-
1
-
-
0034646406
-
Protein Folding and Unfolding on a Complex Energy Landscape
-
Leeson, D. T.; Gai, F.; Rodriguez, H. M.; Gregoret, L. M.; Dyer, R. B. Protein Folding and Unfolding on a Complex Energy Landscape Proc. Natl. Acad. Sci. U.S.A. 2000, 6, 2527-2532
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.6
, pp. 2527-2532
-
-
Leeson, D.T.1
Gai, F.2
Rodriguez, H.M.3
Gregoret, L.M.4
Dyer, R.B.5
-
2
-
-
0037438511
-
Using Nitrile-Derivatized Amino Acids as Infrared Probes of Local Environment
-
Getahun, Z.; Huang, C. Y.; Wang, T.; DeLeon, B.; DeGrado, W. F.; Gai, F. Using Nitrile-Derivatized Amino Acids as Infrared Probes of Local Environment J. Am. Chem. Soc. 2003, 125, 405-411
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 405-411
-
-
Getahun, Z.1
Huang, C.Y.2
Wang, T.3
Deleon, B.4
Degrado, W.F.5
Gai, F.6
-
3
-
-
33746017658
-
Electric Fields at the Active Site of an Enzyme: Direct Comparison of Experiment with Theory
-
Suydam, I. T.; Snow, C. D.; Pande, V. S.; Boxer, S. G. Electric Fields at the Active Site of an Enzyme: Direct Comparison of Experiment with Theory Science 2006, 313, 200-204
-
(2006)
Science
, vol.313
, pp. 200-204
-
-
Suydam, I.T.1
Snow, C.D.2
Pande, V.S.3
Boxer, S.G.4
-
4
-
-
33750039654
-
Site-Specific Conversion of Cysteine Thiols into Thiocyanate Creates an IR Probe for Electric Fields in Proteins
-
Fafarman, A. T.; Webb, L. J.; Chuang, J. I.; Boxer, S. G. Site-Specific Conversion of Cysteine Thiols into Thiocyanate Creates an IR Probe for Electric Fields in Proteins J. Am. Chem. Soc. 2006, 128, 13356-13357
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 13356-13357
-
-
Fafarman, A.T.1
Webb, L.J.2
Chuang, J.I.3
Boxer, S.G.4
-
5
-
-
33645517136
-
Elucidation of Residue-Level Structure and Dynamics of Polypeptides via Isotope-Edited Infrared Spectroscopy
-
Decatur, S. M. Elucidation of Residue-Level Structure and Dynamics of Polypeptides via Isotope-Edited Infrared Spectroscopy Acc. Chem. Res. 2006, 39, 169-175
-
(2006)
Acc. Chem. Res.
, vol.39
, pp. 169-175
-
-
Decatur, S.M.1
-
6
-
-
33947413082
-
Residue Specific Resolution of Protein Folding Dynamics Using Isotope-Edited Infrared Temperature Jump Spectroscopy
-
Brewer, S. H.; Song, B.; Raleigh, D. P.; Dye, R. B. Residue Specific Resolution of Protein Folding Dynamics Using Isotope-Edited Infrared Temperature Jump Spectroscopy Biochemistry 2007, 46, 3279-3285
-
(2007)
Biochemistry
, vol.46
, pp. 3279-3285
-
-
Brewer, S.H.1
Song, B.2
Raleigh, D.P.3
Dye, R.B.4
-
7
-
-
39649095185
-
Evidence for Coupling between Nitrile Groups Using DNA Templates: A Promising New Method for Monitoring Structures with Infrared Spectroscopy
-
Krummel, A. T.; Zanni, M. T. Evidence for Coupling between Nitrile Groups Using DNA Templates: A Promising New Method for Monitoring Structures with Infrared Spectroscopy J. Phys. Chem. B 2008, 112, 1336-1338
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 1336-1338
-
-
Krummel, A.T.1
Zanni, M.T.2
-
8
-
-
77951877209
-
Tracking G-Protein-Coupled Receptor Activation Using Genetically Encoded Infrared Probes
-
Ye, S.; Zaitseva, E.; Caltabiano, G.; Schertler, G. F. X.; Sakmar, T. P.; Deupi, X.; Vogel, R. Tracking G-Protein-Coupled Receptor Activation Using Genetically Encoded Infrared Probes Nature 2010, 464, 1386-1389
-
(2010)
Nature
, vol.464
, pp. 1386-1389
-
-
Ye, S.1
Zaitseva, E.2
Caltabiano, G.3
Schertler, G.F.X.4
Sakmar, T.P.5
Deupi, X.6
Vogel, R.7
-
9
-
-
77957576143
-
Azidohomoalanine: A Conformationally Sensitive IR Probe of Protein Folding, Protein Structure, and Electrostatics
-
Taskent-Sezgin, H.; Chung, J.; Banerjee, P. S.; Nagarajan, S.; Dyer, R. B.; Carrico, I.; Raleigh, D. P. Azidohomoalanine: A Conformationally Sensitive IR Probe of Protein Folding, Protein Structure, and Electrostatics Angew. Chem., Int. Ed. 2010, 49, 7473-7475
-
(2010)
Angew. Chem., Int. Ed.
, vol.49
, pp. 7473-7475
-
-
Taskent-Sezgin, H.1
Chung, J.2
Banerjee, P.S.3
Nagarajan, S.4
Dyer, R.B.5
Carrico, I.6
Raleigh, D.P.7
-
10
-
-
80052352163
-
Azido Homoalanine is a Useful Infrared Probe for Monitoring Local Electrostatistics and Side-Chain Solvation in Proteins
-
Choi, J.-H.; Raleigh, D.; Cho, M. Azido Homoalanine is a Useful Infrared Probe for Monitoring Local Electrostatistics and Side-Chain Solvation in Proteins J. Phys. Chem. Lett. 2011, 2, 2158-2162
-
(2011)
J. Phys. Chem. Lett.
, vol.2
, pp. 2158-2162
-
-
Choi, J.-H.1
Raleigh, D.2
Cho, M.3
-
11
-
-
79251555334
-
2D IR Photon Echo of Azido-Probes for Biomolecular Dynamics
-
Tucker, M. J.; Gai, X. S.; Fenlon, E. E.; Brewer, S. H.; Hochstrasser, R. M. 2D IR Photon Echo of Azido-Probes for Biomolecular Dynamics Phys. Chem. Chem. Phys. 2011, 13, 2237-2241
-
(2011)
Phys. Chem. Chem. Phys.
, vol.13
, pp. 2237-2241
-
-
Tucker, M.J.1
Gai, X.S.2
Fenlon, E.E.3
Brewer, S.H.4
Hochstrasser, R.M.5
-
12
-
-
84865974861
-
Expanding the Utility of 4-Cyano-L-Phenylalanine as a Vibrational Reporter of Protein Environments
-
Bazewicz, C. G.; Lipkin, J. S.; Smith, E. E.; Liskov, M. T.; Brewer, S. H. Expanding the Utility of 4-Cyano-L-Phenylalanine as a Vibrational Reporter of Protein Environments J. Phys. Chem. B 2012, 116, 10824-10831
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 10824-10831
-
-
Bazewicz, C.G.1
Lipkin, J.S.2
Smith, E.E.3
Liskov, M.T.4
Brewer, S.H.5
-
13
-
-
80054955089
-
Site-Specific Spectroscopic Reporters of the Local Electric Field, Hydration, Structure, and Dynamics of Biomolecules
-
Waegele, M. M.; Culick, R. M.; Gai, F. Site-Specific Spectroscopic Reporters of the Local Electric Field, Hydration, Structure, and Dynamics of Biomolecules J. Phys. Chem. Lett. 2012, 2, 2598-2609
-
(2012)
J. Phys. Chem. Lett.
, vol.2
, pp. 2598-2609
-
-
Waegele, M.M.1
Culick, R.M.2
Gai, F.3
-
14
-
-
84859578791
-
Dynamics Measured Using a Nitrile Label with 2D IR Vibrational Echo Spectroscopy
-
Bagchi, S.; Boxer, S. G.; Fayer, M. D.; Ribonuclease, S. Dynamics Measured Using a Nitrile Label with 2D IR Vibrational Echo Spectroscopy J. Phys. Chem. B 2012, 116, 4034-4042
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 4034-4042
-
-
Bagchi, S.1
Boxer, S.G.2
Fayer, M.D.3
Ribonuclease, S.4
-
15
-
-
84860232628
-
Two-Dimensional Infrared Spectroscopy Reveals the Complex Behaviour of an Amyloid Fibril Inhibitor
-
Middleton, C. T.; Marek, P.; Cao, P.; Chiu, C.-C.; Singh, S.; Woys, A. M.; De Pablo, J. J.; Raleigh, D. P.; Zanni, M. T. Two-Dimensional Infrared Spectroscopy Reveals the Complex Behaviour of an Amyloid Fibril Inhibitor Nat. Chem. 2012, 4, 355-360
-
(2012)
Nat. Chem.
, vol.4
, pp. 355-360
-
-
Middleton, C.T.1
Marek, P.2
Cao, P.3
Chiu, C.-C.4
Singh, S.5
Woys, A.M.6
De Pablo, J.J.7
Raleigh, D.P.8
Zanni, M.T.9
-
16
-
-
0345973734
-
Vibrational Energy Relaxation of the Cyanide Ion in Water
-
Hamm, P.; Lim, M.; Hochstrasser, R. M. Vibrational Energy Relaxation of the Cyanide Ion in Water J. Chem. Phys. 1997, 107, 10523
-
(1997)
J. Chem. Phys.
, vol.107
, pp. 10523
-
-
Hamm, P.1
Lim, M.2
Hochstrasser, R.M.3
-
17
-
-
0037961618
-
Vibrational Energy Relaxation of Aqueous Azide Ion Confined in Reverse Micelles
-
Zhong, Q.; Baronavski, A. P.; Owrutsky, J. C. Vibrational Energy Relaxation of Aqueous Azide Ion Confined in Reverse Micelles J. Chem. Phys. 2003, 118, 7074-7080
-
(2003)
J. Chem. Phys.
, vol.118
, pp. 7074-7080
-
-
Zhong, Q.1
Baronavski, A.P.2
Owrutsky, J.C.3
-
18
-
-
3042677881
-
Hydrogen-Bond Dynamics of Water in Ionic Solutions
-
Bakker, H. J.; Kropman, M. F.; Omta, A. W.; Woutersen, S. Hydrogen-Bond Dynamics of Water in Ionic Solutions Phys. Scr. 2004, 69, C14-C24
-
(2004)
Phys. Scr.
, vol.69
-
-
Bakker, H.J.1
Kropman, M.F.2
Omta, A.W.3
Woutersen, S.4
-
19
-
-
22944443261
-
Local Hydrogen Bonding Dynamics and Collective Reorganization in Water: Ultrafast Infrared Spectroscopy of HOD/DO
-
Fecko, C. J.; Loparo, J. J.; Roberts, S. T.; Tokmakoff, A. Local Hydrogen Bonding Dynamics and Collective Reorganization in Water: Ultrafast Infrared Spectroscopy of HOD/DO J. Chem. Phys. 2005, 122, 054506
-
(2005)
J. Chem. Phys.
, vol.122
, pp. 054506
-
-
Fecko, C.J.1
Loparo, J.J.2
Roberts, S.T.3
Tokmakoff, A.4
-
20
-
-
23844509509
-
Chemical Exchange 2D IR of Hydrogen-Bond Making and Breaking
-
Kim, Y. S.; Hochstrasser, R. M. Chemical Exchange 2D IR of Hydrogen-Bond Making and Breaking Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 11185-11190
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 11185-11190
-
-
Kim, Y.S.1
Hochstrasser, R.M.2
-
21
-
-
35548982741
-
The CN Stretching Band of Aliphatic Thiocyanate Is Sensitive to Solvent Dynamics and Specific Solvation
-
Maienschein-Cline, M. G.; Londergan, C. H. The CN Stretching Band of Aliphatic Thiocyanate Is Sensitive to Solvent Dynamics and Specific Solvation J. Phys. Chem. A 2007, 111, 10020-10025
-
(2007)
J. Phys. Chem. A
, vol.111
, pp. 10020-10025
-
-
Maienschein-Cline, M.G.1
Londergan, C.H.2
-
22
-
-
51049097258
-
Solute-Solvent Complex Kinetics and Thermodynamics Probed by 2D-IR Vibrational Echo Chemical Exchange Spectroscopy
-
Zheng, J.; Fayer, M. D. Solute-Solvent Complex Kinetics and Thermodynamics Probed by 2D-IR Vibrational Echo Chemical Exchange Spectroscopy J. Phys. Chem. B 2008, 112, 10221-10227
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 10221-10227
-
-
Zheng, J.1
Fayer, M.D.2
-
23
-
-
84859542624
-
Ultrafast Internal Rotational Dynamics of the Azido Group in (4S)-Azidoproline: Chemical Exchange 2DIR Spectroscopic Investigations
-
Lee, K.-K.; Park, K.-H.; Joo, C.; Kwon, H.-J.; Han, H.; Ha, J.-H.; Park, S.; Cho, M. Ultrafast Internal Rotational Dynamics of the Azido Group in (4S)-Azidoproline: Chemical Exchange 2DIR Spectroscopic Investigations Chem. Phys. 2012, 396, 23-29
-
(2012)
Chem. Phys.
, vol.396
, pp. 23-29
-
-
Lee, K.-K.1
Park, K.-H.2
Joo, C.3
Kwon, H.-J.4
Han, H.5
Ha, J.-H.6
Park, S.7
Cho, M.8
-
24
-
-
0036007873
-
Insights on the Conformational Stability of Collagen
-
Jenkins, C. L.; Raines, R. T. Insights on the Conformational Stability of Collagen Nat. Prod. Rep. 2002, 19, 49-59
-
(2002)
Nat. Prod. Rep.
, vol.19
, pp. 49-59
-
-
Jenkins, C.L.1
Raines, R.T.2
-
25
-
-
27744608733
-
Cis-Trans Isomerization at a Proline Opens the Pore of a Neurotransmitter-Gated Ion Channel
-
Lummis, S. C. R.; Beene, D. L.; Lee, L. W.; Lester, H. A.; Broadhurst, R. W.; Dougherty, D. A. Cis-Trans Isomerization at a Proline Opens the Pore of a Neurotransmitter-Gated Ion Channel Nature 2005, 438, 248-252
-
(2005)
Nature
, vol.438
, pp. 248-252
-
-
Lummis, S.C.R.1
Beene, D.L.2
Lee, L.W.3
Lester, H.A.4
Broadhurst, R.W.5
Dougherty, D.A.6
-
26
-
-
27744438169
-
Principal Pathway Coupling Agonist Binding to Channel Gating in Nicotinic Receptors
-
Lee, W. Y.; Sine, S. M. Principal Pathway Coupling Agonist Binding to Channel Gating in Nicotinic Receptors Nature 2005, 438, 243-247
-
(2005)
Nature
, vol.438
, pp. 243-247
-
-
Lee, W.Y.1
Sine, S.M.2
-
27
-
-
17444415358
-
Molecular Structure of the Collagen Triple Helix
-
Brodsky, B.; Persikov, A. V. Molecular Structure of the Collagen Triple Helix Adv. Protein Chem. 2005, 70, 301-339
-
(2005)
Adv. Protein Chem.
, vol.70
, pp. 301-339
-
-
Brodsky, B.1
Persikov, A.V.2
-
28
-
-
33645300736
-
The Prolyl Isomerase Pin1 Regulates Amyloid Precursor Protein Processing and Amyloid-beta Production
-
Pastorino, L.; Sun, A.; Lu, P.-J.; Zhou, X. Z.; Balastik, M.; Finn, G.; Wulf, G.; Lim, J.; Li, S.-H.; Li, X.; Xia, W.; Nicholson, L. K.; Lu, K. P. The Prolyl Isomerase Pin1 Regulates Amyloid Precursor Protein Processing and Amyloid-beta Production Nature 2006, 440, 528-534
-
(2006)
Nature
, vol.440
, pp. 528-534
-
-
Pastorino, L.1
Sun, A.2
Lu, P.-J.3
Zhou, X.Z.4
Balastik, M.5
Finn, G.6
Wulf, G.7
Lim, J.8
Li, S.-H.9
Li, X.10
Xia, W.11
Nicholson, L.K.12
Lu, K.P.13
-
29
-
-
0037126686
-
Proline Cis-Trans Isomerization and Protein Folding
-
Wedemeyer, W. J.; Welker, E.; Scheraga, H. A. Proline Cis-Trans Isomerization and Protein Folding Biochemistry 2002, 41, 14637-14644
-
(2002)
Biochemistry
, vol.41
, pp. 14637-14644
-
-
Wedemeyer, W.J.1
Welker, E.2
Scheraga, H.A.3
-
30
-
-
34548660854
-
Prolyl Cis-Trans Isomerization as a Molecular Timer
-
Lu, K. P.; Finn, G.; Lee, T. H.; Nicholson, L. K. Prolyl Cis-Trans Isomerization as a Molecular Timer Nat. Chem. Biol. 2007, 3, 619-629
-
(2007)
Nat. Chem. Biol.
, vol.3
, pp. 619-629
-
-
Lu, K.P.1
Finn, G.2
Lee, T.H.3
Nicholson, L.K.4
-
31
-
-
0038245117
-
An Electronic Effect on Protein Structure
-
Hinderaker, M. P.; Raines, R. T. An Electronic Effect on Protein Structure Protein Sci. 2003, 12, 1188-1194
-
(2003)
Protein Sci.
, vol.12
, pp. 1188-1194
-
-
Hinderaker, M.P.1
Raines, R.T.2
-
32
-
-
77955875331
-
N → π* Interactions in Proteins
-
Bartlett, G. J.; Choudhary, A.; Raines, R. T.; Woolfson, D. N. n → π* Interactions in Proteins Nat. Chem. Biol. 2010, 6, 615-620
-
(2010)
Nat. Chem. Biol.
, vol.6
, pp. 615-620
-
-
Bartlett, G.J.1
Choudhary, A.2
Raines, R.T.3
Woolfson, D.N.4
-
33
-
-
84859528807
-
Infrared Probing of 4-Azidoproline Conformations Modulated by Azido Group Configurations
-
Lee, K.-K.; Park, K.-H.; Joo, C.; Kwon, H.-J.; Jeon, J.; Jung, H.-I.; Park, S.; Han, H.; Cho, M. Infrared Probing of 4-Azidoproline Conformations Modulated by Azido Group Configurations J. Phys. Chem. B 2012, 116, 5097-5110
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 5097-5110
-
-
Lee, K.-K.1
Park, K.-H.2
Joo, C.3
Kwon, H.-J.4
Jeon, J.5
Jung, H.-I.6
Park, S.7
Han, H.8
Cho, M.9
-
36
-
-
10944258763
-
Watching Hydrogen Bonds Break: A Transient Absorption Study of Water
-
Steinel, T.; Asbury, J. B.; Zheng, J. R.; Fayer, M. D. Watching Hydrogen Bonds Break: A Transient Absorption Study of Water J. Phys. Chem. A 2004, 108, 10957-10964
-
(2004)
J. Phys. Chem. A
, vol.108
, pp. 10957-10964
-
-
Steinel, T.1
Asbury, J.B.2
Zheng, J.R.3
Fayer, M.D.4
-
37
-
-
33646450410
-
Testing the Core/shell Model of Nanoconfined Water in Reverse Micelles Using Linear and Nonlinear IR Spectroscopy
-
Piletic, I. R.; Moilanen, D. E.; Spry, D. B.; Levinger, N. E.; Fayer, M. D. Testing the Core/shell Model of Nanoconfined Water in Reverse Micelles Using Linear and Nonlinear IR Spectroscopy J. Phys. Chem. A 2006, 110, 4985-4999
-
(2006)
J. Phys. Chem. A
, vol.110
, pp. 4985-4999
-
-
Piletic, I.R.1
Moilanen, D.E.2
Spry, D.B.3
Levinger, N.E.4
Fayer, M.D.5
-
39
-
-
77649321444
-
Ultrafast Vibrational Spectroscopy of Cyanophenols
-
Lee, K.-K.; Park, K.-H.; Choi, J.-H.; Ha, J.-H.; Jeon, S.-J.; Cho, M. Ultrafast Vibrational Spectroscopy of Cyanophenols J. Phys. Chem. A 2010, 114, 2757-2767
-
(2010)
J. Phys. Chem. A
, vol.114
, pp. 2757-2767
-
-
Lee, K.-K.1
Park, K.-H.2
Choi, J.-H.3
Ha, J.-H.4
Jeon, S.-J.5
Cho, M.6
|