-
1
-
-
43049183306
-
Plant DELLAs restrain growth and promote survival of adversity by reducing the levels of reactive oxygen species
-
Achard, P., Renou, J.-P., Berthomé, R., Harberd, N.P., and Genschik, P. (2008). Plant DELLAs restrain growth and promote survival of adversity by reducing the levels of reactive oxygen species. Curr. Biol. 18: 656-660.
-
(2008)
Curr. Biol
, vol.18
, pp. 656-660
-
-
Achard, P.1
Renou, J.-P.2
Berthomé, R.3
Harberd, N.P.4
Genschik, P.5
-
2
-
-
60449089632
-
Molecular interactions between light and hormone signaling to control plant growth
-
Alabadí, D., and Blázquez, M.A. (2009). Molecular interactions between light and hormone signaling to control plant growth. Plant Mol. Biol. 69: 409-417.
-
(2009)
Plant Mol. Biol
, vol.69
, pp. 409-417
-
-
Alabadí, D.1
Blázquez, M.A.2
-
3
-
-
33746428382
-
Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation
-
Al-Sady, B., Ni, W., Kircher, S., Schäfer, E., and Quail, P.H. (2006). Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation. Mol. Cell 23: 439-446.
-
(2006)
Mol. Cell
, vol.23
, pp. 439-446
-
-
Al-Sady, B.1
Ni, W.2
Kircher, S.3
Schäfer, E.4
Quail, P.H.5
-
4
-
-
3242715114
-
Reactive oxygen species: Metabolism, oxidative stress, and signal transduction
-
Apel, K., and Hirt, H.R. (2004). Reactive oxygen species: Metabolism, oxidative stress, and signal transduction. Annu. Rev. Plant Biol. 55: 373-399.
-
(2004)
Annu. Rev. Plant Biol
, vol.55
, pp. 373-399
-
-
Apel, K.1
Hirt, H.R.2
-
5
-
-
2942685745
-
Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis
-
Bauer, D., Viczián, A., Kircher, S., Nobis, T., Nitschke, R., Kunkel, T., Panigrahi, K.C., Adám, E., Fejes, E., Schäfer, E., and Nagy, F. (2004). Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis. Plant Cell 16: 1433-1445.
-
(2004)
Plant Cell
, vol.16
, pp. 1433-1445
-
-
Bauer, D.1
Viczián, A.2
Kircher, S.3
Nobis, T.4
Nitschke, R.5
Kunkel, T.6
Panigrahi, K.C.7
Adám, E.8
Fejes, E.9
Schäfer, E.10
Nagy, F.11
-
6
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y., and Hochberg, Y. (1995). Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Stat. Soc. B 57: 289-300.
-
(1995)
J. R. Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
7
-
-
0032476584
-
Multiple transcriptional activation complexes tether the yeast activator Met4 to DNA
-
Blaiseau, P.L., and Thomas, D. (1998). Multiple transcriptional activation complexes tether the yeast activator Met4 to DNA. EMBO J. 17: 6327-6336.
-
(1998)
EMBO J
, vol.17
, pp. 6327-6336
-
-
Blaiseau, P.L.1
Thomas, D.2
-
8
-
-
12344269924
-
GO::TermFinder-Open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes
-
Boyle, E.I., Weng, S., Gollub, J., Jin, H., Botstein, D., Cherry, J.M., and Sherlock, G. (2004). GO:TermFinder-Open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes. Bioinformatics 20: 3710-3715.
-
(2004)
Bioinformatics
, vol.20
, pp. 3710-3715
-
-
Boyle, E.I.1
Weng, S.2
Gollub, J.3
Jin, H.4
Botstein, D.5
Cherry, J.M.6
Sherlock, G.7
-
9
-
-
80054039874
-
Dimerization and blue light regulation of PIF1 interacting bHLH proteins in Arabidopsis
-
Bu, Q.Y., Castillon, A., Chen, F.L., Zhu, L., and Huq, E. (2011). Dimerization and blue light regulation of PIF1 interacting bHLH proteins in Arabidopsis. Plant Mol. Biol. 77: 501-511.
-
(2011)
Plant Mol. Biol
, vol.77
, pp. 501-511
-
-
Bu, Q.Y.1
Castillon, A.2
Chen, F.L.3
Zhu, L.4
Huq, E.5
-
10
-
-
35548942264
-
Phytochrome Interacting Factors: Central players in phytochrome-mediated light signaling networks
-
Castillon, A., Shen, H., and Huq, E. (2007). Phytochrome Interacting Factors: Central players in phytochrome-mediated light signaling networks. Trends Plant Sci. 12: 514-521.
-
(2007)
Trends Plant Sci
, vol.12
, pp. 514-521
-
-
Castillon, A.1
Shen, H.2
Huq, E.3
-
11
-
-
80053623640
-
Integration of low temperature and light signaling during cold acclimation response in Arabidopsis
-
Catalá, R., Medina, J., and Salinas, J. (2011). Integration of low temperature and light signaling during cold acclimation response in Arabidopsis. Proc. Natl. Acad. Sci. USA 108: 16475-16480.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 16475-16480
-
-
Catalá, R.1
Medina, J.2
Salinas, J.3
-
12
-
-
75649129700
-
Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis
-
Charron, J.B., He, H., Elling, A.A., and Deng, X.W. (2009). Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis. Plant Cell 21: 3732-3748.
-
(2009)
Plant Cell
, vol.21
, pp. 3732-3748
-
-
Charron, J.B.1
He, H.2
Elling, A.A.3
Deng, X.W.4
-
13
-
-
41949142720
-
Integration of light and abscisic acid signaling during seed germination and early seedling development
-
Chen, H., Zhang, J.Y., Neff, M.M., Hong, S.W., Zhang, H.Y., Deng, X.W., and Xiong, L.M. (2008a). Integration of light and abscisic acid signaling during seed germination and early seedling development. Proc. Natl. Acad. Sci. USA 105: 4495-4500.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 4495-4500
-
-
Chen, H.1
Zhang, J.Y.2
Neff, M.M.3
Hong, S.W.4
Zhang, H.Y.5
Deng, X.W.6
Xiong, L.M.7
-
14
-
-
38949147924
-
Firefly luciferase complementation imaging assay for protein-protein interactions in plants
-
Chen, H.M., Zou, Y., Shang, Y.L., Lin, H.Q., Wang, Y.J., Cai, R., Tang, X.Y., and Zhou, J.M. (2008b). Firefly luciferase complementation imaging assay for protein-protein interactions in plants. Plant Physiol. 146: 368-376.
-
(2008)
Plant Physiol
, vol.146
, pp. 368-376
-
-
Chen, H.M.1
Zou, Y.2
Shang, Y.L.3
Lin, H.Q.4
Wang, Y.J.5
Cai, R.6
Tang, X.Y.7
Zhou, J.M.8
-
15
-
-
10944267031
-
Light signal transduction in higher plants
-
Chen, M., Chory, J., and Fankhauser, C. (2004). Light signal transduction in higher plants. Annu. Rev. Genet. 38: 87-117.
-
(2004)
Annu. Rev. Genet
, vol.38
, pp. 87-117
-
-
Chen, M.1
Chory, J.2
Fankhauser, C.3
-
16
-
-
33750957510
-
Cryptochrome-1-dependent execution of programmed cell death induced by singlet oxygen in Arabidopsis thaliana
-
Danon, A., Coll, N.S., and Apel, K. (2006). Cryptochrome-1-dependent execution of programmed cell death induced by singlet oxygen in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 103: 17036-17041.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 17036-17041
-
-
Danon, A.1
Coll, N.S.2
Apel, K.3
-
17
-
-
38549167870
-
A molecular framework for light and gibberellin control of cell elongation
-
de Lucas, M., Davière, J.M., Rodríguez-Falcón, M., Pontin, M., Iglesias-Pedraz, J.M., Lorrain, S., Fankhauser, C., Blázquez, M.A., Titarenko, E., and Prat, S. (2008). A molecular framework for light and gibberellin control of cell elongation. Nature 451: 480-484.
-
(2008)
Nature
, vol.451
, pp. 480-484
-
-
de Lucas, M.1
Davière, J.M.2
Rodríguez-Falcón, M.3
Pontin, M.4
Iglesias-Pedraz, J.M.5
Lorrain, S.6
Fankhauser, C.7
Blázquez, M.A.8
Titarenko, E.9
Prat, S.10
-
18
-
-
38549142539
-
Coordinated regulation of Arabidopsis thaliana development by light and gibberellins
-
Feng, S.H., et al. (2008). Coordinated regulation of Arabidopsis thaliana development by light and gibberellins. Nature 451: 475-479.
-
(2008)
Nature
, vol.451
, pp. 475-479
-
-
Feng, S.H.1
-
19
-
-
33745593967
-
Imaging the production of singlet oxygen in vivo using a new fluorescent sensor, Singlet Oxygen Sensor Green
-
Flors, C., Fryer, M.J., Waring, J., Reeder, B., Bechtold, U., Mullineaux, P.M., Nonell, S., Wilson, M.T., and Baker, N.R. (2006). Imaging the production of singlet oxygen in vivo using a new fluorescent sensor, Singlet Oxygen Sensor Green. J. Exp. Bot. 57: 1725-1734.
-
(2006)
J. Exp. Bot
, vol.57
, pp. 1725-1734
-
-
Flors, C.1
Fryer, M.J.2
Waring, J.3
Reeder, B.4
Bechtold, U.5
Mullineaux, P.M.6
Nonell, S.7
Wilson, M.T.8
Baker, N.R.9
-
20
-
-
33750819157
-
Reactive oxygen species as signals that modulate plant stress responses and programmed cell death
-
Gechev, T.S., Van Breusegem, F., Stone, J.M., Denev, I., and Laloi, C. (2006). Reactive oxygen species as signals that modulate plant stress responses and programmed cell death. Bioessays 28: 1091-1101.
-
(2006)
Bioessays
, vol.28
, pp. 1091-1101
-
-
Gechev, T.S.1
van Breusegem, F.2
Stone, J.M.3
Denev, I.4
Laloi, C.5
-
21
-
-
0032570771
-
Regulation of flowering time by Arabidopsis photoreceptors
-
Guo, H., Yang, H., Mockler, T.C., and Lin, C. (1998). Regulation of flowering time by Arabidopsis photoreceptors. Science 279: 1360-1363.
-
(1998)
Science
, vol.279
, pp. 1360-1363
-
-
Guo, H.1
Yang, H.2
Mockler, T.C.3
Lin, C.4
-
22
-
-
0034665253
-
HY5 stability and activity in Arabidopsis is regulated by phosphorylation in its COP1 binding domain
-
Hardtke, C.S., Gohda, K., Osterlund, M.T., Oyama, T., Okada, K., and Deng, X.W. (2000). HY5 stability and activity in Arabidopsis is regulated by phosphorylation in its COP1 binding domain. EMBO J. 19: 4997-5006.
-
(2000)
EMBO J
, vol.19
, pp. 4997-5006
-
-
Hardtke, C.S.1
Gohda, K.2
Osterlund, M.T.3
Oyama, T.4
Okada, K.5
Deng, X.W.6
-
23
-
-
58149295514
-
Regulated proteolysis in light-related signaling pathways
-
Henriques, R., Jang, I.C., and Chua, N.H. (2009). Regulated proteolysis in light-related signaling pathways. Curr. Opin. Plant Biol. 12: 49-56.
-
(2009)
Curr. Opin. Plant Biol
, vol.12
, pp. 49-56
-
-
Henriques, R.1
Jang, I.C.2
Chua, N.H.3
-
24
-
-
51449101034
-
Identification of regulatory pathways controlling gene expression of stress-responsive mitochondrial proteins in Arabidopsis
-
Ho, L.H.M., Giraud, E., Uggalla, V., Lister, R., Clifton, R., Glen, A., Thirkettle-Watts, D., Van Aken, O., and Whelan, J. (2008). Identification of regulatory pathways controlling gene expression of stress-responsive mitochondrial proteins in Arabidopsis. Plant Physiol. 147: 1858-1873.
-
(2008)
Plant Physiol
, vol.147
, pp. 1858-1873
-
-
Ho, L.H.M.1
Giraud, E.2
Uggalla, V.3
Lister, R.4
Clifton, R.5
Glen, A.6
Thirkettle-Watts, D.7
van Aken, O.8
Whelan, J.9
-
25
-
-
0037093378
-
Two interacting bZIP proteins are direct targets of COP1-mediated control of lightdependent gene expression in Arabidopsis
-
Holm, M., Ma, L.G., Qu, L.J., and Deng, X.W. (2002). Two interacting bZIP proteins are direct targets of COP1-mediated control of lightdependent gene expression in Arabidopsis. Genes Dev. 16: 1247-1259.
-
(2002)
Genes Dev
, vol.16
, pp. 1247-1259
-
-
Holm, M.1
Ma, L.G.2
Qu, L.J.3
Deng, X.W.4
-
26
-
-
4644286644
-
Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis
-
Huq, E., Al-Sady, B., Hudson, M., Kim, C.H., Apel, K., and Quail, P.H. (2004). Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis. Science 305: 1937-1941.
-
(2004)
Science
, vol.305
, pp. 1937-1941
-
-
Huq, E.1
Al-Sady, B.2
Hudson, M.3
Kim, C.H.4
Apel, K.5
Quail, P.H.6
-
27
-
-
84874544118
-
Arabidopsis chromatin remodeling factor PICKLE interacts with transcription factor HY5 to regulate hypocotyl cell elongation
-
Jing, Y., Zhang, D., Wang, X., Tang, W., Wang, W., Huai, J., Xu, G., Chen, D., Li, Y., and Lin, R. (2013). Arabidopsis chromatin remodeling factor PICKLE interacts with transcription factor HY5 to regulate hypocotyl cell elongation. Plant Cell 25: 242-256.
-
(2013)
Plant Cell
, vol.25
, pp. 242-256
-
-
Jing, Y.1
Zhang, D.2
Wang, X.3
Tang, W.4
Wang, W.5
Huai, J.6
Xu, G.7
Chen, D.8
Li, Y.9
Lin, R.10
-
28
-
-
4043141372
-
An overview of the basic helix-loop-helix proteins
-
Jones, S. (2004). An overview of the basic helix-loop-helix proteins. Genome Biol. 5: 226.
-
(2004)
Genome Biol
, vol.5
, pp. 226
-
-
Jones, S.1
-
29
-
-
0142124082
-
Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction
-
Kim, J., Yi, H., Choi, G., Shin, B., Song, P.-S., and Choi, G. (2003). Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction. Plant Cell 15: 2399-2407.
-
(2003)
Plant Cell
, vol.15
, pp. 2399-2407
-
-
Kim, J.1
Yi, H.2
Choi, G.3
Shin, B.4
Song, P.-S.5
Choi, G.6
-
30
-
-
34447115720
-
Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance
-
Kleine, T., Kindgren, P., Benedict, C., Hendrickson, L., and Strand, Å. (2007). Genome-wide gene expression analysis reveals a critical role for CRYPTOCHROME1 in the response of Arabidopsis to high irradiance. Plant Physiol. 144: 1391-1406.
-
(2007)
Plant Physiol
, vol.144
, pp. 1391-1406
-
-
Kleine, T.1
Kindgren, P.2
Benedict, C.3
Hendrickson, L.4
Strand, A.5
-
31
-
-
0030925073
-
Assembly of a bZIPbHLH transcription activation complex: Formation of the yeast Cbf1-Met4-Met28 complex is regulated through Met28 stimulation of Cbf1 DNA binding
-
Kuras, L., Barbey, R., and Thomas, D. (1997). Assembly of a bZIPbHLH transcription activation complex: formation of the yeast Cbf1-Met4-Met28 complex is regulated through Met28 stimulation of Cbf1 DNA binding. EMBO J. 16: 2441-2451.
-
(1997)
EMBO J
, vol.16
, pp. 2441-2451
-
-
Kuras, L.1
Barbey, R.2
Thomas, D.3
-
32
-
-
33846331967
-
Cross-talk between singlet oxygen-and hydrogen peroxide-dependent signaling of stress responses in Arabidopsis thaliana
-
Laloi, C., Stachowiak, M., Pers-Kamczyc, E., Warzych, E., Murgia, I., and Apel, K. (2007). Cross-talk between singlet oxygen-and hydrogen peroxide-dependent signaling of stress responses in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 104: 672-677.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 672-677
-
-
Laloi, C.1
Stachowiak, M.2
Pers-Kamczyc, E.3
Warzych, E.4
Murgia, I.5
Apel, K.6
-
33
-
-
78049304632
-
Plant hormone signaling lightens up: Integrators of light and hormones
-
Lau, O.S., and Deng, X.W. (2010). Plant hormone signaling lightens up: Integrators of light and hormones. Curr. Opin. Plant Biol. 13: 571-577.
-
(2010)
Curr. Opin. Plant Biol
, vol.13
, pp. 571-577
-
-
Lau, O.S.1
Deng, X.W.2
-
34
-
-
34250780751
-
Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development
-
Lee, J., He, K., Stolc, V., Lee, H., Figueroa, P., Gao, Y., Tongprasit, W., Zhao, H.Y., Lee, I., and Deng, X.W. (2007). Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development. Plant Cell 19: 731-749.
-
(2007)
Plant Cell
, vol.19
, pp. 731-749
-
-
Lee, J.1
He, K.2
Stolc, V.3
Lee, H.4
Figueroa, P.5
Gao, Y.6
Tongprasit, W.7
Zhao, H.Y.8
Lee, I.9
Deng, X.W.10
-
35
-
-
57649111510
-
Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness
-
Leivar, P., Monte, E., Oka, Y., Liu, T., Carle, C., Castillon, A., Huq, E., and Quail, P.H. (2008). Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness. Curr. Biol. 18: 1815-1823.
-
(2008)
Curr. Biol
, vol.18
, pp. 1815-1823
-
-
Leivar, P.1
Monte, E.2
Oka, Y.3
Liu, T.4
Carle, C.5
Castillon, A.6
Huq, E.7
Quail, P.H.8
-
36
-
-
78650496948
-
PIFs: Pivotal components in a cellular signaling hub
-
Leivar, P., and Quail, P.H. (2011). PIFs: Pivotal components in a cellular signaling hub. Trends Plant Sci. 16: 19-28.
-
(2011)
Trends Plant Sci
, vol.16
, pp. 19-28
-
-
Leivar, P.1
Quail, P.H.2
-
37
-
-
78650883757
-
Arabidopsis transcription factor ELONGATED HYPOCOTYL5 plays a role in the feedback regulation of phytochrome A signaling
-
Li, J., Li, G., Gao, S., Martinez, C., He, G., Zhou, Z., Huang, X., Lee, J.-H., Zhang, H., Shen, Y., Wang, H., and Deng, X.W. (2010). Arabidopsis transcription factor ELONGATED HYPOCOTYL5 plays a role in the feedback regulation of phytochrome A signaling. Plant Cell 22: 3634-3649.
-
(2010)
Plant Cell
, vol.22
, pp. 3634-3649
-
-
Li, J.1
Li, G.2
Gao, S.3
Martinez, C.4
He, G.5
Zhou, Z.6
Huang, X.7
Lee, J.-H.8
Zhang, H.9
Shen, Y.10
Wang, H.11
Deng, X.W.12
-
38
-
-
67651033747
-
Sensing and responding to excess light
-
Li, Z., Wakao, S., Fischer, B.B., and Niyogi, K.K. (2009). Sensing and responding to excess light. Annu. Rev. Plant Biol. 60: 239-260.
-
(2009)
Annu. Rev. Plant Biol
, vol.60
, pp. 239-260
-
-
Li, Z.1
Wakao, S.2
Fischer, B.B.3
Niyogi, K.K.4
-
39
-
-
36448967092
-
Transposase-derived transcription factors regulate light signaling in Arabidopsis
-
Lin, R., Ding, L., Casola, C., Ripoll, D.R., Feschotte, C., and Wang, H.Y. (2007). Transposase-derived transcription factors regulate light signaling in Arabidopsis. Science 318: 1302-1305.
-
(2007)
Science
, vol.318
, pp. 1302-1305
-
-
Lin, R.1
Ding, L.2
Casola, C.3
Ripoll, D.R.4
Feschotte, C.5
Wang, H.Y.6
-
40
-
-
0041029474
-
Direct targeting of light signals to a promoter element-bound transcription factor
-
Martínez-García, J.F., Huq, E., and Quail, P.H. (2000). Direct targeting of light signals to a promoter element-bound transcription factor. Science 288: 859-863.
-
(2000)
Science
, vol.288
, pp. 859-863
-
-
Martínez-García, J.F.1
Huq, E.2
Quail, P.H.3
-
41
-
-
0028410547
-
Genetic and molecular analysis of an allelic series of cop1 mutants suggests functional roles for the multiple protein domains
-
McNellis, T.W., von Arnim, A.G., Araki, T., Komeda, Y., Miséra, S., and Deng, X.W. (1994). Genetic and molecular analysis of an allelic series of cop1 mutants suggests functional roles for the multiple protein domains. Plant Cell 6: 487-500.
-
(1994)
Plant Cell
, vol.6
, pp. 487-500
-
-
McNellis, T.W.1
von Arnim, A.G.2
Araki, T.3
Komeda, Y.4
Miséra, S.5
Deng, X.W.6
-
42
-
-
45249084300
-
Reactive oxygen signaling and abiotic stress
-
Miller, G., Shulaev, V., and Mittler, R. (2008). Reactive oxygen signaling and abiotic stress. Physiol. Plant. 133: 481-489.
-
(2008)
Physiol. Plant
, vol.133
, pp. 481-489
-
-
Miller, G.1
Shulaev, V.2
Mittler, R.3
-
43
-
-
4644304481
-
Reactive oxygen gene network of plants
-
Mittler, R., Vanderauwera, S., Gollery, M., and Van Breusegem, F. (2004). Reactive oxygen gene network of plants. Trends Plant Sci. 9: 490-498.
-
(2004)
Trends Plant Sci
, vol.9
, pp. 490-498
-
-
Mittler, R.1
Vanderauwera, S.2
Gollery, M.3
van Breusegem, F.4
-
44
-
-
79958042568
-
ROS signaling: The new wave?
-
Mittler, R., Vanderauwera, S., Suzuki, N., Miller, G., Tognetti, V.B., Vandepoele, K., Gollery, M., Shulaev, V., and Van Breusegem, F. (2011). ROS signaling: The new wave? Trends Plant Sci. 16: 300-309.
-
(2011)
Trends Plant Sci
, vol.16
, pp. 300-309
-
-
Mittler, R.1
Vanderauwera, S.2
Suzuki, N.3
Miller, G.4
Tognetti, V.B.5
Vandepoele, K.6
Gollery, M.7
Shulaev, V.8
van Breusegem, F.9
-
45
-
-
0033049780
-
Antagonistic actions of Arabidopsis cryptochromes and phytochrome B in the regulation of floral induction
-
Mockler, T.C., Guo, H., Yang, H., Duong, H., and Lin, C. (1999). Antagonistic actions of Arabidopsis cryptochromes and phytochrome B in the regulation of floral induction. Development 126: 2073-2082.
-
(1999)
Development
, vol.126
, pp. 2073-2082
-
-
Mockler, T.C.1
Guo, H.2
Yang, H.3
Duong, H.4
Lin, C.5
-
46
-
-
9244261581
-
The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development
-
Monte, E., Tepperman, J.M., Al-Sady, B., Kaczorowski, K.A., Alonso, J.M., Ecker, J.R., Li, X., Zhang, Y.L., and Quail, P.H. (2004). The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development. Proc. Natl. Acad. Sci. USA 101: 16091-16098.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 16091-16098
-
-
Monte, E.1
Tepperman, J.M.2
Al-Sady, B.3
Kaczorowski, K.A.4
Alonso, J.M.5
Ecker, J.R.6
Li, X.7
Zhang, Y.L.8
Quail, P.H.9
-
47
-
-
48249094269
-
PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis
-
Moon, J., Zhu, L., Shen, H., and Huq, E. (2008). PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis. Proc. Natl. Acad. Sci. USA 105: 9433-9438.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 9433-9438
-
-
Moon, J.1
Zhu, L.2
Shen, H.3
Huq, E.4
-
48
-
-
64749089220
-
Genome-wide analysis of genes targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during seed germination in Arabidopsis
-
Oh, E., Kang, H., Yamaguchi, S., Park, J., Lee, D., Kamiya, Y., and Choi, G. (2009). Genome-wide analysis of genes targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during seed germination in Arabidopsis. Plant Cell 21: 403-419.
-
(2009)
Plant Cell
, vol.21
, pp. 403-419
-
-
Oh, E.1
Kang, H.2
Yamaguchi, S.3
Park, J.4
Lee, D.5
Kamiya, Y.6
Choi, G.7
-
49
-
-
10744230800
-
Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis
-
Op den Camp, R.G.L., Przybyla, D., Ochsenbein, C., Laloi, C., Kim, C.H., Danon, A., Wagner, D., Hideg, E., Göbel, C., Feussner, I., Nater, M., and Apel, K. (2003). Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis. Plant Cell 15: 2320-2332.
-
(2003)
Plant Cell
, vol.15
, pp. 2320-2332
-
-
Op den Camp, R.G.L.1
Przybyla, D.2
Ochsenbein, C.3
Laloi, C.4
Kim, C.H.5
Danon, A.6
Wagner, D.7
Hideg, E.8
Göbel, C.9
Feussner, I.10
Nater, M.11
Apel, K.12
-
50
-
-
0034713297
-
Targeted destabilization of HY5 during light-regulated development of Arabidopsis
-
Osterlund, M.T., Hardtke, C.S., Wei, N., and Deng, X.W. (2000). Targeted destabilization of HY5 during light-regulated development of Arabidopsis. Nature 405: 462-466.
-
(2000)
Nature
, vol.405
, pp. 462-466
-
-
Osterlund, M.T.1
Hardtke, C.S.2
Wei, N.3
Deng, X.W.4
-
51
-
-
0030718602
-
The Arabidopsis HY5 gene encodes a bZIP protein that regulates stimulus-induced development of root and hypocotyl
-
Oyama, T., Shimura, Y., and Okada, K. (1997). The Arabidopsis HY5 gene encodes a bZIP protein that regulates stimulus-induced development of root and hypocotyl. Genes Dev. 11: 2983-2995.
-
(1997)
Genes Dev
, vol.11
, pp. 2983-2995
-
-
Oyama, T.1
Shimura, Y.2
Okada, K.3
-
52
-
-
0036484368
-
Phytochrome photosensory signalling networks
-
Quail, P.H. (2002). Phytochrome photosensory signalling networks. Nat. Rev. Mol. Cell Biol. 3: 85-93.
-
(2002)
Nat. Rev. Mol. Cell Biol
, vol.3
, pp. 85-93
-
-
Quail, P.H.1
-
53
-
-
0027949428
-
Phytochrome A and phytochrome B have overlapping but distinct functions in Arabidopsis development
-
Reed, J.W., Nagatani, A., Elich, T.D., Fagan, M., and Chory, J. (1994). Phytochrome A and phytochrome B have overlapping but distinct functions in Arabidopsis development. Plant Physiol. 104: 1139-1149.
-
(1994)
Plant Physiol
, vol.104
, pp. 1139-1149
-
-
Reed, J.W.1
Nagatani, A.2
Elich, T.D.3
Fagan, M.4
Chory, J.5
-
54
-
-
0027548252
-
Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development
-
Reed, J.W., Nagpal, P., Poole, D.S., Furuya, M., and Chory, J. (1993). Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development. Plant Cell 5: 147-157.
-
(1993)
Plant Cell
, vol.5
, pp. 147-157
-
-
Reed, J.W.1
Nagpal, P.2
Poole, D.S.3
Furuya, M.4
Chory, J.5
-
55
-
-
0030572675
-
Evolution of chlorophyll biosynthesis-The challenge to survive photooxidation
-
Reinbothe, S., Reinbothe, C., Apel, K., and Lebedev, N. (1996). Evolution of chlorophyll biosynthesis-The challenge to survive photooxidation. Cell 86: 703-705.
-
(1996)
Cell
, vol.86
, pp. 703-705
-
-
Reinbothe, S.1
Reinbothe, C.2
Apel, K.3
Lebedev, N.4
-
56
-
-
33644878135
-
PIF1 is regulated by light-mediated degradation through the ubiquitin-26S proteasome pathway to optimize photomorphogenesis of seedlings in Arabidopsis
-
Shen, H., Moon, J., and Huq, E. (2005). PIF1 is regulated by light-mediated degradation through the ubiquitin-26S proteasome pathway to optimize photomorphogenesis of seedlings in Arabidopsis. Plant J. 44: 1023-1035.
-
(2005)
Plant J
, vol.44
, pp. 1023-1035
-
-
Shen, H.1
Moon, J.2
Huq, E.3
-
57
-
-
57649111948
-
Light-induced phosphorylation and degradation of the negative regulator PHYTOCHROME-INTERACTING FACTOR1 from Arabidopsis depend upon its direct physical interactions with photoactivated phytochromes
-
Shen, H., Zhu, L., Castillon, A., Majee, M., Downie, B., and Huq, E. (2008). Light-induced phosphorylation and degradation of the negative regulator PHYTOCHROME-INTERACTING FACTOR1 from Arabidopsis depend upon its direct physical interactions with photoactivated phytochromes. Plant Cell 20: 1586-1602.
-
(2008)
Plant Cell
, vol.20
, pp. 1586-1602
-
-
Shen, H.1
Zhu, L.2
Castillon, A.3
Majee, M.4
Downie, B.5
Huq, E.6
-
58
-
-
66149118628
-
Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors
-
Shin, J., Kim, K., Kang, H., Zulfugarov, I.S., Bae, G., Lee, C.H., Lee, D., and Choi, G. (2009). Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors. Proc. Natl. Acad. Sci. USA 106: 7660-7665.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 7660-7665
-
-
Shin, J.1
Kim, K.2
Kang, H.3
Zulfugarov, I.S.4
Bae, G.5
Lee, C.H.6
Lee, D.7
Choi, G.8
-
59
-
-
33847345588
-
PIF3 regulates anthocyanin biosynthesis in an HY5-dependent manner with both factors directly binding anthocyanin biosynthetic gene promoters in Arabidopsis
-
Shin, J., Park, E., and Choi, G. (2007). PIF3 regulates anthocyanin biosynthesis in an HY5-dependent manner with both factors directly binding anthocyanin biosynthetic gene promoters in Arabidopsis. Plant J. 49: 981-994.
-
(2007)
Plant J
, vol.49
, pp. 981-994
-
-
Shin, J.1
Park, E.2
Choi, G.3
-
60
-
-
0035165481
-
Plant bZIP G-box binding factors. Modular structure and activation mechanisms
-
Sibéril, Y., Doireau, P., and Gantet, P. (2001). Plant bZIP G-box binding factors. Modular structure and activation mechanisms. Eur. J. Biochem. 268: 5655-5666.
-
(2001)
Eur. J. Biochem
, vol.268
, pp. 5655-5666
-
-
Sibéril, Y.1
Doireau, P.2
Gantet, P.3
-
61
-
-
66149085783
-
PIF3 is a repressor of chloroplast development
-
Stephenson, P.G., Fankhauser, C., and Terry, M.J. (2009). PIF3 is a repressor of chloroplast development. Proc. Natl. Acad. Sci. USA 106: 7654-7659.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 7654-7659
-
-
Stephenson, P.G.1
Fankhauser, C.2
Terry, M.J.3
-
62
-
-
84863095991
-
Transposase-derived proteins FHY3/FAR1 interact with PHYTOCHROME-INTERACTING FACTOR1 to regulate chlorophyll biosynthesis by modulating HEMB1 during deetiolation in Arabidopsis
-
Tang, W., Wang, W., Chen, D., Ji, Q., Jing, Y., Wang, H., and Lin, R. (2012). Transposase-derived proteins FHY3/FAR1 interact with PHYTOCHROME-INTERACTING FACTOR1 to regulate chlorophyll biosynthesis by modulating HEMB1 during deetiolation in Arabidopsis. Plant Cell 24: 1984-2000.
-
(2012)
Plant Cell
, vol.24
, pp. 1984-2000
-
-
Tang, W.1
Wang, W.2
Chen, D.3
Ji, Q.4
Jing, Y.5
Wang, H.6
Lin, R.7
-
63
-
-
0028181717
-
Isolated photosynthetic reaction center of photosystem II as a sensitizer for the formation of singlet oxygen. Detection and quantum yield determination using a chemical trapping technique
-
Telfer, A., Bishop, S.M., Phillips, D., and Barber, J. (1994). Isolated photosynthetic reaction center of photosystem II as a sensitizer for the formation of singlet oxygen. Detection and quantum yield determination using a chemical trapping technique. J. Biol. Chem. 269: 13244-13253.
-
(1994)
J. Biol. Chem
, vol.269
, pp. 13244-13253
-
-
Telfer, A.1
Bishop, S.M.2
Phillips, D.3
Barber, J.4
-
64
-
-
0036516002
-
bZIP transcription factors in Arabidopsis
-
The bZIP Research Group (2002). bZIP transcription factors in Arabidopsis. Trends Plant Sci. 7: 106-111.
-
(2002)
Trends Plant Sci
, vol.7
, pp. 106-111
-
-
The bZIP Research Group1
-
65
-
-
0042421751
-
The Arabidopsis basic/helix-loop-helix transcription factor family
-
Toledo-Ortiz, G., Huq, E., and Quail, P.H. (2003). The Arabidopsis basic/helix-loop-helix transcription factor family. Plant Cell 15: 1749-1770.
-
(2003)
Plant Cell
, vol.15
, pp. 1749-1770
-
-
Toledo-Ortiz, G.1
Huq, E.2
Quail, P.H.3
-
66
-
-
63649146772
-
Singlet oxygen in plants: Production, detoxification and signaling
-
Triantaphylidès, C., and Havaux, M. (2009). Singlet oxygen in plants: Production, detoxification and signaling. Trends Plant Sci. 14: 219-228.
-
(2009)
Trends Plant Sci
, vol.14
, pp. 219-228
-
-
Triantaphylidès, C.1
Havaux, M.2
-
67
-
-
0842299514
-
Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis
-
Ulm, R., Baumann, A., Oravecz, A., Máté, Z., Adám, E., Oakeley, E.J., Schäfer, E., and Nagy, F. (2004). Genome-wide analysis of gene expression reveals function of the bZIP transcription factor HY5 in the UV-B response of Arabidopsis. Proc. Natl. Acad. Sci. USA 101: 1397-1402.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 1397-1402
-
-
Ulm, R.1
Baumann, A.2
Oravecz, A.3
Máté, Z.4
Adám, E.5
Oakeley, E.J.6
Schäfer, E.7
Nagy, F.8
-
68
-
-
8444221224
-
The genetic basis of singlet oxygen-induced stress responses of Arabidopsis thaliana
-
Wagner, D., Przybyla, D., Op den Camp, R., Kim, C., Landgraf, F., Lee, K.P., Würsch, M., Laloi, C., Nater, M., Hideg, E., and Apel, K. (2004). The genetic basis of singlet oxygen-induced stress responses of Arabidopsis thaliana. Science 306: 1183-1185.
-
(2004)
Science
, vol.306
, pp. 1183-1185
-
-
Wagner, D.1
Przybyla, D.2
Op den Camp, R.3
Kim, C.4
Landgraf, F.5
Lee, K.P.6
Würsch, M.7
Laloi, C.8
Nater, M.9
Hideg, E.10
Apel, K.11
-
69
-
-
7044229949
-
Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation
-
Walter, M., Chaban, C., Schütze, K., Batistic, O., Weckermann, K., Näke, C., Blazevic, D., Grefen, C., Schumacher, K., Oecking, C., Harter, K., and Kudla, J. (2004). Visualization of protein interactions in living plant cells using bimolecular fluorescence complementation. Plant J. 40: 428-438.
-
(2004)
Plant J
, vol.40
, pp. 428-438
-
-
Walter, M.1
Chaban, C.2
Schütze, K.3
Batistic, O.4
Weckermann, K.5
Näke, C.6
Blazevic, D.7
Grefen, C.8
Schumacher, K.9
Oecking, C.10
Harter, K.11
Kudla, J.12
-
70
-
-
0030296152
-
The role of the COP/DET/FUS genes in light control of Arabidopsis seedling development
-
Wei, N., and Deng, X.W. (1996). The role of the COP/DET/FUS genes in light control of Arabidopsis seedling development. Plant Physiol. 112: 871-878.
-
(1996)
Plant Physiol
, vol.112
, pp. 871-878
-
-
Wei, N.1
Deng, X.W.2
-
71
-
-
34548666385
-
The Arabidopsis BAP1 and BAP2 genes are general inhibitors of programmed cell death
-
Yang, H., Yang, S., Li, Y., and Hua, J. (2007). The Arabidopsis BAP1 and BAP2 genes are general inhibitors of programmed cell death. Plant Physiol. 145: 135-146.
-
(2007)
Plant Physiol
, vol.145
, pp. 135-146
-
-
Yang, H.1
Yang, S.2
Li, Y.3
Hua, J.4
-
72
-
-
27744474619
-
COP1-From plant photomorphogenesis to mammalian tumorigenesis
-
Yi, C., and Deng, X.W. (2005). COP1-From plant photomorphogenesis to mammalian tumorigenesis. Trends Cell Biol. 15: 618-625.
-
(2005)
Trends Cell Biol
, vol.15
, pp. 618-625
-
-
Yi, C.1
Deng, X.W.2
-
73
-
-
79251572672
-
Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulation
-
Zhang, H.Y., He, H., Wang, X.C., Wang, X.F., Yang, X.Z., Li, L., and Deng, X.W. (2011). Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulation. Plant J. 65: 346-358.
-
(2011)
Plant J
, vol.65
, pp. 346-358
-
-
Zhang, H.Y.1
He, H.2
Wang, X.C.3
Wang, X.F.4
Yang, X.Z.5
Li, L.6
Deng, X.W.7
-
74
-
-
75849131641
-
EIN3/EIL1 cooperate with PIF1 to prevent photooxidation and to promote greening of Arabidopsis seedlings
-
Zhong, S.W., Zhao, M.T., Shi, T.Y., Shi, H., An, F.Y., Zhao, Q., and Guo, H.W. (2009). EIN3/EIL1 cooperate with PIF1 to prevent photooxidation and to promote greening of Arabidopsis seedlings. Proc. Natl. Acad. Sci. USA 106: 21431-21436.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 21431-21436
-
-
Zhong, S.W.1
Zhao, M.T.2
Shi, T.Y.3
Shi, H.4
An, F.Y.5
Zhao, Q.6
Guo, H.W.7
|