-
1
-
-
0029146556
-
SLU7 and a novel activity, SSF1, act during the PRP16-dependent step of yeast pre-mRNA splicing
-
Ansari A, Schwer B. 1995. SLU7 and a novel activity, SSF1, act during the PRP16-dependent step of yeast pre-mRNA splicing. EMBO J 14: 4001-4009.
-
(1995)
EMBO J
, vol.14
, pp. 4001-4009
-
-
Ansari, A.1
Schwer, B.2
-
2
-
-
0030671163
-
Prp43: An RNA helicase-like factor involved in spliceosome disassembly
-
Arenas JE, Abelson JN. 1997. Prp43: An RNA helicase-like factor involved in spliceosome disassembly. Proc Natl Acad Sci 94: 11798-11802.
-
(1997)
Proc Natl Acad Sci
, vol.94
, pp. 11798-11802
-
-
Arenas, J.E.1
Abelson, J.N.2
-
3
-
-
0023664137
-
Purification of a RNA debranching activity from HeLa cells
-
Arenas J, Hurwitz J. 1987. Purification of a RNA debranching activity from HeLa cells. J Biol Chem 262: 4274-4279.
-
(1987)
J Biol Chem
, vol.262
, pp. 4274-4279
-
-
Arenas, J.1
Hurwitz, J.2
-
4
-
-
0036948420
-
Allosteric cascade of spliceosome activation
-
DOI 10.1146/annurev.genet.36.043002.091635
-
Brow DA. 2002. Allosteric cascade of spliceosome activation. Annu Rev Genet 36: 333-360. (Pubitemid 36109193)
-
(2002)
Annual Review of Genetics
, vol.36
, pp. 333-360
-
-
Brow, D.A.1
-
5
-
-
0001468848
-
Splicing of precursors to mRNAs by the spliceosome
-
(ed. Gesteland RF, et al.), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Burge CB, Tuschl TH, Sharp PA. 1999. Splicing of precursors to mRNAs by the spliceosome. In RNA world II (ed. Gesteland RF, et al.), pp. 525-560. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1999)
RNA World II
, pp. 525-560
-
-
Burge, C.B.1
Tuschl, T.H.2
Sharp, P.A.3
-
6
-
-
0025755924
-
Isolation and characterization of the gene encoding yeast debranching enzyme
-
Chapman KB, Boeke JD. 1991. Isolation and characterization of the gene encoding yeast debranching enzyme. Cell 65: 483-492. (Pubitemid 121002058)
-
(1991)
Cell
, vol.65
, Issue.3
, pp. 483-492
-
-
Chapman, K.B.1
Boeke, J.D.2
-
7
-
-
0031027138
-
2+coordinated to the pro-Rp oxygen of the scissile bond
-
2+coordinated to the pro-Rp oxygen of the scissile bond. Biochemistry 36: 2425-2438.
-
(1997)
Biochemistry
, vol.36
, pp. 2425-2438
-
-
Chen, Y.1
Li, X.2
Gegenheimer, P.3
-
8
-
-
84873041707
-
Link of NTR-mediated spliceosome disassembly with DEAH-box ATPases Prp2, Prp16 and Prp22
-
Chen H-C, Tseng C-K, Tsai R-T, Chung C-S, Cheng S-C. 2013. Link of NTR-mediated spliceosome disassembly with DEAH-box ATPases Prp2, Prp16 and Prp22. Mol Cell Biol 33: 514-525.
-
(2013)
Mol Cell Biol
, vol.33
, pp. 514-525
-
-
Chen, H.-C.1
Tseng, C.-K.2
Tsai, R.-T.3
Chung, C.-S.4
Cheng, S.-C.5
-
9
-
-
70350532246
-
Cwc25 is a novel splicing factor required after Prp2 and Yju2 to facilitate the first catalytic reaction
-
Chiu Y-F, Liu Y-C, Chiang T-W, Yeh T-C, Tseng C-K, Wu NY, Cheng S-C. 2009. Cwc25 is a novel splicing factor required after Prp2 and Yju2 to facilitate the first catalytic reaction. Mol Cell Biol 29: 5671-5678.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 5671-5678
-
-
Chiu, Y.-F.1
Liu, Y.-C.2
Chiang, T.-W.3
Yeh, T.-C.4
Tseng, C.-K.5
Wu, N.Y.6
Cheng, S.-C.7
-
10
-
-
0026088747
-
Requirement of the RNA helicase-like protein PRP22 for release of messenger RNA from spliceosomes
-
Company M, Arenas J, Abelson J. 1991. Requirement of the RNA helicase-like protein PRP22 for release of messenger RNA from spliceosomes. Nature 349: 487-493. (Pubitemid 21912085)
-
(1991)
Nature
, vol.349
, Issue.6309
, pp. 487-493
-
-
Company, M.1
Arenas, J.2
Abelson, J.3
-
11
-
-
0029927857
-
Two competing pathways for self-splicing by group II introns: A quantitative analysis of in vitro reaction rates and products
-
DOI 10.1006/jmbi.1996.0066
-
Daniels DL, Michels WJ Jr, Pyle AM. 1996. Two competing pathways for self-splicing by group II introns: A quantitative analysis of in vitro reaction rates and products. J Mol Biol 256: 31-49. (Pubitemid 26104208)
-
(1996)
Journal of Molecular Biology
, vol.256
, Issue.1
, pp. 31-49
-
-
Daniels, D.L.1
Michels Jr., W.J.2
Pyle, A.M.3
-
12
-
-
0026440183
-
An essential splicing factor, SLU7, mediates 3′ splice site choice in yeast
-
Frank D, Guthrie C. 1992. An essential splicing factor, SLU7, mediates 3′ splice site choice in yeast. Genes Dev 6: 2112-2124.
-
(1992)
Genes Dev
, vol.6
, pp. 2112-2124
-
-
Frank, D.1
Guthrie, C.2
-
13
-
-
84861412668
-
Metalion rescue revisited: Biochemical detection of site-bound metal ions important for RNA folding
-
Frederiksen JK, Li N-S, Das R, Herschlag D, Piccirilli JA. 2012. Metalion rescue revisited: Biochemical detection of site-bound metal ions important for RNA folding. RNA 18: 1123-1141.
-
(2012)
RNA
, vol.18
, pp. 1123-1141
-
-
Frederiksen, J.K.1
Li, N.-S.2
Das, R.3
Herschlag, D.4
Piccirilli, J.A.5
-
14
-
-
0027404721
-
Stages in the second reaction of pre-mRNA splicing: The final step is ATP independent
-
Horowitz DS, Abelson J. 1993. Stages in the second reaction of pre-mRNA splicing: The final step is ATP independent. Genes Dev 7: 320-329. (Pubitemid 23084407)
-
(1993)
Genes and Development
, vol.7
, Issue.2
, pp. 320-329
-
-
Horowitz, D.S.1
Abelson, J.2
-
15
-
-
0023850025
-
Group II intron self-splicing. Alternative reaction conditions yield novel products
-
Jarrel KA, Peebles CL, Dierich RC, Romiti SL, Perlman PS. 1988. Group II intron self-splicing. Alternative reaction conditions yield novel products. J Biol Chem 263: 3432-3439. (Pubitemid 18072804)
-
(1988)
Journal of Biological Chemistry
, vol.263
, Issue.7
, pp. 3432-3439
-
-
Jarrell, K.A.1
Peebles, C.L.2
Dietrich, R.C.3
Romiti, S.L.4
Perlman, P.S.5
-
16
-
-
28544451829
-
Structure-function analysis of yeast RNA debranching enzyme (Dbr1), a manganese-dependent phosphodiesterase
-
DOI 10.1093/nar/gki934
-
Khalid MF, Damha MJ, Shuman S, Schwer B. 2005. Structure-function analysis of yeast RNA debranching enzyme (Dbr1), a manganese-dependent phosphodiesterase. Nucleic Acids Res 33: 6349-6360. (Pubitemid 41742572)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.19
, pp. 6349-6360
-
-
Khalid, M.F.1
Damha, M.J.2
Shuman, S.3
Schwer, B.4
-
17
-
-
0021995992
-
Characterization of the branch site in lariat RNAs produced by splicing of mRNA precursors
-
DOI 10.1038/313552a0
-
Konarska MM, Grabowski PJ, Padgett RA, Sharp PA. 1985. Characterization of the branch site in lariat RNAs produced by splicing of mRNA precursors. Nature 313: 552-557. (Pubitemid 15172416)
-
(1985)
Nature
, vol.313
, Issue.6003
, pp. 552-557
-
-
Konarska, M.M.1
Grabowski, P.J.2
Padgett, R.A.3
Sharp, P.A.4
-
18
-
-
77149180424
-
Release of SF3 from the intron branchpoint activates the first step of pre-mRNA splicing
-
Lardelli RM, Thompson JX, Yates JR III, Stevens SW. 2010. Release of SF3 from the intron branchpoint activates the first step of pre-mRNA splicing. RNA 16: 516-528.
-
(2010)
RNA
, vol.16
, pp. 516-528
-
-
Lardelli, R.M.1
Thompson, J.X.2
Yates III, J.R.3
Stevens, S.W.4
-
19
-
-
0022350602
-
Yeast mRNA splicing in vitro
-
Lin RJ, Newman AJ, Cheng SC, Abelson J. 1985. Yeast mRNA splicing in vitro. J Biol Chem 260: 14780-14792. (Pubitemid 16211015)
-
(1985)
Journal of Biological Chemistry
, vol.260
, Issue.27
, pp. 14780-14792
-
-
Lin, R.-J.1
Newman, A.J.2
Chen, S.-C.3
Abelson, J.4
-
20
-
-
84871880170
-
The interaction of Prp2 with a defined region of the intron is required for the first splicing reaction
-
Liu H-L, Cheng S-C. 2012. The interaction of Prp2 with a defined region of the intron is required for the first splicing reaction. Mol Cell Biol 32: 5056-5066.
-
(2012)
Mol Cell Biol
, vol.32
, pp. 5056-5066
-
-
Liu, H.-L.1
Cheng, S.-C.2
-
21
-
-
34249890532
-
Opposing classes of prp8 alleles modulate the transition between the catalytic steps of pre-mRNA splicing
-
DOI 10.1038/nsmb1240, PII NSMB1240
-
Liu L, Query CC, Konarska MM. 2007a. Opposing classes of prp8 alleles modulate the transition between the catalytic steps of pre-mRNA splicing. Nat Struct Mol Biol 14: 519-526. (Pubitemid 46871804)
-
(2007)
Nature Structural and Molecular Biology
, vol.14
, Issue.6
, pp. 519-526
-
-
Liu, L.1
Query, C.C.2
Konarska, M.M.3
-
22
-
-
34547155595
-
A novel splicing factor, Yju2, is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing
-
DOI 10.1128/MCB.00346-07
-
Liu Y-C, Chen H-C, Wu N-Y, Cheng S-C. 2007b. A novel splicing factor Yju2 is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing. Mol Cell Biol 27: 5403-5413. (Pubitemid 47124394)
-
(2007)
Molecular and Cellular Biology
, vol.27
, Issue.15
, pp. 5403-5413
-
-
Liu, Y.-C.1
Chen, H.-C.2
Wu, N.-Y.3
Cheng, S.-C.4
-
23
-
-
84868035651
-
Visualizing group II intron catalysis through the stages of splicing
-
Marcia M, Pyle AM. 2012. Visualizing group II intron catalysis through the stages of splicing. Cell 151: 497-507.
-
(2012)
Cell
, vol.151
, pp. 497-507
-
-
Marcia, M.1
Pyle, A.M.2
-
24
-
-
0037124096
-
Prp43 is an essential RNA-dependent ATPase required for release of lariat-intron from the spliceosome
-
DOI 10.1074/jbc.M200762200
-
Martin A, Schneider S, Schwer B. 2002. Prp43 is an essential RNA-dependent ATPase required for release of lariat-intron from the spliceosome. J Biol Chem 277: 17743-17750. (Pubitemid 34967580)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.20
, pp. 17743-17750
-
-
Martin, A.1
Schneider, S.2
Schwer, B.3
-
25
-
-
0029061712
-
Stereochemical selectivity of group II intron splicing reverse splicing, and hydrolysis reactions
-
Podar M, Perlman PS, Padgett RA. 1995. Stereochemical selectivity of group II intron splicing reverse splicing, and hydrolysis reactions. Mol Cell Biol 15: 4466-4478.
-
(1995)
Mol Cell Biol
, vol.15
, pp. 4466-4478
-
-
Podar, M.1
Perlman, P.S.2
Padgett, R.A.3
-
26
-
-
2342522014
-
Suppression of multiple substrate mutations by spliceosomal prp8 alleles suggests functional correlations with ribosomal ambiguity mutants
-
Query CC, Konarska MM. 2004. Suppression of multiple substrate mutations by spliceosomal prp8 alleles suggests functional correlations with ribosomal ambiguity mutants. Mol Cell 14: 343-353.
-
(2004)
Mol Cell
, vol.14
, pp. 343-353
-
-
Query, C.C.1
Konarska, M.M.2
-
27
-
-
0022424110
-
An RNA processing activity that debranches RNA lariats
-
Ruskin B, Green MR. 1985. An RNA processing activity that debranches RNA lariats. Science 229: 135-140.
-
(1985)
Science
, vol.229
, pp. 135-140
-
-
Ruskin, B.1
Green, M.R.2
-
28
-
-
0021719524
-
Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro
-
Ruskin B, Krainer AR, Maniatis T, Green MR. 1984. Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro. Cell 38: 317-331. (Pubitemid 15216559)
-
(1984)
Cell
, vol.38
, Issue.1
, pp. 317-331
-
-
Ruskin, B.1
Krainer, A.R.2
Maniatis, T.3
Green, M.R.4
-
29
-
-
0032055765
-
Prp22, a DExH-box RNA helicase, plays two distinct roles in yeast pre-mRNA splicing
-
DOI 10.1093/emboj/17.7.2086
-
Schwer B, Gross CH. 1998. Prp22, a DExH-box RNA helicase, plays two distinct roles in yeast pre-mRNA splicing. EMBO J 17: 2086-2094. (Pubitemid 28154537)
-
(1998)
EMBO Journal
, vol.17
, Issue.7
, pp. 2086-2094
-
-
Schwer, B.1
Gross, C.H.2
-
30
-
-
0033607225
-
Three metal ions at the active site of the Tetrahymena group I ribozyme
-
DOI 10.1073/pnas.96.22.12299
-
Shan SO, Yoshida A, Sun SG, Piccirilli JA, Herschlag D. 1999. Three metal ions at the active site of the Tetrahymena group I ribozyme. Proc Natl Acad Sci 96: 12299-12304. (Pubitemid 29513496)
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.22
, pp. 12299-12304
-
-
Shan, S.-O.1
Yoshida, A.2
Sun, S.3
Piccirilli, J.A.4
Herschlag, D.5
-
31
-
-
0030833215
-
Metal ion catalysis during splicing of premessenger rna
-
DOI 10.1038/42068
-
Sontheimer EJ, Sun S, Piccirilli JA. 1997. Metal ion catalysis during splicing of premessenger RNA. Nature 388: 801-805. (Pubitemid 27375162)
-
(1997)
Nature
, vol.388
, Issue.6644
, pp. 801-805
-
-
Sontheimer, E.J.1
Sun, S.2
Piccirilli, J.A.3
-
32
-
-
0032489021
-
Mechanical devices of the spliceosome: Motors, clocks, springs, and things
-
DOI 10.1016/S0092-8674(00)80925-3
-
Staley JP, Guthrie C. 1998. Mechanical devices of the spliceosome: Motors, clocks, springs, and things. Cell 92: 315-326. (Pubitemid 28093010)
-
(1998)
Cell
, vol.92
, Issue.3
, pp. 315-326
-
-
Staley, J.P.1
Guthrie, C.2
-
33
-
-
46449086933
-
Both catalytic steps of nuclear pre-mRNA splicing are reversible
-
DOI 10.1126/science.1158993
-
Tseng C-K, Cheng S-C. 2008. Both catalytic steps of nuclear pre-mRNA splicing are reversible. Science 320: 1782-1784. (Pubitemid 351931293)
-
(2008)
Science
, vol.320
, Issue.5884
, pp. 1782-1784
-
-
Tseng, C.-K.1
Cheng, S.-C.2
-
34
-
-
78650446117
-
DEAH-box ATPase Prp16 has dual roles in remodeling of the spliceosome in catalytic steps
-
Tseng C-K, Liu H-L, Cheng S-C. 2011. DEAH-box ATPase Prp16 has dual roles in remodeling of the spliceosome in catalytic steps. RNA 17: 145-154.
-
(2011)
RNA
, vol.17
, pp. 145-154
-
-
Tseng, C.-K.1
Liu, H.-L.2
Cheng, S.-C.3
-
35
-
-
0032525149
-
The DEAH-box protein PRP22 is an ATPase that mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes
-
Wagner JDO, Jankowsky E, Company M, Pyle AM, Abelson JN. 1998. The DEAH-box protein PRP22 is an ATPase that mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes. EMBO J 17: 2926-2937.
-
(1998)
EMBO J
, vol.17
, pp. 2926-2937
-
-
Wagner, J.D.O.1
Jankowsky, E.2
Company, M.3
Pyle, A.M.4
Abelson, J.N.5
-
36
-
-
60349104299
-
The spliceosome: Design principles of a dynamic RNP machine
-
Wahl MC, Will CL, Lührmann RL. 2009. The spliceosome: Design principles of a dynamic RNP machine. Cell 136: 701-718.
-
(2009)
Cell
, vol.136
, pp. 701-718
-
-
Wahl, M.C.1
Will, C.L.2
Lührmann, R.L.3
-
37
-
-
71449119694
-
Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components
-
Warkocki Z, Odenwälder P, Schmitzová J, Platzmann F, Stark H, Urlaub H, Ficner R, Fabrizio P, Lührmann R. 2009. Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components. Nat Struct Mol Biol 16: 1237-1243.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 1237-1243
-
-
Warkocki, Z.1
Odenwälder, P.2
Schmitzová, J.3
Platzmann, F.4
Stark, H.5
Urlaub, H.6
Ficner, R.7
Fabrizio, P.8
Lührmann, R.9
-
38
-
-
33645213731
-
Spliceosome structure and function
-
(ed. Gesteland RF, et al.), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Will CL, Lührmann R. 2006. Spliceosome structure and function. In The RNA world (ed. Gesteland RF, et al.), pp. 369-400. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(2006)
The RNA World
, pp. 369-400
-
-
Will, C.L.1
Lührmann, R.2
|