메뉴 건너뛰기




Volumn 110, Issue 24, 2013, Pages 9950-9955

Circadian patterns of gene expression in the human brain and disruption in major depressive disorder

Author keywords

Circadian rhythms; Depression; Microarray

Indexed keywords

NUCLEAR RECEPTOR NR1D1; PER1 PROTEIN; PER2 PROTEIN; PROTEIN BMAL1; TRANSCRIPTION FACTOR CLOCK; TRANSCRIPTOME; TRANSFERRIN RECEPTOR;

EID: 84879002303     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1305814110     Document Type: Article
Times cited : (448)

References (41)
  • 1
    • 4344624686 scopus 로고    scopus 로고
    • The behavioral ecology and evolution of biological timing systems
    • eds Dunlap JC, Loros JJ, Decoursey PJ (Sinauer, Sunderland, MA)
    • DeCoursey PJ (2004) The behavioral ecology and evolution of biological timing systems. Chronobiology: Biological Timekeeping, eds Dunlap JC, Loros JJ, Decoursey PJ (Sinauer, Sunderland, MA), pp 26-65.
    • (2004) Chronobiology: Biological Timekeeping , pp. 26-65
    • DeCoursey, P.J.1
  • 5
    • 55449106027 scopus 로고    scopus 로고
    • Analysis of gene regulatory networks in the mammalian circadian rhythm
    • Yan J, Wang H, Liu Y, Shao C (2008) Analysis of gene regulatory networks in the mammalian circadian rhythm. PLOS Comput Biol 4(10):e1000193.
    • (2008) PLOS Comput Biol , vol.4 , Issue.10
    • Yan, J.1    Wang, H.2    Liu, Y.3    Shao, C.4
  • 6
    • 46449094077 scopus 로고    scopus 로고
    • Genome-wide expression profiling and bioinformatics analysis of diurnally regulated genes in the mouse prefrontal cortex
    • Yang S, Wang K, Valladares O, Hannenhalli S, Bucan M (2007) Genome-wide expression profiling and bioinformatics analysis of diurnally regulated genes in the mouse prefrontal cortex. Genome Biol 8(11):R247.
    • (2007) Genome Biol , vol.8 , Issue.11
    • Yang, S.1    Wang, K.2    Valladares, O.3    Hannenhalli, S.4    Bucan, M.5
  • 7
    • 84855228995 scopus 로고    scopus 로고
    • Regulation of metabolism: The circadian clock dictates the time
    • Sahar S, Sassone-Corsi P (2012) Regulation of metabolism: The circadian clock dictates the time. Trends Endocrinol Metab 23(1):1-8.
    • (2012) Trends Endocrinol Metab , vol.23 , Issue.1 , pp. 1-8
    • Sahar, S.1    Sassone-Corsi, P.2
  • 8
    • 52149109334 scopus 로고    scopus 로고
    • The genetics of mammalian circadian order and disorder: Implications for physiology and disease
    • Takahashi JS, Hong HK, Ko CH, McDearmon EL (2008) The genetics of mammalian circadian order and disorder: Implications for physiology and disease. Nat Rev Genet 9(10):764-775.
    • (2008) Nat Rev Genet , vol.9 , Issue.10 , pp. 764-775
    • Takahashi, J.S.1    Hong, H.K.2    Ko, C.H.3    McDearmon, E.L.4
  • 9
    • 80054096382 scopus 로고    scopus 로고
    • Circadian rhythms and depression: Human psychopathology and animal models
    • Kronfeld-Schor N, Einat H (2012) Circadian rhythms and depression: Human psychopathology and animal models. Neuropharmacology 62(1):101-114.
    • (2012) Neuropharmacology , vol.62 , Issue.1 , pp. 101-114
    • Kronfeld-Schor, N.1    Einat, H.2
  • 10
    • 0017160004 scopus 로고
    • REM latency: A psychobiologic marker for primary depressive disease
    • Kupfer DJ (1976) REM latency: A psychobiologic marker for primary depressive disease. Biol Psychiatry 11(2):159-174.
    • (1976) Biol Psychiatry , vol.11 , Issue.2 , pp. 159-174
    • Kupfer, D.J.1
  • 11
    • 0025937460 scopus 로고
    • Sleep electroencephalography in depressive illness. A collaborative study by the World Health Organization
    • Mendlewicz J, Kerkhofs M (1991) Sleep electroencephalography in depressive illness. A collaborative study by the World Health Organization. Br J Psychiatry 159:505-509.
    • (1991) Br J Psychiatry , vol.159 , pp. 505-509
    • Mendlewicz, J.1    Kerkhofs, M.2
  • 12
    • 0141740480 scopus 로고    scopus 로고
    • Sleep and manipulations of the sleep-wake rhythm in depression
    • Berger M, van Calker D, Riemann D (2003) Sleep and manipulations of the sleep-wake rhythm in depression. Acta Psychiatr Scand Suppl 418:83-91.
    • (2003) Acta Psychiatr Scand Suppl , vol.418 , pp. 83-91
    • Berger, M.1    Van Calker, D.2    Riemann, D.3
  • 13
    • 84861070414 scopus 로고    scopus 로고
    • Rapid-acting antidepressant strategies: Mechanisms of action
    • Bunney BG, Bunney WE (2012) Rapid-acting antidepressant strategies: Mechanisms of action. Int J Neuropsychopharmacol 15(5):695-713.
    • (2012) Int J Neuropsychopharmacol , vol.15 , Issue.5 , pp. 695-713
    • Bunney, B.G.1    Bunney, W.E.2
  • 14
    • 78049331321 scopus 로고    scopus 로고
    • Circadian expression of clock- and tumor suppressor genes in human oral mucosa
    • Zieker D, et al. (2010) Circadian expression of clock- and tumor suppressor genes in human oral mucosa. Cell Physiol Biochem 26(2):155-166.
    • (2010) Cell Physiol Biochem , vol.26 , Issue.2 , pp. 155-166
    • Zieker, D.1
  • 15
    • 26444507854 scopus 로고    scopus 로고
    • The period length of fibroblast circadian gene expression varies widely among human individuals
    • Brown SA, et al. (2005) The period length of fibroblast circadian gene expression varies widely among human individuals. PLoS Biol 3(10):e338.
    • (2005) PLoS Biol , vol.3 , Issue.10
    • Brown, S.A.1
  • 16
    • 77957258439 scopus 로고    scopus 로고
    • Noninvasive method for assessing the human circadian clock using hair follicle cells
    • Akashi M, et al. (2010) Noninvasive method for assessing the human circadian clock using hair follicle cells. Proc Natl Acad Sci USA 107(35):15643-15648.
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.35 , pp. 15643-15648
    • Akashi, M.1
  • 17
    • 77952247107 scopus 로고    scopus 로고
    • Phenotypic effects of the circadian gene Cryptochrome 2 on cancer-related pathways
    • Hoffman AE, et al. (2010) Phenotypic effects of the circadian gene Cryptochrome 2 on cancer-related pathways. BMC Cancer 10:110.
    • (2010) BMC Cancer , vol.10 , pp. 110
    • Hoffman, A.E.1
  • 18
    • 66349107101 scopus 로고    scopus 로고
    • Harmonics of circadian gene transcription in mammals
    • Hughes ME, et al. (2009) Harmonics of circadian gene transcription in mammals. PLoS Genet 5(4):e1000442.
    • (2009) PLoS Genet , vol.5 , Issue.4
    • Hughes, M.E.1
  • 19
    • 79953281764 scopus 로고    scopus 로고
    • Circadian clock gene expression in brain regions of Alzheimer's disease patients and control subjects
    • Cermakian N, Lamont EW, Boudreau P, Boivin DB (2011) Circadian clock gene expression in brain regions of Alzheimer's disease patients and control subjects. J Biol Rhythms 26(2):160-170.
    • (2011) J Biol Rhythms , vol.26 , Issue.2 , pp. 160-170
    • Cermakian, N.1    Lamont, E.W.2    Boudreau, P.3    Boivin, D.B.4
  • 20
    • 34447534359 scopus 로고    scopus 로고
    • Day-night expression patterns of clock genes in the human pineal gland
    • DOI 10.1111/j.1600-079X.2007.00461.x
    • Ackermann K, Dehghani F, Bux R, Kauert G, Stehle JH (2007) Day-night expression patterns of clock genes in the human pineal gland. J Pineal Res 43(2):185-194. (Pubitemid 47077222)
    • (2007) Journal of Pineal Research , vol.43 , Issue.2 , pp. 185-194
    • Ackermann, K.1    Dehghani, F.2    Bux, R.3    Kauert, G.4    Stehle, J.H.5
  • 21
    • 33845572904 scopus 로고    scopus 로고
    • Pineal clock gene oscillation is disturbed in Alzheimer's disease, due to functional disconnection from the "master clock"
    • Wu YH, et al. (2006) Pineal clock gene oscillation is disturbed in Alzheimer's disease, due to functional disconnection from the "master clock". FASEB J 20(11):1874-1876.
    • (2006) FASEB J , vol.20 , Issue.11 , pp. 1874-1876
    • Wu, Y.H.1
  • 23
    • 0037474075 scopus 로고    scopus 로고
    • Circadian profile and photic regulation of clock genes in the suprachiasmatic nucleus of a diurnal mammal Arvicanthis ansorgei
    • DOI 10.1016/S0306-4522(02)00654-1
    • Caldelas I, Poirel VJ, Sicard B, Pévet P, Challet E (2003) Circadian profile and photic regulation of clock genes in the suprachiasmatic nucleus of a diurnal mammal Arvicanthis ansorgei. Neuroscience 116(2):583-591. (Pubitemid 36139928)
    • (2003) Neuroscience , vol.116 , Issue.2 , pp. 583-591
    • Caldelas, I.1    Poirel, V.-J.2    Sicard, B.3    Pevet, P.4    Challet, E.5
  • 24
    • 61949316255 scopus 로고    scopus 로고
    • Period gene expression in the diurnal degu (Octodon degus) differs from the nocturnal laboratory rat (Rattus norvegicus)
    • Vosko AM, Hagenauer MH, Hummer DL, Lee TM (2009) Period gene expression in the diurnal degu (Octodon degus) differs from the nocturnal laboratory rat (Rattus norvegicus). Am J Physiol Regul Integr Comp Physiol 296(2):R353-R361.
    • (2009) Am J Physiol Regul Integr Comp Physiol , vol.296 , Issue.2
    • Vosko, A.M.1    Hagenauer, M.H.2    Hummer, D.L.3    Lee, T.M.4
  • 25
    • 0033593306 scopus 로고    scopus 로고
    • Molecular bases for circadian clocks
    • Dunlap JC (1999) Molecular bases for circadian clocks. Cell 96(2):271-290.
    • (1999) Cell , vol.96 , Issue.2 , pp. 271-290
    • Dunlap, J.C.1
  • 26
    • 37649021073 scopus 로고    scopus 로고
    • Oxysterols: Novel biologic roles for the 21st century
    • Javitt NB (2008) Oxysterols: Novel biologic roles for the 21st century. Steroids 73(2):149-157.
    • (2008) Steroids , vol.73 , Issue.2 , pp. 149-157
    • Javitt, N.B.1
  • 27
    • 0036302041 scopus 로고    scopus 로고
    • The role of hypocretins (Orexins) in sleep regulation and narcolepsy
    • DOI 10.1146/annurev.neuro.25.112701.142826
    • Taheri S, Zeitzer JM, Mignot E (2002) The role of hypocretins (orexins) in sleep regulation and narcolepsy. Annu Rev Neurosci 25:283-313. (Pubitemid 34748019)
    • (2002) Annual Review of Neuroscience , vol.25 , pp. 283-313
    • Taheri, S.1    Zeitzer, J.M.2    Mignot, E.3
  • 31
    • 80054107382 scopus 로고    scopus 로고
    • Chronic unpredictable stress induces a reversible change of PER2 rhythm in the suprachiasmatic nucleus
    • Jiang WG, et al. (2011) Chronic unpredictable stress induces a reversible change of PER2 rhythm in the suprachiasmatic nucleus. Brain Res 1399:25-32.
    • (2011) Brain Res , vol.1399 , pp. 25-32
    • Jiang, W.G.1
  • 35
    • 0142121516 scopus 로고    scopus 로고
    • Exploration, normalization, and summaries of high density oligonucleotide array probe level data
    • Irizarry RA, et al. (2003) Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4(2):249-264.
    • (2003) Biostatistics , vol.4 , Issue.2 , pp. 249-264
    • Irizarry, R.A.1
  • 36
    • 12344280017 scopus 로고    scopus 로고
    • Summaries of Affymetrix GeneChip probe level data
    • Irizarry RA, et al. (2003) Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res 31(4):e15.
    • (2003) Nucleic Acids Res , vol.31 , Issue.4
    • Irizarry, R.A.1
  • 37
    • 1842607847 scopus 로고    scopus 로고
    • R Development Core Team R Foundation for Statistical Computing, Vienna
    • R Development Core Team (2005) R: A Language and Environment for Statistical Computing (R Foundation for Statistical Computing, Vienna).
    • (2005) R: A Language and Environment for Statistical Computing
  • 38
    • 75549090213 scopus 로고    scopus 로고
    • KEGG for representation and analysis of molecular networks involving diseases and drugs
    • Kanehisa M, Goto S, Furumichi M, Tanabe M, Hirakawa M (2010) KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res 38(Database issue):D355-D360.
    • (2010) Nucleic Acids Res , vol.38 , Issue.DATABASE ISSUE
    • Kanehisa, M.1    Goto, S.2    Furumichi, M.3    Tanabe, M.4    Hirakawa, M.5
  • 40
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang W, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4(1):44-57.
    • (2009) Nat Protoc , vol.4 , Issue.1 , pp. 44-57
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 41
    • 58349105009 scopus 로고    scopus 로고
    • LRpath: A logistic regression approach for identifying enriched biological groups in gene expression data
    • Sartor MA, Leikauf GD, Medvedovic M (2009) LRpath: A logistic regression approach for identifying enriched biological groups in gene expression data. Bioinformatics 25(2):211-217.
    • (2009) Bioinformatics , vol.25 , Issue.2 , pp. 211-217
    • Sartor, M.A.1    Leikauf, G.D.2    Medvedovic, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.