    Rutherford, L.T.2    Hodson, R.E.3
  • 11
    • 70350722394 scopus 로고    scopus 로고
    • Genomic basis for natural product biosynthetic diversity in the actinomycetes
    • Nett, M., H. Ikeda, and B. S. Moore. 2009. Genomic basis for natural product biosynthetic diversity in the actinomycetes. Nat. Prod. Rep. 26:1362-1384.
    • (2009) Nat. Prod. Rep. , vol.26 , pp. 1362-1384
    • Nett, M.1    Ikeda, H.2    Moore, B.S.3
  • 12
    • 44349169524 scopus 로고    scopus 로고
    • Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350
    • Ohnishi, Y., et al. 2008. Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350. J. Bacteriol. 190:4050-4060.
    • (2008) J. Bacteriol. , vol.190 , pp. 4050-4060
    • Ohnishi, Y.1
  • 13
    • 33744728757 scopus 로고    scopus 로고
    • Diversity of actinomycetes isolated from Challenger Deep sediment (10,898 m) from the Mariana Trench
    • Pathom-Aree, W., et al. 2006. Diversity of actinomycetes isolated from Challenger Deep sediment (10,898 m) from the Mariana Trench. Extremophiles 10:181-189.
    • (2006) Extremophiles , vol.10 , pp. 181-189
    • Pathom-Aree, W.1
  • 14
    • 23144460836 scopus 로고    scopus 로고
    • The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs
    • Schattner, P., A. N. Brooks, and T. M. Lowe. 2005. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 3:W686-689.
    • (2005) Nucleic Acids Res , vol.33
    • Schattner, P.1    Brooks, A.N.2    Lowe, T.M.3
  • 16
    • 38549134937 scopus 로고    scopus 로고
    • CyBase: a database of cyclic protein sequences and structures, with applications in protein discovery and engineering
    • Wang, C. K., Q. Kaas, L. Chiche, and D. J. Craik. 2008. CyBase: a database of cyclic protein sequences and structures, with applications in protein discovery and engineering. Nucleic Acids Res. 36:D206-210.
    • (2008) Nucleic Acids Res , vol.36
    • Wang, C.K.1    Kaas, Q.2    Chiche, L.3    Craik, D.J.4
  • 17
    • 58149187882 scopus 로고    scopus 로고
    • APD2: the updated antimicrobial peptide database and its application in peptide design
    • Wang, G., X. Li, and Z. Wang. 2009. APD2: the updated antimicrobial peptide database and its application in peptide design. Nucleic Acids Res. 37:D933-937.
    • (2009) Nucleic Acids Res , vol.37
    • Wang, G.1    Li, X.2    Wang, Z.3
  • 18
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino, D. R., and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
    • (2008) Genome Res , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.