LOcating Non-Unique matched Tags (LONUT) to Improve the Detection of the Enriched Regions for ChIP-seq Data

PLoS ONE

Volumn 8, Issue 6, 2013, Pages

  Wang, Rui ^a,b   Hsu, Hang Kai ^c   Blattler, Adam ^d,e   Wang, Yisong ^b   Lan, Xun ^b   Wang, Yao ^b   Hsu, Pei Yin ^c   Leu, Yu Wei ^f   Huang, Tim H M ^c   Farnham, Peggy J ^d   Jin, Victor X ^b  

^a LANZHOU UNIVERSITY   (China)

^b OHIO STATE UNIVERSITY   (United States)

^c University of Texas Health Science Center   (United States)

^d UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f NATIONAL CHUNG CHENG UNIVERSITY   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

ESTROGEN RECEPTOR; RNA POLYMERASE II; SCAFFOLD PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR 7 LIKE 2; TRANSCRIPTION FACTOR NRSF; TRANSCRIPTION FACTOR YY1; UNCLASSIFIED DRUG;

ACCURACY; ALGORITHM; ARTICLE; BINDING SITE; CALCULATION; CONTROLLED STUDY; DNA METHYLATION; GENOME; HISTONE MODIFICATION; HUMAN; HUMAN CELL; INTERMETHOD COMPARISON; LOCATING NON UNIQUE MATCHED TAG; POLYMERASE CHAIN REACTION; SCORING SYSTEM; UNIQUELY MATCHED TAG;

ALGORITHMS; BASE SEQUENCE; CHROMATIN IMMUNOPRECIPITATION; HUMANS; K562 CELLS; LINEAR MODELS; MCF-7 CELLS; SEQUENCE ANALYSIS; STATISTICS AS TOPIC;

EID: 84879382729     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0067788     Document Type: Article

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