메뉴 건너뛰기




Volumn 26, Issue 2, 2010, Pages 155-166

Circadian expression of clock- and tumor suppressor genes in human oral mucosa

Author keywords

Circadian Gene Expression; Clock Gene; Microarray; Oral Mucosa; Tumor Suppressor

Indexed keywords

BETA ACTIN; CRYPTOCHROME 1; GENE PRODUCT; MESSENGER RNA; NOCTURNIN; PERIOD HOMOLOG 2; PROTEIN BMAL1; SMAD5 PROTEIN; TRANSCRIPTION FACTOR CLOCK; UNCLASSIFIED DRUG;

EID: 78049331321     PISSN: 10158987     EISSN: None     Source Type: Journal    
DOI: 10.1159/000320547     Document Type: Article
Times cited : (37)

References (47)
  • 1
    • 0028258994 scopus 로고
    • Negative feedback defining a circadian clock: Autoregulation of the clock gene frequency
    • Aronson BD, Johnson KA, Loros JJ, Dunlap JC: Negative feedback defining a circadian clock: autoregulation of the clock gene frequency. Science 1994;263:1578-84.
    • (1994) Science , vol.263 , pp. 1578-1584
    • Aronson, B.D.1    Johnson, K.A.2    Loros, J.J.3    Dunlap, J.C.4
  • 2
    • 0028946238 scopus 로고
    • Tripping along the trail to the molecular mechanisms of biological clocks
    • Hall JC: Tripping along the trail to the molecular mechanisms of biological clocks. Trends Neurosci 1995;18:230-40.
    • (1995) Trends Neurosci , vol.18 , pp. 230-240
    • Hall, J.C.1
  • 3
  • 4
    • 0037711399 scopus 로고    scopus 로고
    • The circadian clock: Pacemaker and tumour suppressor
    • Fu L, Lee CC: The circadian clock: pacemaker and tumour suppressor. Nat Rev Cancer 2003;3:350-61.
    • (2003) Nat Rev Cancer , vol.3 , pp. 350-361
    • Fu, L.1    Lee, C.C.2
  • 5
    • 0042490526 scopus 로고    scopus 로고
    • A clockwork web: Circadian timing in brain and periphery, in health and disease
    • Hastings MH, Reddy AB, Maywood ES: A clockwork web: circadian timing in brain and periphery, in health and disease. Nat Rev Neurosci 2003;4:649-61.
    • (2003) Nat Rev Neurosci , vol.4 , pp. 649-661
    • Hastings, M.H.1    Reddy, A.B.2    Maywood, E.S.3
  • 6
    • 0037194790 scopus 로고    scopus 로고
    • Coordination of circadian timing in mammals
    • Reppert SM, Weaver DR: Coordination of circadian timing in mammals. Nature 2002;418:935-41.
    • (2002) Nature , vol.418 , pp. 935-941
    • Reppert, S.M.1    Weaver, D.R.2
  • 7
    • 0037418219 scopus 로고    scopus 로고
    • The network of time: Understanding the molecular circadian system
    • Roenneberg T, Merrow M: The network of time: understanding the molecular circadian system. Curr Biol 2003;13:R198-R207.
    • (2003) Curr Biol , vol.13
    • Roenneberg, T.1    Merrow, M.2
  • 8
    • 0037184977 scopus 로고    scopus 로고
    • A web of circadian pacemakers
    • Schibler U, Sassone-Corsi P: A web of circadian pacemakers. Cell 2002;111:919-22.
    • (2002) Cell , vol.111 , pp. 919-922
    • Schibler, U.1    Sassone-Corsi, P.2
  • 11
    • 0037020198 scopus 로고    scopus 로고
    • The circadian gene Period2 plays an important role in tumor suppression and DNA damage response in vivo
    • Fu L, Pelicano H, Liu J, Huang P, Lee C: The circadian gene Period2 plays an important role in tumor suppression and DNA damage response in vivo. Cell 2002;111:41-50.
    • (2002) Cell , vol.111 , pp. 41-50
    • Fu, L.1    Pelicano, H.2    Liu, J.3    Huang, P.4    Lee, C.5
  • 12
    • 0035191826 scopus 로고    scopus 로고
    • Increased breast cancer risk among women who work predominantly at night
    • Hansen J: Increased breast cancer risk among women who work predominantly at night. Epidemiology 2001;12:74-7.
    • (2001) Epidemiology , vol.12 , pp. 74-77
    • Hansen, J.1
  • 14
    • 30344453348 scopus 로고    scopus 로고
    • Human intestinal circadian clock: Expression of clock genes in colonocytes lining the crypt
    • Pardini L, Kaeffer B, Trubuil A, Bourreille A, Galmiche JP: Human intestinal circadian clock: expression of clock genes in colonocytes lining the crypt. Chronobiol Int 2005;22:951-61.
    • (2005) Chronobiol Int , vol.22 , pp. 951-961
    • Pardini, L.1    Kaeffer, B.2    Trubuil, A.3    Bourreille, A.4    Galmiche, J.P.5
  • 15
    • 0021025846 scopus 로고
    • Chronobiology of the intestinal tract of the mouse
    • Scheving LE, Tsai TH, Scheving LA: Chronobiology of the intestinal tract of the mouse. Am J Anat 1983;168:433-65.
    • (1983) Am J Anat , vol.168 , pp. 433-465
    • Scheving, L.E.1    Tsai, T.H.2    Scheving, L.A.3
  • 17
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
    • Smyth GK: Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 2004;3:1027.
    • (2004) Stat Appl Genet Mol Biol , vol.3 , pp. 1027
    • Smyth, G.K.1
  • 18
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad BM, Irizarry RA, Astrand M, Speed TP: A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 2003;19:185-93.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 19
    • 0347093600 scopus 로고    scopus 로고
    • Identifying periodically expressed transcripts in microarray time series data
    • Wichert S, Fokianos K, Strimmer K: Identifying periodically expressed transcripts in microarray time series data. Bioinformatics 2004;20:5-20.
    • (2004) Bioinformatics , vol.20 , pp. 5-20
    • Wichert, S.1    Fokianos, K.2    Strimmer, K.3
  • 20
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y: Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Statist Soc B 1995;57:289-300.
    • (1995) J R Statist Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 21
    • 33746522228 scopus 로고    scopus 로고
    • Twenty-four-hour rhythmic gene expression in the rhesus macaque adrenal gland
    • Lemos DR, Downs JL, Urbanski HF: Twenty-four-hour rhythmic gene expression in the rhesus macaque adrenal gland. Mol Endocrinol 2006;20:1164-76.
    • (2006) Mol Endocrinol , vol.20 , pp. 1164-1176
    • Lemos, D.R.1    Downs, J.L.2    Urbanski, H.F.3
  • 22
    • 32144464541 scopus 로고    scopus 로고
    • Detecting periodic patterns in unevenly spaced gene expression time series using Lomb-Scargle periodograms
    • Glynn EF, Chen J, Mushegian AR: Detecting periodic patterns in unevenly spaced gene expression time series using Lomb-Scargle periodograms. Bioinformatics 2006;22:310-6.
    • (2006) Bioinformatics , vol.22 , pp. 310-316
    • Glynn, E.F.1    Chen, J.2    Mushegian, A.R.3
  • 23
    • 0036581160 scopus 로고    scopus 로고
    • Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR
    • Pfaffl MW, Horgan GW, Dempfle L: Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res 2002;30:e36.
    • (2002) Nucleic Acids Res , vol.30
    • Pfaffl, M.W.1    Horgan, G.W.2    Dempfle, L.3
  • 24
    • 33744823251 scopus 로고    scopus 로고
    • Glucocorticoids suppress tumor angiogenesis and in vivo growth of prostate cancer cells
    • Yano A, Fujii Y, Iwai A, Kageyama Y, Kihara K: Glucocorticoids suppress tumor angiogenesis and in vivo growth of prostate cancer cells. Clin Cancer Res 2006;12(10):3003-9.
    • (2006) Clin Cancer Res , vol.12 , Issue.10 , pp. 3003-3009
    • Yano, A.1    Fujii, Y.2    Iwai, A.3    Kageyama, Y.4    Kihara, K.5
  • 27
    • 0033593306 scopus 로고    scopus 로고
    • Molecular bases for circadian clocks
    • Dunlap JC: Molecular bases for circadian clocks. Cell 1999;96(2):271-90.
    • (1999) Cell , vol.96 , Issue.2 , pp. 271-290
    • Dunlap, J.C.1
  • 29
    • 0035047945 scopus 로고    scopus 로고
    • Molecular analysis of mammalian circadian rhythms
    • Reppert SM, Weaver DR: Molecular analysis of mammalian circadian rhythms. Annu Rev Physiol 2001;63:647-76.
    • (2001) Annu Rev Physiol , vol.63 , pp. 647-676
    • Reppert, S.M.1    Weaver, D.R.2
  • 30
    • 56849106311 scopus 로고    scopus 로고
    • NOC out the fat: A short review of the circadian deadenylase Nocturnin
    • Douris N, Green CB: NOC out the fat: a short review of the circadian deadenylase Nocturnin. Ann Med 2008;40(8):622-6.
    • (2008) Ann Med , vol.40 , Issue.8 , pp. 622-626
    • Douris, N.1    Green, C.B.2
  • 32
    • 0030984168 scopus 로고    scopus 로고
    • Smad5, a tumor suppressor candidate at 5q31.1, is hemizygously lost and not mutated in the retained allele in human leukemia cell line HL60
    • Zavadil J, Brezinova J, Svoboda P, Zemanova Z, Michalova K: Smad5, a tumor suppressor candidate at 5q31.1, is hemizygously lost and not mutated in the retained allele in human leukemia cell line HL60. Leukemia 1997;11:1187-92.
    • (1997) Leukemia , vol.11 , pp. 1187-1192
    • Zavadil, J.1    Brezinova, J.2    Svoboda, P.3    Zemanova, Z.4    Michalova, K.5
  • 33
    • 71949103390 scopus 로고    scopus 로고
    • Smad1-Smad5 ovarian conditional knockout mice develop a disease profile similar to the juvenile form of human granulosa cell tumors
    • Middlebrook BS, Eldin K, Li X, Shivasankaran S, Pangas SA: Smad1-Smad5 ovarian conditional knockout mice develop a disease profile similar to the juvenile form of human granulosa cell tumors. Endocrinology 2009;150:5208-17.
    • (2009) Endocrinology , vol.150 , pp. 5208-5217
    • Middlebrook, B.S.1    Eldin, K.2    Li, X.3    Shivasankaran, S.4    Pangas, S.A.5
  • 36
    • 0032914652 scopus 로고    scopus 로고
    • Circadian variation in the expression of cell-cycle proteins in human oral epithelium
    • Bjarnason GA, Jordan RC, Sothern RB: Circadian variation in the expression of cell-cycle proteins in human oral epithelium. Am J Pathol 1999;154:613-22.
    • (1999) Am J Pathol , vol.154 , pp. 613-622
    • Bjarnason, G.A.1    Jordan, R.C.2    Sothern, R.B.3
  • 37
    • 62849106294 scopus 로고    scopus 로고
    • A large scale shRNA barcode screen identifies the circadian clock component ARNTL as putative regulator of the p53 tumor suppressor pathway
    • Mullenders J, Fabius AW, Madiredjo M, Bernards R, Beijersbergen RL: A large scale shRNA barcode screen identifies the circadian clock component ARNTL as putative regulator of the p53 tumor suppressor pathway. PLoS One 2009;4:e4798.
    • (2009) PLoS One , vol.4
    • Mullenders, J.1    Fabius, A.W.2    Madiredjo, M.3    Bernards, R.4    Beijersbergen, R.L.5
  • 39
    • 0141889955 scopus 로고    scopus 로고
    • Control mechanism of the circadian clock for timing of cell division in vivo
    • Matsuo T, Yamaguchi S, Mitsui S, Emi A, Shimoda F, Okamura H: Control mechanism of the circadian clock for timing of cell division in vivo. Science 2003;302:255-9.
    • (2003) Science , vol.302 , pp. 255-259
    • Matsuo, T.1    Yamaguchi, S.2    Mitsui, S.3    Emi, A.4    Shimoda, F.5    Okamura, H.6
  • 40
    • 35448985252 scopus 로고    scopus 로고
    • Expression of the circadian clock genes Per1 and Per2 in sporadic and familial breast tumors
    • Winter SL, Bosnoyan-Collins L, Pinnaduwage D, Andrulis IL: Expression of the circadian clock genes Per1 and Per2 in sporadic and familial breast tumors. Neoplasia 2007;9:797-800.
    • (2007) Neoplasia , vol.9 , pp. 797-800
    • Winter, S.L.1    Bosnoyan-Collins, L.2    Pinnaduwage, D.3    Andrulis, I.L.4
  • 41
    • 68949135495 scopus 로고    scopus 로고
    • Down regulation of circadian clock gene Period 2 accelerates breast cancer growth by altering its daily growth rhythm
    • Yang X, Wood PA, Oh EY, Du-Quiton J, Ansell CM, Hrushesky WJ: Down regulation of circadian clock gene Period 2 accelerates breast cancer growth by altering its daily growth rhythm. Breast Cancer Res Treat 2009;117:423-31.
    • (2009) Breast Cancer Res Treat , vol.117 , pp. 423-431
    • Yang, X.1    Wood, P.A.2    Oh, E.Y.3    Du-Quiton, J.4    Ansell, C.M.5    Hrushesky, W.J.6
  • 42
    • 0037316406 scopus 로고    scopus 로고
    • Nocturnin, a deadenylase in Xenopus laevis retina: A mechanism for posttranscriptional control of circadian-related mRNA
    • Baggs JE, Green CB. Nocturnin, a deadenylase in Xenopus laevis retina: a mechanism for posttranscriptional control of circadian-related mRNA. Curr Biol 2003;13:189-98.
    • (2003) Curr Biol , vol.13 , pp. 189-198
    • Baggs, J.E.1    Green, C.B.2
  • 43
    • 34247373509 scopus 로고    scopus 로고
    • Immediate early response of the circadian polyA ribonuclease nocturnin to two extracellular stimuli
    • Garbarino-Pico E, Niu S, Rollag MD, Strayer CA, Besharse JC, Green CB: Immediate early response of the circadian polyA ribonuclease nocturnin to two extracellular stimuli. RNA 2007;13:745-55.
    • (2007) RNA , vol.13 , pp. 745-755
    • Garbarino-Pico, E.1    Niu, S.2    Rollag, M.D.3    Strayer, C.A.4    Besharse, J.C.5    Green, C.B.6
  • 45
  • 47
    • 0032545944 scopus 로고    scopus 로고
    • HSmad5 gene, a human hSmad family member: Its full length cDNA, genomic structure, promotor region and mutation analysis in human tumors
    • Gemma A, Hagiwara K, Vincent F, Ke Y, Hancock AR, Nagashima M, Bennett WP, Harris CC: hSmad5 gene, a human hSmad family member: its full length cDNA, genomic structure, promotor region and mutation analysis in human tumors. Oncogene 1998;16:951-6.
    • (1998) Oncogene , vol.16 , pp. 951-956
    • Gemma, A.1    Hagiwara, K.2    Vincent, F.3    Ke, Y.4    Hancock, A.R.5    Nagashima, M.6    Bennett, W.P.7    Harris, C.C.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.